ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3a21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478377.1| Oryza sativa (japonica cultivar-group), mRNA 517 e-143
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 517 e-143
3dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic D... 517 e-143
4dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic D... 517 e-143
5dbj|AK072104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 517 e-143
6dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 509 e-141
7dbj|AK064835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 509 e-141
8gb|AY108268.1| Zea mays PCO078526 mRNA sequence 502 e-139
9gb|J04219.1|CREATPS C.reinhardtii chloroplast ATP synthase gamma... 84 6e-13
10gb|M73493.1|CREATPC Chlamydomonas reinhardtii ATP synthase (CF1)... 84 6e-13
11gb|DQ122880.1| Chlamydomonas incerta chloroplast ATP synthase ga... 78 4e-11
12emb|X70650.1|OSATPASE O.sinensis mRNA for gamma subunit of plast... 70 9e-09
13gb|AY826836.1| Isochrysis galbana clone ISATPG1 chloroplast ATP ... 54 6e-04
14gb|AC087888.12| Homo sapiens 12 BAC RP11-228G3 (Roswell Park Can... 48 0.035
15gb|AC114785.5| Homo sapiens BAC clone RP11-607G14 from 2, comple... 44 0.54
16gb|U88181.1| Caenorhabditis elegans cosmid C55B6, complete sequence 42 2.1
17gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
18gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome ... 42 2.1
19gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosom... 42 2.1
20emb|AL158817.11| Human DNA sequence from clone RP3-429O6 on chro... 42 2.1
21gb|AY267622.1| Bigelowiella natans ATP synthase gamma subunit mR... 42 2.1
22emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluste... 42 2.1
23gb|AC068298.16| Homo sapiens 3 BAC RP11-496B10 (Roswell Park Can... 42 2.1
24gb|AC118139.3| Homo sapiens BAC clone RP11-461K12 from 4, comple... 42 2.1
25gb|AC107365.2| Danio rerio, clone -241I7, complete sequence 42 2.1
26gb|DQ337864.1| Uncultured bacterium clone Psedi_nirS-31 NirS (ni... 42 2.1
27gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 2.1
28dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
29gb|AF088219.1|AF088219 Homo sapiens CC chemokine gene cluster, c... 42 2.1
30emb|CR382300.12| Zebrafish DNA sequence from clone DKEY-25E11 in... 42 2.1
31gb|AC006572.2|AC006572 Homo sapiens, clone hRPK.60_A_1, complete... 42 2.1
32gb|AC004675.1|AC004675 Homo sapiens chromosome 17, clone hCIT.18... 42 2.1
33gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 8.4
34gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 8.4
35gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 8.4
36gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 8.4
37ref|XM_957789.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.4
38ref|XM_326132.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.4
39gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 8.4
40gb|AC122903.4| Mus musculus BAC clone RP23-44N5 from chromosome ... 40 8.4
41gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate h... 40 8.4
42emb|Z81119.1|CET10H4 Caenorhabditis elegans Cosmid T10H4, comple... 40 8.4
43gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, compl... 40 8.4
44gb|AC118351.14| Rattus norvegicus 1 BAC CH230-362O18 (Children's... 40 8.4
45emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chr... 40 8.4
46gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 8.4
47emb|BX053660.1|CNS09DKG Single read from an extremity of a full-... 40 8.4
48emb|BX053659.1|CNS09DKF Single read from an extremity of a full-... 40 8.4
49gb|AC154570.2| Mus musculus BAC clone RP23-385M5 from chromosome... 40 8.4
50gb|AC006454.4| Homo sapiens PAC clone RP5-852P6 from 7, complete... 40 8.4
51emb|BX927151.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 8.4
52emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.4
53emb|AL929280.6| Mouse DNA sequence from clone RP23-67M20 on chro... 40 8.4
54emb|AL663060.6| Mouse DNA sequence from clone RP23-239H6 on chro... 40 8.4
55gb|AC011193.3| Homo sapiens chromosome 17, clone RP11-521P1, com... 40 8.4
56gb|AC073761.4| Mus musculus chromosome 17 clone RP23-33K21, comp... 40 8.4
57gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cance... 40 8.4
58gb|AC092111.9| Homo sapiens 12 BAC RP11-266K4 (Roswell Park Canc... 40 8.4
59dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, ... 40 8.4
60gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequ... 40 8.4
61gb|DQ337883.1| Uncultured bacterium clone S1m_nirS-22 NirS (nirS... 40 8.4
62gb|DQ337869.1| Uncultured bacterium clone Psedi_nirS-41 NirS (ni... 40 8.4
63gb|DQ337840.1| Uncultured bacterium clone P1m_nirS-15 NirS (nirS... 40 8.4
64gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, co... 40 8.4
65gb|AC157870.3| Loxodonta africana clone VMRC15-210D1, complete s... 40 8.4
66dbj|AK051229.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 8.4
67gb|AC012336.9|AC012336 Homo sapiens chromosome 17, clone CTD-223... 40 8.4
68dbj|AK037782.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 8.4
69dbj|AK043901.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 8.4
70dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
71dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
72dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 8.4
73gb|AC105916.4| Homo sapiens BAC clone RP11-180A12 from 4, comple... 40 8.4
74emb|AL929073.19| Mouse DNA sequence from clone RP23-125D6 on chr... 40 8.4
75dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
76dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
77dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
78dbj|AK121910.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
79dbj|AK101846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
80gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 8.4
81gb|AC154142.24| Mus musculus chromosome 1, clone RP23-187M7, com... 40 8.4
82emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chrom... 40 8.4
83dbj|AB032374.1| Mus musculus gene for Tbr1, 5' flanking region 40 8.4
84dbj|AB015309.1| Acidovorax sp. TP4 gene for PHB depolymerase, co... 40 8.4 
>ref|XM_478377.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1469

