ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal3b03 |
|---|---|
| Clone Library Name | barley_pub |
>SUC3_ARATH (O80605) Sucrose transport protein SUC3 (Sucrose permease 3)| (Sucrose-proton symporter 3) (Sucrose transporter 2) Length = 594 Score = 122 bits (306), Expect = 1e-27 Identities = 63/142 (44%), Positives = 85/142 (59%) Frame = -1 Query: 682 LGPRVVWVSSNMLVCLSMAAICIISWWATQDLHGYIQHAITASKEIKAVSLALFAFLGIP 503 +G RVVW SN V MA +IS + D I++ + ++ + ++ +FA LG P Sbjct: 442 MGARVVWALSNFTVFACMAGTAVISLMSLSDDKNGIEYIMRGNETTRTAAVIVFALLGFP 501 Query: 502 LAILYSVPFAVTAQLAANKGGGQGLCTGVLNXXXXXXXXXXXXXAGPWDELFGKGNIPAF 323 LAI YSVPF+VTA++ A+ GGGQGL GVLN AGPWD+LFG GN+PAF Sbjct: 502 LAITYSVPFSVTAEVTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDQLFGGGNLPAF 561 Query: 322 GMASVFALIGGVVGIFLLPKIS 257 +ASV A GV+ + LP +S Sbjct: 562 VLASVAAFAAGVIALQRLPTLS 583
>SUT_SPIOL (Q03411) Sucrose transport protein (Sucrose permease)| (Sucrose-proton symporter) Length = 525 Score = 95.9 bits (237), Expect = 1e-19 Identities = 58/157 (36%), Positives = 82/157 (52%), Gaps = 4/157 (2%) Frame = -1 Query: 679 GPRVVWVSSNML--VCLSMAAICIISWWATQDLHGYIQHAITASKE--IKAVSLALFAFL 512 G + +W N++ VCL+M + S +D H + A+ +K +LA+FA L Sbjct: 369 GAKRLWGIVNIILAVCLAMTVLVTKSAEHFRDSHHIMGSAVPPPPPAGVKGGALAIFAVL 428 Query: 511 GIPLAILYSVPFAVTAQLAANKGGGQGLCTGVLNXXXXXXXXXXXXXAGPWDELFGKGNI 332 GIPLAI +S+PFA+ + +A+ G GQGL GVLN +GPWD +FG GN+ Sbjct: 429 GIPLAITFSIPFALASIFSASSGSGQGLSLGVLNLAIVVPQMFVSVTSGPWDAMFGGGNL 488 Query: 331 PAFGMASVFALIGGVVGIFLLPKISRRQFRAVSGGGH 221 PAF + +V A V+ LLP S GGH Sbjct: 489 PAFVVGAVAATASAVLSFTLLPSPPPEAKIGGSMGGH 525
>SUC4_ARATH (Q9FE59) Sucrose transport protein SUC4 (Sucrose permease 4)| (Sucrose-proton symporter 4) (Sucrose transporter 4) Length = 510 Score = 92.4 bits (228), Expect = 1e-18 Identities = 55/139 (39%), Positives = 74/139 (53%) Frame = -1 Query: 679 GPRVVWVSSNMLVCLSMAAICIISWWATQDLHGYIQHAITASKEIKAVSLALFAFLGIPL 500 G VW SN+L+ + + I S+ A+ GYI H + + A L +F LGIPL Sbjct: 365 GAGFVWGISNILMAICFLGMIITSFVASH--LGYIGHEQPPASIVFAAVL-IFTILGIPL 421 Query: 499 AILYSVPFAVTAQLAANKGGGQGLCTGVLNXXXXXXXXXXXXXAGPWDELFGKGNIPAFG 320 AI YSVP+A+ + + G GQGL GVLN +GPWD+LFG GN PA Sbjct: 422 AITYSVPYALISIRIESLGLGQGLSLGVLNLAIVIPQVIVSVGSGPWDQLFGGGNSPALA 481 Query: 319 MASVFALIGGVVGIFLLPK 263 + + IGG+V I LP+ Sbjct: 482 VGAATGFIGGIVAILALPR 500
