| Clone Name | rbaal2m18 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase Length = 5593 Score = 825 bits (416), Expect = 0.0 Identities = 419/420 (99%) Strand = Plus / Minus Query: 3 aaacaaccccgcacatactgtacttgcttgggtcgtcacagtagctatttatcatctact 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5141 aaacaaccccgcacatactgtacttgcttgggtcgtcacagtagctatttatcatctact 5082 Query: 63 actacacatctatatgtatacacacacatacaatcttaattaattttagattatttatgt 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5081 actacacatctatatgtatacacacacatacaatcttaattaattttagattatttatgt 5022 Query: 123 actagctagtttagtcgatcggatgagccatggatgtgtcaggtacgcacggtgcttata 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5021 actagctagtttagtcgatcggatgagccatggatgtgtcaggtacgcacggtgcttata 4962 Query: 183 gcgtagcgtagccagccagccagtgacgtgcaccactgaccgaatcagctagctagacag 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4961 gcgtagcgtagccagccagccagtgacgtgcaccactgaccgaatcagctagctagacag 4902 Query: 243 ggtaagacgcgagctgggcgaggccgcagacgccctcgccgcggacaccgcggcggatcc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4901 ggtaagacgcgagctgggcgaggccgcagacgccctcgccgcggacaccgcggcggatcc 4842 Query: 303 tgacgtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttgg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4841 tgacgtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttgg 4782 Query: 363 tgccgtcgctcgccgtgccgtacccgaccgccgtgatggcgtggttgagctccgtgccgc 422 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4781 tgccgtcgctcgccgtgccgtacccggccgccgtgatggcgtggttgagctccgtgccgc 4722
>ref|XM_469786.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1460 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Minus Query: 260 gcgaggccgcagacgccctcgccgcggacaccgcggcggatcctgacgtagccgccctcg 319 |||| ||||||| ||||||||| || ||| |||||||||||||||||||||||||||||| Sbjct: 1076 gcgatgccgcaggcgccctcgcggccgacgccgcggcggatcctgacgtagccgccctcg 1017 Query: 320 ccccacgacccgccccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtg 379 ||||||||| ||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 1016 ccccacgacgcgccccacgagttcttcatcagccagtagcccgtgccgtcgctcgccgtg 957 Query: 380 ccgtacccgaccgccgtgatggcgtggttgagctccgtgccgc 422 ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 956 ccgtacccgaccgccgtcacggcgtggttcagctccgtgccgc 914
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 260 gcgaggccgcagacgccctcgccgcggacaccgcggcggatcctgacgtagccgccctcg 319 |||| ||||||| ||||||||| || ||| |||||||||||||||||||||||||||||| Sbjct: 71418 gcgatgccgcaggcgccctcgcggccgacgccgcggcggatcctgacgtagccgccctcg 71477 Query: 320 ccccacgacccgccccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtg 379 ||||||||| ||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 71478 ccccacgacgcgccccacgagttcttcatcagccagtagcccgtgccgtcgctcgccgtg 71537 Query: 380 ccgtacccgaccgccgtgatggcgtggttgagctccgtgccgc 422 ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 71538 ccgtacccgaccgccgtcacggcgtggttcagctccgtgccgc 71580
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Minus Query: 260 gcgaggccgcagacgccctcgccgcggacaccgcggcggatcctgacgtagccgccctcg 319 |||| ||||||| ||||||||| || ||| |||||||||||||||||||||||||||||| Sbjct: 30732365 gcgatgccgcaggcgccctcgcggccgacgccgcggcggatcctgacgtagccgccctcg 30732306 Query: 320 ccccacgacccgccccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtg 379 ||||||||| ||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 30732305 ccccacgacgcgccccacgagttcttcatcagccagtagcccgtgccgtcgctcgccgtg 30732246 Query: 380 ccgtacccgaccgccgtgatggcgtggttgagctccgtgccgc 422 ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 30732245 ccgtacccgaccgccgtcacggcgtggttcagctccgtgccgc 30732203 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cgccgcggacaccgcggcgg 298 |||||||||||||||||||| Sbjct: 27945070 cgccgcggacaccgcggcgg 27945089 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cgccgcggacaccgcggcgg 298 |||||||||||||||||||| Sbjct: 3971506 cgccgcggacaccgcggcgg 3971525 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 tcgccgtgccgtacccgacc 391 |||||||||||||||||||| Sbjct: 2453794 tcgccgtgccgtacccgacc 2453813
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 260 gcgaggccgcagacgccctcgccgcggacaccgcggcggatcctgacgtagccgccctcg 319 |||| ||||||| ||||||||| || ||| |||||||||||||||||||||||||||||| Sbjct: 30025 gcgatgccgcaggcgccctcgcggccgacgccgcggcggatcctgacgtagccgccctcg 30084 Query: 320 ccccacgacccgccccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtg 379 ||||||||| ||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 30085 ccccacgacgcgccccacgagttcttcatcagccagtagcccgtgccgtcgctcgccgtg 30144 Query: 380 ccgtacccgaccgccgtgatggcgtggttgagctccgtgccgc 422 ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 30145 ccgtacccgaccgccgtcacggcgtggttcagctccgtgccgc 30187
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Minus Query: 260 gcgaggccgcagacgccctcgccgcggacaccgcggcggatcctgacgtagccgccctcg 319 |||| ||||||| ||||||||| || ||| |||||||||||||||||||||||||||||| Sbjct: 41066 gcgatgccgcaggcgccctcgcggccgacgccgcggcggatcctgacgtagccgccctcg 41007 Query: 320 ccccacgacccgccccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtg 379 ||||||||| ||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 41006 ccccacgacgcgccccacgagttcttcatcagccagtagcccgtgccgtcgctcgccgtg 40947 Query: 380 ccgtacccgaccgccgtgatggcgtggttgagctccgtgccgc 422 ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 40946 ccgtacccgaccgccgtcacggcgtggttcagctccgtgccgc 40904
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Minus Query: 260 gcgaggccgcagacgccctcgccgcggacaccgcggcggatcctgacgtagccgccctcg 319 |||| ||||||| ||||||||| || ||| |||||||||||||||||||||||||||||| Sbjct: 30823789 gcgatgccgcaggcgccctcgcggccgacgccgcggcggatcctgacgtagccgccctcg 30823730 Query: 320 ccccacgacccgccccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtg 379 ||||||||| ||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 30823729 ccccacgacgcgccccacgagttcttcatcagccagtagcccgtgccgtcgctcgccgtg 30823670 Query: 380 ccgtacccgaccgccgtgatggcgtggttgagctccgtgccgc 422 ||||||||||||||||| | ||||||||| ||||||||||||| Sbjct: 30823669 ccgtacccgaccgccgtcacggcgtggttcagctccgtgccgc 30823627 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cgccgcggacaccgcggcgg 298 |||||||||||||||||||| Sbjct: 28036394 cgccgcggacaccgcggcgg 28036413 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cgccgcggacaccgcggcgg 298 |||||||||||||||||||| Sbjct: 3971617 cgccgcggacaccgcggcgg 3971636 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 tcgccgtgccgtacccgacc 391 |||||||||||||||||||| Sbjct: 2453904 tcgccgtgccgtacccgacc 2453923
>ref|XM_474851.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 945 Score = 137 bits (69), Expect = 3e-29 Identities = 99/109 (90%) Strand = Plus / Minus Query: 299 atcctgacgtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtac 358 ||||||||||||||| |||| ||||||||| |||||||||||||||||| | ||||||| Sbjct: 875 atcctgacgtagccgtcctccccccacgacgtgccccacgagttcttcatcagccagtac 816 Query: 359 ttggtgccgtcgctcgccgtgccgtacccgaccgccgtgatggcgtggt 407 ||||| |||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 815 ttggtcccgtcgctcgccacgccgtacccgaccgccgtgatcgcgtggt 767
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 137 bits (69), Expect = 3e-29 Identities = 99/109 (90%) Strand = Plus / Minus Query: 299 atcctgacgtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtac 358 ||||||||||||||| |||| ||||||||| |||||||||||||||||| | ||||||| Sbjct: 7213474 atcctgacgtagccgtcctccccccacgacgtgccccacgagttcttcatcagccagtac 7213415 Query: 359 ttggtgccgtcgctcgccgtgccgtacccgaccgccgtgatggcgtggt 407 ||||| |||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 7213414 ttggtcccgtcgctcgccacgccgtacccgaccgccgtgatcgcgtggt 7213366 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtac 358 |||||||||||||||| |||||||||||| Sbjct: 14184190 cgccccacgagttcttgatgatccagtac 14184162 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 103 taattttagattatttatgtacta 126 |||||||| ||||||||||||||| Sbjct: 24538927 taattttaaattatttatgtacta 24538904
>emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035O13, complete sequence Length = 143298 Score = 137 bits (69), Expect = 3e-29 Identities = 99/109 (90%) Strand = Plus / Minus Query: 299 atcctgacgtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtac 358 ||||||||||||||| |||| ||||||||| |||||||||||||||||| | ||||||| Sbjct: 77211 atcctgacgtagccgtcctccccccacgacgtgccccacgagttcttcatcagccagtac 77152 Query: 359 ttggtgccgtcgctcgccgtgccgtacccgaccgccgtgatggcgtggt 407 ||||| |||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 77151 ttggtcccgtcgctcgccacgccgtacccgaccgccgtgatcgcgtggt 77103
>gb|AY781344.1| Oryza sativa (japonica cultivar-group) putative cysteine protease mRNA, complete cds Length = 1279 Score = 137 bits (69), Expect = 3e-29 Identities = 99/109 (90%) Strand = Plus / Minus Query: 299 atcctgacgtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtac 358 ||||||||||||||| |||| ||||||||| |||||||||||||||||| | ||||||| Sbjct: 1094 atcctgacgtagccgtcctccccccacgacgtgccccacgagttcttcatcagccagtac 1035 Query: 359 ttggtgccgtcgctcgccgtgccgtacccgaccgccgtgatggcgtggt 407 ||||| |||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 1034 ttggtcccgtcgctcgccacgccgtacccgaccgccgtgatcgcgtggt 986
>gb|AY109416.1| Zea mays CL694_1 mRNA sequence Length = 3272 Score = 97.6 bits (49), Expect = 3e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 340 gttcttcatgatccagtacttggtgccgtcgctcgccgtgccgtacccgaccgccgtgat 399 ||||||||| | ||||||| | ||||||||| ||||||||||||||||||| |||||||| Sbjct: 2708 gttcttcatcagccagtaccttgtgccgtcgttcgccgtgccgtacccgacggccgtgat 2767 Query: 400 ggcgtggttgagctccg 416 |||||||||||| |||| Sbjct: 2768 ggcgtggttgaggtccg 2784
