| Clone Name | rbaal2m11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469901.1| Oryza sativa (japonica cultivar-group), mRNA Length = 912 Score = 309 bits (156), Expect = 6e-81 Identities = 221/243 (90%) Strand = Plus / Minus Query: 315 ttacattggcctctggcaagcagagaacagctgccagctgatgaaagccataaccagcga 374 ||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 912 ttacattggtctctgacaagctgagaacagctgccagctgatgaaagccatgaccagtga 853 Query: 375 ggagaagagctcaaagccgaccaccttgggagtctgccactccaacgatctccgcaagta 434 |||||| ||||| ||||| |||||||| |||||||||||||| || ||||||| |||||| Sbjct: 852 ggagaacagctcgaagccaaccacctttggagtctgccactctaatgatctcctcaagta 793 Query: 435 gctggtgatagatggcattgttgccagaagcagagcacatgcataaattattggaattaa 494 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 792 actggtgatagatggcattgttgccagaagcaaagcacatgcataaattattggcaccaa 733 Query: 495 agtcctaggtttgttcttcctcagccacatcaaggatcctaatgcancaagggagagggt 554 ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||| || || Sbjct: 732 agtcctaggtttgtttttcctcagccacatcaaggatcctaaagcagcaagggacagcgt 673 Query: 555 cat 557 ||| Sbjct: 672 cat 670
>dbj|AK106079.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A06, full insert sequence Length = 1122 Score = 309 bits (156), Expect = 6e-81 Identities = 221/243 (90%) Strand = Plus / Minus Query: 315 ttacattggcctctggcaagcagagaacagctgccagctgatgaaagccataaccagcga 374 ||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 790 ttacattggtctctgacaagctgagaacagctgccagctgatgaaagccatgaccagtga 731 Query: 375 ggagaagagctcaaagccgaccaccttgggagtctgccactccaacgatctccgcaagta 434 |||||| ||||| ||||| |||||||| |||||||||||||| || ||||||| |||||| Sbjct: 730 ggagaacagctcgaagccaaccacctttggagtctgccactctaatgatctcctcaagta 671 Query: 435 gctggtgatagatggcattgttgccagaagcagagcacatgcataaattattggaattaa 494 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 670 actggtgatagatggcattgttgccagaagcaaagcacatgcataaattattggcaccaa 611 Query: 495 agtcctaggtttgttcttcctcagccacatcaaggatcctaatgcancaagggagagggt 554 ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||| || || Sbjct: 610 agtcctaggtttgtttttcctcagccacatcaaggatcctaaagcagcaagggacagcgt 551 Query: 555 cat 557 ||| Sbjct: 550 cat 548
>dbj|AK104743.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E03, full insert sequence Length = 1122 Score = 309 bits (156), Expect = 6e-81 Identities = 221/243 (90%) Strand = Plus / Minus Query: 315 ttacattggcctctggcaagcagagaacagctgccagctgatgaaagccataaccagcga 374 ||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 790 ttacattggtctctgacaagctgagaacagctgccagctgatgaaagccatgaccagtga 731 Query: 375 ggagaagagctcaaagccgaccaccttgggagtctgccactccaacgatctccgcaagta 434 |||||| ||||| ||||| |||||||| |||||||||||||| || ||||||| |||||| Sbjct: 730 ggagaacagctcgaagccaaccacctttggagtctgccactctaatgatctcctcaagta 671 Query: 435 gctggtgatagatggcattgttgccagaagcagagcacatgcataaattattggaattaa 494 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 670 actggtgatagatggcattgttgccagaagcaaagcacatgcataaattattggcaccaa 611 Query: 495 agtcctaggtttgttcttcctcagccacatcaaggatcctaatgcancaagggagagggt 554 ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||| || || Sbjct: 610 agtcctaggtttgtttttcctcagccacatcaaggatcctaaagcagcaagggacagcgt 551 Query: 555 cat 557 ||| Sbjct: 550 cat 548
