ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal3a04 |
|---|---|
| Clone Library Name | barley_pub |
>UBP14_HUMAN (P54578) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 493 Score = 85.5 bits (210), Expect = 1e-16 Identities = 44/94 (46%), Positives = 53/94 (56%) Frame = -1 Query: 541 GIYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIE 362 G YDL AVLTH+GRS+ SGHYV WVK+ + WI+ Sbjct: 415 GYYDLQAVLTHQGRSSSSGHYVSWVKRKQDE--------------------------WIK 448 Query: 361 FDDDNPSIRKEEEILKLSGGGDWHMAYICLYKAR 260 FDDD SI E+IL+LSGGGDWH+AY+ LY R Sbjct: 449 FDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPR 482
>UBP14_PANTR (P60051) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 492 Score = 85.5 bits (210), Expect = 1e-16 Identities = 44/94 (46%), Positives = 53/94 (56%) Frame = -1 Query: 541 GIYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIE 362 G YDL AVLTH+GRS+ SGHYV WVK+ + WI+ Sbjct: 415 GYYDLQAVLTHQGRSSSSGHYVSWVKRKQDE--------------------------WIK 448 Query: 361 FDDDNPSIRKEEEILKLSGGGDWHMAYICLYKAR 260 FDDD SI E+IL+LSGGGDWH+AY+ LY R Sbjct: 449 FDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPR 482
>UBP14_CAEEL (Q17361) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 489 Score = 85.1 bits (209), Expect = 2e-16 Identities = 41/97 (42%), Positives = 54/97 (55%) Frame = -1 Query: 544 TGIYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWI 365 +G YDL ++THKGRS+ GHYV W++ + GKW Sbjct: 389 SGFYDLKGIITHKGRSSQDGHYVAWMRSSE-------------------------DGKWR 423 Query: 364 EFDDDNPSIRKEEEILKLSGGGDWHMAYICLYKARVI 254 FDD++ ++ EE ILK SGGGDWH AY+ LY+ARVI Sbjct: 424 LFDDEHVTVVDEEAILKTSGGGDWHSAYVLLYEARVI 460
>UBP14_RABIT (P40826) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 492 Score = 85.1 bits (209), Expect = 2e-16 Identities = 44/94 (46%), Positives = 53/94 (56%) Frame = -1 Query: 541 GIYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIE 362 G YDL AVLTH+GRS+ SGHYV WVK+ + WI+ Sbjct: 414 GYYDLQAVLTHQGRSSSSGHYVSWVKRKHDE--------------------------WIK 447 Query: 361 FDDDNPSIRKEEEILKLSGGGDWHMAYICLYKAR 260 FDDD SI E+IL+LSGGGDWH+AY+ LY R Sbjct: 448 FDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPR 481
>UBP14_MOUSE (Q9JMA1) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 492 Score = 84.3 bits (207), Expect = 3e-16 Identities = 43/94 (45%), Positives = 53/94 (56%) Frame = -1 Query: 541 GIYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIE 362 G YDL AVLTH+GRS+ SGHYV WV++ + WI+ Sbjct: 414 GYYDLQAVLTHQGRSSSSGHYVSWVRRKQDE--------------------------WIK 447 Query: 361 FDDDNPSIRKEEEILKLSGGGDWHMAYICLYKAR 260 FDDD SI E+IL+LSGGGDWH+AY+ LY R Sbjct: 448 FDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPR 481
>UBP6_SCHPO (Q92353) Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15)| (Ubiquitin thiolesterase 6) (Ubiquitin-specific processing protease 6) (Deubiquitinating enzyme 6) Length = 467 Score = 63.9 bits (154), Expect = 4e-10 Identities = 35/97 (36%), Positives = 47/97 (48%) Frame = -1 Query: 544 TGIYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWI 365 TG+YDL+ VL+H G SA SGHY W++ + + +W Sbjct: 394 TGLYDLVGVLSHAGASASSGHYQAWIRNSNNR------------------------AEWF 429 Query: 364 EFDDDNPSIRKEEEILKLSGGGDWHMAYICLYKARVI 254 F+D SI E+I L GGG+ AYI LYKA+ I Sbjct: 430 RFNDAKVSIVPAEKIETLDGGGEADSAYILLYKAKDI 466