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 81.8 bits (41), Expect = 2e-12 Identities = 73/81 (90%), Gaps = 2/81 (2%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagtacttggtgccgtcgctcg-ccgtgccgtacccgac 390 ||||||||||||||||| | ||||||||||||||||| ||||| | ||||||||||| || Sbjct: 22432974 ccccacgagttcttcattagccagtacttggtgccgt-gctcgtcggtgccgtaccccac 22432916 Query: 391 cgccgtgatggcgtggttgag 411 |||||| ||||| |||||||| Sbjct: 22432915 cgccgtcatggcatggttgag 22432895 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 acacatctatatgtatacacacaca 90 |||||| |||||||||||||||||| Sbjct: 4993592 acacatatatatgtatacacacaca 4993616 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 attttagattatttatgtac 124 |||||||||||||||||||| Sbjct: 22962885 attttagattatttatgtac 22962866
>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0498C03 Length = 146394 Score = 81.8 bits (41), Expect = 2e-12 Identities = 73/81 (90%), Gaps = 2/81 (2%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagtacttggtgccgtcgctcg-ccgtgccgtacccgac 390 ||||||||||||||||| | ||||||||||||||||| ||||| | ||||||||||| || Sbjct: 70107 ccccacgagttcttcattagccagtacttggtgccgt-gctcgtcggtgccgtaccccac 70049 Query: 391 cgccgtgatggcgtggttgag 411 |||||| ||||| |||||||| Sbjct: 70048 cgccgtcatggcatggttgag 70028
>dbj|AK067453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106H06, full insert sequence Length = 1365 Score = 81.8 bits (41), Expect = 2e-12 Identities = 73/81 (90%), Gaps = 2/81 (2%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagtacttggtgccgtcgctcg-ccgtgccgtacccgac 390 ||||||||||||||||| | ||||||||||||||||| ||||| | ||||||||||| || Sbjct: 1127 ccccacgagttcttcattagccagtacttggtgccgt-gctcgtcggtgccgtaccccac 1069 Query: 391 cgccgtgatggcgtggttgag 411 |||||| ||||| |||||||| Sbjct: 1068 cgccgtcatggcatggttgag 1048
>gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026D03 map near S2137, complete sequence Length = 115141 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtacttggtgccgtc 369 |||||||||||||||| | ||||||||||||||||||||| Sbjct: 34063 cgccccacgagttcttgacgatccagtacttggtgccgtc 34024
>emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease Length = 1440 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtacttggtgccgtc 369 |||||||||||||||| | ||||||||||||||||||||| Sbjct: 1075 cgccccacgagttcttgacgatccagtacttggtgccgtc 1036
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 330 cgccccacgagttcttcatgatccagtacttggtgccgtc 369 |||||||||||||||| | ||||||||||||||||||||| Sbjct: 8298337 cgccccacgagttcttgacgatccagtacttggtgccgtc 8298376 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttgg 362 |||||||| ||||||||| ||| |||||| |||||| | ||| |||||||||||| Sbjct: 12867537 gtagccgcgctcgccccatgactggccccatgagttcatgatggtccagtacttgg 12867482
>dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K03, full insert sequence Length = 1511 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtacttggtgccgtc 369 |||||||||||||||| | ||||||||||||||||||||| Sbjct: 1081 cgccccacgagttcttgacgatccagtacttggtgccgtc 1042
>dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene for cysteine endopeptidase, complete cds Length = 3836 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtacttggtgccgtc 369 |||||||||||||||| | ||||||||||||||||||||| Sbjct: 2597 cgccccacgagttcttgacgatccagtacttggtgccgtc 2558
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 330 cgccccacgagttcttcatgatccagtacttggtgccgtc 369 |||||||||||||||| | ||||||||||||||||||||| Sbjct: 8369100 cgccccacgagttcttgacgatccagtacttggtgccgtc 8369139 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttgg 362 |||||||| ||||||||| ||| |||||| |||||| | ||| |||||||||||| Sbjct: 12947744 gtagccgcgctcgccccatgactggccccatgagttcatgatggtccagtacttgg 12947689
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 315 cctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgccgtcgctcg 374 |||||||||||| | ||||||||||||||||| | ||| ||||||||||| ||||||| Sbjct: 10054133 cctcgccccacgtcgtgccccacgagttcttcaccagccaatacttggtgccatcgctcg 10054074 Query: 375 ccg 377 ||| Sbjct: 10054073 ccg 10054071 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 279 cgccgcggacaccgcggcggat 300 |||||||||||||||||||||| Sbjct: 22568502 cgccgcggacaccgcggcggat 22568523 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 tcgccgtgccgtacccgacc 391 |||||||||||||||||||| Sbjct: 23637334 tcgccgtgccgtacccgacc 23637353
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 315 cctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgccgtcgctcg 374 |||||||||||| | ||||||||||||||||| | ||| ||||||||||| ||||||| Sbjct: 10054018 cctcgccccacgtcgtgccccacgagttcttcaccagccaatacttggtgccatcgctcg 10053959 Query: 375 ccg 377 ||| Sbjct: 10053958 ccg 10053956 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 279 cgccgcggacaccgcggcggat 300 |||||||||||||||||||||| Sbjct: 22496847 cgccgcggacaccgcggcggat 22496868 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 tcgccgtgccgtacccgacc 391 |||||||||||||||||||| Sbjct: 23565521 tcgccgtgccgtacccgacc 23565540
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 315 cctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgccgtcgctcg 374 |||||||||||| | ||||||||||||||||| | ||| ||||||||||| ||||||| Sbjct: 108488 cctcgccccacgtcgtgccccacgagttcttcaccagccaatacttggtgccatcgctcg 108547 Query: 375 ccg 377 ||| Sbjct: 108548 ccg 108550
>emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC OSJNBb0071E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132906 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 315 cctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgccgtcgctcg 374 |||||||||||| | ||||||||||||||||| | ||| ||||||||||| ||||||| Sbjct: 3941 cctcgccccacgtcgtgccccacgagttcttcaccagccaatacttggtgccatcgctcg 4000 Query: 375 ccg 377 ||| Sbjct: 4001 ccg 4003
>ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.17 mRNA Length = 1437 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtgccgtacccga 389 |||||||||||||| | | ||||||||||||||||||||| || ||||||||| || | Sbjct: 1042 cgccccacgagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagccca 983 Query: 390 ccgccg 395 |||||| Sbjct: 982 ccgccg 977
>ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtgccgtacccga 389 |||||||||||||| | | ||||||||||||||||||||| || ||||||||| || | Sbjct: 1042 cgccccacgagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagccca 983 Query: 390 ccgccg 395 |||||| Sbjct: 982 ccgccg 977
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtgccgtacccga 389 |||||||||||||| | | ||||||||||||||||||||| || ||||||||| || | Sbjct: 27868940 cgccccacgagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagccca 27868881 Query: 390 ccgccg 395 |||||| Sbjct: 27868880 ccgccg 27868875 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 tatttatcatctactactac 67 |||||||||||||||||||| Sbjct: 15599899 tatttatcatctactactac 15599880
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtgccgtacccga 389 |||||||||||||| | | ||||||||||||||||||||| || ||||||||| || | Sbjct: 77018 cgccccacgagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagccca 76959 Query: 390 ccgccg 395 |||||| Sbjct: 76958 ccgccg 76953
>dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B06, full insert sequence Length = 1351 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtgccgtacccga 389 |||||||||||||| | | ||||||||||||||||||||| || ||||||||| || | Sbjct: 956 cgccccacgagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagccca 897 Query: 390 ccgccg 395 |||||| Sbjct: 896 ccgccg 891
>dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144C09, full insert sequence Length = 1437 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtgccgtacccga 389 |||||||||||||| | | ||||||||||||||||||||| || ||||||||| || | Sbjct: 1042 cgccccacgagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagccca 983 Query: 390 ccgccg 395 |||||| Sbjct: 982 ccgccg 977
>dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J24, full insert sequence Length = 1437 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtgccgtacccga 389 |||||||||||||| | | ||||||||||||||||||||| || ||||||||| || | Sbjct: 1042 cgccccacgagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagccca 983 Query: 390 ccgccg 395 |||||| Sbjct: 982 ccgccg 977
>ref|XM_450799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1419 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||| ||||||||| ||| |||||| |||||||| ||| |||||||||||| ||| Sbjct: 1065 gtagccgcgctcgccccatgactggccccatgagttcttgatggtccagtacttggcgcc 1006 Query: 367 g 367 | Sbjct: 1005 g 1005
>ref|XM_506663.1| PREDICTED Oryza sativa (japonica cultivar-group), P0027G10.55 mRNA Length = 1882 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||| ||||||||| ||| |||||| |||||||| ||| |||||||||||| ||| Sbjct: 1073 gtagccgcgctcgccccatgactggccccatgagttcttgatggtccagtacttggcgcc 1014 Query: 367 g 367 | Sbjct: 1013 g 1013
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||| ||||||||| ||| |||||| |||||||| ||| |||||||||||| ||| Sbjct: 12844630 gtagccgcgctcgccccatgactggccccatgagttcttgatggtccagtacttggcgcc 12844689 Query: 367 g 367 | Sbjct: 12844690 g 12844690 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 332 ccccacgagttcttcatgatccagtacttg 361 |||||||||||||| ||||||||||||||| Sbjct: 22050555 ccccacgagttcttgatgatccagtacttg 22050584 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtactt 360 ||||||| | ||||||||| | | |||||||||||||||| |||||||||||| Sbjct: 18948250 gtagccggcgtcgccccactccgccccccacgagttcttcacgatccagtactt 18948303 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 332 ccccacgagttcttcatgatccagtacttggtg 364 |||||||||||||| | |||||||||||||||| Sbjct: 22126325 ccccacgagttcttaacgatccagtacttggtg 22126357 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 tctatatgtatacacacacataca 94 ||||||| |||||||||||||||| Sbjct: 7046603 tctatatatatacacacacataca 7046580
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||| ||||||||| ||| |||||| |||||||| ||| |||||||||||| ||| Sbjct: 152407 gtagccgcgctcgccccatgactggccccatgagttcttgatggtccagtacttggcgcc 152466 Query: 367 g 367 | Sbjct: 152467 g 152467