>gb|BT018560.1| Zea mays clone EL01N0440E12.d mRNA sequence Length = 1543 Score = 307 bits (155), Expect = 2e-80 Identities = 223/246 (90%) Strand = Plus / Minus Query: 315 ttacattggcctctggcaagcagagaacagctgccagctgatgaaagccataaccagcga 374 |||||| || ||||| ||||| |||||||||||||||||||||||||||||||| || || Sbjct: 1206 ttacatcggtctctgacaagccgagaacagctgccagctgatgaaagccataacaaggga 1147 Query: 375 ggagaagagctcaaagccgaccaccttgggagtctgccactccaacgatctccgcaagta 434 |||||||||||| ||||| |||||||| || |||||||||||||| || |||| |||||| Sbjct: 1146 ggagaagagctcgaagccaaccacctttggtgtctgccactccaatgacctcctcaagta 1087 Query: 435 gctggtgatagatggcattgttgccagaagcagagcacatgcataaattattggaattaa 494 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct: 1086 gctggtgatagatggcattgttgccaagagcagagcacatgcataaattattggaaccga 1027 Query: 495 agtcctaggtttgttcttcctcagccacatcaaggatcctaatgcancaagggagagggt 554 ||||||||| ||||||||||| |||||||||||||| || |||||| ||||||||||||| Sbjct: 1026 agtcctaggcttgttcttcctaagccacatcaaggaccccaatgcagcaagggagagggt 967 Query: 555 catcac 560 |||||| Sbjct: 966 catcac 961
>dbj|AK070596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056A03, full insert sequence Length = 1123 Score = 301 bits (152), Expect = 2e-78 Identities = 220/243 (90%) Strand = Plus / Minus Query: 315 ttacattggcctctggcaagcagagaacagctgccagctgatgaaagccataaccagcga 374 ||||||||| ||| | ||||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 795 ttacattggtctccgacaagctgagaacagctgccagctgatgaaagccatgaccagtga 736 Query: 375 ggagaagagctcaaagccgaccaccttgggagtctgccactccaacgatctccgcaagta 434 |||||| ||||| ||||| |||||||| |||||||||||||| || ||||||| |||||| Sbjct: 735 ggagaacagctcgaagccaaccacctttggagtctgccactctaatgatctcctcaagta 676 Query: 435 gctggtgatagatggcattgttgccagaagcagagcacatgcataaattattggaattaa 494 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 675 actggtgatagatggcattgttgccagaagcaaagcacatgcataaattattggcaccaa 616 Query: 495 agtcctaggtttgttcttcctcagccacatcaaggatcctaatgcancaagggagagggt 554 ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||| || || Sbjct: 615 agtcctaggtttgtttttcctcagccacatcaaggatcctaaagcagcaagggacagcgt 556 Query: 555 cat 557 ||| Sbjct: 555 cat 553
>gb|AY105781.1| Zea mays PCO078499 mRNA sequence Length = 1022 Score = 301 bits (152), Expect = 2e-78 Identities = 214/235 (91%) Strand = Plus / Minus Query: 326 tctggcaagcagagaacagctgccagctgatgaaagccataaccagcgaggagaagagct 385 |||| ||||| |||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 821 tctgacaagccgagaacagctgccagctgatgaaagccataacaagggaggagaagagct 762 Query: 386 caaagccgaccaccttgggagtctgccactccaacgatctccgcaagtagctggtgatag 445 | ||||| |||||||| || |||||||||||||| || |||| ||||||||||||||||| Sbjct: 761 cgaagccaaccacctttggtgtctgccactccaatgacctcctcaagtagctggtgatag 702 Query: 446 atggcattgttgccagaagcagagcacatgcataaattattggaattaaagtcctaggtt 505 ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| | Sbjct: 701 atggcattgttgccaagagcagagcacatgcataaattattggaaccaaagtcctaggct 642 Query: 506 tgttcttcctcagccacatcaaggatcctaatgcancaagggagagggtcatcac 560 |||| ||||| |||||||||||||| || |||||| ||||||||||||||||||| Sbjct: 641 tgtttttcctaagccacatcaaggaccccaatgcagcaagggagagggtcatcac 587
>ref|XM_469902.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2431 Score = 194 bits (98), Expect = 3e-46 Identities = 139/153 (90%) Strand = Plus / Minus Query: 436 ctggtgatagatggcattgttgccagaagcagagcacatgcataaattattggaattaaa 495 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| Sbjct: 1576 ctggtgatagatggcattgttgccagaagcaaagcacatgcataaattattggcaccaaa 1517 Query: 496 gtcctaggtttgttcttcctcagccacatcaaggatcctaatgcancaagggagagggtc 555 |||||||||||||| |||||||||||||||||||||||||| ||| ||||||| || ||| Sbjct: 1516 gtcctaggtttgtttttcctcagccacatcaaggatcctaaagcagcaagggacagcgtc 1457 Query: 556 