ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2n10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 3e-46
2dbj|AK101549.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 3e-46
3gb|AY104938.1| Zea mays PCO129661 mRNA sequence 172 1e-39
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
5dbj|AP006054.3| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
6dbj|AP005852.2| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
7ref|XM_467509.1| Oryza sativa (japonica cultivar-group), mRNA 54 7e-04
8ref|XM_506942.1| PREDICTED Oryza sativa (japonica cultivar-group... 54 7e-04
9dbj|AK121803.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 7e-04
10dbj|AK105451.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 7e-04
11dbj|AK059211.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.040
13dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.040
14gb|AC010595.7| Homo sapiens chromosome 5 clone CTC-480C2, comple... 46 0.16
15emb|BX571685.2| Mouse DNA sequence from clone RP23-29D24 on chro... 46 0.16
16gb|AC005612.1| Homo sapiens chromosome 21, P1 clone LBL#8 (LBNL ... 44 0.63
17emb|AL163285.2|HS21C085 Homo sapiens chromosome 21 segment HS21C085 44 0.63
18emb|AL354997.17| Human DNA sequence from clone RP11-309H8 on chr... 44 0.63
19emb|AL109623.9|HSDJ900E8 Human DNA sequence from clone RP5-900E8... 44 0.63
20emb|AL954241.1| Pan troglodytes chromosome 22 clone RP43-181I17 ... 44 0.63
21gb|AC023926.6| Homo sapiens chromosome 8, clone RP11-9P20, compl... 44 0.63
22gb|AC020918.6| Homo sapiens chromosome 5 clone CTD-2020C3, compl... 44 0.63
23gb|AC018756.5| Homo sapiens chromosome 5 clone CTC-534K6, comple... 44 0.63
24gb|AC008782.6|AC008782 Homo sapiens chromosome 5 clone CTD-2026D... 44 0.63
25gb|AC016608.5|AC016608 Homo sapiens chromosome 5 clone CTD-2170F... 44 0.63
26gb|AC108125.4| Homo sapiens chromosome 16 clone RP11-58C22, comp... 44 0.63
27gb|AC007240.2| Homo sapiens BAC clone RP11-83M8 from 2, complete... 44 0.63
28emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, co... 44 0.63
29emb|BX088551.7| Zebrafish DNA sequence from clone CH211-106A19 i... 44 0.63
30dbj|AP001894.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 44 0.63
31emb|AL773571.1|HS87D5 Homo sapiens chromosome 21 from cosmid LL2... 44 0.63
32gb|L35673.1|HUM8DC18Z Homo sapiens (subclone H8 9_b8 from P1 35 ... 44 0.63
33dbj|AP001610.1| Homo sapiens genomic DNA, chromosome 21, clone:C... 44 0.63
34dbj|AP001609.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 44 0.63
35gb|AC115357.5| Mus musculus BAC clone RP23-81J4 from chromosome ... 42 2.5
36gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence 42 2.5
37gb|AC073585.8| Homo sapiens chromosome 10 clone RP11-564D11, com... 42 2.5
38dbj|AK122899.1| Homo sapiens cDNA FLJ16565 fis, clone SYNOV40077... 42 2.5
39gb|AC106854.5| Homo sapiens chromosome 18, clone CTD-2302G2, com... 42 2.5
40gb|AC010634.6| Homo sapiens chromosome 5 clone CTD-2318H23, comp... 42 2.5
41gb|AC091043.12| Homo sapiens chromosome 18, clone RP11-595B24, c... 42 2.5
42gb|AC009949.9| Homo sapiens BAC clone RP11-69J7 from 2, complete... 42 2.5
43gb|AC010642.5|AC010642 Homo sapiens chromosome 19 clone LLNLR-24... 42 2.5
44gb|L44606.1|MQSGAAR Aedes aegypti gamma-aminobutyric acid recept... 42 2.5
45emb|AL672239.8| Mouse DNA sequence from clone RP23-144D15 on chr... 42 2.5
46ref|NM_106268.2| Arabidopsis thaliana unknown protein AT1G76185 ... 40 9.8
47ref|NM_185683.1| Oryza sativa (japonica cultivar-group), Ozsa803... 40 9.8
48gb|BC061836.1| Rattus norvegicus protein kinase N1, mRNA (cDNA c... 40 9.8
49gb|AC114637.9| Mus musculus chromosome 3, clone RP24-119G15, com... 40 9.8
50gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete se... 40 9.8
51emb|CR388066.21| Zebrafish DNA sequence from clone CH211-67H20 i... 40 9.8
52ref|XM_805227.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.8
53gb|AC073590.5| Mus musculus chromosome 12 clone RP23-206K17, com... 40 9.8
54gb|AC023792.12| Homo sapiens 3 BAC CTC-503A18 (Roswell Park Canc... 40 9.8
55gb|AC135253.2| Homo sapiens 3 BAC RP11-324L7 (Roswell Park Cance... 40 9.8
56gb|AC104373.4| Homo sapiens chromosome 8, clone RP11-1144P22, co... 40 9.8
57gb|AC007031.2| Homo sapiens BAC clone RP11-17I10 from 7, complet... 40 9.8
58emb|AL589826.12| Human DNA sequence from clone RP11-67P15 on chr... 40 9.8
59gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 9.8
60emb|AL357493.8| Human DNA sequence from clone RP11-439A17 on chr... 40 9.8
61emb|AL133476.17| Human DNA sequence from clone RP11-156G14 on ch... 40 9.8
62gb|AC008534.7| Homo sapiens chromosome 5 clone CTC-484P3, comple... 40 9.8
63emb|AL662982.3|OSJN00184 Oryza sativa genomic DNA, chromosome 4,... 40 9.8
64emb|AL034583.1|SPAC637 S.pombe chromosome I cosmid c637 40 9.8
65emb|CR318650.11| Zebrafish DNA sequence from clone CH211-174D12 ... 40 9.8
66gb|AC104012.11| Homo sapiens chromosome 8, clone RP11-281N10, co... 40 9.8
67gb|AC104796.4| Homo sapiens BAC clone RP11-318E19 from 4, comple... 40 9.8
68gb|AC020980.6| Homo sapiens chromosome 5 clone RPCI-1_167G20, co... 40 9.8
69gb|AC096677.2| Homo sapiens chromosome 1 clone RP11-134G8, compl... 40 9.8
70gb|AC008411.5| Homo sapiens chromosome 5 clone CTC-281B15, compl... 40 9.8
71gb|AC022113.6| Homo sapiens chromosome 5 clone CTC-461F20, compl... 40 9.8
72gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chrom... 40 9.8
73gb|L35634.1|RATPAK1A Rattus norvegicus cardiolipin/protease-acti... 40 9.8
74gb|AC012312.9| Homo sapiens chromosome 5 clone CTC-558O19, compl... 40 9.8
75gb|AF047663.3| Caenorhabditis elegans cosmid W09G12, complete se... 40 9.8
76gb|AC026436.4| Homo sapiens chromosome 5 clone CTD-2248H3, compl... 40 9.8
77ref|NM_001020048.1| Schizosaccharomyces pombe 972h- hypothetical... 40 9.8
78dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
79emb|BX817585.1|CNS0AB1P Arabidopsis thaliana Full-length cDNA Co... 40 9.8
80gb|AC159103.1| Mus musculus BAC clone RP23-424O13 from chromosom... 40 9.8
81gb|AC092114.3| Homo sapiens chromosome 16 clone CTD-2009A10, com... 40 9.8
82gb|AC009104.10| Homo sapiens chromosome 16 clone RP11-44L9, comp... 40 9.8
83gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana... 40 9.8
84ref|NM_017175.1| Rattus norvegicus protein kinase N1 (Pkn1), mRNA 40 9.8
85gb|AY086332.1| Arabidopsis thaliana clone 24004 mRNA, complete s... 40 9.8
86dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
87emb|BX248129.5| Zebrafish DNA sequence from clone CH211-196M16 i... 40 9.8
88gb|AC115848.10| Mus musculus chromosome 3, clone RP24-248L23, co... 40 9.8
89gb|AF047464.1|AF047464 Schizosaccharomyces pombe Tpr1 (tpr1) mRN... 40 9.8
90emb|BX296546.6| Zebrafish DNA sequence from clone CH211-234P1 in... 40 9.8
91emb|CT025748.16| Zebrafish DNA sequence from clone CH73-166N24 i... 40 9.8
92emb|CT025691.7| Zebrafish DNA sequence from clone CH211-206I4 in... 40 9.8
93tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy ... 40 9.8
94gb|AE000512.1| Thermotoga maritima MSB8, complete genome 40 9.8
95emb|AL009227.1|SPAC27D7 S.pombe chromosome I cosmid c27D7 40 9.8
96emb|AM041147.2| Mus musculus chromosome 12 BAC clone 407i12 40 9.8
97emb|AJ972403.2| Mus musculus chromosome 12 BAC clone 4k8 40 9.8
98emb|AJ972404.2| Mus musculus chromosome 12 BAC clone 4k8 40 9.8
99emb|AL604045.7| Mouse DNA sequence from clone RP23-418O11 on chr... 40 9.8
100dbj|D26180.1|RATPKNA Rat mRNA for novel protein kinase PKN, comp... 40 9.8 
>dbj|AK102553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097E23, full
            insert sequence
          Length = 2305

