ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CP1A1_OPSTA (Q92095) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1) 30 2.5
2CP1A1_DICLA (P79716) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1) 28 9.7
3CSKI2_HUMAN (Q8WXE0) Caskin-2 28 9.7
4CP1A1_STECH (Q92116) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1) 28 9.7
5CP1A1_SPAAU (O42457) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1) 28 9.7
6CP1A1_PLEPL (Q92100) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1) 28 9.7
7CP1A1_PLAFE (Q9YH64) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1) 28 9.7
8CP1A1_LIMLI (O42430) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1) 28 9.7

>CP1A1_OPSTA (Q92095) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)|
          Length = 521

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 159 KNASLRAGFVPRLSCTFFHHWNI*H 85
           KN SL   F+P+ +C F + W I H
Sbjct: 397 KNTSLNGYFIPKDTCVFINQWQINH 421



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>CP1A1_DICLA (P79716) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)|
          Length = 520

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 159 KNASLRAGFVPRLSCTFFHHWNI*H 85
           K+ SL   F+P+ +C F + W I H
Sbjct: 398 KDTSLNGYFIPKDTCVFINQWQINH 422



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>CSKI2_HUMAN (Q8WXE0) Caskin-2|
          Length = 1202

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 20/64 (31%), Positives = 25/64 (39%)
 Frame = -2

Query: 383 SWETGPGSVPDDEPRPXXXXXXGAXSTRTRSLSPPASPPVAHRNSEE*GISIIPGLCPTL 204
           S+  GP + P D PRP           R+ SLS P           E  +    G   TL
Sbjct: 779 SYLAGPPATPPDPPRP---------KRRSHSLSRPGPTEGDAEGEAEGPVGSTLGSYATL 829

Query: 203 TKRP 192
           T+RP
Sbjct: 830 TRRP 833



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>CP1A1_STECH (Q92116) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)|
          Length = 521

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 159 KNASLRAGFVPRLSCTFFHHWNI*H 85
           K+ SL   F+P+ +C F + W I H
Sbjct: 397 KDTSLNGYFIPKDTCVFINQWQINH 421



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>CP1A1_SPAAU (O42457) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)|
          Length = 521

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 159 KNASLRAGFVPRLSCTFFHHWNI*H 85
           K+ SL   F+P+ +C F + W I H
Sbjct: 397 KDTSLNGYFIPKDTCVFINQWQINH 421



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>CP1A1_PLEPL (Q92100) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)|
          Length = 521

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 159 KNASLRAGFVPRLSCTFFHHWNI*H 85
           K+ SL   F+P+ +C F + W I H
Sbjct: 397 KDTSLNGYFIPKDTCVFINQWQINH 421



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>CP1A1_PLAFE (Q9YH64) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)|
          Length = 521

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 159 KNASLRAGFVPRLSCTFFHHWNI*H 85
           K+ SL   F+P+ +C F + W I H
Sbjct: 397 KDTSLNGYFIPKDTCVFINQWQINH 421



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>CP1A1_LIMLI (O42430) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)|
          Length = 521

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 159 KNASLRAGFVPRLSCTFFHHWNI*H 85
           K+ SL   F+P+ +C F + W I H
Sbjct: 397 KDTSLNGYFIPKDTCVFINQWQINH 421


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,349,558
Number of Sequences: 219361
Number of extensions: 1155233
Number of successful extensions: 2538
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2534
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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