| Clone Name | rbaal3b11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|BX548025.9| Zebrafish DNA sequence from clone DKEY-237J22 in linkage group 9, complete sequence Length = 134425 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 496 ctatttctgtttgcagaatgg 516 ||||||||||||||||||||| Sbjct: 81823 ctatttctgtttgcagaatgg 81803
>emb|BX247876.6| Zebrafish DNA sequence from clone CH211-271B14 in linkage group 5, complete sequence Length = 176246 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 tagtatgttgattgactgctgtgat 285 |||||||||||||||||||| |||| Sbjct: 176113 tagtatgttgattgactgctttgat 176089
>gb|AC091809.4| Homo sapiens chromosome X clone XXbac-11940 map p11.4, complete sequence Length = 218733 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 agataatttgatttattgct 151 |||||||||||||||||||| Sbjct: 19526 agataatttgatttattgct 19507
>gb|AC110559.11| Mus musculus chromosome 7, clone RP23-253E12, complete sequence Length = 192856 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ataatttgatttattgctag 153 |||||||||||||||||||| Sbjct: 143351 ataatttgatttattgctag 143332
>gb|AY190956.1| Drosophila virilis clone DVIF01_06_H02 (D1438) genomic sequence Length = 46427 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 tatttctgtttgcagaatgg 516 |||||||||||||||||||| Sbjct: 40339 tatttctgtttgcagaatgg 40320
>emb|AL591802.28| Human DNA sequence from clone RP11-330L22 on chromosome X, complete sequence Length = 56935 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 agataatttgatttattgct 151 |||||||||||||||||||| Sbjct: 5485 agataatttgatttattgct 5466
>emb|AL450309.14| Human DNA sequence from clone RP11-478H16 on chromosome 1 Contains the 5' end of the ERO1LB gene for ERO1-like beta (S. cerevisiae), an FK506 binding protein 3, 25kDa (FKBP3) pseudogene, the 5' UTR of a variant of the EDARADD gene for EDAR-associated death domain and three CpG islands, complete sequence Length = 166647 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tattctgagctaagacaaga 20 |||||||||||||||||||| Sbjct: 162337 tattctgagctaagacaaga 162318
>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete sequence Length = 64582 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 taatttgatttattgctagc 154 |||||||||||||||||||| Sbjct: 6728 taatttgatttattgctagc 6709
>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5 Length = 348034 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gaagataatttgatttattg 149 |||||||||||||||||||| Sbjct: 317550 gaagataatttgatttattg 317531
>emb|BX908782.7| Zebrafish DNA sequence from clone DKEY-6E4 in linkage group 2, complete sequence Length = 196309 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 tacttatttaccaattacca 122 |||||||||||||||||||| Sbjct: 47418 tacttatttaccaattacca 47437
>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete sequence Length = 143961 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 taatttgatttattgctagc 154 |||||||||||||||||||| Sbjct: 143433 taatttgatttattgctagc 143414
>gb|AC158315.9| Mus musculus chromosome 7, clone RP23-146D22, complete sequence Length = 212973 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ataatttgatttattgctag 153 |||||||||||||||||||| Sbjct: 125777 ataatttgatttattgctag 125796
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 taatttgatttattgctagc 154 |||||||||||||||||||| Sbjct: 22491010 taatttgatttattgctagc 22490991
>gb|AC012512.7| Homo sapiens BAC clone RP11-561O7 from 2, complete sequence Length = 179460 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tctgcccttgacacctcaaa 61 |||||||||||||||||||| Sbjct: 131157 tctgcccttgacacctcaaa 131176
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 tttctcctatttcggcactcacag 451 |||||| ||||||||||||||||| Sbjct: 1800158 tttctcttatttcggcactcacag 1800181
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 taatttgatttattgctagc 154 |||||||||||||||||||| Sbjct: 22503478 taatttgatttattgctagc 22503459 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,086,670 Number of Sequences: 3902068 Number of extensions: 4086670 Number of successful extensions: 71593 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71531 Number of HSP's gapped (non-prelim): 62 length of query: 524 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 501 effective length of database: 17,143,297,704 effective search space: 8588792149704 effective search space used: 8588792149704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)