 Score =  517 bits (261), Expect = e-143
 Identities = 385/425 (90%), Gaps = 1/425 (0%)
 Strand = Plus / Minus

                                                                        
Query: 195  agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254
            |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 1119 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 1060

                                                                        
Query: 255  cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314
            || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 1059 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 1000

                                                                        
Query: 315  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 999  atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 940

                                                                        
Query: 375  tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 939  tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 880

                                                                        
Query: 435  tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494
            || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| |||
Sbjct: 879  tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 820

                                                                        
Query: 495  ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554
            || ||||||||||||||||||  ||| |||||||||||||||||||| || || | ||||
Sbjct: 819  ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 760

                                                                        
Query: 555  tttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtc 614
             |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||
Sbjct: 759  -ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtc 701

                 
Query: 615  ggagc 619
            |||||
Sbjct: 700  ggagc 696



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 1    catttggcatctccgaactgaaatcttatgtatctcgc 38
            ||||||||||| | ||| ||||||||| ||||||||||
Sbjct: 1354 catttggcatcgctgaattgaaatcttgtgtatctcgc 1317
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  517 bits (261), Expect = e-143
 Identities = 385/425 (90%), Gaps = 1/425 (0%)
 Strand = Plus / Plus

                                                                            
Query: 195      agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254
                |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 19602762 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 19602821

                                                                            
Query: 255      cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314
                || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 19602822 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 19602881

                                                                            
Query: 315      atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374
                ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 19602882 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 19602941

                                                                            
Query: 375      tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434
                |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 19602942 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 19603001

                                                                            
Query: 435      tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494
                || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| |||
Sbjct: 19603002 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 19603061

                                                                            
Query: 495      ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554
                || ||||||||||||||||||  ||| |||||||||||||||||||| || || | ||||
Sbjct: 19603062 ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 19603121

                                                                            
Query: 555      tttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtc 614
                 |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||
Sbjct: 19603122 -ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtc 19603180

                     
Query: 615      ggagc 619
                |||||
Sbjct: 19603181 ggagc 19603185



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 1        catttggcatctccgaactgaaatcttatgtatctcgc 38
                ||||||||||| | ||| ||||||||| ||||||||||
Sbjct: 19602527 catttggcatcgctgaattgaaatcttgtgtatctcgc 19602564
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>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0580A11
          Length = 174673

 Score =  517 bits (261), Expect = e-143
 Identities = 385/425 (90%), Gaps = 1/425 (0%)
 Strand = Plus / Plus

                                                                          
Query: 195    agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254
              |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 146106 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 146165

                                                                          
Query: 255    cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314
              || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 146166 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 146225

                                                                          
Query: 315    atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374
              ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 146226 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 146285

                                                                          
Query: 375    tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434
              |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 146286 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 146345

                                                                          
Query: 435    tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494
              || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| |||
Sbjct: 146346 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 146405

                                                                          
Query: 495    ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554
              || ||||||||||||||||||  ||| |||||||||||||||||||| || || | ||||
Sbjct: 146406 ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 146465

                                                                          
Query: 555    tttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtc 614
               |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||
Sbjct: 146466 -ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtc 146524

                   
Query: 615    ggagc 619
              |||||
Sbjct: 146525 ggagc 146529



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 1      catttggcatctccgaactgaaatcttatgtatctcgc 38
              ||||||||||| | ||| ||||||||| ||||||||||
Sbjct: 145871 catttggcatcgctgaattgaaatcttgtgtatctcgc 145908
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>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041J06
          Length = 138157

 Score =  517 bits (261), Expect = e-143
 Identities = 385/425 (90%), Gaps = 1/425 (0%)
 Strand = Plus / Plus

                                                                         
Query: 195   agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254
             |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 41412 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 41471

                                                                         
Query: 255   cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314
             || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 41472 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 41531

                                                                         
Query: 315   atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374
             ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 41532 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 41591

                                                                         
Query: 375   tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 41592 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 41651

                                                                         
Query: 435   tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494
             || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| |||
Sbjct: 41652 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 41711

