ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2m12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550389.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-05
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
3dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
4dbj|AB232152.2| Chlamydomonas reinhardtii DHC9 mRNA for dynein h... 48 0.021
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.33
6dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.33
7dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.33
8gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 44 0.33
9emb|AJ323229.1|HSA323229 Homo sapiens genomic sequence surroundi... 42 1.3
10ref|NM_189630.1| Oryza sativa (japonica cultivar-group), Ozsa805... 40 5.2
11ref|XM_481337.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
12ref|XM_469168.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
13ref|XM_469167.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
14ref|NM_197238.1| Oryza sativa (japonica cultivar-group) putative... 40 5.2
15gb|DQ208934.1| Locusta migratoria odorant-binding protein 1b mRN... 40 5.2
16gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
17ref|XM_588771.2| PREDICTED: Bos taurus similar to metastasis ass... 40 5.2
18gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.2
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.2
20gb|AY224548.1| Oryza sativa (japonica cultivar-group) isolate 24... 40 5.2
21ref|XM_544737.2| PREDICTED: Canis familiaris similar to Mothers ... 40 5.2
22gb|AC145387.2| Oryza sativa chromosome 3 BAC OSJNBb0031A14 genom... 40 5.2
23emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete ch... 40 5.2
24gb|AC073330.6| Homo sapiens BAC clone RP11-409J21 from 7, comple... 40 5.2
25emb|AL050314.3|HSJ100G10 Human DNA sequence from clone RP1-100G1... 40 5.2
26emb|AL034553.12|HS914P20 Human DNA sequence from clone RP5-914P2... 40 5.2
27emb|X79146.1|SLLINC S.lincolnensis (78-11) Lincomycin production... 40 5.2
28gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 geno... 40 5.2
29emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.2
30gb|BC075794.1| Homo sapiens activity-dependent neuroprotector, t... 40 5.2
31gb|AC008751.7| Homo sapiens chromosome 19 clone CTD-2623H2, comp... 40 5.2
32gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytans... 40 5.2
33gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 5.2
34dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.2
35gb|AC020915.6|AC020915 Homo sapiens chromosome 19 clone CTD-3138... 40 5.2
36dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
37dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
38dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
39dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
40dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
41dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
42gb|AC137925.2| Oryza sativa chromosome 3 BAC OSJNBb0047D08 genom... 40 5.2
43gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
44dbj|AP005768.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
45dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
46dbj|AP003612.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
47dbj|AP005678.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
48dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
49dbj|AP002836.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
50dbj|AP002816.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
51dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.2
52dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.2
53dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
54dbj|AP005255.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
55dbj|AP005009.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
56dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-... 40 5.2
57dbj|AK111383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
58dbj|AK073375.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
59emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.2
60dbj|AK064094.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
61gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 40 5.2
62emb|AL732497.15| Mouse DNA sequence from clone RP23-130H14 on ch... 40 5.2
63gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
64emb|BX284657.1| Human DNA sequence from clone RP1-100G10 on chro... 40 5.2
65emb|AL683854.20| Mouse DNA sequence from clone RP23-237K13 on ch... 40 5.2
66emb|AL808102.8| Mouse DNA sequence from clone RP23-192O6 on chro... 40 5.2 
>ref|XM_550389.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1455

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                        
Query: 293  aggttcctctcggatgagccgcctacggccgccgccgcccgcgccttctccctccacagc 352
            |||||| |||| || ||||||||  ||||| ||||||||||||||||||| ||||||  |
Sbjct: 1421 aggttcttctccgacgagccgccgtcggccaccgccgcccgcgccttctctctccacgcc 1362

                                             
Query: 353  tctgccttggcgcgcaccacatccgaggtggcg 385
             | ||  ||||||||||| | ||||| ||||||
Sbjct: 1361 gccgcgctggcgcgcaccgcctccgacgtggcg 1329
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                           
Query: 293     aggttcctctcggatgagccgcctacggccgccgccgcccgcgccttctccctccacagc 352
               |||||| |||| || ||||||||  ||||| ||||||||||||||||||| ||||||  |
Sbjct: 4152223 aggttcttctccgacgagccgccgtcggccaccgccgcccgcgccttctctctccacgcc 4152282