>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0505H05 Length = 152845 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||| ||||||||| ||| |||||| |||||||| ||| |||||||||||| ||| Sbjct: 6614 gtagccgcgctcgccccatgactggccccatgagttcttgatggtccagtacttggcgcc 6673 Query: 367 g 367 | Sbjct: 6674 g 6674
>dbj|AK071091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079N05, full insert sequence Length = 1419 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||| ||||||||| ||| |||||| |||||||| ||| |||||||||||| ||| Sbjct: 1065 gtagccgcgctcgccccatgactggccccatgagttcttgatggtccagtacttggcgcc 1006 Query: 367 g 367 | Sbjct: 1005 g 1005
>dbj|AK070060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041D01, full insert sequence Length = 1882 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||| ||||||||| ||| |||||| |||||||| ||| |||||||||||| ||| Sbjct: 1073 gtagccgcgctcgccccatgactggccccatgagttcttgatggtccagtacttggcgcc 1014 Query: 367 g 367 | Sbjct: 1013 g 1013
>ref|XM_463580.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1116 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||||||||||||| | ||||||||||||||| | ||||||||||| ||||| Sbjct: 984 gtagccgccctcgccccaggctgtgccccacgagttcttgacgatccagtactccgtgcc 925 Query: 367 gtcg 370 |||| Sbjct: 924 gtcg 921
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0497A05 Length = 130919 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||||||||||||| | ||||||||||||||| | ||||||||||| ||||| Sbjct: 50163 gtagccgccctcgccccaggctgtgccccacgagttcttgacgatccagtactccgtgcc 50104 Query: 367 gtcg 370 |||| Sbjct: 50103 gtcg 50100
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||||||||||||| | ||||||||||||||| | ||||||||||| ||||| Sbjct: 39495721 gtagccgccctcgccccaggctgtgccccacgagttcttgacgatccagtactccgtgcc 39495662 Query: 367 gtcg 370 |||| Sbjct: 39495661 gtcg 39495658 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 333 cccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtgccgtacccgacc 391 ||||||||||||| | | ||||||| ||||||||||||||||| |||||||||||| Sbjct: 24347731 cccacgagttcttgagcagccagtacggcgtgccgtcgctcgccgtcccgtacccgacc 24347789 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 acatacaatcttaattaattttag 111 ||||||||||||||||| |||||| Sbjct: 39914636 acatacaatcttaattatttttag 39914659 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 373 cgccgtgccgtacccgaccgccgtgatggcgtggttgagc 412 ||||| |||||| || ||| |||||| ||||||||||||| Sbjct: 24340067 cgccgcgccgtagcccaccaccgtgacggcgtggttgagc 24340106
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||||||||||||| | ||||||||||||||| | ||||||||||| ||||| Sbjct: 70735 gtagccgccctcgccccaggctgtgccccacgagttcttgacgatccagtactccgtgcc 70676 Query: 367 gtcg 370 |||| Sbjct: 70675 gtcg 70672
>gb|AF099203.1|AF099203 Oryza sativa cysteine endopeptidase precursor (EP3A) gene, complete cds Length = 2588 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||||||||||||| | ||||||||||||||| | ||||||||||| ||||| Sbjct: 1948 gtagccgccctcgccccaggctgtgccccacgagttcttgacgatccagtactccgtgcc 1889 Query: 367 gtcg 370 |||| Sbjct: 1888 gtcg 1885
>dbj|D76415.1| Rice seedling mRNA for cysteine proteinase, complete cds Length = 1429 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||||||||||||| | ||||||||||||||| | ||||||||||| ||||| Sbjct: 994 gtagccgccctcgccccaggctgtgccccacgagttcttgacgatccagtactccgtgcc 935 Query: 367 gtcg 370 |||| Sbjct: 934 gtcg 931
>dbj|AB004819.1| Oryza sativa Rep1 gene for cysteine endopeptidase, complete cds Length = 2544 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgcc 366 |||||||||||||||||| | ||||||||||||||| | ||||||||||| ||||| Sbjct: 1910 gtagccgccctcgccccaggctgtgccccacgagttcttgacgatccagtactccgtgcc 1851 Query: 367 gtcg 370 |||| Sbjct: 1850 gtcg 1847
>ref|NM_192773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1080 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 333 cccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtgccgtacccgacc 391 ||||||||||||| | | ||||||| ||||||||||||||||| |||||||||||| Sbjct: 991 cccacgagttcttgagcagccagtacggcgtgccgtcgctcgccgtcccgtacccgacc 933
>emb|Z97023.1|HVZ97023 Hordeum vulgare mRNA encoding cysteine endopeptidase EP-A Length = 1299 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagtacttggtgcc 366 |||||||||||||||| ||||||||| |||||||| Sbjct: 986 ccccacgagttcttcacgatccagtatttggtgcc 952
>emb|Z97021.1|HVZ97021 Hordeum vulgare gene encoding cysteine endopeptidase EP-A Length = 2752 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagtacttggtgcc 366 |||||||||||||||| ||||||||| |||||||| Sbjct: 2363 ccccacgagttcttcacgatccagtatttggtgcc 2329
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 333 cccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtgccgtacccgacc 391 ||||||||||||| | | ||||||| ||||||||||||||||| |||||||||||| Sbjct: 93635 cccacgagttcttgagcagccagtacggcgtgccgtcgctcgccgtcccgtacccgacc 93693 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 373 cgccgtgccgtacccgaccgccgtgatggcgtggttgagc 412 ||||| |||||| || ||| |||||| ||||||||||||| Sbjct: 85971 cgccgcgccgtagcccaccaccgtgacggcgtggttgagc 86010
>dbj|AK110832.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A05, full insert sequence Length = 1383 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 333 cccacgagttcttcatgatccagtacttggtgccgtcgctcgccgtgccgtacccgacc 391 ||||||||||||| | | ||||||| ||||||||||||||||| |||||||||||| Sbjct: 1071 cccacgagttcttgagcagccagtacggcgtgccgtcgctcgccgtcccgtacccgacc 1013
>gb|U94591.1|HVU94591 Hordeum vulgare cysteine proteinase precursor, mRNA, complete cds Length = 1328 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagtacttggtgcc 366 |||||||||||||||| ||||||||| |||||||| Sbjct: 994 ccccacgagttcttcacgatccagtatttggtgcc 960
>gb|AY426971.1| Bombyx mori fibroinase precursor, mRNA, complete cds Length = 1026 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 316 ctcgccccacgacccgccccacgagttcttcatgatccagta 357 |||||||||||| | ||||||||||||||||| || |||||| Sbjct: 948 ctcgccccacgagcggccccacgagttcttcacgagccagta 907
>emb|AL161612.13| Human DNA sequence from clone RP11-196P2 on chromosome 13 Contains a novel gene, complete sequence Length = 160145 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| |||||||||||||||||||||| Sbjct: 135604 tacacatatatatgtatacacacacataca 135575 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| |||||||||||||||||||||| Sbjct: 135578 tacacatatatatgtatacacacacataca 135549 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| |||||||||||||||||||||| Sbjct: 135552 tacacatatatatgtatacacacacataca 135523 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| |||||||||||||||||||||| Sbjct: 135526 tacacatatatatgtatacacacacataca 135497 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| |||||||||||||||||||||| Sbjct: 135500 tacacatatatatgtatacacacacataca 135471 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 136110 tatatgtatacacacacataca 136089 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacac 89 ||||||| ||||||||||||||||| Sbjct: 135724 tacacatatatatgtatacacacac 135700 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacac 89 ||||||| ||||||||||||||||| Sbjct: 135694 tacacatatatatgtatacacacac 135670 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacac 89 ||||||| ||||||||||||||||| Sbjct: 135664 tacacatatatatgtatacacacac 135640 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacac 89 ||||||| ||||||||||||||||| Sbjct: 135634 tacacatatatatgtatacacacac 135610 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacata 92 |||||||||||||||||||| Sbjct: 136078 tatatgtatacacacacata 136059 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacata 92 |||||||||||||||||||| Sbjct: 136060 tatatgtatacacacacata 136041 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacac 89 |||||| ||||||||||||||||| Sbjct: 135783 acacatatatatgtatacacacac 135760 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacac 89 |||||| ||||||||||||||||| Sbjct: 135753 acacatatatatgtatacacacac 135730 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacaca 88 ||||||| |||||||||||||||| Sbjct: 135474 tacacatatatatgtatacacaca 135451
>gb|S77508.1| cysteine proteinase [Bombyx mori=silkmoths, pupae, eggs, mRNA, 1465 nt] Length = 1465 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 316 ctcgccccacgacccgccccacgagttcttcatgatccagta 357 |||||||||||| | ||||||||||||||||| || |||||| Sbjct: 987 ctcgccccacgagcggccccacgagttcttcacgagccagta 946
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 332 ccccacgagttcttcatgatccagtacttg 361 |||||||||||||| ||||||||||||||| Sbjct: 92619 ccccacgagttcttgatgatccagtacttg 92648
>dbj|AK108733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D05, full insert sequence Length = 904 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagtacttg 361 |||||||||||||| ||||||||||||||| Sbjct: 602 ccccacgagttcttgatgatccagtacttg 573
>dbj|AK072767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138P12, full insert sequence Length = 1322 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtactt 360 ||||||| | ||||||||| | | |||||||||||||||| |||||||||||| Sbjct: 1034 gtagccggcgtcgccccactccgccccccacgagttcttcacgatccagtactt 981
>ref|XM_471773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtac 358 |||||||||||||||| |||||||||||| Sbjct: 1024 cgccccacgagttcttgatgatccagtac 996
>gb|AC133203.3| Mus musculus BAC clone RP23-85M7 from chromosome 15, complete sequence Length = 227133 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 70 atctatatgtatacacacacataca 94 ||||||||||||||||||||||||| Sbjct: 188264 atctatatgtatacacacacataca 188240 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacata 92 |||||||||||||||||||| Sbjct: 27643 tatatgtatacacacacata 27624