 Score =  194 bits (98), Expect = 3e-46
 Identities = 154/173 (89%)
 Strand = Plus / Minus

                                                                        
Query: 544  ggtctgttcgggctgactcgcgatccaaatggcccttcatggtcagtgttcagtttctgc 603
            |||||||| ||||| || || || |||||||||||||||||||| ||||||||||  |||
Sbjct: 1789 ggtctgttagggctcacacgtgaaccaaatggcccttcatggtcggtgttcagttgttgc 1730

                                                                        
Query: 604  tcgacatagcgcttttgttccttcattcttttcttgncttcttctctttcctccctcagc 663
            ||||  ||||||||||||||| |||||||||||||  ||||||| ||||||| ||| |||
Sbjct: 1729 tcgatgtagcgcttttgttccctcattcttttcttatcttcttccctttcctgccttagc 1670

                                                                 
Query: 664  ataacatactcatccaacatagctagaagcggtacaccatcatacataaagga 716
            || ||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1669 atgacatattcatccaacatagctagaagaggtacaccatcatacataaagga 1617



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 418  ctcttgctgtccttccccccagaccttccattctgctgaccgctgattgacagtcttctg 477
            |||||||  ||||| || ||||||||||| ||||| ||||||||||  || ||||| || 
Sbjct: 1912 ctcttgccatcctttcctccagaccttccgttctggtgaccgctgaccgaaagtctccta 1853

                          
Query: 478  ctcggaggagtgcc 491
             |||||||||||||
Sbjct: 1852 ttcggaggagtgcc 1839



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 203  ctcctcgctacaaacacagcacattatattagcacaaaacaatggaaa 250
            ||||||||||||||||||  |||||||||   |||||| |||||||||
Sbjct: 2107 ctcctcgctacaaacacaatacattatatagccacaaatcaatggaaa 2060
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>dbj|AK101549.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048O08, full
            insert sequence
          Length = 2236

 Score =  194 bits (98), Expect = 3e-46
 Identities = 154/173 (89%)
 Strand = Plus / Minus

                                                                        
Query: 544  ggtctgttcgggctgactcgcgatccaaatggcccttcatggtcagtgttcagtttctgc 603
            |||||||| ||||| || || || |||||||||||||||||||| ||||||||||  |||
Sbjct: 1724 ggtctgttagggctcacacgtgaaccaaatggcccttcatggtcggtgttcagttgttgc 1665

                                                                        
Query: 604  tcgacatagcgcttttgttccttcattcttttcttgncttcttctctttcctccctcagc 663
            ||||  ||||||||||||||| |||||||||||||  ||||||| ||||||| ||| |||
Sbjct: 1664 tcgatgtagcgcttttgttccctcattcttttcttatcttcttccctttcctgccttagc 1605

                                                                 
Query: 664  ataacatactcatccaacatagctagaagcggtacaccatcatacataaagga 716
            || ||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1604 atgacatattcatccaacatagctagaagaggtacaccatcatacataaagga 1552



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 418  ctcttgctgtccttccccccagaccttccattctgctgaccgctgattgacagtcttctg 477
            |||||||  ||||| || ||||||||||| ||||| ||||||||||  || ||||| || 
Sbjct: 1847 ctcttgccatcctttcctccagaccttccgttctggtgaccgctgaccgaaagtctccta 1788