>SUC1_ARATH (Q39232) Sucrose transport protein SUC1 (Sucrose permease 1)| (Sucrose-proton symporter 1) Length = 513 Score = 91.3 bits (225), Expect = 2e-18 Identities = 54/152 (35%), Positives = 82/152 (53%) Frame = -1 Query: 679 GPRVVWVSSNMLVCLSMAAICIISWWATQDLHGYIQHAITASKEIKAVSLALFAFLGIPL 500 G + +W N ++ +A +++ +A +D S +KA +L+LFA LGIPL Sbjct: 361 GAKRLWGIVNFILAAGLAMTVLVTKFA-EDHRKTAGDLAGPSASVKAGALSLFAVLGIPL 419 Query: 499 AILYSVPFAVTAQLAANKGGGQGLCTGVLNXXXXXXXXXXXXXAGPWDELFGKGNIPAFG 320 AI +S PFA+ + ++ G GQGL GVLN GP+D LFG GN+PAF Sbjct: 420 AITFSTPFALASIFSSCSGAGQGLSLGVLNLAIVIPQMIVSLGGGPFDALFGGGNLPAFI 479 Query: 319 MASVFALIGGVVGIFLLPKISRRQFRAVSGGG 224 +A++ A I GV+ + +LP +A + GG Sbjct: 480 VAAIAAAISGVLALTVLPSPPPDAPKATTMGG 511
>SUC2_ARATH (Q39231) Sucrose transport protein SUC2 (Sucrose permease 2)| (Sucrose-proton symporter 2) (Sucrose transporter 1) Length = 512 Score = 90.9 bits (224), Expect = 3e-18 Identities = 48/138 (34%), Positives = 73/138 (52%) Frame = -1 Query: 679 GPRVVWVSSNMLVCLSMAAICIISWWATQDLHGYIQHAITASKEIKAVSLALFAFLGIPL 500 G + +W N ++ + +A +++ A + + A +L LFA LGIP Sbjct: 359 GAKRLWGIVNFILAICLAMTVVVTKQAENHRRDHGGAKTGPPGNVTAGALTLFAILGIPQ 418 Query: 499 AILYSVPFAVTAQLAANKGGGQGLCTGVLNXXXXXXXXXXXXXAGPWDELFGKGNIPAFG 320 AI +S+PFA+ + + N G GQGL GVLN GP+DELFG GNIPAF Sbjct: 419 AITFSIPFALASIFSTNSGAGQGLSLGVLNLAIVVPQMVISVGGGPFDELFGGGNIPAFV 478 Query: 319 MASVFALIGGVVGIFLLP 266 + ++ A + GV+ + +LP Sbjct: 479 LGAIAAAVSGVLALTVLP 496
>SUC9_ARATH (Q9FG00) Sucrose transport protein SUC9 (Sucrose permease 9)| (Sucrose-proton symporter 9) Length = 491 Score = 87.4 bits (215), Expect = 4e-17 Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 1/140 (0%) Frame = -1 Query: 682 LGPRVVWVSSNMLVCLSMAAICIISWWATQDLHGYIQHAITA-SKEIKAVSLALFAFLGI 506 +G + +W + N+++ + +A +++ A + H I + + I+ +L+LFA LGI Sbjct: 354 IGAKRLWGAVNIILAVCLAMTVLVTKKAEE--HRKIAGRMALPTNAIRDGALSLFAILGI 411 Query: 505 PLAILYSVPFAVTAQLAANKGGGQGLCTGVLNXXXXXXXXXXXXXAGPWDELFGKGNIPA 326 PLAI +S+PFA+ + ++++ G GQGL GVLN GP D LFG GN+P Sbjct: 412 PLAITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLPG 471 Query: 325 FGMASVFALIGGVVGIFLLP 266 F + ++ ALI VV + +LP Sbjct: 472 FVVGAIAALISSVVALTVLP 491