                                                                         
Query: 495   ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554
             || ||||||||||||||||||  ||| |||||||||||||||||||| || || | ||||
Sbjct: 41712 ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 41771

                                                                         
Query: 555   tttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtc 614
              |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||
Sbjct: 41772 -ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtc 41830

                  
Query: 615   ggagc 619
             |||||
Sbjct: 41831 ggagc 41835



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 1     catttggcatctccgaactgaaatcttatgtatctcgc 38
             ||||||||||| | ||| ||||||||| ||||||||||
Sbjct: 41177 catttggcatcgctgaattgaaatcttgtgtatctcgc 41214
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>dbj|AK072104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116B21, full
            insert sequence
          Length = 1470

 Score =  517 bits (261), Expect = e-143
 Identities = 385/425 (90%), Gaps = 1/425 (0%)
 Strand = Plus / Minus

                                                                        
Query: 195  agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254
            |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 1119 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 1060

                                                                        
Query: 255  cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314
            || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 1059 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 1000

                                                                        
Query: 315  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 999  atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 940

                                                                        
Query: 375  tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 939  tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 880

                                                                        
Query: 435  tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494
            || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| |||
Sbjct: 879  tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 820

                                                                        
Query: 495  ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554
            || ||||||||||||||||||  ||| |||||||||||||||||||| || || | ||||
Sbjct: 819  ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 760

                                                                        
Query: 555  tttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtc 614
             |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||
Sbjct: 759  -ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtc 701

                 
Query: 615  ggagc 619
            |||||
Sbjct: 700  ggagc 696



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 1    catttggcatctccgaactgaaatcttatgtatctcgc 38
            ||||||||||| | ||| ||||||||| ||||||||||
Sbjct: 1355 catttggcatcgctgaattgaaatcttgtgtatctcgc 1318
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>dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C11, full
            insert sequence
          Length = 2822

 Score =  509 bits (257), Expect = e-141
 Identities = 384/425 (90%), Gaps = 1/425 (0%)
 Strand = Plus / Minus

                                                                        
Query: 195  agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254
            |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 2584 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 2525

                                                                        
Query: 255  cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314
            || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 2524 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 2465

                                                                        
Query: 315  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 2464 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 2405

                                                                        
Query: 375  tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434
            |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 2404 tggctgttgaggtagagcgggaggagcgcgtcggggatctggacggggtcctgctcgaac 2345

                                                                        
Query: 435  tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494
            || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| |||
Sbjct: 2344 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 2285

                                                                        
Query: 495  ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554
            || ||||||||||||||||||  ||| |||||||||||||||||||| || || | ||||
Sbjct: 2284 ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 2225

                                                                        
Query: 555  tttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtc 614
             |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||
Sbjct: 2224 -ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtc 2166

                 
Query: 615  ggagc 619
            |||||
Sbjct: 2165 ggagc 2161



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 1    catttggcatctccgaactgaaatcttatgtatctcgc 38
            ||||||||||| | ||| ||||||||| ||||||||||
Sbjct: 2819 catttggcatcgctgaattgaaatcttgtgtatctcgc 2782
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>dbj|AK064835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F20, full
            insert sequence
          Length = 1482

 Score =  509 bits (257), Expect = e-141
 Identities = 384/425 (90%), Gaps = 1/425 (0%)
 Strand = Plus / Minus

                                                                        
Query: 195  agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254
            |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 1224 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 1165

                                                                        
Query: 255  cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314
            || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 1164 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 1105

                                                                        
Query: 315  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 1104 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 1045

                                                                        
Query: 375  tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1044 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 985

                                                                        
Query: 435  tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494
            || || ||||| |||||||||||| |||||||||| | |||||| ||| ||||||| |||
Sbjct: 984  tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgccccacggtcagc 925

                                                                        
Query: 495  ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554
            || ||||||||||||||||||  ||| |||||||||||||||||||| || || | ||||
Sbjct: 924  ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 865

                                                                        
Query: 555  tttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtc 614
             |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||
Sbjct: 864  -ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtc 806

                 
Query: 615  ggagc 619
            |||||
Sbjct: 805  ggagc 801



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 1    catttggcatctccgaactgaaatcttatgtatctcgc 38
            ||||||||||| | ||| ||||||||| ||||||||||
Sbjct: 1459 catttggcatcgctgaattgaaatcttgtgtatctcgc 1422
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>gb|AY108268.1| Zea mays PCO078526 mRNA sequence
          Length = 1437

 Score =  502 bits (253), Expect = e-139
 Identities = 383/425 (90%), Gaps = 1/425 (0%)
 Strand = Plus / Minus

                                                                        
Query: 195  agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254
            ||||||||||| || ||||||||||| |||||||| ||||||||||||||||||||  | 
Sbjct: 1168 agggcgtcggcaccggcgacgatctcgaggatctccccggtgatcttggcctggcgctgt 1109

                                                                        
Query: 255  cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314
            || |||||| | |||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 1108 cggttgtaggcgatggagaggttcttgcggagctcgatggcgttgtcggtggcgctgctc 1049