>UBP6_YEAST (P43593) Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15)| (Ubiquitin thioesterase 6) (Ubiquitin-specific-processing protease 6) (Deubiquitinating enzyme 6) Length = 499 Score = 53.9 bits (128), Expect = 5e-07 Identities = 27/91 (29%), Positives = 47/91 (51%) Frame = -1 Query: 538 IYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIEF 359 +Y+LI V+TH+G +++SGHY +++ + KW +F Sbjct: 429 VYNLIGVITHQGANSESGHYQAFIRDE------------------------LDENKWYKF 464 Query: 358 DDDNPSIRKEEEILKLSGGGDWHMAYICLYK 266 +DD S+ ++E+I L+GGG+ A I +YK Sbjct: 465 NDDKVSVVEKEKIESLAGGGESDSALILMYK 495
>UBP10_YEAST (P53874) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)| (Ubiquitin thioesterase 10) (Ubiquitin-specific-processing protease 10) (Deubiquitinating enzyme 10) (Disrupter of telomere silencing protein 4) Length = 792 Score = 42.0 bits (97), Expect = 0.002 Identities = 24/80 (30%), Positives = 35/80 (43%) Frame = -1 Query: 553 KQLTGIYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSG 374 K+L Y L++V+ H+GRS SGHY+ KQ D G Sbjct: 668 KELPVKYQLLSVVVHEGRSLSSGHYIAHCKQPD--------------------------G 701 Query: 373 KWIEFDDDNPSIRKEEEILK 314 W +DD+ +I E ++LK Sbjct: 702 SWATYDDEYINIISERDVLK 721
>UBP18_HUMAN (Q9UMW8) Ubl carboxyl-terminal hydrolase 18 (EC 3.1.2.-) (Ubl| thioesterase 18) (ISG15-specific-processing protease) (43 kDa ISG15-specific protease) (hUBP43) Length = 372 Score = 35.4 bits (80), Expect(2) = 0.028 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 3/104 (2%) Frame = -1 Query: 571 DSSVPKKQLTGIYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILII 392 +S ++Q G Y+L AV+ H G ADSGHY +++ Sbjct: 290 ESCDAEEQSGGQYELFAVIAHVG-MADSGHYCVYIRN----------------------- 325 Query: 391 SCCHSGKWIEFDDDNPSIRKEEEILKLSGGGDWH---MAYICLY 269 GKW F+D N + E+I G ++H AY+ +Y Sbjct: 326 --AVDGKWFCFNDSNICLVSWEDIQCTYGNPNYHWQETAYLLVY 367 Score = 21.6 bits (44), Expect(2) = 0.028 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -2 Query: 636 KILRGHQLVPGNHLAWTLTKQLILLCQRNN 547 K RG Q++ HL TLT L+ RN+ Sbjct: 235 KKTRGKQVLKLTHLPQTLTIHLMRFSIRNS 264
>UBP9_YEAST (P39967) Ubiquitin carboxyl-terminal hydrolase 9 (EC 3.1.2.15)| (Ubiquitin thioesterase 9) (Ubiquitin-specific-processing protease 9) (Deubiquitinating enzyme 9) Length = 754 Score = 37.7 bits (86), Expect = 0.034 Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 3/112 (2%) Frame = -1 Query: 592 MDIDKAADSSVPKKQLTGIYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLW 413 +D+ ++SV KK Y+L V+ H G GHYV Sbjct: 587 LDVSSTFNTSVYKK-----YELSGVVIHMGSGPQHGHYV--------------------- 620 Query: 412 PCNILIISCCHSGK--WIEFDDDNPSIRKEEEILKLSG-GGDWHMAYICLYK 266 C + K W+ +DD+ KEE +L+ +G GD AY+ YK Sbjct: 621 -------CICRNEKFGWLLYDDETVESIKEETVLQFTGHPGDQTTAYVLFYK 665
>UBP3_HUMAN (Q9Y6I4) Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)| (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3) Length = 521 Score = 37.4 bits (85), Expect = 0.044 Identities = 23/90 (25%), Positives = 32/90 (35%) Frame = -1 Query: 538 IYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIEF 359 +YDL AV+ H G SGHY + H G+W F Sbjct: 454 LYDLAAVVVHHGSGVGSGHYTAY---------------------------ATHEGRWFHF 486 Query: 358 DDDNPSIRKEEEILKLSGGGDWHMAYICLY 269 +D ++ EE ++K AYI Y Sbjct: 487 NDSTVTLTDEETVVKAK-------AYILFY 509
>UBPE_DROME (Q24574) Ubiquitin carboxyl-terminal hydrolase 64E (EC 3.1.2.15)| (Ubiquitin thioesterase 64E) (Ubiquitin-specific-processing protease 64E) (Deubiquitinating enzyme 64E) Length = 1556 Score = 37.0 bits (84), Expect = 0.057 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 2/97 (2%) Frame = -1 Query: 586 IDKAADSSVPKKQLTG--IYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLW 413 ID ++ +S KQ +G +Y+L A++ H G SA GHY ++K D Sbjct: 685 IDMSSSTSKSAKQGSGPYLYELFAIMIHSG-SASGGHYYAYIKDFD-------------- 729 Query: 412 PCNILIISCCHSGKWIEFDDDNPSIRKEEEILKLSGG 302 + +W F+D N + +E+I + GG Sbjct: 730 -----------NNEWFCFNDQNVTSITQEDIQRSFGG 755