>SUC5_ARATH (Q9C8X2) Sucrose transport protein SUC5 (Sucrose permease 5)| (Sucrose-proton symporter 5) Length = 512 Score = 86.3 bits (212), Expect = 8e-17 Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 1/139 (0%) Frame = -1 Query: 679 GPRVVWVSSNMLVCLSMAAICIISWWATQDLHGYIQHAITA-SKEIKAVSLALFAFLGIP 503 G + +W N ++ + +A +++ + + H I + S IKA +LF LGIP Sbjct: 360 GAKRLWGCVNFILAIGLAMTVLVT--KSAEHHREIAGPLAGPSSGIKAGVFSLFTVLGIP 417 Query: 502 LAILYSVPFAVTAQLAANKGGGQGLCTGVLNXXXXXXXXXXXXXAGPWDELFGKGNIPAF 323 LAI YS+PFA+ + + N G GQGL GVLN +GP D FG GN+P+F Sbjct: 418 LAITYSIPFALASIFSTNSGAGQGLSLGVLNIAICIPQMIVSFSSGPLDAQFGGGNLPSF 477 Query: 322 GMASVFALIGGVVGIFLLP 266 + ++ A + GV+ + +LP Sbjct: 478 VVGAIAAAVSGVLALTVLP 496
>SUC6_ARATH (Q6A329) Probable sucrose transport protein SUC6 (Sucrose permease| 6) (Sucrose-proton symporter 6) Length = 492 Score = 85.9 bits (211), Expect = 1e-16 Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 1/139 (0%) Frame = -1 Query: 679 GPRVVWVSSNMLVCLSMAAICIISWWATQDLHGYIQHAITASKE-IKAVSLALFAFLGIP 503 G + +W + N+++ + +A +++ A + H I + + I+A +L LFA LGIP Sbjct: 356 GAKRLWGAVNIILAVCLAMTVLVTKKAEE--HRRIAGPMALPTDGIRAGALTLFALLGIP 413 Query: 502 LAILYSVPFAVTAQLAANKGGGQGLCTGVLNXXXXXXXXXXXXXAGPWDELFGKGNIPAF 323 LAI +S+PFA+ + ++++ G GQGL GVLN GP D LFG GN+P F Sbjct: 414 LAITFSIPFALASIISSSSGAGQGLSLGVLNMTIVIPQMVVSFGVGPIDALFGGGNLPGF 473 Query: 322 GMASVFALIGGVVGIFLLP 266 + ++ A I VV +LP Sbjct: 474 VVGAIAAAISSVVAFSVLP 492
>SUC8_ARATH (Q9ZVK6) Sucrose transport protein SUC8 (Sucrose permease 8)| (Sucrose-proton symporter 8) Length = 492 Score = 85.5 bits (210), Expect = 1e-16 Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 1/139 (0%) Frame = -1 Query: 679 GPRVVWVSSNMLVCLSMAAICIISWWATQDLHGYIQHAITASKE-IKAVSLALFAFLGIP 503 G + +W + N+++ + +A +++ A + H I + + I+A +L LFA LGIP Sbjct: 356 GAKRLWGAVNIILAVCLAMTVLVTKKAEE--HRRIAGPMALPTDGIRAGALTLFALLGIP 413 Query: 502 LAILYSVPFAVTAQLAANKGGGQGLCTGVLNXXXXXXXXXXXXXAGPWDELFGKGNIPAF 323 LAI +S+PFA+ + ++++ G GQGL GVLN GP D LFG GN+P F Sbjct: 414 LAITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLPRF 473 Query: 322 GMASVFALIGGVVGIFLLP 266 + ++ A I VV +LP Sbjct: 474 VVGAIAAAISSVVAFTVLP 492
>SUC7_ARATH (Q67YF8) Probable sucrose transport protein SUC7 (Sucrose permease| 7) (Sucrose-proton symporter 7) Length = 491 Score = 82.4 bits (202), Expect = 1e-15 Identities = 46/139 (33%), Positives = 77/139 (55%), Gaps = 1/139 (0%) Frame = -1 Query: 679 GPRVVWVSSNMLVCLSMAAICIISWWATQDLHGYIQHAITASKE-IKAVSLALFAFLGIP 503 G + +W + N+++ + +A +++ A + H I + + I+A +L LFA LGIP Sbjct: 355 GAKRLWGAVNIILAVCLAMTVLVTKKAEE--HRRIAGPMALPTDGIRAGALTLFALLGIP 412 Query: 502 LAILYSVPFAVTAQLAANKGGGQGLCTGVLNXXXXXXXXXXXXXAGPWDELFGKGNIPAF 323 LAI +S+PFA+ + ++++ G GQ L GVLN GP D LFG GN+P F Sbjct: 413 LAITFSIPFALASIISSSSGAGQRLSLGVLNMAIVIPQMIVSFGVGPIDALFGDGNLPGF 472 Query: 322 GMASVFALIGGVVGIFLLP 266 + ++ A + +V +LP Sbjct: 473 VVGAIAAAVSSIVAFTVLP 491