                                                                        
Query: 315  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374
            ||||||||||||| ||| ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1048 atggcgctcatccgggcggcgagctcgctggcgagcgactcctgcagggcacggaggatc 989

                                                                        
Query: 375  tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434
            ||||||||||||||||||||||| || ||||| |||||||| ||||||||||||||||||
Sbjct: 988  tggctgttgaggtagagcgggagcagcgcgtccaggatctgcacggggtcctgctcgaac 929

                                                                        
Query: 435  tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494
            || || |||||||||||||||||| |||||||||| | ||||||||||||||||||||||
Sbjct: 928  tgcaccacgggggagaagggctgcgtctcgatcttcaccttctcgcgctccacggtgagc 869

                                                                        
Query: 495  ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554
            || || ||||||||||||||   |||||||||||||||||||||||| || |||| ||||
Sbjct: 868  ttcccctccttggtggtgaggcggaagagctcgtcctcggtggcgtccacgcagacgccg 809

                                                                        
Query: 555  tttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtc 614
             ||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||
Sbjct: 808  -ttgacgtcgcagatctcgcccttgggcgacatggggagcagcgtctggatgatggggtc 750

                 
Query: 615  ggagc 619
            |||||
Sbjct: 749  ggagc 745
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>gb|J04219.1|CREATPS C.reinhardtii chloroplast ATP synthase gamma subunit mRNA, complete
           cds
          Length = 1772

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 118/142 (83%), Gaps = 1/142 (0%)
 Strand = Plus / Minus

                                                                       
Query: 472 tcttctcgcgctccacggtgagcttgccttccttggtggtgagcttgaagagctcgtcct 531
           |||||||||||||||||| || || |||  |||||||||| |||||||||| |||||| |
Sbjct: 816 tcttctcgcgctccacggcgaactcgccgcccttggtggtcagcttgaagatctcgtcgt 757

                                                                       
Query: 532 cggtggcgtcgacacagatgccgtttgacgtcgcagatctcgcccttaggggacatgggc 591
           | | |||||| || ||  ||||| |  |||||||| | ||||||| | |||| |||||||
Sbjct: 756 cagcggcgtccacgcacttgccg-tccacgtcgcacagctcgcccatgggggtcatgggc 698

                                 
Query: 592 agcagcgtctggatgatggggt 613
           ||||| ||||||||| ||||||
Sbjct: 697 agcagggtctggatggtggggt 676



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 402 gcgtcgaggatctggacggggtcctgctcgaa 433
           ||||| ||||||||| |||| |||||||||||
Sbjct: 886 gcgtccaggatctgggcgggctcctgctcgaa 855
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>gb|M73493.1|CREATPC Chlamydomonas reinhardtii ATP synthase (CF1) gamma subunit gene,
            complete CDS
          Length = 2913

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 118/142 (83%), Gaps = 1/142 (0%)
 Strand = Plus / Minus

                                                                        
Query: 472  tcttctcgcgctccacggtgagcttgccttccttggtggtgagcttgaagagctcgtcct 531
            |||||||||||||||||| || || |||  |||||||||| |||||||||| |||||| |
Sbjct: 2029 tcttctcgcgctccacggcgaactcgccgcccttggtggtcagcttgaagatctcgtcgt 1970

                                                                        
Query: 532  cggtggcgtcgacacagatgccgtttgacgtcgcagatctcgcccttaggggacatgggc 591
            | | |||||| || ||  ||||| |  |||||||| | ||||||| | |||| |||||||
Sbjct: 1969 cagcggcgtccacgcacttgccg-tccacgtcgcacagctcgcccatgggggtcatgggc 1911

                                  
Query: 592  agcagcgtctggatgatggggt 613
            ||||| ||||||||| ||||||
Sbjct: 1910 agcagggtctggatggtggggt 1889



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 402  gcgtcgaggatctggacggggtcctgctcgaa 433
            ||||| ||||||||| |||| |||||||||||
Sbjct: 2099 gcgtccaggatctgggcgggctcctgctcgaa 2068
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>gb|DQ122880.1| Chlamydomonas incerta chloroplast ATP synthase gamma subunit (AtpC)
           mRNA, partial cds; nuclear gene for chloroplast product
          Length = 696

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 121/147 (82%), Gaps = 1/147 (0%)
 Strand = Plus / Minus

                                                                       
Query: 472 tcttctcgcgctccacggtgagcttgccttccttggtggtgagcttgaagagctcgtcct 531
           |||||||||||||||||| || |  |||  |||||||||| |||||||||| ||| || |
Sbjct: 463 tcttctcgcgctccacggcgaacgcgccgcccttggtggtcagcttgaagatctcatcgt 404

                                                                       
Query: 532 cggtggcgtcgacacagatgccgtttgacgtcgcagatctcgcccttaggggacatgggc 591
           ||| |||||| || ||  ||||||   |||||||| | ||||||| | |||| |||||||
Sbjct: 403 cggcggcgtccacgcacttgccgtcc-acgtcgcacagctcgcccatgggggtcatgggc 345