>gb|AC122261.2| Mus musculus BAC clone RP23-187F24 from 15, complete sequence Length = 223801 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 70 atctatatgtatacacacacataca 94 ||||||||||||||||||||||||| Sbjct: 30868 atctatatgtatacacacacataca 30844
>gb|AC102805.6| Mus musculus chromosome 13, clone RP23-74G2, complete sequence Length = 136553 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 66 acacatctatatgtatacacacacataca 94 |||||| |||||||||||||||||||||| Sbjct: 27239 acacatatatatgtatacacacacataca 27267
>gb|AC164089.4| Mus musculus BAC clone RP23-70G12 from chromosome 3, complete sequence Length = 223387 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacataca 94 ||||||||||||||| ||||||||||||| Sbjct: 64142 acacatctatatgtaaacacacacataca 64114
>gb|AC099526.5| Papio anubis clone RP41-308A9, complete sequence Length = 143983 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 68 acatctatatgtatacacacacata 92 ||||||||||||||||||||||||| Sbjct: 127261 acatctatatgtatacacacacata 127237
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtac 358 |||||||||||||||| |||||||||||| Sbjct: 21956 cgccccacgagttcttgatgatccagtac 21928
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 332 ccccacgagttcttcatgatccagtacttggtg 364 |||||||||||||| | |||||||||||||||| Sbjct: 47818 ccccacgagttcttaacgatccagtacttggtg 47850
>dbj|AK121305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H18, full insert sequence Length = 1981 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtac 358 |||||||||||||||| |||||||||||| Sbjct: 1592 cgccccacgagttcttgatgatccagtac 1564
>dbj|AK099197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120K15, full insert sequence Length = 1290 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagtactt 360 |||||||||||||||| |||||||||||| Sbjct: 1000 ccccacgagttcttcacgatccagtactt 972
>gb|L38514.1|TRBRANGB Trypanosoma rangeli (clone 3) rangelipain gene, 3' end of cds and 5' end of cds Length = 1898 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtac 358 |||||||||||||||| |||||||||||| Sbjct: 139 cgccccacgagttcttgatgatccagtac 111
>gb|L38513.1|TRBRANGA Trypanosoma rangeli (clone 2) rangelipain gene, 3' end of cds and 5' end of cds Length = 1905 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtac 358 |||||||||||||||| |||||||||||| Sbjct: 139 cgccccacgagttcttgatgatccagtac 111
>gb|L38512.1|TRBRANG Trypanosoma rangeli (clone 1) rangelipain gene, 3' end of cds and 5' end of cds Length = 1902 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagtac 358 |||||||||||||||| |||||||||||| Sbjct: 139 cgccccacgagttcttgatgatccagtac 111
>gb|BT017759.1| Zea mays clone EL01N0501D06.c mRNA sequence Length = 1131 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagta 357 |||||||||||||||| ||||||||||| Sbjct: 714 cgccccacgagttcttgatgatccagta 687
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagtacttgg 362 |||||||| ||||||||| ||| |||||| |||||| | ||| |||||||||||| Sbjct: 34873 gtagccgcgctcgccccatgactggccccatgagttcatgatggtccagtacttgg 34818
>gb|AC117184.3| Mus musculus BAC clone RP23-37L10 from chromosome 7, complete sequence Length = 187341 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 75 tatgtatacacacacatacaatcttaat 102 |||||||||||||||| ||||||||||| Sbjct: 8971 tatgtatacacacacacacaatcttaat 8998
>gb|AC157597.4| Mus musculus BAC clone RP23-231O9 from chromosome 16, complete sequence Length = 171299 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 68 acatctatatgtatacacacacat 91 |||||||||||||||||||||||| Sbjct: 81441 acatctatatgtatacacacacat 81464
>gb|AC117058.19| Rattus norvegicus 16 BAC CH230-318I9 (Children's Hospital Oakland Research Institute) complete sequence Length = 181157 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 66 acacatctatatgtatacacacacatacaatc 97 |||||| ||||| ||||||||||||||||||| Sbjct: 153382 acacatatatatatatacacacacatacaatc 153413
>emb|X82185.1|ZMCYSPRO Z.mays mRNA for cysteine proteinase Length = 693 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagta 357 |||||||||||||||| ||||||||||| Sbjct: 322 cgccccacgagttcttgatgatccagta 295
>gb|AC121956.3| Mus musculus BAC clone RP24-225I19 from chromosome 7, complete sequence Length = 191330 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 75 tatgtatacacacacatacaatcttaat 102 |||||||||||||||| ||||||||||| Sbjct: 13340 tatgtatacacacacacacaatcttaat 13313
>emb|X62163.1|LMLCPA L.mexicana LCPa mRNA for cysteine proteinase Length = 2355 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagtac 358 ||||||||||||||||| |||||||||| Sbjct: 2163 gccccacgagttcttcacgatccagtac 2136
>emb|AJ420285.1|LIN420285 Leishmania infantum cpa gene for cysteine proteinase Length = 1665 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagtac 358 ||||||||||||||||| |||||||||| Sbjct: 1026 gccccacgagttcttcacgatccagtac 999
>emb|AJ130942.1|LMA130942 Leishmania major (MRHO/IR/75/ER), amastigote cpa gene encoding cysteine proteinase A Length = 697 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagtac 358 ||||||||||||||||| |||||||||| Sbjct: 562 gccccacgagttcttcacgatccagtac 535
>gb|AF462226.1| Narcissus pseudonarcissus putative cysteine proteinase mRNA, partial cds Length = 631 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagta 357 |||||||||||||||| ||||||||||| Sbjct: 301 cgccccacgagttcttgatgatccagta 274
>gb|AF309687.1|AF309687 Leishmania donovani cysteine protease gene, complete cds Length = 1062 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagtac 358 ||||||||||||||||| |||||||||| Sbjct: 933 gccccacgagttcttcacgatccagtac 906
>gb|AF538038.1| Leishmania mexicana amazonensis cysteine proteinase (cys1) gene, complete cds Length = 1065 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagtac 358 ||||||||||||||||| |||||||||| Sbjct: 936 gccccacgagttcttcacgatccagtac 909
>gb|AY141759.1| Leishmania mexicana amazonensis clone 2A1 cysteine proteinase mRNA, complete cds Length = 1568 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagtac 358 ||||||||||||||||| |||||||||| Sbjct: 984 gccccacgagttcttcacgatccagtac 957
>gb|AY141758.1| Leishmania mexicana amazonensis clone 3A4 cysteine proteinase mRNA, complete cds Length = 2431 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagtac 358 ||||||||||||||||| |||||||||| Sbjct: 1102 gccccacgagttcttcacgatccagtac 1075
>gb|AY028171.1| Leishmania donovani extra chromosome XC290, partial sequence Length = 44273 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagtac 358 ||||||||||||||||| |||||||||| Sbjct: 27756 gccccacgagttcttcacgatccagtac 27729
>gb|AF004593.2|AF004593 Leishmania donovani chagasi promastigote-specific cysteine protease (ldccys2) gene, complete cds Length = 2684 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagtac 358 ||||||||||||||||| |||||||||| Sbjct: 1291 gccccacgagttcttcacgatccagtac 1264
>gb|AC007217.5| Homo sapiens chromosome 16 clone RP11-167B4, complete sequence Length = 173929 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacacata 92 ||||||| |||||||||||||||||||| Sbjct: 141797 tacacatatatatgtatacacacacata 141824
>gb|AF242373.1|AF242373 Ipomoea batatas cysteine protease (SPCP2) mRNA, complete cds Length = 1195 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagta 357 |||||||||||||||| ||||||||||| Sbjct: 996 cgccccacgagttcttgatgatccagta 969
>gb|AC068039.6| Homo sapiens BAC clone RP11-703L16 from 2, complete sequence Length = 199514 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 77 tgtatacacacacatacaatctta 100 |||||||||||||||||||||||| Sbjct: 97467 tgtatacacacacatacaatctta 97490
>gb|AF138266.1|AF138266 Ipomoea batatas papain-like cysteine proteinase isoform III (IBPCPIII) mRNA, complete cds Length = 1144 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagta 357 |||||||||||||||| ||||||||||| Sbjct: 1006 cgccccacgagttcttgatgatccagta 979
>gb|AF138265.1|AF138265 Ipomoea batatas papain-like cysteine proteinase isoform II (IBPCPII) mRNA, complete cds Length = 1143 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagta 357 |||||||||||||||| ||||||||||| Sbjct: 1006 cgccccacgagttcttgatgatccagta 979
>gb|AF138264.1|AF138264 Ipomoea batatas papain-like cysteine proteinase isoform I (IBPCPI) mRNA, complete cds Length = 1149 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagta 357 |||||||||||||||| ||||||||||| Sbjct: 1012 cgccccacgagttcttgatgatccagta 985
>gb|AF216785.1|AF216785 Ipomoea batatas papain-like cysteine proteinase isoform III (PCPIII) gene, complete cds Length = 1473 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagta 357 |||||||||||||||| ||||||||||| Sbjct: 1335 cgccccacgagttcttgatgatccagta 1308
>gb|AF216784.1|AF216784 Ipomoea batatas papain-like cysteine proteinase isoform II (PCPII) gene, complete cds Length = 1483 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagta 357 |||||||||||||||| ||||||||||| Sbjct: 1346 cgccccacgagttcttgatgatccagta 1319
>gb|AF216783.1|AF216783 Ipomoea batatas papain-like cysteine proteinase isoform I (PCPI) gene, complete cds Length = 1474 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagta 357 |||||||||||||||| ||||||||||| Sbjct: 1337 cgccccacgagttcttgatgatccagta 1310
>ref|XM_312033.2| Anopheles gambiae str. PEST ENSANGP00000022503 (ENSANGG00000016224), partial mRNA Length = 880 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagtac 358 ||||||||||||||| |||||||||||| Sbjct: 732 gccccacgagttcttgatgatccagtac 705
>ref|XM_312034.2| Anopheles gambiae str. PEST ENSANGP00000018713 (ENSANGG00000016224), partial mRNA Length = 1636 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagtac 358 ||||||||||||||| |||||||||||| Sbjct: 1488 gccccacgagttcttgatgatccagtac 1461
>tpe|BN000093.1|HVA000093 TPA: TPA_exp: Hordeum vulgare mRNA for putative cysteine proteinase precursor (sf42 gene) Length = 1438 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagta 357 |||||||||||||||| ||||||||||| Sbjct: 1041 cgccccacgagttcttgatgatccagta 1014