>STAM1_HUMAN (Q92783) Signal transducing adapter molecule 1 (STAM-1)| Length = 539 Score = 35.8 bits (81), Expect(2) = 0.020 Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 6/108 (5%) Frame = +3 Query: 195 GLRHAQVSQ*PPP----LTARNWRLEILGSRNMPTTPPMSAKTDAMPNAGMLPLPNSSSH 362 G+ +QV PPP L A N ++ L S ++P S +P + LP+ + Sbjct: 397 GVSGSQVYAGPPPSGAYLVAGNAQMSHLQSYSLPPEQLSSLSQAVVPPSANPALPSQQTQ 456 Query: 363 GPAPTAMITC--GITMAMFSTPVHSPCPPPLFAASCAVTAKGTLYRMA 500 P M++ G T PV+SP P A + A TA TLY+ A Sbjct: 457 AAYPNTMVSSVQGNTYPS-QAPVYSPPPA---ATAAAATADVTLYQNA 500 Score = 21.6 bits (44), Expect(2) = 0.020 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +1 Query: 100 LYGVLRREPPSYDAYAKI 153 LY L E P Y YAK+ Sbjct: 369 LYTKLMNEDPMYSMYAKL 386
>GNDS_RAT (Q03386) Ral guanine nucleotide dissociation stimulator (RalGEF)| (RalGDS) Length = 895 Score = 36.2 bits (82), Expect = 0.095 Identities = 22/65 (33%), Positives = 33/65 (50%) Frame = +3 Query: 294 PMSAKTDAMPNAGMLPLPNSSSHGPAPTAMITCGITMAMFSTPVHSPCPPPLFAASCAVT 473 P + +A+ A +L L +S PAP ++T + A+ STPV P P P+ A+S V Sbjct: 241 PSEVEPEALSPAPVLSLKPASQLEPAPALLLTP--SRAVASTPVREPAPVPVLASSPVVA 298 Query: 474 AKGTL 488 L Sbjct: 299 PASEL 303
>GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E1) (Cellulase E1) (Endocellulase E1) Length = 562 Score = 34.3 bits (77), Expect = 0.36 Identities = 21/63 (33%), Positives = 26/63 (41%) Frame = +3 Query: 288 TPPMSAKTDAMPNAGMLPLPNSSSHGPAPTAMITCGITMAMFSTPVHSPCPPPLFAASCA 467 +P +S P+A P P P PTA T +T TP SP P P A+ Sbjct: 410 SPSVSPSPSPSPSASRTPTPT-----PTPTASPTPTLTPTATPTPTASPTPSPTAASGAR 464 Query: 468 VTA 476 TA Sbjct: 465 CTA 467
>HCN1_HUMAN (O60741) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (Brain cyclic nucleotide gated channel 1) (BCNG-1) Length = 890 Score = 33.1 bits (74), Expect = 0.80 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%) Frame = +3 Query: 252 RLEILGSRNMPTTPPMSAKTDAMPNAGMLPLPNSSSHGPAPTA--------MITCGITMA 407 ++ L S + TTP +T + P L +S+ H P+P+ + C T A Sbjct: 643 QMTTLNSTSSTTTPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSPCSYTTA 702 Query: 408 MFSTPVHSP 434 + S PV SP Sbjct: 703 VCSPPVQSP 711