                                      
Query: 592 agcagcgtctggatgatggggtcggag 618
           ||||| ||||||||| |||||| ||||
Sbjct: 344 agcagggtctggatggtggggttggag 318



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 402 gcgtcgaggatctggacggggtcctgctcgaa 433
           ||||| ||||||||| |||| |||||||||||
Sbjct: 533 gcgtccaggatctgggcgggctcctgctcgaa 502
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>emb|X70650.1|OSATPASE O.sinensis mRNA for gamma subunit of plastid ATPase
          Length = 1327

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 351 gactcctggagggcacgcaggatctggctgttgaggtagagcgggaggagagcgtcgagg 410
           ||||||||||| |  || |||||||||| |||||||||||| |||||||  | || || |
Sbjct: 975 gactcctggagcgtgcggaggatctggccgttgaggtagagggggaggatggagttgatg 916

                                  
Query: 411 atctggacggggtcctgctcgaa 433
           ||||||| |||||||||||||||
Sbjct: 915 atctggatggggtcctgctcgaa 893
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>gb|AY826836.1| Isochrysis galbana clone ISATPG1 chloroplast ATP synthase gamma
           subunit mRNA, partial cds; nuclear gene for chloroplast
           product
          Length = 900

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 369 aggatctggctgttgaggtagagcgggagga 399
           |||||||||| ||||||||||||||||||||
Sbjct: 885 aggatctggccgttgaggtagagcgggagga 855
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>gb|AC087888.12| Homo sapiens 12 BAC RP11-228G3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 87788

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 135   aaggaggcaaagagttatatataa 158
             ||||||||||||||||||||||||
Sbjct: 75558 aaggaggcaaagagttatatataa 75535
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>gb|AC114785.5| Homo sapiens BAC clone RP11-607G14 from 2, complete sequence
          Length = 118022

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 85   tacaaacacagacacagaccaa 106
            ||||||||||||||||||||||
Sbjct: 7121 tacaaacacagacacagaccaa 7142
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>gb|U88181.1| Caenorhabditis elegans cosmid C55B6, complete sequence
          Length = 25003

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 74    tgagaaattattacaaacaca 94
             |||||||||||||||||||||
Sbjct: 19896 tgagaaattattacaaacaca 19876
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>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05,
              complete sequence
          Length = 153368

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    agaagagaggagaaaaggagg 141
              |||||||||||||||||||||
Sbjct: 140157 agaagagaggagaaaaggagg 140177
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>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence
          Length = 218698

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   agaagagaggagaaaaggagg 141
             |||||||||||||||||||||
Sbjct: 15174 agaagagaggagaaaaggagg 15194
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>gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosome 8, complete
            sequence
          Length = 199356

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 121  agaagagaggagaaaaggagg 141
            |||||||||||||||||||||
Sbjct: 3705 agaagagaggagaaaaggagg 3685
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>emb|AL158817.11| Human DNA sequence from clone RP3-429O6 on chromosome 6 Contains part
             of a novel gene and a CpG island, complete sequence
          Length = 120529

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 124   agagaggagaaaaggaggcaaagag 148
             |||||||||||||||||| ||||||
Sbjct: 57721 agagaggagaaaaggaggaaaagag 57697
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>gb|AY267622.1| Bigelowiella natans ATP synthase gamma subunit mRNA, complete cds;
            nuclear gene for plastid product
          Length = 1351

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 198  gcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcg 250
            ||||| || ||||||||||||||||| || ||   ||||||||| ||||||||
Sbjct: 1174 gcgtctgcaccagcgacgatctcaagaatttcattggtgatcttagcctggcg 1122
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>emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluster for biosynthesis of
             glycopeptide antibiotic A40926, strain ATCC 39727
          Length = 89153

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 522   agctcgtcctcggtggcgtcg 542
             |||||||||||||||||||||
Sbjct: 54302 agctcgtcctcggtggcgtcg 54282
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>gb|AC068298.16| Homo sapiens 3 BAC RP11-496B10 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 180335

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 125  gagaggagaaaaggaggcaaa 145
            |||||||||||||||||||||
Sbjct: 8264 gagaggagaaaaggaggcaaa 8244
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>gb|AC118139.3| Homo sapiens BAC clone RP11-461K12 from 4, complete sequence
          Length = 54171

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 121 agaagagaggagaaaaggagg 141
           |||||||||||||||||||||
Sbjct: 459 agaagagaggagaaaaggagg 479
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>gb|AC107365.2| Danio rerio, clone -241I7, complete sequence
          Length = 128411

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 121    agaagagaggagaaaaggagg 141
              |||||||||||||||||||||
Sbjct: 127553 agaagagaggagaaaaggagg 127533
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>gb|DQ337864.1| Uncultured bacterium clone Psedi_nirS-31 NirS (nirS) gene, partial
           cds
          Length = 410