>gb|AY104312.1| Zea mays PCO074362 mRNA sequence Length = 2610 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagta 357 |||||||||||||||| ||||||||||| Sbjct: 1084 cgccccacgagttcttgatgatccagta 1057
>gb|AC111047.10| Mus musculus chromosome 3, clone RP23-176H24, complete sequence Length = 205473 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacaca 88 |||||||||||||||||||||||| Sbjct: 149057 tacacatctatatgtatacacaca 149034
>gb|AC169037.4| Mus musculus BAC clone RP23-85E20 from chromosome 16, complete sequence Length = 184591 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 68 acatctatatgtatacacacacat 91 |||||||||||||||||||||||| Sbjct: 2857 acatctatatgtatacacacacat 2880
>gb|L29168.1|LEICYSTPRO Leishmania pifanoi cysteine proteinase gene, complete cds Length = 1377 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagtac 358 ||||||||||||||||| |||||||||| Sbjct: 1136 gccccacgagttcttcacgatccagtac 1109
>dbj|D45402.1|MZECP Corn mRNA for cysteine proteinase, clone CCP, complete cds Length = 1311 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 330 cgccccacgagttcttcatgatccagta 357 |||||||||||||||| ||||||||||| Sbjct: 1023 cgccccacgagttcttgatgatccagta 996
>gb|AC115905.8| Mus musculus chromosome 1, clone RP24-472N17, complete sequence Length = 173914 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 70 atctatatgtatacacacacata 92 ||||||||||||||||||||||| Sbjct: 59683 atctatatgtatacacacacata 59705
>gb|BT016603.1| Zea mays clone Contig436 mRNA sequence Length = 1526 Score = 46.1 bits (23), Expect = 0.092 Identities = 35/39 (89%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagtacttggtgccgtc 369 ||||||||||||||| | | |||||||||||||||||| Sbjct: 1116 gccccacgagttcttgaccagccagtacttggtgccgtc 1078
>gb|AY251054.1| Anthurium andraeanum cysteine protease mRNA, complete cds Length = 1814 Score = 46.1 bits (23), Expect = 0.092 Identities = 32/35 (91%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagtacttggtgcc 366 |||||||||||||||| ||||||||| | |||||| Sbjct: 1104 ccccacgagttcttcacgatccagtagtcggtgcc 1070
>gb|AC101796.8| Mus musculus chromosome 1, clone RP24-206P18, complete sequence Length = 171181 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 acatctatatgtatacacacacataca 94 |||| |||||||||||||||||||||| Sbjct: 136874 acatatatatgtatacacacacataca 136900
>gb|AC121589.3| Mus musculus BAC clone RP23-281G14 from chromosome 3, complete sequence Length = 215395 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 72 ctatatgtatacacacacataca 94 ||||||||||||||||||||||| Sbjct: 199939 ctatatgtatacacacacataca 199917
>gb|AY504968.1| Iris hollandica putative cysteine protease 3 (CYS3) mRNA, complete cds Length = 1286 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagtac 358 |||||||||||||| |||||||||||| Sbjct: 965 ccccacgagttctttatgatccagtac 939
>gb|AC133214.3| Mus musculus BAC clone RP23-72A15 from chromosome 10, complete sequence Length = 157067 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 acatctatatgtatacacacacataca 94 |||| |||||||||||||||||||||| Sbjct: 85505 acatatatatgtatacacacacataca 85531
>gb|AC132238.3| Mus musculus BAC clone RP24-532D9 from chromosome 2, complete sequence Length = 164293 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 69829 acacatatatatgtatacacacacata 69855
>gb|AC004626.1|HUAC004626 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-427H10, complete sequence Length = 157838 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 33293 acacatatatatgtatacacacacata 33267
>gb|AC124415.4| Mus musculus BAC clone RP24-298J2 from chromosome 10, complete sequence Length = 160137 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 68 acatctatatgtatacacacacataca 94 |||| |||||||||||||||||||||| Sbjct: 136160 acatatatatgtatacacacacataca 136134
>ref|XM_536212.2| PREDICTED: Canis familiaris similar to Cathepsin H precursor (LOC479065), mRNA Length = 1206 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 331 gccccacgagttcttcatgatccagta 357 ||||||||||||||||| ||||||||| Sbjct: 819 gccccacgagttcttcacgatccagta 793
>gb|AC161054.3| Mus musculus BAC clone RP23-381H23 from chromosome 10, complete sequence Length = 202932 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 acatctatatgtatacacacacataca 94 |||| |||||||||||||||||||||| Sbjct: 182214 acatatatatgtatacacacacataca 182240
>gb|AC163994.4| Mus musculus chromosome 1, clone RP24-132H2, complete sequence Length = 160383 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 acatctatatgtatacacacacataca 94 |||| |||||||||||||||||||||| Sbjct: 157975 acatatatatgtatacacacacataca 158001
>emb|AL731856.14| Human DNA sequence from clone RP11-647P3 on chromosome 9, complete sequence Length = 51132 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 6172 acacatatatatgtatacacacacata 6198 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacata 92 |||||||||||||||||||| Sbjct: 6139 tatatgtatacacacacata 6158
>emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chromosome 2, complete sequence Length = 201265 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 39164 acacatatatatgtatacacacacata 39190
>gb|AC130459.2| Homo sapiens chromosome 16 clone CTA-427H10, complete sequence Length = 157462 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 124525 acacatatatatgtatacacacacata 124551
>gb|AC103596.2| Homo sapiens chromosome 1 clone RP4-669H10, complete sequence Length = 121021 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 68 acatctatatgtatacacacacataca 94 |||| |||||||||||||||||||||| Sbjct: 82492 acatatatatgtatacacacacataca 82466
>gb|AC093006.4| Homo sapiens 3 BAC RP11-394D14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 215577 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 70 atctatatgtatacacacacata 92 ||||||||||||||||||||||| Sbjct: 23778 atctatatgtatacacacacata 23756
>gb|AC109474.2| Homo sapiens chromosome 5 clone RP11-414I19, complete sequence Length = 180650 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 atatgtatacacacacatacaat 96 ||||||||||||||||||||||| Sbjct: 17250 atatgtatacacacacatacaat 17228 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 tatatgtatacacacacatacaat 96 ||||| |||||||||||||||||| Sbjct: 71021 tatatatatacacacacatacaat 70998
>gb|AC092295.2| Homo sapiens chromosome 19 clone CTD-2630F21, complete sequence Length = 165566 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacatacaa 95 ||||||||||||||||||||||| Sbjct: 104748 tatatgtatacacacacatacaa 104726
>gb|AC074138.5| Homo sapiens chromosome 19 clone CTD-3234P18, complete sequence Length = 200418 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacatacaa 95 ||||||||||||||||||||||| Sbjct: 12031 tatatgtatacacacacatacaa 12009
>gb|AC010490.6| Homo sapiens chromosome 5 clone CTD-2333M24, complete sequence Length = 127188 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 atatgtatacacacacatacaat 96 ||||||||||||||||||||||| Sbjct: 114246 atatgtatacacacacatacaat 114224
>gb|AC154450.3| Mus musculus BAC clone RP24-169J2 from chromosome 12, complete sequence Length = 168477 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 104835 acacatatatatgtatacacacacata 104809 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 104815 acacatatatatgtatacacacacata 104789
>gb|AC093085.4| Homo sapiens BAC clone RP11-732M2 from 2, complete sequence Length = 97959 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 52836 acacatatatatgtatacacacacata 52862
>gb|AC109135.2| Homo sapiens chromosome 1 clone RP11-240C17, complete sequence Length = 175099 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 83500 acacatatatatgtatacacacacata 83526
>gb|AC138625.1| Homo sapiens chromosome 16 clone RP11-23E19, complete sequence Length = 152884 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 106898 acacatatatatgtatacacacacata 106924
>gb|AC009756.9|AC009756 Homo sapiens, clone RP11-45P2, complete sequence Length = 178624 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacatacaa 95 ||||||||||||||||||||||| Sbjct: 110200 tatatgtatacacacacatacaa 110178 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 9070 tatatgtatacacacacataca 9091
>gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome 14, complete sequence Length = 172103 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacat 91 ||||||| ||||||||||||||||||| Sbjct: 145532 tacacatatatatgtatacacacacat 145506
>dbj|AK109160.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-G07, full insert sequence Length = 1304 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Minus Query: 317 tcgccccacgacccgccccacgagttcttca 347 |||||||||||| ||||||||||||||||| Sbjct: 1017 tcgccccacgacgtgccccacgagttcttca 987
>gb|AY112469.1| Zea mays CL13598_-2 mRNA sequence Length = 606 Score = 46.1 bits (23), Expect = 0.092 Identities = 35/39 (89%) Strand = Plus / Plus Query: 331 gccccacgagttcttcatgatccagtacttggtgccgtc 369 ||||||||||||||| | | |||||||||||||||||| Sbjct: 330 gccccacgagttcttgaccagccagtacttggtgccgtc 368
>gb|AY111799.1| Zea mays CL872_-2 mRNA sequence Length = 1761 Score = 46.1 bits (23), Expect = 0.092 Identities = 50/59 (84%) Strand = Plus / Minus Query: 299 atcctgacgtagccgccctcgccccacgacccgccccacgagttcttcatgatccagta 357 |||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1128 atccggacgtacccggcctcgccccactgggtgccccacgagttcttcacgatccagta 1070
>gb|AY109437.1| Zea mays CL903_-1 mRNA sequence Length = 1664 Score = 46.1 bits (23), Expect = 0.092 Identities = 44/51 (86%) Strand = Plus / Minus Query: 307 gtagccgccctcgccccacgacccgccccacgagttcttcatgatccagta 357 |||||||||||| ||||| || ||||||||||||||| | ||||||||| Sbjct: 1075 gtagccgccctctccccaggaagggccccacgagttcttgacgatccagta 1025
>gb|AC007103.4|AC007103 Homo sapiens chromosome 4 clone C0190D22 map 4p16, complete sequence Length = 181571 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacatacaa 95 ||||||||||||||||||||||| Sbjct: 73898 tatatgtatacacacacatacaa 73876