                          
Query: 478  ctcggaggagtgcc 491
             |||||||||||||
Sbjct: 1787 ttcggaggagtgcc 1774



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 203  ctcctcgctacaaacacagcacattatattagcacaaaacaatggaaa 250
            ||||||||||||||||||  |||||||||   |||||| |||||||||
Sbjct: 2042 ctcctcgctacaaacacaatacattatatagccacaaatcaatggaaa 1995
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>gb|AY104938.1| Zea mays PCO129661 mRNA sequence
          Length = 1583

 Score =  172 bits (87), Expect = 1e-39
 Identities = 140/158 (88%)
 Strand = Plus / Minus

                                                                       
Query: 559 actcgcgatccaaatggcccttcatggtcagtgttcagtttctgctcgacatagcgcttt 618
           ||||||||||| |||||||||||||| || ||||||| || |||||| |  |||||||||
Sbjct: 979 actcgcgatccgaatggcccttcatgatcggtgttcaattgctgctcaatgtagcgcttt 920

                                                                       
Query: 619 tgttccttcattcttttcttgncttcttctctttcctccctcagcataacatactcatcc 678
           ||||||  ||||||||||||  ||||||| ||||| |  || ||||||||||||||||||
Sbjct: 919 tgttcccgcattcttttcttttcttcttccctttcttgtctgagcataacatactcatcc 860

                                                 
Query: 679 aacatagctagaagcggtacaccatcatacataaagga 716
           |||||||||||||| |||||||||||||||||||||||
Sbjct: 859 aacatagctagaagaggtacaccatcatacataaagga 822
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  119 bits (60), Expect = 1e-23
 Identities = 83/91 (91%)
 Strand = Plus / Plus

                                                                            
Query: 626      tcattcttttcttgncttcttctctttcctccctcagcataacatactcatccaacatag 685
                |||||||||||||  ||||||| ||||||| ||| ||||| ||||| |||||||||||||
Sbjct: 11540596 tcattcttttcttatcttcttccctttcctgccttagcatgacatattcatccaacatag 11540655

                                               
Query: 686      ctagaagcggtacaccatcatacataaagga 716
                ||||||| |||||||||||||||||||||||
Sbjct: 11540656 ctagaagaggtacaccatcatacataaagga 11540686



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                            
Query: 544      ggtctgttcgggctgactcgcgatccaaatggcccttcatggtcagtgttcagtttctgc 603
                |||||||| ||||| || || || |||||||||||||||||||| ||||||||||  |||
Sbjct: 11540178 ggtctgttagggctcacacgtgaaccaaatggcccttcatggtcggtgttcagttgttgc 11540237

                                      
Query: 604      tcgacatagcgcttttgttcct 625
                ||||  ||||||||||||||||
Sbjct: 11540238 tcgatgtagcgcttttgttcct 11540259



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                            
Query: 418      ctcttgctgtccttccccccagaccttccattctgctgaccgctgattgacagtcttctg 477
                |||||||  ||||| || ||||||||||| ||||| ||||||||||  || ||||| || 
Sbjct: 11540055 ctcttgccatcctttcctccagaccttccgttctggtgaccgctgaccgaaagtctccta 11540114

                              
Query: 478      ctcggaggagtgcc 491
                 |||||||||||||
Sbjct: 11540115 ttcggaggagtgcc 11540128



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                                
Query: 203      ctcctcgctacaaacacagcacattatattagcacaaaacaatggaaa 250
                ||||||||||||||||||  |||||||||   |||||| |||||||||
Sbjct: 11539860 ctcctcgctacaaacacaatacattatatagccacaaatcaatggaaa 11539907



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 664     ataacatactcatccaacat 683
               ||||||||||||||||||||
Sbjct: 3815211 ataacatactcatccaacat 3815230
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>dbj|AP006054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0417E03
          Length = 133019

 Score =  119 bits (60), Expect = 1e-23
 Identities = 83/91 (91%)
 Strand = Plus / Plus

                                                                          
Query: 626    tcattcttttcttgncttcttctctttcctccctcagcataacatactcatccaacatag 685
              |||||||||||||  ||||||| ||||||| ||| ||||| ||||| |||||||||||||
Sbjct: 109839 tcattcttttcttatcttcttccctttcctgccttagcatgacatattcatccaacatag 109898

                                             
Query: 686    ctagaagcggtacaccatcatacataaagga 716
              ||||||| |||||||||||||||||||||||
Sbjct: 109899 ctagaagaggtacaccatcatacataaagga 109929



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                          
Query: 544    ggtctgttcgggctgactcgcgatccaaatggcccttcatggtcagtgttcagtttctgc 603
              |||||||| ||||| || || || |||||||||||||||||||| ||||||||||  |||
Sbjct: 109421 ggtctgttagggctcacacgtgaaccaaatggcccttcatggtcggtgttcagttgttgc 109480

                                    
Query: 604    tcgacatagcgcttttgttcct 625
              ||||  ||||||||||||||||
Sbjct: 109481 tcgatgtagcgcttttgttcct 109502



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                          
Query: 418    ctcttgctgtccttccccccagaccttccattctgctgaccgctgattgacagtcttctg 477
              |||||||  ||||| || ||||||||||| ||||| ||||||||||  || ||||| || 
Sbjct: 109298 ctcttgccatcctttcctccagaccttccgttctggtgaccgctgaccgaaagtctccta 109357

                            
Query: 478    ctcggaggagtgcc 491
               |||||||||||||
Sbjct: 109358 ttcggaggagtgcc 109371



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 203    ctcctcgctacaaacacagcacattatattagcacaaaacaatggaaa 250
              ||||||||||||||||||  |||||||||   |||||| |||||||||
Sbjct: 109103 ctcctcgctacaaacacaatacattatatagccacaaatcaatggaaa 109150
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>dbj|AP005852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0414E10
          Length = 141760

 Score =  119 bits (60), Expect = 1e-23
 Identities = 83/91 (91%)
 Strand = Plus / Plus

                                                                         
Query: 626   tcattcttttcttgncttcttctctttcctccctcagcataacatactcatccaacatag 685
             |||||||||||||  ||||||| ||||||| ||| ||||| ||||| |||||||||||||
Sbjct: 18482 tcattcttttcttatcttcttccctttcctgccttagcatgacatattcatccaacatag 18541