atcacctgcagaagtacaaaagtaagtcttctg 588 || |||||||||| | ||||||||| |||||| Sbjct: 1456 ataacctgcagaaacataaaagtaagccttctg 1424 Score = 143 bits (72), Expect = 8e-31 Identities = 108/120 (90%) Strand = Plus / Minus Query: 315 ttacattggcctctggcaagcagagaacagctgccagctgatgaaagccataaccagcga 374 ||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 2421 ttacattggtctctgacaagctgagaacagctgccagctgatgaaagccatgaccagtga 2362 Query: 375 ggagaagagctcaaagccgaccaccttgggagtctgccactccaacgatctccgcaagta 434 |||||| ||||| ||||| |||||||| |||||||||||||| || ||||||| |||||| Sbjct: 2361 ggagaacagctcgaagccaaccacctttggagtctgccactctaatgatctcctcaagta 2302
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 194 bits (98), Expect = 3e-46 Identities = 139/153 (90%) Strand = Plus / Plus Query: 436 ctggtgatagatggcattgttgccagaagcagagcacatgcataaattattggaattaaa 495 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| Sbjct: 31423255 ctggtgatagatggcattgttgccagaagcaaagcacatgcataaattattggcaccaaa 31423314 Query: 496 gtcctaggtttgttcttcctcagccacatcaaggatcctaatgcancaagggagagggtc 555 |||||||||||||| |||||||||||||||||||||||||| ||| ||||||| || ||| Sbjct: 31423315 gtcctaggtttgtttttcctcagccacatcaaggatcctaaagcagcaagggacagcgtc 31423374 Query: 556 atcacctgcagaagtacaaaagtaagtcttctg 588 || |||||||||| | ||||||||| |||||| Sbjct: 31423375 ataacctgcagaaacataaaagtaagccttctg 31423407 Score = 143 bits (72), Expect = 8e-31 Identities = 108/120 (90%) Strand = Plus / Plus Query: 315 ttacattggcctctggcaagcagagaacagctgccagctgatgaaagccataaccagcga 374 ||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 31422410 ttacattggtctctgacaagctgagaacagctgccagctgatgaaagccatgaccagtga 31422469 Query: 375 ggagaagagctcaaagccgaccaccttgggagtctgccactccaacgatctccgcaagta 434 |||||| ||||| ||||| |||||||| |||||||||||||| || ||||||| |||||| Sbjct: 31422470 ggagaacagctcgaagccaaccacctttggagtctgccactctaatgatctcctcaagta 31422529
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 194 bits (98), Expect = 3e-46 Identities = 139/153 (90%) Strand = Plus / Minus Query: 436 ctggtgatagatggcattgttgccagaagcagagcacatgcataaattattggaattaaa 495 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| Sbjct: 72545 ctggtgatagatggcattgttgccagaagcaaagcacatgcataaattattggcaccaaa 72486 Query: 496 gtcctaggtttgttcttcctcagccacatcaaggatcctaatgcancaagggagagggtc 555 |||||||||||||| |||||||||||||||||||||||||| ||| ||||||| || ||| Sbjct: 72485 gtcctaggtttgtttttcctcagccacatcaaggatcctaaagcagcaagggacagcgtc 72426 Query: 556 atcacctgcagaagtacaaaagtaagtcttctg 588 || |||||||||| | ||||||||| |||||| Sbjct: 72425 ataacctgcagaaacataaaagtaagccttctg 72393 Score = 143 bits (72), Expect = 8e-31 Identities = 108/120 (90%) Strand = Plus / Minus Query: 315 ttacattggcctctggcaagcagagaacagctgccagctgatgaaagccataaccagcga 374 ||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 73390 ttacattggtctctgacaagctgagaacagctgccagctgatgaaagccatgaccagtga 73331 Query: 375 ggagaagagctcaaagccgaccaccttgggagtctgccactccaacgatctccgcaagta 434 |||||| ||||| ||||| |||||||| |||||||||||||| || ||||||| |||||| Sbjct: 73330 ggagaacagctcgaagccaaccacctttggagtctgccactctaatgatctcctcaagta 73271