>gb|AF019146.1|AF019146 Zea mays cysteine proteinase Mir2 (mir2) mRNA, complete cds Length = 1761 Score = 46.1 bits (23), Expect = 0.092 Identities = 50/59 (84%) Strand = Plus / Minus Query: 299 atcctgacgtagccgccctcgccccacgacccgccccacgagttcttcatgatccagta 357 |||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1128 atccggacgtacccggcctcgccccactgggtgccccacgagttcttcacgatccagta 1070
>emb|CT010473.14| Mouse DNA sequence from clone RP23-238D5 on chromosome 17, complete sequence Length = 173998 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 72 ctatatgtatacacacacataca 94 ||||||||||||||||||||||| Sbjct: 71171 ctatatgtatacacacacataca 71193
>gb|AC138112.4| Mus musculus BAC clone RP24-291E8 from 3, complete sequence Length = 173988 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Plus Query: 66 acacatctatatgtatacacacacatacaat 96 |||||| |||||||||||||||||| ||||| Sbjct: 106654 acacatttatatgtatacacacacacacaat 106684
>gb|AC131779.4| Mus musculus BAC clone RP24-336D11 from 8, complete sequence Length = 171978 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacatacaa 95 ||||||||||||||||||||||| Sbjct: 112576 tatatgtatacacacacatacaa 112554
>gb|AC122493.4| Mus musculus BAC clone RP24-392M11 from 3, complete sequence Length = 161477 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 72 ctatatgtatacacacacataca 94 ||||||||||||||||||||||| Sbjct: 3874 ctatatgtatacacacacataca 3852
>emb|CT025562.10| Mouse DNA sequence from clone RP24-225O12 on chromosome 14, complete sequence Length = 194430 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacacat 91 ||||||| ||||||||||||||||||| Sbjct: 149614 tacacatatatatgtatacacacacat 149640
>gb|AC130716.3| Mus musculus BAC clone RP23-463B12 from 3, complete sequence Length = 172517 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 68 acatctatatgtatacacacacataca 94 |||| |||||||||||||||||||||| Sbjct: 78217 acatatatatgtatacacacacataca 78191
>gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, complete sequence Length = 170607 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 45589 acacatatatatgtatacacacacata 45563
>emb|CT476806.2| Pan troglodytes chromosome X BAC RP43-032D14, complete sequence Length = 145919 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 68 acatctatatgtatacacacaca 90 ||||||||||||||||||||||| Sbjct: 71098 acatctatatgtatacacacaca 71076
>emb|AL645791.14| Mouse DNA sequence from clone RP23-465A12 on chromosome 11, complete sequence Length = 200883 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 106715 acacatatatatgtatacacacacata 106689 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 106619 acacatatatatgtatacacacacata 106593
>emb|AL772389.10| Mouse DNA sequence from clone RP23-106D7 on chromosome 2, complete sequence Length = 211326 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 201989 acacatatatatgtatacacacacata 201963
>emb|AL833778.5| Mouse DNA sequence from clone RP23-404M22 on chromosome X, complete sequence Length = 199554 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacatacaa 95 ||||||||||||||||||||||| Sbjct: 32715 tatatgtatacacacacatacaa 32693 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 94160 tatatgtatacacacacataca 94139 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacata 92 |||||||||||||||||||| Sbjct: 134614 tatatgtatacacacacata 134595
>gb|AC165089.5| Mus musculus BAC clone RP23-85H2 from chromosome 19, complete sequence Length = 247216 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacata 92 |||||| |||||||||||||||||||| Sbjct: 116492 acacatatatatgtatacacacacata 116466
>gb|AC102140.15| Mus musculus chromosome 3, clone RP23-286J21, complete sequence Length = 192833 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 119327 tatatgtatacacacacataca 119306
>ref|NM_120069.3| Arabidopsis thaliana RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type peptidase AT4G39090 (RD19) mRNA, complete cds Length = 2514 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagta 357 |||||||||||||| ||||||||||| Sbjct: 1151 ccccacgagttcttgatgatccagta 1126
>ref|NM_120068.3| Arabidopsis thaliana ATPase AT4G39080 mRNA, complete cds Length = 4147 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 332 ccccacgagttcttcatgatccagta 357 |||||||||||||| ||||||||||| Sbjct: 3736 ccccacgagttcttgatgatccagta 3761
>gb|AC102081.15| Mus musculus chromosome 18, clone RP23-43H5, complete sequence Length = 245125 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 174842 tatatgtatacacacacataca 174863
>gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5, complete sequence Length = 219218 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacaca 90 ||||||| |||||||||||||||||| Sbjct: 216655 tacacatatatatgtatacacacaca 216630
>gb|AC151577.2| Mus musculus BAC clone RP23-371D23 from chromosome 5, complete sequence Length = 206735 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacaca 90 ||||||| |||||||||||||||||| Sbjct: 56804 tacacatatatatgtatacacacaca 56829
>ref|NM_187324.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1415 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagta 357 |||||||||||||| ||||||||||| Sbjct: 1044 ccccacgagttcttgatgatccagta 1019
>ref|XM_476390.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1059 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagta 357 |||||||||||||| ||||||||||| Sbjct: 953 ccccacgagttcttgatgatccagta 928
>gb|BT018299.1| Zea mays clone EL01T0206B09.c mRNA sequence Length = 1209 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagta 357 |||||||||||||| ||||||||||| Sbjct: 890 ccccacgagttcttgatgatccagta 865
>gb|AC105080.8| Mus musculus chromosome 3, clone RP24-313N2, complete sequence Length = 195212 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacaca 90 ||||||| |||||||||||||||||| Sbjct: 13243 tacacatatatatgtatacacacaca 13218
>gb|AC165358.3| Mus musculus BAC clone RP23-122F14 from chromosome 1, complete sequence Length = 223166 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 197995 tatatgtatacacacacataca 198016
>gb|AC102440.12| Mus musculus chromosome 1, clone RP24-146C18, complete sequence Length = 144770 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 58461 tatatgtatacacacacataca 58482
>gb|AC138741.7| Mus musculus chromosome 1, clone RP24-260D21, complete sequence Length = 161846 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 cacatctatatgtatacacacacata 92 ||||| |||||||||||||||||||| Sbjct: 101028 cacatatatatgtatacacacacata 101053
>gb|AC116399.7| Mus musculus chromosome 8, clone RP23-122B13, complete sequence Length = 167868 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 21441 tatatgtatacacacacataca 21462
>gb|AC144460.31| Mus musculus strain C57BL/6J clone rp23-109m13, complete sequence Length = 212991 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 100615 tatatgtatacacacacataca 100636
>gb|AC131989.8| Mus musculus chromosome 14, clone RP24-186N15, complete sequence Length = 180932 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacaca 90 ||||||||||||| |||||||||||| Sbjct: 88847 tacacatctatatctatacacacaca 88872
>gb|AC182645.3| Pan troglodytes BAC clone CH251-7F19 from chromosome 10, complete sequence Length = 221731 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacaca 90 ||||||| |||||||||||||||||| Sbjct: 193569 tacacatatatatgtatacacacaca 193594 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacata 92 ||||||| ||||| |||||||||||||| Sbjct: 194784 tacacatatatatatatacacacacata 194757
>gb|AC123650.7| Mus musculus chromosome 1, clone RP23-124N16, complete sequence Length = 220806 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 169352 tatatgtatacacacacataca 169331
>gb|AC161767.4| Pan troglodytes BAC clone CH251-365K8 from chromosome 7, complete sequence Length = 148248 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 133122 tatatgtatacacacacataca 133143
>gb|AC161127.3| Pan troglodytes BAC clone CH251-452P2 from chromosome 7, complete sequence Length = 205655 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 15816 tatatgtatacacacacataca 15837
>gb|AC119893.9| Mus musculus chromosome 1, clone RP24-225A6, complete sequence Length = 179453 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 173022 tatatgtatacacacacataca 173043
>gb|AC120787.14| Mus musculus chromosome 15, clone RP24-180L12, complete sequence Length = 156603 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| || ||||||||||||||||||| Sbjct: 115337 tacacatatacatgtatacacacacataca 115308
>gb|AC134576.3| Mus musculus BAC clone RP24-68G10 from chromosome 18, complete sequence Length = 249301 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 117018 tatatgtatacacacacataca 116997
>gb|AC145571.3| Mus musculus BAC clone RP24-450H18 from chromosome Y, complete sequence Length = 212589 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 60371 tatatgtatacacacacataca 60392
>gb|DQ192032.1|DQ192032S1 Stizostedion vitreum vitreum putative calpain-like protein gene, exons 1 through 14 Length = 10677 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| ||||| |||||||||||||||| Sbjct: 10438 tacacatatatatatatacacacacataca 10409
>gb|AC034116.10| Mus musculus chromosome 16, clone RP23-428P5, complete sequence Length = 210023 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 15182 tatatgtatacacacacataca 15161
>gb|AC164575.7| Mus musculus 10 BAC RP23-455M6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196723 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 66 acacatctatatgtatacacacacatacaa 95 |||||| ||||| ||||||||||||||||| Sbjct: 49936 acacatatatatatatacacacacatacaa 49965
>gb|AC164103.5| Mus musculus BAC clone RP23-427D2 from chromosome 5, complete sequence Length = 188588 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 66154 tatatgtatacacacacataca 66133