                                            
Query: 686   ctagaagcggtacaccatcatacataaagga 716
             ||||||| |||||||||||||||||||||||
Sbjct: 18542 ctagaagaggtacaccatcatacataaagga 18572



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                         
Query: 544   ggtctgttcgggctgactcgcgatccaaatggcccttcatggtcagtgttcagtttctgc 603
             |||||||| ||||| || || || |||||||||||||||||||| ||||||||||  |||
Sbjct: 18064 ggtctgttagggctcacacgtgaaccaaatggcccttcatggtcggtgttcagttgttgc 18123

                                   
Query: 604   tcgacatagcgcttttgttcct 625
             ||||  ||||||||||||||||
Sbjct: 18124 tcgatgtagcgcttttgttcct 18145



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                         
Query: 418   ctcttgctgtccttccccccagaccttccattctgctgaccgctgattgacagtcttctg 477
             |||||||  ||||| || ||||||||||| ||||| ||||||||||  || ||||| || 
Sbjct: 17941 ctcttgccatcctttcctccagaccttccgttctggtgaccgctgaccgaaagtctccta 18000

                           
Query: 478   ctcggaggagtgcc 491
              |||||||||||||
Sbjct: 18001 ttcggaggagtgcc 18014



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 203   ctcctcgctacaaacacagcacattatattagcacaaaacaatggaaa 250
             ||||||||||||||||||  |||||||||   |||||| |||||||||
Sbjct: 17746 ctcctcgctacaaacacaatacattatatagccacaaatcaatggaaa 17793
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>ref|XM_467509.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2291

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 616  ttttgttccttcattcttttcttgncttcttctctttcctccctcagcataacatactca 675
            |||||||||  ||||||||||||  ||||||| || || | ||| || || |||||||||
Sbjct: 1738 ttttgttcccgcattcttttcttctcttcttccctctcttgcctaagaatgacatactca 1679

                                                  
Query: 676  tccaacatagctagaagcggtacaccatcatacataaa 713
            |||| ||| ||||| || |  ||||| |||||||||||
Sbjct: 1678 tccagcattgctagcagagaaacaccgtcatacataaa 1641
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>ref|XM_506942.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_D06.15 mRNA
          Length = 2300

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 616  ttttgttccttcattcttttcttgncttcttctctttcctccctcagcataacatactca 675
            |||||||||  ||||||||||||  ||||||| || || | ||| || || |||||||||
Sbjct: 1752 ttttgttcccgcattcttttcttctcttcttccctctcttgcctaagaatgacatactca 1693

                                                  
Query: 676  tccaacatagctagaagcggtacaccatcatacataaa 713
            |||| ||| ||||| || |  ||||| |||||||||||
Sbjct: 1692 tccagcattgctagcagagaaacaccgtcatacataaa 1655
to top
>dbj|AK121803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097J24, full
            insert sequence
          Length = 2299

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 616  ttttgttccttcattcttttcttgncttcttctctttcctccctcagcataacatactca 675
            |||||||||  ||||||||||||  ||||||| || || | ||| || || |||||||||
Sbjct: 1751 ttttgttcccgcattcttttcttctcttcttccctctcttgcctaagaatgacatactca 1692

                                                  
Query: 676  tccaacatagctagaagcggtacaccatcatacataaa 713
            |||| ||| ||||| || |  ||||| |||||||||||
Sbjct: 1691 tccagcattgctagcagagaaacaccgtcatacataaa 1654
to top
>dbj|AK105451.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-C02, full
            insert sequence
          Length = 2291

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 616  ttttgttccttcattcttttcttgncttcttctctttcctccctcagcataacatactca 675
            |||||||||  ||||||||||||  ||||||| || || | ||| || || |||||||||
Sbjct: 1738 ttttgttcccgcattcttttcttctcttcttccctctcttgcctaagaatgacatactca 1679

                                                  
Query: 676  tccaacatagctagaagcggtacaccatcatacataaa 713
            |||| ||| ||||| || |  ||||| |||||||||||
Sbjct: 1678 tccagcattgctagcagagaaacaccgtcatacataaa 1641
to top
>dbj|AK059211.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B12, full
            insert sequence
          Length = 1719

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 688  agaagcggtacaccatcatacataaagga 716
            ||||| |||||||||||||||||||||||
Sbjct: 1641 agaaggggtacaccatcatacataaagga 1613
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                            
Query: 627      cattcttttcttgncttcttctctttcctccctcagcataacatactcatccaacatagc 686
                ||||||||||||  ||||||| || || | ||| || || ||||||||||||| ||| ||
Sbjct: 29899200 cattcttttcttctcttcttccctctcttgcctaagaatgacatactcatccagcattgc 29899141

                                           
Query: 687      tagaagcggtacaccatcatacataaa 713
                ||| || |  ||||| |||||||||||
Sbjct: 29899140 tagcagagaaacaccgtcatacataaa 29899114
to top
>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_D06
          Length = 112768

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                         
Query: 627   cattcttttcttgncttcttctctttcctccctcagcataacatactcatccaacatagc 686
             ||||||||||||  ||||||| || || | ||| || || ||||||||||||| ||| ||
Sbjct: 56165 cattcttttcttctcttcttccctctcttgcctaagaatgacatactcatccagcattgc 56106

                                        
Query: 687   tagaagcggtacaccatcatacataaa 713
             ||| || |  ||||| |||||||||||
Sbjct: 56105 tagcagagaaacaccgtcatacataaa 56079
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>gb|AC010595.7| Homo sapiens chromosome 5 clone CTC-480C2, complete sequence
          Length = 179484

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 614    gcttttgttccttcattcttttcttgnctt 643
              ||||||||| |||||||||||||||| |||
Sbjct: 122436 gcttttgttgcttcattcttttcttgcctt 122407
to top
>emb|BX571685.2| Mouse DNA sequence from clone RP23-29D24 on chromosome 4, complete
             sequence
          Length = 54569

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 616   ttttgttccttcattcttttctt 638
             |||||||||||||||||||||||
Sbjct: 18670 ttttgttccttcattcttttctt 18648
to top
>gb|AC005612.1| Homo sapiens chromosome 21, P1 clone LBL#8 (LBNL H8), complete sequence
          Length = 60904