>ULK2_HUMAN (Q8IYT8) Serine/threonine-protein kinase ULK2 (EC 2.7.11.1)| (Unc-51-like kinase 2) Length = 1036 Score = 32.7 bits (73), Expect = 1.0 Identities = 36/145 (24%), Positives = 55/145 (37%), Gaps = 34/145 (23%) Frame = +3 Query: 150 NLVIDASCDRPAGAIGLR------------------HAQVSQ*PPPLTARNW-RLEILGS 272 N+ D SCD P G G R H++ + P P RN+ R+E Sbjct: 359 NISSDHSCDMPMGTAGRRASNEFLVCGGQCQPTVSPHSETAPIPVPTQIRNYQRIE---- 414 Query: 273 RNMPTTPPMSAKTDAMPNAGMLPLPNSSSHG----------PAPTAMITCGITMAMFSTP 422 +N+ +T P + ++ N+S G PA TA T G ++ S+ Sbjct: 415 QNLTSTASSGTNVHGSPRSAVVRRSNTSPMGFLRPGSCSPVPADTAQ-TVGRRLSTGSSR 473 Query: 423 VHSPCP-----PPLFAASCAVTAKG 482 +SP P P F+ C +G Sbjct: 474 PYSPSPLVGTIPEQFSQCCCGHPQG 498
>DYNA_XENLA (Q6PCJ1) Dynactin-1| Length = 1232 Score = 32.3 bits (72), Expect = 1.4 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 8/73 (10%) Frame = +3 Query: 282 PTTPPMSA----KTDAM--PNAGMLPLPNSSSHGPAPTAMITCG-ITMAMFSTPVHSPCP 440 P TP +A K D M P + LP SSS + TA +CG I+ + STP +P Sbjct: 89 PETPEPTASKGLKKDVMETPKSSKLPTRPSSSAASSGTASASCGEISSSEPSTPAQTPLA 148 Query: 441 PPLF-AASCAVTA 476 P+ + S A+T+ Sbjct: 149 APIIPSPSSAITS 161
>MEGF9_HUMAN (Q9H1U4) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 22/85 (25%) Frame = +3 Query: 282 PTTPPMSAKTDAMPNAGMLPLPN--SSSHGPAPTAMITCGI-----------------TM 404 PTTPP + +T A P P S++ GPAPT + + Sbjct: 122 PTTPPAAERTSTTSQAPTRPAPTTLSTTTGPAPTTPVATTVPAPTTPRTPTPDLPSSSNS 181 Query: 405 AMFSTP--VHSP-CPPPLFAASCAV 470 ++ TP +P PPP + +C+V Sbjct: 182 SVLPTPPATEAPSSPPPEYVCNCSV 206
>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)| (Tracheobronchial mucin) (TBM) (Major airway glycoprotein) (Fragment) Length = 1233 Score = 31.2 bits (69), Expect = 3.1 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Frame = +3 Query: 279 MPTTPPMSAKTDAM---PNAGMLPLPNSSSHGPAPTAMITCGITMAMFSTPVHSPCPPPL 449 +PTT SA T + P P+P +S+ APT T T + S P +P P P Sbjct: 39 VPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTS-APTTSTTSASTASTTSGPGTTPSPVPT 97 Query: 450 FAASCAVTAKGT 485 + + A T T Sbjct: 98 TSTTSAPTTSTT 109 Score = 30.0 bits (66), Expect = 6.8 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Frame = +3 Query: 279 MPTTPPMSAKTDAMPNAGMLPLPNS--SSHGPAPTAMITCGITMAMFSTPVHSPCPPPLF 452 +PTT SA T + +A + +S P PT T T + S P +P P P Sbjct: 95 VPTTSTTSAPTTSTTSASTASTTSGPGTSLSPVPTTSTTSAPTTSTTSGPGTTPSPVPTT 154 Query: 453 AASCAVTAKGT 485 + + A T T Sbjct: 155 STTSAPTTSTT 165 Score = 30.0 bits (66), Expect = 6.8 Identities = 19/67 (28%), Positives = 28/67 (41%) Frame = +3 Query: 285 TTPPMSAKTDAMPNAGMLPLPNSSSHGPAPTAMITCGITMAMFSTPVHSPCPPPLFAASC 464 T P++ T + P M P ++ P PT T T + S P +P P P + + Sbjct: 12 TISPLTTSTTSAPITSM-PSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTS 70 Query: 465 AVTAKGT 485 A T T Sbjct: 71 APTTSTT 77