                                                
Query: 353     tctgccttggcgcgcaccacatccgaggtggcg 385
                | ||  ||||||||||| | ||||| ||||||
Sbjct: 4152283 gccgcgctggcgcgcaccgcctccgacgtggcg 4152315



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 320     gccgccgccgcccgcgccttctcc 343
               ||||||||| ||||||||||||||
Sbjct: 4649331 gccgccgcctcccgcgccttctcc 4649308
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>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0406H10
          Length = 156419

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                         
Query: 293   aggttcctctcggatgagccgcctacggccgccgccgcccgcgccttctccctccacagc 352
             |||||| |||| || ||||||||  ||||| ||||||||||||||||||| ||||||  |
Sbjct: 99194 aggttcttctccgacgagccgccgtcggccaccgccgcccgcgccttctctctccacgcc 99253

                                              
Query: 353   tctgccttggcgcgcaccacatccgaggtggcg 385
              | ||  ||||||||||| | ||||| ||||||
Sbjct: 99254 gccgcgctggcgcgcaccgcctccgacgtggcg 99286
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>dbj|AB232152.2| Chlamydomonas reinhardtii DHC9 mRNA for dynein heavy chain 9,
            complete cds
          Length = 13205

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 320  gccgccgccgcccgcgccttctcc 343
            ||||||||||||||||||||||||
Sbjct: 1964 gccgccgccgcccgcgccttctcc 1987
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 130      tcgagtcctctcgtctcgtctcgtgt 155
                |||| |||||||||||||||||||||
Sbjct: 29224156 tcgactcctctcgtctcgtctcgtgt 29224181



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 320     gccgccgccgcccgcgcctt 339
               ||||||||||||||||||||
Sbjct: 8642830 gccgccgccgcccgcgcctt 8642811



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 320     gccgccgccgcccgcgcctt 339
               ||||||||||||||||||||
Sbjct: 8642749 gccgccgccgcccgcgcctt 8642730
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>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0597G07
          Length = 152928

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 130   tcgagtcctctcgtctcgtctcgtgt 155
             |||| |||||||||||||||||||||
Sbjct: 12845 tcgactcctctcgtctcgtctcgtgt 12870
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>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1165_F02
          Length = 125993

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 130   tcgagtcctctcgtctcgtctcgtgt 155
             |||| |||||||||||||||||||||
Sbjct: 64230 tcgactcctctcgtctcgtctcgtgt 64255
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 319     ggccgccgccgcccgcgccttc 340
               ||||||||||||||||||||||
Sbjct: 4242779 ggccgccgccgcccgcgccttc 4242800
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>emb|AJ323229.1|HSA323229 Homo sapiens genomic sequence surrounding NotI site, clone NB1-110R
          Length = 457

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gcctacggccgccgccgcccgcgcc 337
           |||| ||||||||||||||||||||
Sbjct: 155 gcctgcggccgccgccgcccgcgcc 131
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>ref|NM_189630.1| Oryza sativa (japonica cultivar-group), Ozsa8058 predicted mRNA
          Length = 843

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 320 gccgccgccgcccgcgccttctcc 343
           ||||||||| ||||||||||||||
Sbjct: 137 gccgccgcctcccgcgccttctcc 114
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>ref|XM_481337.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 547

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 gccgccgccgcccgcgcctt 339
           ||||||||||||||||||||
Sbjct: 122 gccgccgccgcccgcgcctt 103



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 gccgccgccgcccgcgcctt 339
           ||||||||||||||||||||
Sbjct: 65  gccgccgccgcccgcgcctt 46
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>ref|XM_469168.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1099

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 gccgccgccgcccgcgcctt 339
           ||||||||||||||||||||
Sbjct: 163 gccgccgccgcccgcgcctt 144
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>ref|XM_469167.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 854