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 194 bits (98), Expect = 3e-46 Identities = 139/153 (90%) Strand = Plus / Plus Query: 436 ctggtgatagatggcattgttgccagaagcagagcacatgcataaattattggaattaaa 495 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| Sbjct: 31513771 ctggtgatagatggcattgttgccagaagcaaagcacatgcataaattattggcaccaaa 31513830 Query: 496 gtcctaggtttgttcttcctcagccacatcaaggatcctaatgcancaagggagagggtc 555 |||||||||||||| |||||||||||||||||||||||||| ||| ||||||| || ||| Sbjct: 31513831 gtcctaggtttgtttttcctcagccacatcaaggatcctaaagcagcaagggacagcgtc 31513890 Query: 556 atcacctgcagaagtacaaaagtaagtcttctg 588 || |||||||||| | ||||||||| |||||| Sbjct: 31513891 ataacctgcagaaacataaaagtaagccttctg 31513923 Score = 143 bits (72), Expect = 8e-31 Identities = 108/120 (90%) Strand = Plus / Plus Query: 315 ttacattggcctctggcaagcagagaacagctgccagctgatgaaagccataaccagcga 374 ||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||| || Sbjct: 31512926 ttacattggtctctgacaagctgagaacagctgccagctgatgaaagccatgaccagtga 31512985 Query: 375 ggagaagagctcaaagccgaccaccttgggagtctgccactccaacgatctccgcaagta 434 |||||| ||||| ||||| |||||||| |||||||||||||| || ||||||| |||||| Sbjct: 31512986 ggagaacagctcgaagccaaccacctttggagtctgccactctaatgatctcctcaagta 31513045
>emb|CR354398.17| Zebrafish DNA sequence from clone CH211-142C14 in linkage group 7, complete sequence Length = 180088 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 98 cctacaagagcctctgttacagt 120 ||||||||||||||||||||||| Sbjct: 82536 cctacaagagcctctgttacagt 82514
>emb|AL645822.24| Zebrafish DNA sequence from clone RP71-1C22 in linkage group 20, complete sequence Length = 181112 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 285 tgtaaatctagcactgctttgttttg 310 ||||||||||||||||| |||||||| Sbjct: 114736 tgtaaatctagcactgcattgttttg 114711
>gb|AC010041.7| Drosophila melanogaster 3L BAC RP98-13D12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174712 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 476 cataaattattggaattaaagtccta 501 |||||||||||| ||||||||||||| Sbjct: 162653 cataaattattgaaattaaagtccta 162628
>gb|AC010019.5| Drosophila melanogaster 3L BAC RP98-6F6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 195148 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 476 cataaattattggaattaaagtccta 501 |||||||||||| ||||||||||||| Sbjct: 162419 cataaattattgaaattaaagtccta 162444
>emb|BX255947.6| Zebrafish DNA sequence from clone CH211-260D9 in linkage group 19, complete sequence Length = 147891 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 285 tgtaaatctagcactgctttgttttg 310 ||||||||||||||||| |||||||| Sbjct: 57120 tgtaaatctagcactgcattgttttg 57145
>gb|AE003555.3| Drosophila melanogaster chromosome 3L, section 30 of 83 of the complete sequence Length = 283781 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 476 cataaattattggaattaaagtccta 501 |||||||||||| ||||||||||||| Sbjct: 191671 cataaattattgaaattaaagtccta 191646
>gb|AC138204.7| Mus musculus chromosome 3, clone RP23-381G8, complete sequence Length = 173792 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 cctctggcaagcagagaacag 344 ||||||||||||||||||||| Sbjct: 124353 cctctggcaagcagagaacag 124373
>gb|AC125361.4| Mus musculus BAC clone RP23-93M7 from chromosome 12, complete sequence Length = 202234 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 aatctcctgtaaatctagcac 298 ||||||||||||||||||||| Sbjct: 152088 aatctcctgtaaatctagcac 152108
>gb|AC146815.1| Mus musculus BAC clone RP23-239A11 from chromosome 8, complete sequence Length = 203073 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 aaatagtgatggtagtggcaa 217 ||||||||||||||||||||| Sbjct: 62467 aaatagtgatggtagtggcaa 62447
>gb|AC155908.3| Mus musculus BAC clone RP23-209J19 from chromosome 9, complete sequence Length = 181952 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 atggcattgttgccagaagca 466 ||||||||||||||||||||| Sbjct: 78051 atggcattgttgccagaagca 78031
