ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) 79 9e-15
2CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein ki... 58 1e-08
3CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein ki... 41 0.002
4CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein ki... 40 0.004
5KR109_HUMAN (P60411) Keratin-associated protein 10-9 (Keratin-as... 35 0.12
6KR10C_HUMAN (P60413) Keratin-associated protein 10-12 (Keratin-a... 33 0.58
7KR106_HUMAN (P60371) Keratin-associated protein 10-6 (Keratin-as... 32 0.75
8PAR4_RAT (Q920E0) Proteinase-activated receptor 4 precursor (PAR... 30 2.9
9LRP8_HUMAN (Q14114) Low-density lipoprotein receptor-related pro... 30 3.7
10CCDC9_HUMAN (Q9Y3X0) Coiled-coil domain-containing protein 9 30 3.7
11TF3C4_HUMAN (Q9UKN8) General transcription factor 3C polypeptide... 29 8.3
12PMT7_YEAST (Q06644) Dolichyl-phosphate-mannose--protein mannosyl... 29 8.3

>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)|
          Length = 449

 Score = 78.6 bits (192), Expect = 9e-15
 Identities = 35/55 (63%), Positives = 45/55 (81%)
 Frame = -3

Query: 504 KTGRKGHLSVATEVFEVAPSLHMVELRKTGGDXLEFHSXYQNXSSELKDIVWKTE 340
           K GRKG+L+VATEVF+VAPSLH+VEL+K  GD LEF   Y+  S++LKD+VWK +
Sbjct: 385 KAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCD 439



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>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC|
           2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY
           SENSITIVE 2 protein)
          Length = 446

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 23/50 (46%), Positives = 37/50 (74%)
 Frame = -3

Query: 495 RKGHLSVATEVFEVAPSLHMVELRKTGGDXLEFHSXYQNXSSELKDIVWK 346
           + G L+V  E++EVAPSL MV++RK  G+ LE+H  Y+   S+L++I+W+
Sbjct: 381 KAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKKLCSKLENIIWR 430



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>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related
           kinase 3.16)
          Length = 444

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 21/43 (48%), Positives = 28/43 (65%)
 Frame = -3

Query: 483 LSVATEVFEVAPSLHMVELRKTGGDXLEFHSXYQNXSSELKDI 355
           LSV  EVFE+ PSL++VELRK+ GD   +   Y+     LKD+
Sbjct: 394 LSVTAEVFEIKPSLNVVELRKSYGDSCLYRQLYERL---LKDV 433



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>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC|
           2.7.11.1) (Serine/threonine-protein kinase ATPK10)
           (SOS2-like protein kinase PKS3) (SOS-interacting protein
           2) (SNF1-related kinase 3.1)
          Length = 421

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = -3

Query: 477 VATEVFEVAPSLHMVELRKTGGDXLEF 397
           V  EVFE+APS HMV L+K+GGD  E+
Sbjct: 375 VEAEVFEIAPSYHMVVLKKSGGDTAEY 401



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>KR109_HUMAN (P60411) Keratin-associated protein 10-9 (Keratin-associated|
           protein 10.9) (High sulfur keratin-associated protein
           10.9) (Keratin-associated protein 18-9)
           (Keratin-associated protein 18.9)
          Length = 292

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
 Frame = -2

Query: 277 CCTGGPPLQLIPLGAGYCIFLRHRIDGPVRRLLSKTAPFFFTERDCTLTCTTRPSQTSSL 98
           CC   P L L+            R+  P  ++  + +P    +  CT +CT    Q SS 
Sbjct: 36  CCAPAPCLTLVCTPVS-------RVSSPCCQVTCEPSP---CQSGCTSSCTPSCCQQSSC 85

Query: 97  *--YCNGVPNRHPECALVCTRVVCLSVFCIGS 8
              YC   P +   C  VC + VC    C G+
Sbjct: 86  QPAYCTSSPCQQACCVPVCCKPVCCVPVCCGA 117



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>KR10C_HUMAN (P60413) Keratin-associated protein 10-12 (Keratin-associated|
           protein 10.12) (High sulfur keratin-associated protein
           10.12) (Keratin-associated protein 18-12)
           (Keratin-associated protein 18.12)
          Length = 245

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 2/89 (2%)
 Frame = -2

Query: 277 CCTGGPPLQLIPLGAGYCIFLRHRIDGPVRRLLSKTAPFFFTERDCTLTCTTRPSQTSSL 98
           CC   P L L+            R+  P  R+  + +P    +  CT +CT    Q SS 
Sbjct: 41  CCAPAPCLSLVCTPVS-------RVSSPCCRVTCEPSP---CQSGCTSSCTPSCCQQSSC 90