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 614   gcttttgttccttcattcttttcttg 639
             ||||||||| ||||||||||||||||
Sbjct: 49586 gcttttgttgcttcattcttttcttg 49611
to top
>emb|AL163285.2|HS21C085 Homo sapiens chromosome 21 segment HS21C085
          Length = 340000

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 614    gcttttgttccttcattcttttcttg 639
              ||||||||| ||||||||||||||||
Sbjct: 269939 gcttttgttgcttcattcttttcttg 269964
to top
>emb|AL354997.17| Human DNA sequence from clone RP11-309H8 on chromosome 13 Contains two
              novel genes and a novel RING finger protein pseudogene,
              complete sequence
          Length = 156077

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 614    gcttttgttccttcattcttttcttg 639
              ||||||||| ||||||||||||||||
Sbjct: 121235 gcttttgtttcttcattcttttcttg 121260
to top
>emb|AL109623.9|HSDJ900E8 Human DNA sequence from clone RP5-900E8 on chromosome Xq25-27.1
             Contains the 5' end of the GPC4 gene for glypican 4 and a
             CpG island, complete sequence
          Length = 101259

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 614   gcttttgttccttcattcttttcttg 639
             ||||||||| ||||||||||||||||
Sbjct: 31037 gcttttgttgcttcattcttttcttg 31012
to top
>emb|AL954241.1| Pan troglodytes chromosome 22 clone RP43-181I17 map 22q22.2-q22.3,
              complete sequence
          Length = 212865

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 614    gcttttgttccttcattcttttcttg 639
              ||||||||| ||||||||||||||||
Sbjct: 131901 gcttttgttgcttcattcttttcttg 131926
to top
>gb|AC023926.6| Homo sapiens chromosome 8, clone RP11-9P20, complete sequence
          Length = 151353

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 633   tttcttgncttcttctctttcctcc 657
             ||||||| |||||||||||||||||
Sbjct: 93711 tttcttggcttcttctctttcctcc 93735
to top
>gb|AC020918.6| Homo sapiens chromosome 5 clone CTD-2020C3, complete sequence
          Length = 175425

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 614   gcttttgttccttcattcttttcttg 639
             ||||||||| ||||||||||||||||
Sbjct: 49309 gcttttgttgcttcattcttttcttg 49284
to top
>gb|AC018756.5| Homo sapiens chromosome 5 clone CTC-534K6, complete sequence
          Length = 122005

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 614   gcttttgttccttcattcttttcttg 639
             ||||||||| ||||||||||||||||
Sbjct: 17080 gcttttgttgcttcattcttttcttg 17055
to top
>gb|AC008782.6|AC008782 Homo sapiens chromosome 5 clone CTD-2026D23, complete sequence
          Length = 167275

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 614   gcttttgttccttcattcttttcttg 639
             ||||||||| ||||||||||||||||
Sbjct: 32496 gcttttgttgcttcattcttttcttg 32521
to top
>gb|AC016608.5|AC016608 Homo sapiens chromosome 5 clone CTD-2170F21, complete sequence
          Length = 113626

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 614   gcttttgttccttcattcttttcttg 639
             ||||||||| ||||||||||||||||
Sbjct: 81431 gcttttgttgcttcattcttttcttg 81456
to top
>gb|AC108125.4| Homo sapiens chromosome 16 clone RP11-58C22, complete sequence
          Length = 153746

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 616   ttttgttccttcattcttttct 637
             ||||||||||||||||||||||
Sbjct: 70536 ttttgttccttcattcttttct 70515
to top
>gb|AC007240.2| Homo sapiens BAC clone RP11-83M8 from 2, complete sequence
          Length = 203250

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 131    caccaggagcaaacaaaccctg 152
              ||||||||||||||||||||||
Sbjct: 146023 caccaggagcaaacaaaccctg 146044
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>emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, complete sequence
          Length = 283185

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 274    ttcttatcttctaatagtacaccata 299
              |||||||| |||||||||||||||||
Sbjct: 170179 ttcttatcgtctaatagtacaccata 170204
to top
>emb|BX088551.7| Zebrafish DNA sequence from clone CH211-106A19 in linkage group 5,
             complete sequence
          Length = 184417

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 274   ttcttatcttctaatagtacaccata 299
             |||||||| |||||||||||||||||
Sbjct: 80000 ttcttatcgtctaatagtacaccata 79975
to top
>dbj|AP001894.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-606E8, complete
              sequence
          Length = 151452

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 614    gcttttgttccttcattcttttcttg 639
              ||||||||| ||||||||||||||||
Sbjct: 101130 gcttttgttgcttcattcttttcttg 101105
to top
>emb|AL773571.1|HS87D5 Homo sapiens chromosome 21 from cosmid LL21NC02-87D5 map
             21q22.2,D21S349-MX1, complete sequence
          Length = 43003

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 614   gcttttgttccttcattcttttcttg 639
             ||||||||| ||||||||||||||||
Sbjct: 10489 gcttttgttgcttcattcttttcttg 10514
to top
>gb|L35673.1|HUM8DC18Z Homo sapiens (subclone H8 9_b8 from P1 35 H5 C8) DNA sequence
          Length = 3435

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 614  gcttttgttccttcattcttttcttg 639
            ||||||||| ||||||||||||||||
Sbjct: 2778 gcttttgttgcttcattcttttcttg 2803
to top
>dbj|AP001610.1| Homo sapiens genomic DNA, chromosome 21, clone:CIT2533B8, MX1-D21S171
             region, complete sequence
          Length = 132110

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 614   gcttttgttccttcattcttttcttg 639
             ||||||||| ||||||||||||||||
Sbjct: 28157 gcttttgttgcttcattcttttcttg 28182
to top
>dbj|AP001609.1| Homo sapiens genomic DNA, chromosome 21, clone:KB447A5, MX1-D21S171
             region, complete sequence
          Length = 108927

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 614   gcttttgttccttcattcttttcttg 639
             ||||||||| ||||||||||||||||
Sbjct: 64162 gcttttgttgcttcattcttttcttg 64187
to top
>gb|AC115357.5| Mus musculus BAC clone RP23-81J4 from chromosome 14, complete sequence
          Length = 233685