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 gccgccgccgcccgcgcctt 339
           ||||||||||||||||||||
Sbjct: 149 gccgccgccgcccgcgcctt 130
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>ref|NM_197238.1| Oryza sativa (japonica cultivar-group) putative myosin-related
           protein (OSJNBa0062C05.4), mRNA
          Length = 3392

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 320 gccgccgccgcccgcgccttctcc 343
           ||||||||||||| ||||||||||
Sbjct: 656 gccgccgccgccctcgccttctcc 633
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>gb|DQ208934.1| Locusta migratoria odorant-binding protein 1b mRNA, partial cds
          Length = 456

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 319 ggccgccgccgcccgcgcct 338
           ||||||||||||||||||||
Sbjct: 45  ggccgccgccgcccgcgcct 64
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>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0062C05 map S21174S, complete sequence
          Length = 178867

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 320   gccgccgccgcccgcgccttctcc 343
             ||||||||||||| ||||||||||
Sbjct: 56221 gccgccgccgccctcgccttctcc 56198
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>ref|XM_588771.2| PREDICTED: Bos taurus similar to metastasis associated 1 (LOC511438),
            mRNA
          Length = 2919

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  cggccgccgccgcccgcgcc 337
            ||||||||||||||||||||
Sbjct: 2405 cggccgccgccgcccgcgcc 2424
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 320     gccgccgccgcccgcgcctt 339
               ||||||||||||||||||||
Sbjct: 2232621 gccgccgccgcccgcgcctt 2232602
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 320      gccgccgccgcccgcgcctt 339
                ||||||||||||||||||||
Sbjct: 25851618 gccgccgccgcccgcgcctt 25851637



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 320      gccgccgccgcccgcgccttctcc 343
                ||||||||||||| ||||||||||
Sbjct: 19355573 gccgccgccgccctcgccttctcc 19355596



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 320     gccgccgccgcccgcgcctt 339
               ||||||||||||||||||||
Sbjct: 8224257 gccgccgccgcccgcgcctt 8224276



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 320     gccgccgccgcccgcgcctt 339
               ||||||||||||||||||||
Sbjct: 8224176 gccgccgccgcccgcgcctt 8224195
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>gb|AY224548.1| Oryza sativa (japonica cultivar-group) isolate 24092 putative
           myosin mRNA, complete cds
          Length = 2949

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 320 gccgccgccgcccgcgccttctcc 343
           ||||||||||||| ||||||||||
Sbjct: 578 gccgccgccgccctcgccttctcc 555
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>ref|XM_544737.2| PREDICTED: Canis familiaris similar to Mothers against
           decapentaplegic homolog 6 (SMAD 6) (Mothers against DPP
           homolog 6) (Smad6) (hSMAD6) (LOC487612), mRNA
          Length = 1939

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 323 gccgccgcccgcgccttctc 342
           ||||||||||||||||||||
Sbjct: 594 gccgccgcccgcgccttctc 575
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>gb|AC145387.2| Oryza sativa chromosome 3 BAC OSJNBb0031A14 genomic sequence, complete
             sequence
          Length = 44761

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   gccgccgccgcccgcgcctt 339
             ||||||||||||||||||||
Sbjct: 22561 gccgccgccgcccgcgcctt 22580
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>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12
          Length = 273785

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   cggccgccgccgcccgcgcc 337
             ||||||||||||||||||||
Sbjct: 67045 cggccgccgccgcccgcgcc 67064
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>gb|AC073330.6| Homo sapiens BAC clone RP11-409J21 from 7, complete sequence
          Length = 155704

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 327  ccgcccgcgccttctccctccaca 350
            |||| |||||||||||||||||||
Sbjct: 1548 ccgctcgcgccttctccctccaca 1525
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>emb|AL050314.3|HSJ100G10 Human DNA sequence from clone RP1-100G10 on chromosome 22q13.31-13.33
            Contains GSSs, complete sequence
          Length = 6710