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 487 cggtgagcttgccttccttgg 507
           |||||||||||||||||||||
Sbjct: 193 cggtgagcttgccttccttgg 173
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 512     gagcttgaagagctcgtcctcggtggcgt 540
               |||||||||| ||||||||||||| ||||
Sbjct: 2076582 gagcttgaagcgctcgtcctcggtcgcgt 2076610
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 121      agaagagaggagaaaaggagg 141
                |||||||||||||||||||||
Sbjct: 18346945 agaagagaggagaaaaggagg 18346965
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>gb|AF088219.1|AF088219 Homo sapiens CC chemokine gene cluster, complete sequence
          Length = 180919

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   gataagtactagaagagagga 131
             |||||||||||||||||||||
Sbjct: 90350 gataagtactagaagagagga 90330
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>emb|CR382300.12| Zebrafish DNA sequence from clone DKEY-25E11 in linkage group 19,
             complete sequence
          Length = 202006

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   agaagagaggagaaaaggagg 141
             |||||||||||||||||||||
Sbjct: 35716 agaagagaggagaaaaggagg 35736
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>gb|AC006572.2|AC006572 Homo sapiens, clone hRPK.60_A_1, complete sequence
          Length = 179691

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    agaagagaggagaaaaggagg 141
              |||||||||||||||||||||
Sbjct: 178150 agaagagaggagaaaaggagg 178170
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>gb|AC004675.1|AC004675 Homo sapiens chromosome 17, clone hCIT.186_H_2, complete sequence
          Length = 128501

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 111   gataagtactagaagagagga 131
             |||||||||||||||||||||
Sbjct: 88143 gataagtactagaagagagga 88163
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 487     cggtgagcttgccttccttggtgg 510
               |||||| |||||||||||||||||
Sbjct: 2544786 cggtgatcttgccttccttggtgg 2544809
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     cgctgctcatggcgctcatc 326
               ||||||||||||||||||||
Sbjct: 2764884 cgctgctcatggcgctcatc 2764903
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 460     tctcgatcttgatcttctcg 479
               ||||||||||||||||||||
Sbjct: 2806038 tctcgatcttgatcttctcg 2806057
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 460     tctcgatcttgatcttctcg 479
               ||||||||||||||||||||
Sbjct: 2294556 tctcgatcttgatcttctcg 2294537
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>ref|XM_957789.1| Neurospora crassa OR74A hypothetical protein (NCU06278.1) partial
            mRNA
          Length = 3252

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 517  tgaagagctcgtcctcggtggcgtcgac 544
            ||||||||| ||||| ||||||||||||
Sbjct: 2533 tgaagagctggtccttggtggcgtcgac 2506
to top
>ref|XM_326132.1| Neurospora crassa OR74A hypothetical protein (NCU06278.1) partial
            mRNA
          Length = 3252

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 517  tgaagagctcgtcctcggtggcgtcgac 544
            ||||||||| ||||| ||||||||||||
Sbjct: 2533 tgaagagctggtccttggtggcgtcgac 2506
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 460     tctcgatcttgatcttctcg 479
               ||||||||||||||||||||
Sbjct: 1366988 tctcgatcttgatcttctcg 1366969
to top
>gb|AC122903.4| Mus musculus BAC clone RP23-44N5 from chromosome 1, complete sequence
          Length = 169832

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     ttacaaacacagacacagac 103
              ||||||||||||||||||||
Sbjct: 134653 ttacaaacacagacacagac 134672
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>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
              through 10 and partial cds
          Length = 688489

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     tacaaacacagacacagacc 104
              ||||||||||||||||||||
Sbjct: 401220 tacaaacacagacacagacc 401239
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>emb|Z81119.1|CET10H4 Caenorhabditis elegans Cosmid T10H4, complete sequence
          Length = 33319

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    agaaattattacaaacacag 95
             ||||||||||||||||||||
Sbjct: 12793 agaaattattacaaacacag 12812
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>gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, complete sequence
          Length = 232817

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   aggagaaaaggaggcaaaga 147
             ||||||||||||||||||||
Sbjct: 78802 aggagaaaaggaggcaaaga 78783
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>gb|AC118351.14| Rattus norvegicus 1 BAC CH230-362O18 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 143705

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    ggagaaaaggaggcaaagag 148
              ||||||||||||||||||||
Sbjct: 125135 ggagaaaaggaggcaaagag 125116
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>emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chromosome 6 Contains a fem-1
              homolog a (C. elegans) (FEM1A) pseudogene, a keratin 18
              (KRT18) pseudogene, a laminin receptor 1 (67kD, ribosomal
              protein SA) (LAMR1)(RPSA) pseudogene, a hepatocellular
              carcinoma-related putative tumor suppressor (LPTS)
              pseudogene and the 3' end of a novel gene, complete
              sequence
          Length = 210107