>emb|AL035416.7|HS782L23 Human DNA sequence from clone RP4-782L23 on chromosome 1p31.2-33 Contains the 3' end of a novel gene (FLJ10986), two novel genes, the 5' end of the HOOK1 gene for hook homolog 1 (Drosophila) and a CpG island, complete sequence Length = 123925 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 gcagagaacagctgccagctg 354 ||||||||||||||||||||| Sbjct: 105664 gcagagaacagctgccagctg 105684
>emb|BX957223.1| Methanococcus maripaludis S2 complete genome; segment 5/5 Length = 268122 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 315 ttacattggcctctggcaagcagag 339 |||||||||||||||| |||||||| Sbjct: 60662 ttacattggcctctggaaagcagag 60638
>gb|AC163282.3| Mus musculus BAC clone RP23-454I20 from chromosome 12, complete sequence Length = 202583 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 aatctcctgtaaatctagcac 298 ||||||||||||||||||||| Sbjct: 71541 aatctcctgtaaatctagcac 71561
>gb|AC100183.11| Mus musculus chromosome 3, clone RP23-54L16, complete sequence Length = 231917 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 cctctggcaagcagagaacag 344 ||||||||||||||||||||| Sbjct: 113942 cctctggcaagcagagaacag 113922
>gb|AC124231.17| Mus musculus chromosome 18, clone RP23-17N19, complete sequence Length = 219005 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 589 aaatcaggataaccaaaacaa 609 ||||||||||||||||||||| Sbjct: 59816 aaatcaggataaccaaaacaa 59796
>emb|CT010499.9| Mouse DNA sequence from clone RP23-211K24 on chromosome 9, complete sequence Length = 212470 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 atggcattgttgccagaagca 466 ||||||||||||||||||||| Sbjct: 203503 atggcattgttgccagaagca 203483
>ref|XM_516453.1| PREDICTED: Pan troglodytes glutaminyl-tRNA synthetase (LOC460363), mRNA Length = 5499 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 1202 accagcgaggagaggagctcaaag 1225
>ref|NM_001034468.1| Bos taurus similar to glutaminyl-tRNA synthetase (MGC128695), mRNA Length = 2455 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 1100 accagcgaggagaggagctcaaag 1123
>gb|BT016664.1| Zea mays clone Contig497 mRNA sequence Length = 1385 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 ctaattttgcccaagtacaacaag 258 ||||||||||||||||| |||||| Sbjct: 499 ctaattttgcccaagtagaacaag 476
>gb|AC182711.2| Populus trichocarpa clone Pop1-85E23, complete sequence Length = 95615 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 gacaaaaataaagtaaaatg 176 |||||||||||||||||||| Sbjct: 55096 gacaaaaataaagtaaaatg 55115
>gb|BT025487.1| Bos taurus glutaminyl-tRNA synthetase (QARS), mRNA, complete cds Length = 2422 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 1086 accagcgaggagaggagctcaaag 1109
>gb|BC001567.1| Homo sapiens glutaminyl-tRNA synthetase, mRNA (cDNA clone MGC:5483 IMAGE:3452261), complete cds Length = 2448 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 1079 accagcgaggagaggagctcaaag 1102
>gb|BC000394.2| Homo sapiens glutaminyl-tRNA synthetase, mRNA (cDNA clone MGC:8477 IMAGE:2821788), complete cds Length = 2452 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 1081 accagcgaggagaggagctcaaag 1104
>gb|BC029739.1| Homo sapiens glutaminyl-tRNA synthetase, mRNA (cDNA clone MGC:9787 IMAGE:3857444), complete cds Length = 2445 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 1082 accagcgaggagaggagctcaaag 1105
>gb|BC001772.1| Homo sapiens glutaminyl-tRNA synthetase, mRNA (cDNA clone IMAGE:3543728), partial cds Length = 1977 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 607 accagcgaggagaggagctcaaag 630