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 336  ccttctccctccacagctctgcct 359
            ||||||||||||||| ||||||||
Sbjct: 5095 ccttctccctccacaactctgcct 5118
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>emb|AL034553.12|HS914P20 Human DNA sequence from clone RP5-914P20 on chromosome 20q13.13-13.2
             Contains the ADNP gene for activity-dependent
             neuroprotector, the PSMD10P gene for proteasome (prosome,
             macropain) 26S subunit non-ATPase 10 pseudogene, the DPM1
             gene for dolichyl-phosphate mannosyltransferase catalytic
             subunit polypeptide 1, the MOCS3 gene for molybdenum
             cofactor synthesis 3 and two CpG islands, complete
             sequence
          Length = 105334

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   cggccgccgccgcccgcgcc 337
             ||||||||||||||||||||
Sbjct: 52580 cggccgccgccgcccgcgcc 52561
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>emb|X79146.1|SLLINC S.lincolnensis (78-11) Lincomycin production genes
          Length = 36270

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   cggccgccgccgcccgcgcc 337
             ||||||||||||||||||||
Sbjct: 20365 cggccgccgccgcccgcgcc 20346
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>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete
              sequence
          Length = 130058

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 320    gccgccgccgcccgcgccttctcc 343
              ||||||||||||| ||||||||||
Sbjct: 122078 gccgccgccgccctcgccttctcc 122055
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 320     gccgccgccgcccgcgcctt 339
               ||||||||||||||||||||
Sbjct: 2142074 gccgccgccgcccgcgcctt 2142093
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>gb|BC075794.1| Homo sapiens activity-dependent neuroprotector, transcript variant
           1, mRNA (cDNA clone MGC:87273 IMAGE:30342099), complete
           cds
          Length = 4942

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 cggccgccgccgcccgcgcc 337
           ||||||||||||||||||||
Sbjct: 81  cggccgccgccgcccgcgcc 100
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>gb|AC008751.7| Homo sapiens chromosome 19 clone CTD-2623H2, complete sequence
          Length = 169089

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 327    ccgcccgcgccttctccctccaca 350
              |||||||||||| |||||||||||
Sbjct: 137257 ccgcccgcgcctcctccctccaca 137234
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>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent
             ansamitocin biosynthetic gene cluster I, partial sequence
          Length = 82746

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   cggccgccgccgcccgcgcc 337
             ||||||||||||||||||||
Sbjct: 55592 cggccgccgccgcccgcgcc 55573
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 318     cggccgccgccgcccgcgccttct 341
               |||||||||||||| |||||||||
Sbjct: 3187669 cggccgccgccgccggcgccttct 3187646
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 319     ggccgccgccgcccgcgcct 338
               ||||||||||||||||||||
Sbjct: 4885545 ggccgccgccgcccgcgcct 4885564
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>gb|AC020915.6|AC020915 Homo sapiens chromosome 19 clone CTD-3138B18, complete sequence
          Length = 160852

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 327  ccgcccgcgccttctccctccaca 350
            |||||||||||| |||||||||||
Sbjct: 4665 ccgcccgcgcctcctccctccaca 4642
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 320      gccgccgccgcccgcgccttctcc 343
                ||||||||||||| ||||||||||
Sbjct: 18760800 gccgccgccgccctcgccttctcc 18760777
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 320      gccgccgccgcccgcgcctt 339
                ||||||||||||||||||||
Sbjct: 10536075 gccgccgccgcccgcgcctt 10536094
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 320      gccgccgccgcccgcgcctt 339
                ||||||||||||||||||||
Sbjct: 11632763 gccgccgccgcccgcgcctt 11632744



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 320      gccgccgccgcccgcgcctt 339
                ||||||||||||||||||||
Sbjct: 11632682 gccgccgccgcccgcgcctt 11632663
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 320      gccgccgccgcccgcgcctt 339
                ||||||||||||||||||||
Sbjct: 23412055 gccgccgccgcccgcgcctt 23412036



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 320      gccgccgccgcccgcgcctt 339
                ||||||||||||||||||||
Sbjct: 23411998 gccgccgccgcccgcgcctt 23411979
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 320      gccgccgccgcccgcgcctt 339
                ||||||||||||||||||||
Sbjct: 25942927 gccgccgccgcccgcgcctt 25942946