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    tactagaagagaggagaaaa 136
              ||||||||||||||||||||
Sbjct: 191747 tactagaagagaggagaaaa 191728
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 460     tctcgatcttgatcttctcg 479
               ||||||||||||||||||||
Sbjct: 1245988 tctcgatcttgatcttctcg 1245969



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 194     cagggcgtcggcgccagcga 213
               ||||||||||||||||||||
Sbjct: 1196169 cagggcgtcggcgccagcga 1196188
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>emb|BX053660.1|CNS09DKG Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC31BH07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 387

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 590 gcagcagcgtctggatgatg 609
           ||||||||||||||||||||
Sbjct: 284 gcagcagcgtctggatgatg 303
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>emb|BX053659.1|CNS09DKF Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC31BH07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 567

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 590 gcagcagcgtctggatgatg 609
           ||||||||||||||||||||
Sbjct: 490 gcagcagcgtctggatgatg 471
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>gb|AC154570.2| Mus musculus BAC clone RP23-385M5 from chromosome 14, complete sequence
          Length = 209218

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     tacaaacacagacacagacc 104
              ||||||||||||||||||||
Sbjct: 108436 tacaaacacagacacagacc 108417
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>gb|AC006454.4| Homo sapiens PAC clone RP5-852P6 from 7, complete sequence
          Length = 153203

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   gcagctcagcccagggagga 183
             ||||||||||||||||||||
Sbjct: 13876 gcagctcagcccagggagga 13857
to top
>emb|BX927151.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 4/10
          Length = 349459

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 459    atctcgatcttgatcttctc 478
              ||||||||||||||||||||
Sbjct: 184390 atctcgatcttgatcttctc 184409
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 460     tctcgatcttgatcttctcg 479
               ||||||||||||||||||||
Sbjct: 1238910 tctcgatcttgatcttctcg 1238891
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>emb|AL929280.6| Mouse DNA sequence from clone RP23-67M20 on chromosome 11 Contains a
              novel gene (2810471M01Rik), the 5' end of the gene for a
              novel protein (E030025D05Rik) and a CpG island, complete
              sequence
          Length = 216627

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     acacagacacagaccaagca 109
              ||||||||||||||||||||
Sbjct: 113992 acacagacacagaccaagca 113973
to top
>emb|AL663060.6| Mouse DNA sequence from clone RP23-239H6 on chromosome 11, complete
             sequence
          Length = 218635

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    acacagaccaagcaagataa 115
             ||||||||||||||||||||
Sbjct: 54294 acacagaccaagcaagataa 54275
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>gb|AC011193.3| Homo sapiens chromosome 17, clone RP11-521P1, complete sequence
          Length = 181022

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   gaagagaggagaaaaggagg 141
             ||||||||||||||||||||
Sbjct: 27254 gaagagaggagaaaaggagg 27235
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>gb|AC073761.4| Mus musculus chromosome 17 clone RP23-33K21, complete sequence
          Length = 206801

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 126  agaggagaaaaggaggcaaagagt 149
            ||||||||||||||| ||||||||
Sbjct: 3628 agaggagaaaaggagtcaaagagt 3605
to top
>gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152599

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   ctcatggcgctcatcctggc 331
             ||||||||||||||||||||
Sbjct: 39643 ctcatggcgctcatcctggc 39624
to top
>gb|AC092111.9| Homo sapiens 12 BAC RP11-266K4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 138313

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 312    ctcatggcgctcatcctggc 331
              ||||||||||||||||||||
Sbjct: 114733 ctcatggcgctcatcctggc 114714
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>dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBa, evx
             homologue on hoxBa
          Length = 235883

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   agaagagaggagaaaaggag 140
             ||||||||||||||||||||
Sbjct: 76918 agaagagaggagaaaaggag 76937
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>gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequence
          Length = 183894

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   gaagagaggagaaaaggagg 141
             ||||||||||||||||||||
Sbjct: 48112 gaagagaggagaaaaggagg 48131
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>gb|DQ337883.1| Uncultured bacterium clone S1m_nirS-22 NirS (nirS) gene, partial
           cds
          Length = 410

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 488 ggtgagcttgccttccttgg 507
           ||||||||||||||||||||
Sbjct: 192 ggtgagcttgccttccttgg 173
to top
>gb|DQ337869.1| Uncultured bacterium clone Psedi_nirS-41 NirS (nirS) gene, partial
           cds
          Length = 413

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 490 tgagcttgccttccttggtg 509
           ||||||||||||||||||||
Sbjct: 190 tgagcttgccttccttggtg 171
to top
>gb|DQ337840.1| Uncultured bacterium clone P1m_nirS-15 NirS (nirS) gene, partial
           cds
          Length = 413

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 490 tgagcttgccttccttggtg 509
           ||||||||||||||||||||
Sbjct: 190 tgagcttgccttccttggtg 171
to top
>gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, complete sequence
          Length = 227950

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    gaaaaggaggcaaagagtta 151
              ||||||||||||||||||||
Sbjct: 105449 gaaaaggaggcaaagagtta 105468
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>gb|AC157870.3| Loxodonta africana clone VMRC15-210D1, complete sequence
          Length = 123158