>gb|BC016634.1| Homo sapiens glutaminyl-tRNA synthetase, mRNA (cDNA clone IMAGE:3925061), partial cds Length = 2265 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 904 accagcgaggagaggagctcaaag 927
>gb|AC125196.4| Mus musculus BAC clone RP23-248M23 from chromosome 19, complete sequence Length = 196591 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 aaataaagtaaaatgttctg 181 |||||||||||||||||||| Sbjct: 95478 aaataaagtaaaatgttctg 95497
>gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome 3, complete sequence Length = 218807 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 ataaattattggaattaaag 496 |||||||||||||||||||| Sbjct: 158769 ataaattattggaattaaag 158788
>gb|AY226577.1| Mus musculus SET domain ERG-associated histone methyltransferase (Setdb1) gene, complete cds; alternatively spliced Length = 35880 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 accaccttgggagtctgcca 413 |||||||||||||||||||| Sbjct: 32049 accaccttgggagtctgcca 32030
>gb|AC182669.2| Populus trichocarpa clone Pop1-21I14, complete sequence Length = 149597 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gacaaaaataaagtaaaatg 176 |||||||||||||||||||| Sbjct: 129754 gacaaaaataaagtaaaatg 129735
>gb|AC182697.2| Populus trichocarpa clone Pop1-6M9, complete sequence Length = 58709 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gacaaaaataaagtaaaatg 176 |||||||||||||||||||| Sbjct: 58362 gacaaaaataaagtaaaatg 58343 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 gacaaaaataaagtaaaatg 176 |||||||||||||||||||| Sbjct: 51585 gacaaaaataaagtaaaatg 51604
>gb|AC131746.3| Mus musculus BAC clone RP23-62F20 from 3, complete sequence Length = 201620 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 ataaattattggaattaaag 496 |||||||||||||||||||| Sbjct: 149770 ataaattattggaattaaag 149751
>gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (CG10013), CG31217 (CG31217), and ultrabithorax (Ubx) genes, complete cds Length = 308092 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 caaaaataaagtaaaatgtt 178 |||||||||||||||||||| Sbjct: 192714 caaaaataaagtaaaatgtt 192695
>ref|NM_005051.1| Homo sapiens glutaminyl-tRNA synthetase (QARS), mRNA Length = 2437 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 1081 accagcgaggagaggagctcaaag 1104
>emb|AL596282.5| Human DNA sequence from clone RP11-249M7 on chromosome 13, complete sequence Length = 34777 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 cttcatatttttcacactat 638 |||||||||||||||||||| Sbjct: 4569 cttcatatttttcacactat 4588
>emb|AL031727.43|HS1056L3 Human DNA sequence from clone RP5-1056L3 on chromosome 1p35.1-36.13 Contains a novel gene, the gene for a novel protein (LOC374960), a ribosomal protein S14 (RPS14) pseudogene, the NBL1 gene for neuroblastoma suppression of tumorigenicity 1, the HTR6 gene for 5-hydroxytryptamine (serotonin) receptor 6, the 3' end of the gene for a novel protein (LOC255104) (FLJ45636) and two CpG islands, complete sequence Length = 163848 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 taagctgaatgtccttgctt 22 |||||||||||||||||||| Sbjct: 54766 taagctgaatgtccttgctt 54785
>gb|AC158153.3| Mus musculus chromosome 5, clone RP23-119B3, complete sequence Length = 196824 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 aacctgacttcatatttttc 631 |||||||||||||||||||| Sbjct: 107692 aacctgacttcatatttttc 107673
>emb|X76013.1|HSGLTSY H.sapiens QRSHs mRNA for glutaminyl-tRNA synthetase Length = 2437 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 1081 accagcgaggagaggagctcaaag 1104