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 320      gccgccgccgcccgcgccttctcc 343
                ||||||||||||| ||||||||||
Sbjct: 19349614 gccgccgccgccctcgccttctcc 19349637



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 320     gccgccgccgcccgcgcctt 339
               ||||||||||||||||||||
Sbjct: 8222092 gccgccgccgcccgcgcctt 8222111



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 320     gccgccgccgcccgcgcctt 339
               ||||||||||||||||||||
Sbjct: 8222011 gccgccgccgcccgcgcctt 8222030
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 315      ctacggccgccgccgcccgc 334
                ||||||||||||||||||||
Sbjct: 11865559 ctacggccgccgccgcccgc 11865540
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>gb|AC137925.2| Oryza sativa chromosome 3 BAC OSJNBb0047D08 genomic sequence, complete
              sequence
          Length = 140507

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 320    gccgccgccgcccgcgccttctcc 343
              ||||||||||||| ||||||||||
Sbjct: 139734 gccgccgccgccctcgccttctcc 139757
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>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12,
              complete sequence
          Length = 195583

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    gccgccgccgcccgcgcctt 339
              ||||||||||||||||||||
Sbjct: 155687 gccgccgccgcccgcgcctt 155706



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    gccgccgccgcccgcgcctt 339
              ||||||||||||||||||||
Sbjct: 155606 gccgccgccgcccgcgcctt 155625
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>dbj|AP005768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBa0039C01
          Length = 151054

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  gccgccgccgcccgcgcctt 339
            ||||||||||||||||||||
Sbjct: 1471 gccgccgccgcccgcgcctt 1452



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  gccgccgccgcccgcgcctt 339
            ||||||||||||||||||||
Sbjct: 1390 gccgccgccgcccgcgcctt 1371
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>dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0467G09
          Length = 158204

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   gccgccgccgcccgcgcctt 339
             ||||||||||||||||||||
Sbjct: 93034 gccgccgccgcccgcgcctt 93015



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   gccgccgccgcccgcgcctt 339
             ||||||||||||||||||||
Sbjct: 92953 gccgccgccgcccgcgcctt 92934
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>dbj|AP003612.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0457B11
          Length = 144015

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    gccgccgccgcccgcgcctt 339
              ||||||||||||||||||||
Sbjct: 131028 gccgccgccgcccgcgcctt 131009



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    gccgccgccgcccgcgcctt 339
              ||||||||||||||||||||
Sbjct: 130971 gccgccgccgcccgcgcctt 130952
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>dbj|AP005678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1116_F08
          Length = 133805

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    gccgccgccgcccgcgcctt 339
              ||||||||||||||||||||
Sbjct: 103680 gccgccgccgcccgcgcctt 103699
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>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0448B03
          Length = 147748

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    gccgccgccgcccgcgcctt 339
              ||||||||||||||||||||
Sbjct: 136454 gccgccgccgcccgcgcctt 136473
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>dbj|AP002836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0512G09
          Length = 146921

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 320  gccgccgccgcccgcgccttctcc 343
            ||||||||| ||||||||||||||
Sbjct: 9576 gccgccgcctcccgcgccttctcc 9553
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>dbj|AP002816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0695A04
          Length = 158133

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 320   gccgccgccgcccgcgccttctcc 343
             ||||||||| ||||||||||||||
Sbjct: 56547 gccgccgcctcccgcgccttctcc 56524
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 256     gccggcgagggcgacctgcc 275
               ||||||||||||||||||||
Sbjct: 4581085 gccggcgagggcgacctgcc 4581104
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 318     cggccgccgccgcccgcgcc 337
               ||||||||||||||||||||
Sbjct: 3691083 cggccgccgccgcccgcgcc 3691064
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>dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0486H12
          Length = 179085

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   gccgccgccgcccgcgcctt 339
             ||||||||||||||||||||
Sbjct: 71610 gccgccgccgcccgcgcctt 71591