Query: 97  *--YCNGVPNRHPECALVCTRVVCLSVFC 17
               C   P +   C  VC + VC    C
Sbjct: 91  QPACCTSSPCQQACCVPVCCKTVCCKPVC 119



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>KR106_HUMAN (P60371) Keratin-associated protein 10-6 (Keratin-associated|
           protein 10.6) (High sulfur keratin-associated protein
           10.6) (Keratin-associated protein 18-6)
           (Keratin-associated protein 18.6)
          Length = 365

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
 Frame = -2

Query: 277 CCTGGPPLQLIPLGAGYCIFLRHRIDGPVRRLLSKTAPFFFTERDCTLTCTTRPSQTSS- 101
           CC   P L L+            R+  P   +  + +P    +  CT +CT    Q SS 
Sbjct: 46  CCAPAPCLSLVCTPVS-------RVSSPCCPVTCEPSP---CQSGCTSSCTPSCCQQSSC 95

Query: 100 -L*YCNGVPNRHPECALVCTRVVCLSVFCIGSI 5
            L  C   P +   C  VC + VC    C  S+
Sbjct: 96  QLACCASSPCQQACCVPVCCKTVCCKPVCCVSV 128



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>PAR4_RAT (Q920E0) Proteinase-activated receptor 4 precursor (PAR-4)|
           (Thrombin receptor-like 3) (Coagulation factor II
           receptor-like 3)
          Length = 395

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = -3

Query: 240 WVLGTVY--FSGTASMVQSAVSCRRQRLFFLPSAIVHLHVQRGPPRQAPCNIATGCLTG 70
           WVL T       T  ++  AV+     L   P  + HL  QR P  +A C +AT  L G
Sbjct: 111 WVLATRVPRLPSTILLMNLAVADLLLALVLPPRLVYHLRGQRWPFGEAACRVATAALYG 169



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>LRP8_HUMAN (Q14114) Low-density lipoprotein receptor-related protein 8|
           precursor (Apolipoprotein E receptor 2)
          Length = 963

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
 Frame = +2

Query: 119 PRCTCKC--TIALGKKKRRCLR--QETADWTIDAVPEKYTVPST--------QRYQLKGW 262
           P+ TC C  T+ LG   +RC R  Q T+  T+ +   + TVP+T         R   +  
Sbjct: 715 PKYTCACPDTMWLGPDMKRCYRAPQSTSTTTLASTMTR-TVPATTRAPGTTVHRSTYQNH 773

Query: 263 STGTAPLDSSIP*SIN 310
           ST T  L +++P S++
Sbjct: 774 STETPSLTAAVPSSVS 789



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>CCDC9_HUMAN (Q9Y3X0) Coiled-coil domain-containing protein 9|
          Length = 531

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = +3

Query: 99  KELVWEGLVVHVSVQSRSVKKKGAVFDKRRRTGPSMRCRRNIQYPAPSGIN*RGGPPVQ 275
           K+   EG+ V    + RSV+K+    +  +  GPS   RR+   P P G +  G  P Q
Sbjct: 43  KKAELEGVAVTAPRKGRSVEKENVAVESEKNLGPS---RRSPGTPRPPGASKGGRTPPQ 98



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>TF3C4_HUMAN (Q9UKN8) General transcription factor 3C polypeptide 4 (EC|
           2.3.1.48) (Transcription factor IIIC-delta subunit)
           (TF3C-delta) (TFIIIC 90 kDa subunit) (TFIIIC 90)
          Length = 822

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -2

Query: 334 HNCEIVVMIDTSRNGTI*RCCTGGPPLQLIPLGAGYCIFLRHRI 203
           H+  IV M    +NGT+  C + G   Q+IP+     +   H++
Sbjct: 422 HSLPIVSMTADKQNGTVYTCSSDGKVRQVIPIFTDVALKFEHQL 465



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>PMT7_YEAST (Q06644) Dolichyl-phosphate-mannose--protein mannosyltransferase 7|
           (EC 2.4.1.109)
          Length = 662

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 253 QLIPLGAGYCIFLRHRIDGPVRRLLSKTAPFFFTERDCTLTCT 125
           QLIP+  G  I LRH+  G + R  +   P    + D  ++CT
Sbjct: 358 QLIPVEFGQSIKLRHKSTGKLLRASTAKPPISEQDYDFQISCT 400


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,439,932
Number of Sequences: 219361
Number of extensions: 1715218
Number of successful extensions: 4815
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4812
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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