>gb|AC121286.7| Mus musculus chromosome 12, clone RP23-36H21, complete sequence Length = 227648 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 75845 tatatgtatacacacacataca 75824
>gb|AC133890.16| Mus musculus chromosome 10, clone RP23-339N24, complete sequence Length = 211758 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacaca 90 ||||||| |||||||||||||||||| Sbjct: 23364 tacacatatatatgtatacacacaca 23389
>gb|AC138093.7| Mus musculus chromosome 16, clone RP24-559J21, complete sequence Length = 123569 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 2236 tatatgtatacacacacataca 2257
>gb|AY504966.1| Iris hollandica putative cysteine protease 1 (CYS1) mRNA, complete cds Length = 1171 Score = 44.1 bits (22), Expect = 0.36 Identities = 49/58 (84%) Strand = Plus / Minus Query: 315 cctcgccccacgacccgccccacgagttcttcatgatccagtacttggtgccgtcgct 372 |||| ||||||||| ||||| |||||||||| | |||||||||||| |||||||| Sbjct: 937 cctcaccccacgacgtcccccatgagttcttcaccaaccagtacttggttccgtcgct 880
>gb|AC118689.16| Mus musculus chromosome 10, clone RP23-293N21, complete sequence Length = 163917 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacaca 90 ||||||| |||||||||||||||||| Sbjct: 109713 tacacatatatatgtatacacacaca 109738
>gb|AC131341.3| Mus musculus BAC clone RP24-263O10 from chromosome 17, complete sequence Length = 152220 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 85475 tatatgtatacacacacataca 85496
>gb|AC134438.3| Mus musculus BAC clone RP24-470G3 from chromosome 5, complete sequence Length = 140395 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 16253 tatatgtatacacacacataca 16274
>gb|AC124494.4| Mus musculus BAC clone RP23-464P12 from chromosome 13, complete sequence Length = 204177 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 13015 tatatgtatacacacacataca 13036
>gb|AC130548.3| Mus musculus BAC clone RP24-456F12 from chromosome 5, complete sequence Length = 170929 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacaca 90 ||||||| |||||||||||||||||| Sbjct: 130019 tacacatatatatgtatacacacaca 130044
>gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosome 5, complete sequence Length = 170182 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 45296 tatatgtatacacacacataca 45275
>gb|AC110517.9| Mus musculus chromosome 17, clone RP23-13F15, complete sequence Length = 218657 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 124972 tatatgtatacacacacataca 124951
>gb|AC123864.4| Mus musculus BAC clone RP23-365B24 from chromosome 8, complete sequence Length = 128447 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| |||||||||||||| ||||||| Sbjct: 35258 tacacatatatatgtatacacatacataca 35287
>gb|AC123058.3| Mus musculus BAC clone RP23-188J8 from 19, complete sequence Length = 194636 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 110420 tatatgtatacacacacataca 110399 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacataca 94 |||||| |||||||| ||||||||||||| Sbjct: 110307 acacatatatatgtacacacacacataca 110279 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacaca 90 |||||| |||||||||||||||||| Sbjct: 110253 acacatatatatgtatacacacaca 110229 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacataca 94 |||||| |||||||| ||||||||||||| Sbjct: 110231 acacatatatatgtacacacacacataca 110203
>gb|AC124519.2| Mus musculus BAC clone RP23-393I12 from 1, complete sequence Length = 195739 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 176583 tatatgtatacacacacataca 176562
>gb|AC121811.2| Mus musculus BAC clone RP23-453O15 from 5, complete sequence Length = 190798 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 17945 tatatgtatacacacacataca 17924
>gb|AC121917.2| Mus musculus BAC clone RP24-194F23 from 5, complete sequence Length = 178113 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 9097 tatatgtatacacacacataca 9118
>gb|AC092590.2| Homo sapiens BAC clone RP11-45K3 from 7, complete sequence Length = 127836 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 3509 tatatgtatacacacacataca 3488
>gb|AC113502.10| Mus musculus chromosome 8, clone RP23-368K14, complete sequence Length = 171107 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 137431 tatatgtatacacacacataca 137452
>gb|AC123714.6| Mus musculus chromosome 9, clone RP23-393E20, complete sequence Length = 217860 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 36756 tatatgtatacacacacataca 36777
>emb|CR792428.10| Zebrafish DNA sequence from clone CH211-148F24 in linkage group 3, complete sequence Length = 120268 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| ||||| |||||||||||||||| Sbjct: 23459 tacacatatatatatatacacacacataca 23488
>emb|Z98950.1|HS507I15 Human DNA sequence from clone RP3-507I15 on chromosome Xq26.3-27.3 Contains a ribosomal protein L36a (RPL36A) pseudogene, complete sequence Length = 123556 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| ||||| |||||||||||||||| Sbjct: 94657 tacacatatatatatatacacacacataca 94628
>emb|Z96811.2|HS52D1 Human DNA sequence from clone RP1-52D1 on chromosome Xq21, complete sequence Length = 148691 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacat 91 |||||| ||||||||||||||||||| Sbjct: 20949 acacatatatatgtatacacacacat 20924
>emb|AL590966.10| Human DNA sequence from clone RP11-191N8 on chromosome 1 Contains the DUSP10 gene for dual specificity phosphatase 10 (DUSP10), a novel gene and a CpG island, complete sequence Length = 165588 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 88569 tatatgtatacacacacataca 88548
>emb|AL590011.5| Human DNA sequence from clone RP11-88K15 on chromosome 6 Contains part of the RAB3IP2 gene for RAB3 interacting protein 2 and one CpG island, complete sequence Length = 154979 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 29260 tatatgtatacacacacataca 29281
>emb|AL359842.14| Human DNA sequence from clone RP11-388D4 on chromosome 13 Contains a peroxisomal biogenesis factor 12 (PEX12) pseudogene, complete sequence Length = 136943 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 22499 tatatgtatacacacacataca 22478
>emb|AL359258.23| Human DNA sequence from clone RP11-483I13 on chromosome 1 Contains the 5' end of the SLC25A24 gene for solute carrier family 25 (mitochondrial carrier; phosphate carrier) member 24, the gene for a novel protein, two novel genes, a pseudogene similar to solute carrier family 25 (mitochondrial carrier; phosphate carrier) member 24 (SLC25A24) and two CpG islands, complete sequence Length = 188622 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 12549 tatatgtatacacacacataca 12528
>emb|AL353811.12| Human DNA sequence from clone RP11-482I10 on chromosome 9, complete sequence Length = 190651 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacaca 90 ||||||| |||||||||||||||||| Sbjct: 160318 tacacatatatatgtatacacacaca 160343
>emb|AL354938.12| Human DNA sequence from clone RP11-86L19 on chromosome 9 Contains the 3' end of the SMC2L1 gene for SMC2 structural maintenance of chromosomes 2-like 1 (yeast) (CAPE, CAP-E, hCAP-E), a novel pseudogene and a CpG island, complete sequence Length = 179738 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| ||||| |||||||||||||||| Sbjct: 151348 tacacatatatatatatacacacacataca 151319
>emb|AL354752.11| Human DNA sequence from clone RP11-570O20 on chromosome Xq27.1-27.3, complete sequence Length = 69126 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 17637 tatatgtatacacacacataca 17616
>emb|AL158812.10| Human DNA sequence from clone RP11-157E11 on chromosome 13, complete sequence Length = 173538 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 37307 tatatgtatacacacacataca 37328
>emb|AL157389.12| Human DNA sequence from clone RP11-248C1 on chromosome 10 Contains the 3' end of the MPHOSPH1 gene for M-phase phosphoprotein 1, a novel gene (DKFZp434P0810) and a CpG island, complete sequence Length = 134267 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 92477 tatatgtatacacacacataca 92498
>emb|AL136226.9| Human DNA sequence from clone RP3-486D24 on chromosome 6 Contains a ribosomal protein L7A (RPL7A) pseudogene and a CpG island, complete sequence Length = 72553 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 ctatatgtatacacacacatac 93 |||||||||||||||||||||| Sbjct: 22372 ctatatgtatacacacacatac 22393
>emb|AL121916.14|HSJ189G13 Human DNA sequence from clone RP1-189G13 on chromosome 20 Contains the RPL7AL2 gene for ribosomal protein L7a like 2 (pseudogene) and part of a ribosomal protein S4 pseudogene, complete sequence Length = 100167 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacat 91 |||||| ||||||||||||||||||| Sbjct: 64050 acacatatatatgtatacacacacat 64025
>emb|AL050308.9|HSG164F24 Human DNA sequence from clone GS1-164F24 on chromosome Xq26.3-27.3 Contains a NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3 (12kD, B12) (NDUFB3) pseudogene and part of a novel gene, complete sequence Length = 213084 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| ||||| |||||||||||||||| Sbjct: 52388 tacacatatatatatatacacacacataca 52417
>gb|AC158342.4| Mus musculus chromosome 1, clone RP23-12H12, complete sequence Length = 224295 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 188101 tatatgtatacacacacataca 188080
>emb|AL035469.7|HS46B1 Human DNA sequence from clone RP1-46B1 on chromosome 6q12, complete sequence Length = 158204 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 99338 tatatgtatacacacacataca 99359
>emb|AL021997.1|HS874C20 Human DNA sequence from clone RP5-874C20 on chromosome 6p22.1-22.3 Contains the 5' end of a novel protein similar to zinc finger protein 306 (ZNF306, ZFP47), the gene for a novel C2H2 type zinc finger protein, a novel gene, a zinc finger protein SRE-ZBP pseudogene and a CpG island, complete sequence Length = 97847 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 79632 tatatgtatacacacacataca 79611