>HCN1_RABIT (Q9MZS1) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (rbHCN1) Length = 822 Score = 31.2 bits (69), Expect = 3.1 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 8/69 (11%) Frame = +3 Query: 252 RLEILGSRNMPTTPPMSAKTDAMPNAGMLPLPNSSSHGPAPTA--------MITCGITMA 407 ++ L S + TP +T + P L +S+ H P+P+ + C T A Sbjct: 579 QMTALNSTSSTATPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSPCSYTTA 638 Query: 408 MFSTPVHSP 434 + S PV SP Sbjct: 639 VCSPPVQSP 647
>GDF1_MOUSE (P20863) Embryonic growth/differentiation factor 1 precursor| (GDF-1) Length = 357 Score = 30.8 bits (68), Expect = 4.0 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +3 Query: 318 MPNAGMLPLPNSSSHGPAPTAMITCGITMAMFSTPVHSPCPPPLF 452 +P+ + P P +S GPA + G+ A S P H P PP ++ Sbjct: 18 LPSTTLAPAP--ASMGPAAALLQVLGLPEAPRSVPTHRPVPPVMW 60
>HCN1_RAT (Q9JKB0) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 Length = 910 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 8/69 (11%) Frame = +3 Query: 252 RLEILGSRNMPTTPPMSAKTDAMPNAGMLPLPNSSSHGPAPTA--------MITCGITMA 407 ++ L + TTP +T + P L +S+ H P+P+ + C T A Sbjct: 632 QMTALNCTSSTTTPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSPCSYTTA 691 Query: 408 MFSTPVHSP 434 + S P+ SP Sbjct: 692 VCSPPIQSP 700
>HCN1_MOUSE (O88704) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (Brain cyclic nucleotide gated channel 1) (BCNG-1) (Hyperpolarization-activated cation channel 2) (HAC-2) Length = 910 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 8/69 (11%) Frame = +3 Query: 252 RLEILGSRNMPTTPPMSAKTDAMPNAGMLPLPNSSSHGPAPTA--------MITCGITMA 407 ++ L + TTP +T + P L +S+ H P+P+ + C T A Sbjct: 632 QMTALNCTSSTTTPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSPCSYTTA 691 Query: 408 MFSTPVHSP 434 + S P+ SP Sbjct: 692 VCSPPIQSP 700
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 30.8 bits (68), Expect = 4.0 Identities = 24/84 (28%), Positives = 34/84 (40%) Frame = +3 Query: 225 PPPLTARNWRLEILGSRNMPTTPPMSAKTDAMPNAGMLPLPNSSSHGPAPTAMITCGITM 404 PPPL A + + ++ TP +PN +P PN +S PAP Sbjct: 353 PPPLPAA---MSSASTNSVKATPVPPTLAPPLPNTTSVP-PNKASSMPAP---------- 398 Query: 405 AMFSTPVHSPCPPPLFAASCAVTA 476 P P PP F+ S A++A Sbjct: 399 -----PPPPPPPPGAFSTSSALSA 417 Score = 30.8 bits (68), Expect = 4.0 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Frame = +3 Query: 204 HAQVSQ*PPPLTARNWRLEILGSRNMPTTPPMSAKTDAMPNAGMLPLPNSSSHGPAP--- 374 H SQ P P +A + + + P PP + ++PN P +S+ P P Sbjct: 302 HKSPSQPPLPSSAPP-----IPTSHAPPLPPTAPPPPSLPNVTSAPKKATSAPAPPPPPL 356 Query: 375 TAMITCGITMAMFSTPVHSPCPPPL 449 A ++ T ++ +TPV PPL Sbjct: 357 PAAMSSASTNSVKATPVPPTLAPPL 381