>emb|AL590155.9| Zebrafish DNA sequence from clone RP71-79P20 in linkage group 23 Contains part of the putative novel DIRS-1 like retrotransposon DIRSDR2 (DIRS-1 Danio rerio 2), the 5' end of a novel gene and four CpG islands, complete sequence Length = 161731 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 agtaaaatgttctgcaactg 187 |||||||||||||||||||| Sbjct: 10388 agtaaaatgttctgcaactg 10369
>gb|BC105237.1| Bos taurus similar to glutaminyl-tRNA synthetase, mRNA (cDNA clone MGC:128695 IMAGE:7987467), complete cds Length = 2455 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 1100 accagcgaggagaggagctcaaag 1123
>dbj|AB192509.2| Sus scrofa genomic DNA, chromosome 7, BAC clone: L139G16, complete sequence Length = 157870 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 aaaataaagtaaaatgttct 180 |||||||||||||||||||| Sbjct: 111927 aaaataaagtaaaatgttct 111908
>dbj|AK056815.1| Homo sapiens cDNA FLJ32253 fis, clone PROST1000199, highly similar to GLUTAMINYL-TRNA SYNTHETASE (EC 6.1.1.18) Length = 2399 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 1051 accagcgaggagaggagctcaaag 1074
>gb|AC090605.7| Homo sapiens chromosome 15, clone RP11-261P5, complete sequence Length = 166870 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 ttcctcagccacatcaagga 530 |||||||||||||||||||| Sbjct: 76831 ttcctcagccacatcaagga 76850
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 aatcaggataaccaaaacaa 609 |||||||||||||||||||| Sbjct: 143066 aatcaggataaccaaaacaa 143047
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 acaaaaataaagtaaaatgt 177 |||||||||||||||||||| Sbjct: 130080 acaaaaataaagtaaaatgt 130099
>dbj|AK138982.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530044F20 product:unclassifiable, full insert sequence Length = 1837 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 tagcactgctttgttttgtt 312 |||||||||||||||||||| Sbjct: 1135 tagcactgctttgttttgtt 1154
>gb|AC102011.9| Mus musculus chromosome 5, clone RP24-536B19, complete sequence Length = 142377 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 aacctgacttcatatttttc 631 |||||||||||||||||||| Sbjct: 107390 aacctgacttcatatttttc 107409
>gb|AC135506.3| Homo sapiens chromosome 3 clone RP11-694I15, complete sequence Length = 174363 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 30579 accagcgaggagaggagctcaaag 30556
>gb|AF130067.1|AF130067 Homo sapiens clone FLB8204 PRO2195 mRNA, complete cds Length = 1977 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 600 accagcgaggagaggagctcaaag 623
>emb|BX664728.8| Zebrafish DNA sequence from clone CH211-108M10 in linkage group 7, complete sequence Length = 101324 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 acaaaaataaagtaaaatgt 177 |||||||||||||||||||| Sbjct: 79384 acaaaaataaagtaaaatgt 79403
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 acaaaaataaagtaaaatgt 177 |||||||||||||||||||| Sbjct: 21075626 acaaaaataaagtaaaatgt 21075607 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 aatcaggataaccaaaacaa 609 |||||||||||||||||||| Sbjct: 19233315 aatcaggataaccaaaacaa 19233334
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 tcatcacctgcagaagtaca 573 |||||||||||||||||||| Sbjct: 19658907 tcatcacctgcagaagtaca 19658888
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 aaatcaggataaccaaaaca 608 |||||||||||||||||||| Sbjct: 8316578 aaatcaggataaccaaaaca 8316597
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 caggataaccaaaacaagga 612 |||||||||||||||||||| Sbjct: 1298477 caggataaccaaaacaagga 1298496