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 237    caaaacaatggaaaaacaaac 257
              |||||||||||||||||||||
Sbjct: 138190 caaaacaatggaaaaacaaac 138170
to top
>gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence
          Length = 225423

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 645   ttctctttcctccctcagcat 665
             |||||||||||||||||||||
Sbjct: 97789 ttctctttcctccctcagcat 97769
to top
>gb|AC073585.8| Homo sapiens chromosome 10 clone RP11-564D11, complete sequence
          Length = 197295

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 614   gcttttgttccttcattcttttctt 638
             ||||||||| |||||||||||||||
Sbjct: 13703 gcttttgttgcttcattcttttctt 13727
to top
>dbj|AK122899.1| Homo sapiens cDNA FLJ16565 fis, clone SYNOV4007711, highly  similar
           to Homo sapiens zinc finger protein, subfamily 1A, 5
           (Pegasus) (PEGASUS)
          Length = 3458

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 614 gcttttgttccttcattcttttctt 638
           ||||||||| |||||||||||||||
Sbjct: 12  gcttttgttgcttcattcttttctt 36
to top
>gb|AC106854.5| Homo sapiens chromosome 18, clone CTD-2302G2, complete sequence
          Length = 116879

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 259   atcagcaaatatcctttctta 279
             |||||||||||||||||||||
Sbjct: 83651 atcagcaaatatcctttctta 83631
to top
>gb|AC010634.6| Homo sapiens chromosome 5 clone CTD-2318H23, complete sequence
          Length = 118994

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 413   tgtctctcttgctgtccttcc 433
             |||||||||||||||||||||
Sbjct: 40036 tgtctctcttgctgtccttcc 40016
to top
>gb|AC091043.12| Homo sapiens chromosome 18, clone RP11-595B24, complete sequence
          Length = 208310

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 259    atcagcaaatatcctttctta 279
              |||||||||||||||||||||
Sbjct: 180624 atcagcaaatatcctttctta 180644
to top
>gb|AC009949.9| Homo sapiens BAC clone RP11-69J7 from 2, complete sequence
          Length = 174699

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 615    cttttgttccttcattcttttcttg 639
              |||||||| ||||||||||||||||
Sbjct: 148386 cttttgttgcttcattcttttcttg 148362
to top
>gb|AC010642.5|AC010642 Homo sapiens chromosome 19 clone LLNLR-245B6, complete sequence
          Length = 45383

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 614   gcttttgttccttcattcttttctt 638
             ||||||||| |||||||||||||||
Sbjct: 22155 gcttttgttgcttcattcttttctt 22131
to top
>gb|L44606.1|MQSGAAR Aedes aegypti gamma-aminobutyric acid receptor gene, 5' UTR
          Length = 2048

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 620  gttccttcattcttttcttgnctt 643
            |||||||||||||||||||| |||
Sbjct: 1311 gttccttcattcttttcttgtctt 1334
to top
>emb|AL672239.8| Mouse DNA sequence from clone RP23-144D15 on chromosome 2, complete
             sequence
          Length = 204959

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 643   tcttctctttcctccctcagcataa 667
             ||||| |||||||||||||||||||
Sbjct: 82519 tcttccctttcctccctcagcataa 82543
to top
>ref|NM_106268.2| Arabidopsis thaliana unknown protein AT1G76185 mRNA, complete cds
          Length = 854

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 caaaacaatggaaaaacaaa 256
           ||||||||||||||||||||
Sbjct: 52  caaaacaatggaaaaacaaa 33
to top
>ref|NM_185683.1| Oryza sativa (japonica cultivar-group), Ozsa8034 predicted mRNA
          Length = 2778

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 664  ataacatactcatccaacat 683
            ||||||||||||||||||||
Sbjct: 1019 ataacatactcatccaacat 1000
to top
>gb|BC061836.1| Rattus norvegicus protein kinase N1, mRNA (cDNA clone MGC:72497
            IMAGE:5599989), complete cds
          Length = 3003

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  ctccgttccctggggacgac 396
            ||||||||||||||||||||
Sbjct: 2525 ctccgttccctggggacgac 2544
to top
>gb|AC114637.9| Mus musculus chromosome 3, clone RP24-119G15, complete sequence
          Length = 179087

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 641   cttcttctctttcctccctc 660
             ||||||||||||||||||||
Sbjct: 79509 cttcttctctttcctccctc 79528
to top
>gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete sequence
          Length = 385816

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   tacaccatattaggtcaaag 310
             ||||||||||||||||||||
Sbjct: 91139 tacaccatattaggtcaaag 91158
to top
>emb|CR388066.21| Zebrafish DNA sequence from clone CH211-67H20 in linkage group 6,
             complete sequence
          Length = 180961

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   cacagcacattatattagca 236
             ||||||||||||||||||||
Sbjct: 80958 cacagcacattatattagca 80939
to top
>ref|XM_805227.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506319.10) partial mRNA
          Length = 3879

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 624 cttcattcttttcttgncttcttctct 650
           ||||||||||||||||  |||||||||
Sbjct: 75  cttcattcttttcttgctttcttctct 101
to top
>gb|AC073590.5| Mus musculus chromosome 12 clone RP23-206K17, complete sequence
          Length = 204107

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    cttttgttccttcattcttt 634
              ||||||||||||||||||||
Sbjct: 120442 cttttgttccttcattcttt 120423
to top
>gb|AC023792.12| Homo sapiens 3 BAC CTC-503A18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 64414

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 230   attagcacaaaacaatggaaaaac 253
             |||||||||||||||||| |||||
Sbjct: 59044 attagcacaaaacaatgggaaaac 59067
to top
>gb|AC135253.2| Homo sapiens 3 BAC RP11-324L7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 154492

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 230   attagcacaaaacaatggaaaaac 253
             |||||||||||||||||| |||||
Sbjct: 77455 attagcacaaaacaatgggaaaac 77478
to top
>gb|AC104373.4| Homo sapiens chromosome 8, clone RP11-1144P22, complete sequence
          Length = 89086

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 616   ttttgttccttcattctttt 635
             ||||||||||||||||||||
Sbjct: 84658 ttttgttccttcattctttt 84639
to top
>gb|AC007031.2| Homo sapiens BAC clone RP11-17I10 from 7, complete sequence
          Length = 47042