>PREG_NEUCR (Q06712) Nuc-1 negative regulatory protein preg| Length = 483 Score = 30.4 bits (67), Expect = 5.2 Identities = 19/54 (35%), Positives = 23/54 (42%) Frame = +3 Query: 228 PPLTARNWRLEILGSRNMPTTPPMSAKTDAMPNAGMLPLPNSSSHGPAPTAMIT 389 P L R+ L SR T P ++ T LP+ S HGPAP A T Sbjct: 47 PSLREAASRIPALSSRRQSATAPATSSTS-------LPISIQSRHGPAPVASHT 93
>TMPS9_HUMAN (Q7Z410) Transmembrane protease, serine 9 (EC 3.4.21.-)| (Polyserase-1) (Polyserase-I) (Polyserine protease 1) [Contains: Serase-1; Serase-2; Serase-3] Length = 1059 Score = 30.4 bits (67), Expect = 5.2 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Frame = +3 Query: 243 RNWRLEILGSRNMPTTPP----MSAKTDAMPNAGMLPLPNSSSHGPAPTA 380 + W LEI+ S+ +P +PP M A T AG L +P ++ P P A Sbjct: 728 KGWILEIMSSQPLPMSPPSTTRMLATTSPRTTAG-LTVPGATPSRPTPGA 776
>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) Length = 646 Score = 30.4 bits (67), Expect = 5.2 Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 11/124 (8%) Frame = +3 Query: 180 PAGAIGLRHAQVSQ*PPPLTARNWRLEILGSRNMPTTPPMSAKTDAMPNAGMLPLPNSSS 359 PA + + +V++ PPP ++P PP D P+ P P+ S Sbjct: 495 PAPPVPVSSTKVNKFPPPPKFPQSSFPPPPMDDLPPPPPPPEIADLPPDFLPPPPPSFVS 554 Query: 360 HG--------PAPTAMI---TCGITMAMFSTPVHSPCPPPLFAASCAVTAKGTLYRMARG 506 HG P P A + T A + P P PPP A G++ ++A Sbjct: 555 HGGESLPPPPPDPVASLPPPPPAFTSAGGAPPPPPPPPPPPAPAPAVNNPAGSVRKVAPP 614 Query: 507 IPRK 518 P++ Sbjct: 615 PPKR 618
>GFC1_HUMAN (P63117) HERV-F(c)1_Xq21.33 provirus ancestral Gag polyprotein (Gag| polyprotein) [Contains: Matrix protein; Capsid protein] Length = 469 Score = 30.4 bits (67), Expect = 5.2 Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 3/65 (4%) Frame = +3 Query: 270 SRNMPTTPPMSAKTDAM---PNAGMLPLPNSSSHGPAPTAMITCGITMAMFSTPVHSPCP 440 S P + P+S +A+ P LP P S GP PTA + TP SP Sbjct: 112 SNKEPDSSPLSEPPEALALPPLPAALPPPYPGSSGPTPTA-------PPLPPTPPSSPAN 164 Query: 441 PPLFA 455 PP A Sbjct: 165 PPASA 169
>ARFA_ARATH (Q8L7G0) Auxin response factor 1| Length = 665 Score = 30.0 bits (66), Expect = 6.8 Identities = 17/69 (24%), Positives = 29/69 (42%) Frame = +3 Query: 249 WRLEILGSRNMPTTPPMSAKTDAMPNAGMLPLPNSSSHGPAPTAMITCGITMAMFSTPVH 428 W LE L + + P++ P + + P LP P + GP ++ +P Sbjct: 350 WELEPLVANSTPSSQPQPPQRNKRPRPPGLPSPATGPSGPVTPD--------GVWKSPAD 401 Query: 429 SPCPPPLFA 455 +P PLF+ Sbjct: 402 TPSSVPLFS 410