>dbj|AK222510.1| Homo sapiens mRNA for glutaminyl-tRNA synthetase variant, clone: adSE00927 Length = 2459 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 accagcgaggagaagagctcaaag 390 ||||||||||||| |||||||||| Sbjct: 1100 accagcgaggagaggagctcaaag 1123
>gb|AC099778.2| Homo sapiens chromosome 3 clone RP11-708J19, complete sequence Length = 212775 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 agcagagaacagctgccagc 352 |||||||||||||||||||| Sbjct: 60895 agcagagaacagctgccagc 60914
>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 aaatcaggataaccaaaaca 608 |||||||||||||||||||| Sbjct: 93249 aaatcaggataaccaaaaca 93268
>emb|BX072535.4| Zebrafish DNA sequence from clone CH211-128E5, complete sequence Length = 189694 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 acaaaaataaagtaaaatgt 177 |||||||||||||||||||| Sbjct: 118457 acaaaaataaagtaaaatgt 118438
>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0042B03 Length = 167669 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 tcatcacctgcagaagtaca 573 |||||||||||||||||||| Sbjct: 134467 tcatcacctgcagaagtaca 134448
>emb|BX649446.6| Zebrafish DNA sequence from clone DKEY-247M22 in linkage group 4, complete sequence Length = 155024 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 571 acaaaagtaagtcttctgaaatca 594 |||||| ||||||||||||||||| Sbjct: 67066 acaaaaataagtcttctgaaatca 67043
>gb|AC092202.28| Mus musculus strain C57BL/6J chromosome 3 clone rp23-407b16, complete sequence Length = 196249 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 accaccttgggagtctgcca 413 |||||||||||||||||||| Sbjct: 123669 accaccttgggagtctgcca 123650
>gb|U49431.1|MGU49431 Meleagris gallopavo erythrocyte phospholipase C beta mRNA, complete cds Length = 4819 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 gttcttcctcagccacatca 526 |||||||||||||||||||| Sbjct: 1886 gttcttcctcagccacatca 1867
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 acaaaaataaagtaaaatgt 177 |||||||||||||||||||| Sbjct: 21086890 acaaaaataaagtaaaatgt 21086871 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 aatcaggataaccaaaacaa 609 |||||||||||||||||||| Sbjct: 19244591 aatcaggataaccaaaacaa 19244610
>gb|AC133083.3| Mus musculus BAC clone RP24-342G5 from 12, complete sequence Length = 191265 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tagcactgctttgttttgtt 312 |||||||||||||||||||| Sbjct: 64614 tagcactgctttgttttgtt 64595
>emb|AL928700.7| Mouse DNA sequence from clone RP23-388J20 on chromosome 2, complete sequence Length = 158364 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 599 aaccaaaacaaggaacctgacttc 622 ||||||||||||||| |||||||| Sbjct: 77709 aaccaaaacaaggaatctgacttc 77732
>dbj|AP003160.1| Homo sapiens genomic DNA, chromosome 1p36 clone:956M3, complete sequence Length = 130080 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 taagctgaatgtccttgctt 22 |||||||||||||||||||| Sbjct: 72325 taagctgaatgtccttgctt 72306 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,774,980 Number of Sequences: 3902068 Number of extensions: 7774980 Number of successful extensions: 149316 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 148812 Number of HSP's gapped (non-prelim): 504 length of query: 658 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 635 effective length of database: 17,143,297,704 effective search space: 10885994042040 effective search space used: 10885994042040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)