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   gccgccgccgcccgcgcctt 339
             ||||||||||||||||||||
Sbjct: 71553 gccgccgccgcccgcgcctt 71534
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>dbj|AP005255.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0087F05
          Length = 143908

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   gccgccgccgcccgcgcctt 339
             ||||||||||||||||||||
Sbjct: 56570 gccgccgccgcccgcgcctt 56551



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   gccgccgccgcccgcgcctt 339
             ||||||||||||||||||||
Sbjct: 56489 gccgccgccgcccgcgcctt 56470
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>dbj|AP005009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0572A04
          Length = 132018

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   ctacggccgccgccgcccgc 334
             ||||||||||||||||||||
Sbjct: 63332 ctacggccgccgccgcccgc 63313
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>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting
           chlorophyll-a/b protein of photosystem I, complete cds
          Length = 1886

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 263 agggcgacctgcccggtgac 282
           ||||||||||||||||||||
Sbjct: 385 agggcgacctgcccggtgac 404
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>dbj|AK111383.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-B09, full
           insert sequence
          Length = 544

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 gccgccgccgcccgcgcctt 339
           ||||||||||||||||||||
Sbjct: 122 gccgccgccgcccgcgcctt 103



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 gccgccgccgcccgcgcctt 339
           ||||||||||||||||||||
Sbjct: 65  gccgccgccgcccgcgcctt 46
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>dbj|AK073375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028M15, full
           insert sequence
          Length = 1950

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 gccgccgccgcccgcgcctt 339
           ||||||||||||||||||||
Sbjct: 153 gccgccgccgcccgcgcctt 134



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 gccgccgccgcccgcgcctt 339
           ||||||||||||||||||||
Sbjct: 96  gccgccgccgcccgcgcctt 77
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    ggccgccgccgcccgcgcct 338
              ||||||||||||||||||||
Sbjct: 705125 ggccgccgccgcccgcgcct 705144
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>dbj|AK064094.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-E12, full
           insert sequence
          Length = 1302

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 320 gccgccgccgcccgcgccttctcc 343
           ||||||||| ||||||||||||||
Sbjct: 176 gccgccgcctcccgcgccttctcc 153
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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   cggccgccgccgcccgcgcc 337
             ||||||||||||||||||||
Sbjct: 63363 cggccgccgccgcccgcgcc 63344
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>emb|AL732497.15| Mouse DNA sequence from clone RP23-130H14 on chromosome 4, complete
              sequence
          Length = 208663

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    cggccgccgccgcccgcgcc 337
              ||||||||||||||||||||
Sbjct: 102202 cggccgccgccgcccgcgcc 102221
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 320      gccgccgccgcccgcgccttctcc 343
                ||||||||||||| ||||||||||
Sbjct: 18771654 gccgccgccgccctcgccttctcc 18771631
to top
>emb|BX284657.1| Human DNA sequence from clone RP1-100G10 on chromosome
            22q13.31-13.33, complete sequence
          Length = 7390

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 336  ccttctccctccacagctctgcct 359
            ||||||||||||||| ||||||||
Sbjct: 5775 ccttctccctccacaactctgcct 5798
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>emb|AL683854.20| Mouse DNA sequence from clone RP23-237K13 on chromosome 4, complete
              sequence
          Length = 234724

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 67     atctttcccaggtagcagctacaa 90
              ||||||||||||||| ||||||||
Sbjct: 160144 atctttcccaggtagaagctacaa 160121
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>emb|AL808102.8| Mouse DNA sequence from clone RP23-192O6 on chromosome 2, complete
             sequence
          Length = 178743

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   cggccgccgccgcccgcgcc 337
             ||||||||||||||||||||
Sbjct: 46253 cggccgccgccgcccgcgcc 46272


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,344,379
Number of Sequences: 3902068
Number of extensions: 2344379
Number of successful extensions: 65481
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63091
Number of HSP's gapped (non-prelim): 2390
length of query: 389
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 367
effective length of database: 17,147,199,772
effective search space: 6293022316324
effective search space used: 6293022316324
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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