| Clone Name | rbaal3b12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PNO_CRYPV (Q968X7) Pyruvate dehydrogenase [NADP+] (EC 1.2.1.51) ... | 32 | 0.99 | 2 | BCSC_PSEFL (P58937) Cellulose synthase operon protein C precursor | 32 | 1.3 | 3 | OLIG3_MOUSE (Q6PFG8) Oligodendrocyte transcription factor 3 (Oli... | 30 | 4.9 | 4 | SWM1_YEAST (Q12379) Anaphase promoting complex subunit SWM1 (Spo... | 29 | 8.4 |
|---|
>PNO_CRYPV (Q968X7) Pyruvate dehydrogenase [NADP+] (EC 1.2.1.51) (Pyruvate:NADP+| oxidoreductase) (CpPNO) Length = 1934 Score = 32.3 bits (72), Expect = 0.99 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = -1 Query: 386 SNFRKGSTVNATFYSACPRNDLLTEGTFALVEKLNGNN 273 S K +T T +C RND+L E T L EKL+ NN Sbjct: 1452 SEIPKATTFKVTILDSC-RNDILNESTGTLCEKLDENN 1488
>BCSC_PSEFL (P58937) Cellulose synthase operon protein C precursor| Length = 1279 Score = 32.0 bits (71), Expect = 1.3 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Frame = -1 Query: 494 PPDMLEKQIGLLP-GVMYDSTPRGVHFGDVSSDVAANSNFRKGSTVNATFYSACPRNDLL 318 P L+ +G+ P G +Y++ GV VS ANSNFR G+ + S P D + Sbjct: 1001 PDQGLKADVGVSPLGFLYNTLVGGV---SVSRPFEANSNFRYGANI-----SRRPVTDSV 1052 Query: 317 TEGTFALVEKLNGNNW 270 T +FA E GN W Sbjct: 1053 T--SFAGSEDGAGNKW 1066
>OLIG3_MOUSE (Q6PFG8) Oligodendrocyte transcription factor 3 (Oligo3)| (Oligodendrocyte-specific bHLH transcription factor 3) (Basic helix-loop-helix domain-containing class B protein 7) Length = 273 Score = 30.0 bits (66), Expect = 4.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +2 Query: 248 HHHHRQESSCYHLASQQVQRCPQLEGHSLDR 340 HHHH QES ++S Q ++ G SL R Sbjct: 29 HHHHHQESRLNSVSSTQGDMVQKMPGESLSR 59
>SWM1_YEAST (Q12379) Anaphase promoting complex subunit SWM1 (Spore wall| maturation protein 1) (Anaphase promoting complex subunit 13) Length = 170 Score = 29.3 bits (64), Expect = 8.4 Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 5/150 (3%) Frame = -1 Query: 482 LEKQIGLLPGVMYDSTPRGVHFGDVSSDVAANSNFRKGSTVNATFYSACPRNDLLTEGTF 303 L ++ + M D+T G D NSN R+ + +G Sbjct: 34 LPDEVANITMAMKDNTRTDAEEGRAPQDGERNSNVRESA-----------------QGKA 76 Query: 302 ALVEKLNGNN-WIPVYDDDDWSLQFKWSRPSKFSPRSFATLEWTIPEDAASGVYRLRHSG 126 + + N N W +D+DDW+L + T + + +G R+ G Sbjct: 77 LMTSEQNSNRYWNSFHDEDDWNL----FNGMELESNGVVTFAGQAFDHSLNGGTNSRNDG 132 Query: 125 ASKP----LIGSIKHFTGTSRAFAVR*GIH 48 A++P + GSI T A+A G H Sbjct: 133 ANEPRKETITGSIFDRRITQLAYARNNGWH 162 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,149,118 Number of Sequences: 219361 Number of extensions: 1743267 Number of successful extensions: 4798 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4539 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4766 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)