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  cacaaaacaatggaaaaaca 254
            ||||||||||||||||||||
Sbjct: 8210 cacaaaacaatggaaaaaca 8229
to top
>emb|AL589826.12| Human DNA sequence from clone RP11-67P15 on chromosome 6 Contains a
              ribosomal protein L6 (RPL6) pseudogene and a CpG island,
              complete sequence
          Length = 118097

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    cttttgttccttcattcttt 634
              ||||||||||||||||||||
Sbjct: 109878 cttttgttccttcattcttt 109859
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 395     acaccgccttcgtcgcgctg 414
               ||||||||||||||||||||
Sbjct: 2001902 acaccgccttcgtcgcgctg 2001921
to top
>emb|AL357493.8| Human DNA sequence from clone RP11-439A17 on chromosome 1 Contains four
             novel genes, a novel gene (MGC57827), a ribosomal protein
             L22 (RPL22) pseudogene, a histone 2 H3c (HIST2H3C)
             pseudogene, the HIST2H2BB gene for histone 2 H2bb, the
             FCGR1B gene for Fc fragment of IgG high affinity Ib
             receptor for (CD64) and three CpG islands, complete
             sequence
          Length = 189539

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                            
Query: 630   tcttttcttgncttcttctctttcctccctc 660
             |||||||||  |||||| |||||||||||||
Sbjct: 41218 tcttttcttttcttcttttctttcctccctc 41188
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>emb|AL133476.17| Human DNA sequence from clone RP11-156G14 on chromosome 9p13.1-13.3
             Contains the 3' end of a novel gene, a protein associated
             with PRK1 (AWP1) pseudogene, a novel gene  (KIAA0375), a
             ribosomal protein L36a (L44L, RPL44) (RPL36A) pseudogene, 
             a novel gene, a ribosomal protein S29 (RPS29) pseudogene
             and a CpG island, complete sequence
          Length = 153826

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 615   cttttgttccttcattcttt 634
             ||||||||||||||||||||
Sbjct: 48425 cttttgttccttcattcttt 48406
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>gb|AC008534.7| Homo sapiens chromosome 5 clone CTC-484P3, complete sequence
          Length = 253402

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 615   cttttgttccttcattcttt 634
             ||||||||||||||||||||
Sbjct: 68372 cttttgttccttcattcttt 68391
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>emb|AL662982.3|OSJN00184 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083I11,
              complete sequence
          Length = 149085

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    cacaaaacaatggaaaaaca 254
              ||||||||||||||||||||
Sbjct: 122304 cacaaaacaatggaaaaaca 122285
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>emb|AL034583.1|SPAC637 S.pombe chromosome I cosmid c637
          Length = 35905

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  cattatattagcacaaaaca 243
            ||||||||||||||||||||
Sbjct: 2433 cattatattagcacaaaaca 2414
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>emb|CR318650.11| Zebrafish DNA sequence from clone CH211-174D12 in linkage group 19,
             complete sequence
          Length = 39122

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 212   acaaacacagcacattatattagc 235
             |||| |||||||||||||||||||
Sbjct: 31123 acaatcacagcacattatattagc 31100
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>gb|AC104012.11| Homo sapiens chromosome 8, clone RP11-281N10, complete sequence
          Length = 170668

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 616   ttttgttccttcattctttt 635
             ||||||||||||||||||||
Sbjct: 29168 ttttgttccttcattctttt 29149
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>gb|AC104796.4| Homo sapiens BAC clone RP11-318E19 from 4, complete sequence
          Length = 169106

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 614   gcttttgttccttcattctt 633
             ||||||||||||||||||||
Sbjct: 54122 gcttttgttccttcattctt 54141
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>gb|AC020980.6| Homo sapiens chromosome 5 clone RPCI-1_167G20, complete sequence
          Length = 175177

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 606    gacatagcgcttttgttcct 625
              ||||||||||||||||||||
Sbjct: 148146 gacatagcgcttttgttcct 148127
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>gb|AC096677.2| Homo sapiens chromosome 1 clone RP11-134G8, complete sequence
          Length = 223735

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 642    ttcttctctttcctccctca 661
              ||||||||||||||||||||
Sbjct: 107886 ttcttctctttcctccctca 107905
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>gb|AC008411.5| Homo sapiens chromosome 5 clone CTC-281B15, complete sequence
          Length = 108098

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 617   tttgttccttcattcttttc 636
             ||||||||||||||||||||
Sbjct: 54109 tttgttccttcattcttttc 54090
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>gb|AC022113.6| Homo sapiens chromosome 5 clone CTC-461F20, complete sequence
          Length = 188570

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 606    gacatagcgcttttgttcct 625
              ||||||||||||||||||||
Sbjct: 177080 gacatagcgcttttgttcct 177099
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>gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chromosome unknown, complete
              sequence
          Length = 182200

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 606    gacatagcgcttttgttcct 625
              ||||||||||||||||||||
Sbjct: 132404 gacatagcgcttttgttcct 132423
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>gb|L35634.1|RATPAK1A Rattus norvegicus cardiolipin/protease-activated protein kinase-1
            (PAK-1) mRNA, complete cds
          Length = 2936

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  ctccgttccctggggacgac 396
            ||||||||||||||||||||
Sbjct: 2467 ctccgttccctggggacgac 2486
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>gb|AC012312.9| Homo sapiens chromosome 5 clone CTC-558O19, complete sequence
          Length = 181226

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 615   cttttgttccttcattcttt 634
             ||||||||||||||||||||
Sbjct: 37750 cttttgttccttcattcttt 37731
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>gb|AF047663.3| Caenorhabditis elegans cosmid W09G12, complete sequence
          Length = 32179

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 238  aaaacaatggaaaaacaaac 257
            ||||||||||||||||||||
Sbjct: 2832 aaaacaatggaaaaacaaac 2851
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>gb|AC026436.4| Homo sapiens chromosome 5 clone CTD-2248H3, complete sequence
          Length = 100899

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 617  tttgttccttcattcttttc 636
            ||||||||||||||||||||
Sbjct: 3958 tttgttccttcattcttttc 3977
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>ref|NM_001020048.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC27D7.14c),
            partial mRNA
          Length = 3120

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  cattatattagcacaaaaca 243
            ||||||||||||||||||||
Sbjct: 2025 cattatattagcacaaaaca 2044
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 235     cacaaaacaatggaaaaaca 254
               ||||||||||||||||||||
Sbjct: 7475951 cacaaaacaatggaaaaaca 7475932
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>emb|BX817585.1|CNS0AB1P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL31ZC10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 854