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 493   gcttgccttccttggtggtg 512
             ||||||||||||||||||||
Sbjct: 49361 gcttgccttccttggtggtg 49342
to top
>dbj|AK051229.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130019J16
           product:unclassifiable, full insert sequence
          Length = 2020

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  ttacaaacacagacacagac 103
           ||||||||||||||||||||
Sbjct: 511 ttacaaacacagacacagac 492
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>gb|AC012336.9|AC012336 Homo sapiens chromosome 17, clone CTD-2236G12, complete sequence
          Length = 40405

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   gaagagaggagaaaaggagg 141
             ||||||||||||||||||||
Sbjct: 10132 gaagagaggagaaaaggagg 10151
to top
>dbj|AK037782.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130049I01
           product:unclassifiable, full insert sequence
          Length = 1553

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  ttacaaacacagacacagac 103
           ||||||||||||||||||||
Sbjct: 649 ttacaaacacagacacagac 630
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>dbj|AK043901.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830048L15
           product:unclassifiable, full insert sequence
          Length = 1373

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 123 aagagaggagaaaaggaggcaaag 146
           |||||||||||| |||||||||||
Sbjct: 729 aagagaggagaagaggaggcaaag 706
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 85       tacaaacacagacacagacc 104
                ||||||||||||||||||||
Sbjct: 21304663 tacaaacacagacacagacc 21304682



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 56       acatccttttttgtgctatg 75
                ||||||||||||||||||||
Sbjct: 19087865 acatccttttttgtgctatg 19087846
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 119      ctagaagagaggagaaaagg 138
                ||||||||||||||||||||
Sbjct: 20600956 ctagaagagaggagaaaagg 20600937
to top
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 459     atctcgatcttgatcttctc 478
               ||||||||||||||||||||
Sbjct: 1229205 atctcgatcttgatcttctc 1229224
to top
>gb|AC105916.4| Homo sapiens BAC clone RP11-180A12 from 4, complete sequence
          Length = 104269

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   ggcagctcagcccagggagg 182
             ||||||||||||||||||||
Sbjct: 81855 ggcagctcagcccagggagg 81874
to top
>emb|AL929073.19| Mouse DNA sequence from clone RP23-125D6 on chromosome 4, complete
             sequence
          Length = 129246

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   gaagagaggagaaaaggagg 141
             ||||||||||||||||||||
Sbjct: 16741 gaagagaggagaaaaggagg 16760
to top
>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0656E03
          Length = 181786

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     tacaaacacagacacagacc 104
              ||||||||||||||||||||
Sbjct: 100039 tacaaacacagacacagacc 100058
to top
>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1616_B03
          Length = 96081

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    acatccttttttgtgctatg 75
             ||||||||||||||||||||
Sbjct: 85349 acatccttttttgtgctatg 85330
to top
>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0051E21
          Length = 137959

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   ctagaagagaggagaaaagg 138
             ||||||||||||||||||||
Sbjct: 96514 ctagaagagaggagaaaagg 96495
to top
>dbj|AK121910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105O17, full
           insert sequence
          Length = 1563

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  acatccttttttgtgctatg 75
           ||||||||||||||||||||
Sbjct: 859 acatccttttttgtgctatg 840
to top
>dbj|AK101846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069I17, full
           insert sequence
          Length = 3061

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  acatccttttttgtgctatg 75
           ||||||||||||||||||||
Sbjct: 865 acatccttttttgtgctatg 846
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 460     tctcgatcttgatcttctcg 479
               ||||||||||||||||||||
Sbjct: 1065662 tctcgatcttgatcttctcg 1065643
to top
>gb|AC154142.24| Mus musculus chromosome 1, clone RP23-187M7, complete sequence
          Length = 237824

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    gaaaaggaggcaaagagtta 151
              ||||||||||||||||||||
Sbjct: 188353 gaaaaggaggcaaagagtta 188372
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>emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chromosome 2, complete
              sequence
          Length = 209914

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 123    aagagaggagaaaaggaggcaaag 146
              |||||||||||| |||||||||||
Sbjct: 178379 aagagaggagaagaggaggcaaag 178356
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>dbj|AB032374.1| Mus musculus gene for Tbr1, 5' flanking region
          Length = 4570

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 123  aagagaggagaaaaggaggcaaag 146
            |||||||||||| |||||||||||
Sbjct: 3905 aagagaggagaagaggaggcaaag 3882
to top
>dbj|AB015309.1| Acidovorax sp. TP4 gene for PHB depolymerase, complete cds
          Length = 3846

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 303  gtggcgctgctcatggcgct 322
            ||||||||||||||||||||
Sbjct: 2294 gtggcgctgctcatggcgct 2313


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,154,338
Number of Sequences: 3902068
Number of extensions: 5154338
Number of successful extensions: 136930
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 136083
Number of HSP's gapped (non-prelim): 837
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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