>ATG1_CRYNE (Q5K8D3) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)| (Autophagy-related protein 1) Length = 988 Score = 29.6 bits (65), Expect = 8.9 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 2/102 (1%) Frame = +3 Query: 252 RLEILGSRNMPT--TPPMSAKTDAMPNAGMLPLPNSSSHGPAPTAMITCGITMAMFSTPV 425 RL SR PT + P DA P+ +P S S P PT+ G+T +P Sbjct: 418 RLSTPPSRPTPTRRSTPKYYVGDATPSEPTAIIPPSPSSAPTPTSAPDPGLTTQ--QSPT 475 Query: 426 HSPCPPPLFAASCAVTAKGTLYRMARGIPRKAKRARETALIS 551 P P+ A+ + + +G R+A E A I+ Sbjct: 476 SRANPRPIITAASSAQRR----MSGKGDGREASSVEEAAPIT 513
>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 29.6 bits (65), Expect = 8.9 Identities = 27/85 (31%), Positives = 31/85 (36%), Gaps = 3/85 (3%) Frame = +3 Query: 225 PPPLTARNWRLEILGSRNMPTTPPMSAKTDAMPNAGMLPLPNSSSHG---PAPTAMITCG 395 PPP AR R P PP A T A P P P+ G P P M Sbjct: 299 PPPPPARG--------RGAPPPPPSRAPTAAPPP----PPPSRPGVGAPPPPPNRMYPPP 346 Query: 396 ITMAMFSTPVHSPCPPPLFAASCAV 470 + S P P PPP + S +V Sbjct: 347 LPALPSSAPSGPPPPPPPLSVSGSV 371
>MNT_HUMAN (Q99583) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)| Length = 582 Score = 29.6 bits (65), Expect = 8.9 Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 1/94 (1%) Frame = +3 Query: 228 PPLTARNWRLEILGSRNMPTTPPMSAKTDAMPNAGMLPLPNSSSHGPA-PTAMITCGITM 404 PP + + E+L S T PP S +P P P+ H A P A + Sbjct: 352 PPKLSHRPQPELLKS----TLPPPSTTPAPLP-----PHPHPHPHSVALPPAHLPVQQQQ 402 Query: 405 AMFSTPVHSPCPPPLFAASCAVTAKGTLYRMARG 506 TP+ +P PPP A V A L A G Sbjct: 403 PQQKTPLPAPPPPPAAPAQTLVPAPAHLVATAGG 436
>BZR1_ARATH (Q8S307) BRASSINAZOLE-RESISTANT 1 protein (BIN2 SUBSTRATE 2| protein) Length = 336 Score = 29.6 bits (65), Expect = 8.9 Identities = 20/58 (34%), Positives = 28/58 (48%) Frame = +3 Query: 270 SRNMPTTPPMSAKTDAMPNAGMLPLPNSSSHGPAPTAMITCGITMAMFSTPVHSPCPP 443 S + P TPP+S+ T P PLPN S A +M +MA F+ P ++ P Sbjct: 171 SNSCPVTPPVSSPTSKNPK----PLPNWES--IAKQSMAIAKQSMASFNYPFYAVSAP 222 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,877,749 Number of Sequences: 219361 Number of extensions: 1641646 Number of successful extensions: 5432 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 5033 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5394 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