>gb|AC093331.9| Homo sapiens chromosome 8, clone RP11-59O2, complete sequence Length = 170974 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 74429 tatatgtatacacacacataca 74408
>emb|Z99953.1|PVZ99953 Phaseolus vulgaris Moldavian encoding cysteine proteinase precursor (clone cp41) Length = 1376 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagta 357 |||||||||||||| ||||||||||| Sbjct: 992 ccccacgagttcttgatgatccagta 967
>gb|AY133844.1| Arabidopsis thaliana clone U11713 putative cysteine proteinase RD19A (At4g39090) mRNA, complete cds Length = 1138 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagta 357 |||||||||||||| ||||||||||| Sbjct: 995 ccccacgagttcttgatgatccagta 970
>gb|AY080598.1| Arabidopsis thaliana putative cysteine proteinase RD19A (At4g39090) mRNA, complete cds Length = 1249 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 332 ccccacgagttcttcatgatccagta 357 |||||||||||||| ||||||||||| Sbjct: 1004 ccccacgagttcttgatgatccagta 979
>gb|AC084026.14| Homo sapiens chromosome 8, clone RP11-486M23, complete sequence Length = 185759 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 183968 tatatgtatacacacacataca 183947
>gb|AC153499.7| Mus musculus 10 BAC RP23-478J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207222 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacaca 90 ||||||| |||||||||||||||||| Sbjct: 42924 tacacatatatatgtatacacacaca 42899
>gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chromosome unknown, complete sequence Length = 201789 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacaca 90 |||||||||||||||||| ||||||| Sbjct: 136720 tacacatctatatgtatatacacaca 136695
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 332 ccccacgagttcttcatgatccagta 357 |||||||||||||| ||||||||||| Sbjct: 130093 ccccacgagttcttgatgatccagta 130118
>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project) Length = 100469 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 332 ccccacgagttcttcatgatccagta 357 |||||||||||||| ||||||||||| Sbjct: 92083 ccccacgagttcttgatgatccagta 92108
>emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in linkage group 17, complete sequence Length = 193986 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| ||||| |||||||||||||||| Sbjct: 99297 tacacatatatatatatacacacacataca 99326
>emb|AL645609.21| Mouse DNA sequence from clone RP23-432O10 on chromosome 11 Contains the 5' end of the Spred2 gene for sprouty protein with EVH-1 domain 2, related sequence and two CpG islands, complete sequence Length = 121493 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacaca 90 ||||||| |||||||||||||||||| Sbjct: 85296 tacacatatatatgtatacacacaca 85271
>emb|BX000995.12| Mouse DNA sequence from clone RP23-106K17 on chromosome 11 Contains a protease pseuodogene, complete sequence Length = 189417 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 64365 tatatgtatacacacacataca 64344
>emb|AL645752.9| Mouse DNA sequence from clone RP23-244K22 on chromosome 11 Contains the 5' end of the Gabra1 gene for gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1, complete sequence Length = 116840 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 75591 tatatgtatacacacacataca 75612
>emb|AL672209.7| Mouse DNA sequence from clone RP23-296N19 on chromosome 11, complete sequence Length = 17284 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 8462 tatatgtatacacacacataca 8441
>emb|AL603984.7| Mouse DNA sequence from clone RP23-137B16 on chromosome 11 Contains a novel gene, the 5' end of the Meis1 gene for myeloid ecotropic viral integration site 1 and two Cpg islands, complete sequence Length = 224602 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacat 91 |||||| ||||||||||||||||||| Sbjct: 108329 acacatatatatgtatacacacacat 108304
>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence Length = 253733 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacaca 90 ||||||| |||||||||||||||||| Sbjct: 61273 tacacatatatatgtatacacacaca 61248
>gb|AC158900.4| Mus musculus chromosome 5, clone RP23-168G15, complete sequence Length = 211621 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 125495 tatatgtatacacacacataca 125474
>gb|AC090480.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-248L18, Complete Sequence, complete sequence Length = 231039 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 527 tatatgtatacacacacataca 506
>gb|AC087698.5| Homo sapiens chromosome 8, clone RP11-25K19, complete sequence Length = 150750 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 86180 tatatgtatacacacacataca 86159
>emb|CR382328.14| Mouse DNA sequence from clone RP23-315J18 on chromosome X, complete sequence Length = 215381 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 21690 tatatgtatacacacacataca 21711
>gb|AC108519.4| Homo sapiens BAC clone RP11-1286E23 from 4, complete sequence Length = 172366 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| ||||| |||||||||||||||| Sbjct: 40050 tacacatatatatatatacacacacataca 40021
>gb|AC099771.9| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-72621, Complete Sequence, complete sequence Length = 256933 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 19285 tatatgtatacacacacataca 19306
>gb|AC099772.3| Mus Musculus Chromosome 5 RP23-319P12 Strain C57Bl6/J, complete sequence Length = 190514 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 173839 tatatgtatacacacacataca 173860
>gb|AC104826.5| Homo sapiens BAC clone RP11-775M3 from 4, complete sequence Length = 138604 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| |||||||||| ||||||||||| Sbjct: 95547 tacacatatatatgtatatacacacataca 95576 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| |||||||||| ||||||||||| Sbjct: 95538 tacacatatatatgtatatacacacataca 95509
>gb|AC108140.4| Homo sapiens BAC clone RP11-395F4 from 4, complete sequence Length = 41700 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| |||||||||| ||||||||||| Sbjct: 30689 tacacatgtatatgtatatacacacataca 30718
>gb|AC104387.5| Homo sapiens chromosome 11, clone CTD-2566K14, complete sequence Length = 159765 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 38993 tatatgtatacacacacataca 39014 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacata 92 |||||||||||||||||||| Sbjct: 39056 tatatgtatacacacacata 39037
>gb|AC095061.3| Homo sapiens BAC clone RP11-439C3 from 4, complete sequence Length = 133316 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| ||||||| |||||||||||||| Sbjct: 24358 tacacatatatatgtgtacacacacataca 24329 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| ||||||| |||||||||||||| Sbjct: 24332 tacacatatatatgtgtacacacacataca 24303 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacataca 94 |||||| ||||||| |||||||||||||| Sbjct: 24303 acacatatatatgtgtacacacacataca 24275 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacataca 94 |||||| ||||||| |||||||||||||| Sbjct: 24275 acacatatatatgtgtacacacacataca 24247 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacataca 94 |||||| ||||||| |||||||||||||| Sbjct: 24247 acacatatatatgtgtacacacacataca 24219 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacataca 94 |||||| ||||||| |||||||||||||| Sbjct: 24219 acacatatatatgtgtacacacacataca 24191 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 66 acacatctatatgtatacacacacataca 94 |||||| ||||||| |||||||||||||| Sbjct: 24191 acacatatatatgtgtacacacacataca 24163
>gb|AC087466.5| Homo sapiens chromosome 15, clone RP11-97H17, complete sequence Length = 64810 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 18570 tatatgtatacacacacataca 18591
>gb|AC083934.3| Homo sapiens chromosome 8, clone RP11-108L23, complete sequence Length = 157749 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 33309 tatatgtatacacacacataca 33288
>dbj|AK138784.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430068H18 product:unclassifiable, full insert sequence Length = 3815 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacaca 90 ||||||| |||||||||||||||||| Sbjct: 3656 tacacatatatatgtatacacacaca 3681
>gb|AC024094.28| Homo sapiens 4 RP11-193M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161973 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacataca 94 ||||||| ||||| |||||||||||||||| Sbjct: 106511 tacacatatatatatatacacacacataca 106482
>gb|AC106787.2| Homo sapiens chromosome 5 clone RP11-365I6, complete sequence Length = 129667 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 85277 tatatgtatacacacacataca 85298
>gb|AC058822.6| Homo sapiens BAC clone RP11-809N18 from 4, complete sequence Length = 170212 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 tatatgtatacacacacataca 94 |||||||||||||||||||||| Sbjct: 88803 tatatgtatacacacacataca 88782
>gb|AC182491.2| Pan troglodytes BAC clone CH251-394K8 from chromosome 10, complete sequence Length = 168541 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tacacatctatatgtatacacacaca 90 ||||||| |||||||||||||||||| Sbjct: 37155 tacacatatatatgtatacacacaca 37180 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 65 tacacatctatatgtatacacacacata 92 ||||||| ||||| |||||||||||||| Sbjct: 38370 tacacatatatatatatacacacacata 38343 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,125,213 Number of Sequences: 3902068 Number of extensions: 4125213 Number of successful extensions: 228876 Number of sequences better than 10.0: 1309 Number of HSP's better than 10.0 without gapping: 1329 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 220533 Number of HSP's gapped (non-prelim): 8302 length of query: 423 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 401 effective length of database: 17,147,199,772 effective search space: 6876027108572 effective search space used: 6876027108572 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)