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 caaaacaatggaaaaacaaa 256
           ||||||||||||||||||||
Sbjct: 52  caaaacaatggaaaaacaaa 33
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>gb|AC159103.1| Mus musculus BAC clone RP23-424O13 from chromosome 14, complete
             sequence
          Length = 195391

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   cacaaaacaatggaaaaaca 254
             ||||||||||||||||||||
Sbjct: 79570 cacaaaacaatggaaaaaca 79589
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>gb|AC092114.3| Homo sapiens chromosome 16 clone CTD-2009A10, complete sequence
          Length = 92466

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 581   catggtcagtgttcagtttc 600
             ||||||||||||||||||||
Sbjct: 27137 catggtcagtgttcagtttc 27118
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>gb|AC009104.10| Homo sapiens chromosome 16 clone RP11-44L9, complete sequence
          Length = 157470

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 581    catggtcagtgttcagtttc 600
              ||||||||||||||||||||
Sbjct: 126270 catggtcagtgttcagtttc 126251
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>gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana BAC T23E18 from chromosome I,
             complete sequence
          Length = 97554

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   caaaacaatggaaaaacaaa 256
             ||||||||||||||||||||
Sbjct: 46554 caaaacaatggaaaaacaaa 46535
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>ref|NM_017175.1| Rattus norvegicus protein kinase N1 (Pkn1), mRNA
          Length = 3035

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  ctccgttccctggggacgac 396
            ||||||||||||||||||||
Sbjct: 2575 ctccgttccctggggacgac 2594
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>gb|AY086332.1| Arabidopsis thaliana clone 24004 mRNA, complete sequence
          Length = 813

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 caaaacaatggaaaaacaaa 256
           ||||||||||||||||||||
Sbjct: 26  caaaacaatggaaaaacaaa 7
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>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0015E04
          Length = 152046

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 664   ataacatactcatccaacat 683
             ||||||||||||||||||||
Sbjct: 73165 ataacatactcatccaacat 73184
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>emb|BX248129.5| Zebrafish DNA sequence from clone CH211-196M16 in linkage group 17,
              complete sequence
          Length = 217707

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 251    aacaaaccatcagcaaatatcctt 274
              |||||| |||||||||||||||||
Sbjct: 199992 aacaaaacatcagcaaatatcctt 199969
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>gb|AC115848.10| Mus musculus chromosome 3, clone RP24-248L23, complete sequence
          Length = 143257

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                             
Query: 632    ttttcttgncttcttctctttcctccctcag 662
              |||||||  ||||||| ||||||||||||||
Sbjct: 122565 ttttcttttcttcttccctttcctccctcag 122595
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>gb|AF047464.1|AF047464 Schizosaccharomyces pombe Tpr1 (tpr1) mRNA, complete cds
          Length = 3348

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  cattatattagcacaaaaca 243
            ||||||||||||||||||||
Sbjct: 2067 cattatattagcacaaaaca 2086
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>emb|BX296546.6| Zebrafish DNA sequence from clone CH211-234P1 in linkage group 4,
              complete sequence
          Length = 174235

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 574    ggcccttcatggtcagtgtt 593
              ||||||||||||||||||||
Sbjct: 128766 ggcccttcatggtcagtgtt 128747
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>emb|CT025748.16| Zebrafish DNA sequence from clone CH73-166N24 in linkage group 5,
             complete sequence
          Length = 117231

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 652   tcctccctcagcataacata 671
             ||||||||||||||||||||
Sbjct: 21801 tcctccctcagcataacata 21820
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>emb|CT025691.7| Zebrafish DNA sequence from clone CH211-206I4 in linkage group 4,
             complete sequence
          Length = 68685

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   ggcccttcatggtcagtgtt 593
             ||||||||||||||||||||
Sbjct: 47929 ggcccttcatggtcagtgtt 47910
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>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region
               locus, strain C57BL/6
          Length = 2500000

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 615     cttttgttccttcattcttt 634
               ||||||||||||||||||||
Sbjct: 1716606 cttttgttccttcattcttt 1716625
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>gb|AE000512.1| Thermotoga maritima MSB8, complete genome
          Length = 1860725

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 481     ggaggagtgccgttcatgga 500
               ||||||||||||||||||||
Sbjct: 1346073 ggaggagtgccgttcatgga 1346092
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>emb|AL009227.1|SPAC27D7 S.pombe chromosome I cosmid c27D7
          Length = 35892

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   cattatattagcacaaaaca 243
             ||||||||||||||||||||
Sbjct: 32836 cattatattagcacaaaaca 32817
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>emb|AM041147.2| Mus musculus chromosome 12 BAC clone 407i12
          Length = 136395

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 615   cttttgttccttcattcttt 634
             ||||||||||||||||||||
Sbjct: 39703 cttttgttccttcattcttt 39684
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>emb|AJ972403.2| Mus musculus chromosome 12 BAC clone 4k8
          Length = 149371

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    cttttgttccttcattcttt 634
              ||||||||||||||||||||
Sbjct: 149231 cttttgttccttcattcttt 149212
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>emb|AJ972404.2| Mus musculus chromosome 12 BAC clone 4k8
          Length = 152217

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 615   cttttgttccttcattcttt 634
             ||||||||||||||||||||
Sbjct: 55525 cttttgttccttcattcttt 55506
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>emb|AL604045.7| Mouse DNA sequence from clone RP23-418O11 on chromosome 11, complete
              sequence
          Length = 221399

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 360    gtcttccttggcagcagctc 379
              ||||||||||||||||||||
Sbjct: 214117 gtcttccttggcagcagctc 214098
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>dbj|D26180.1|RATPKNA Rat mRNA for novel protein kinase PKN, complete cds
          Length = 3035

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  ctccgttccctggggacgac 396
            ||||||||||||||||||||
Sbjct: 2575 ctccgttccctggggacgac 2594


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,365,433
Number of Sequences: 3902068
Number of extensions: 6365433
Number of successful extensions: 132772
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132310
Number of HSP's gapped (non-prelim): 462
length of query: 719
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 696
effective length of database: 17,143,297,704
effective search space: 11931735201984
effective search space used: 11931735201984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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