>UBP35_HUMAN (Q9P2H5) Ubiquitin carboxyl-terminal hydrolase 35 (EC 3.1.2.15)| (Ubiquitin thioesterase 35) (Ubiquitin-specific-processing protease 35) (Deubiquitinating enzyme 35) Length = 1017 Score = 37.0 bits (84), Expect = 0.057 Identities = 24/92 (26%), Positives = 41/92 (44%) Frame = -1 Query: 535 YDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIEFD 356 YDL +V+ H G S++SGHY + ++ + + S +D P N +W F+ Sbjct: 844 YDLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPEN----------QWYLFN 893 Query: 355 DDNPSIRKEEEILKLSGGGDWHMAYICLYKAR 260 D S E + ++ AY+ Y+ R Sbjct: 894 DTRVSFSSFESVSNVTSFFPKDTAYVLFYRQR 925
>UBP3_MOUSE (Q91W36) Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)| (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3) Length = 520 Score = 36.6 bits (83), Expect = 0.075 Identities = 24/93 (25%), Positives = 32/93 (34%) Frame = -1 Query: 538 IYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIEF 359 +YDL AV+ H G SGHY + H G+W F Sbjct: 453 LYDLAAVVVHHGSGVGSGHYTAY---------------------------AVHEGRWFHF 485 Query: 358 DDDNPSIRKEEEILKLSGGGDWHMAYICLYKAR 260 +D ++ EE + K AYI Y R Sbjct: 486 NDSTVTVTDEETVGKAK-------AYILFYVER 511
>UBP8_YEAST (P50102) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)| (Ubiquitin thioesterase 8) (Ubiquitin-specific processing protease 8) (Deubiquitinating enzyme 8) Length = 471 Score = 36.6 bits (83), Expect = 0.075 Identities = 25/95 (26%), Positives = 39/95 (41%) Frame = -1 Query: 538 IYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIEF 359 IY+LI +++HKG + + GHY+ + K GQ W +F Sbjct: 410 IYELIGIVSHKG-TVNEGHYIAFCKISGGQ--------------------------WFKF 442 Query: 358 DDDNPSIRKEEEILKLSGGGDWHMAYICLYKARVI 254 +D S +EE+LK AY+ Y R + Sbjct: 443 NDSMVSSISQEEVLK-------EQAYLLFYTIRQV 470
>UBP4_HUMAN (Q13107) Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)| (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear protein homolog) Length = 963 Score = 35.8 bits (81), Expect = 0.13 Identities = 26/93 (27%), Positives = 37/93 (39%) Frame = -1 Query: 538 IYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIEF 359 +YDLIAV H G + GHY + K +GKW F Sbjct: 864 VYDLIAVSNHYG-AMGVGHYTAYAKNK-------------------------LNGKWYYF 897 Query: 358 DDDNPSIRKEEEILKLSGGGDWHMAYICLYKAR 260 DD N S+ E++I+ + AY+ Y+ R Sbjct: 898 DDSNVSLASEDQIVTKA-------AYVLFYQRR 923
>UBP14_SCHPO (Q11119) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) (UBA-domain-containing protein 2) Length = 775 Score = 35.4 bits (80), Expect = 0.17 Identities = 14/30 (46%), Positives = 25/30 (83%), Gaps = 1/30 (3%) Frame = -1 Query: 535 YDLIAVLTHKGRSADSGHYVGWVKQD-DGQ 449 Y+L A+++HKG SA +GHYV +++++ DG+ Sbjct: 713 YNLKAIISHKGSSAHAGHYVAFIRKEIDGK 742
>UBP47_HUMAN (Q96K76) Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15)| (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47) Length = 1375 Score = 35.4 bits (80), Expect = 0.17 Identities = 27/101 (26%), Positives = 39/101 (38%) Frame = -1 Query: 583 DKAADSSVPKKQLTGIYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCN 404 +K + S + K L IY+L +V+ H G SA GHY +K + Sbjct: 473 EKISKSGLEKNSL--IYELFSVMAHSG-SAAGGHYYACIKSFSDE--------------- 514 Query: 403 ILIISCCHSGKWIEFDDDNPSIRKEEEILKLSGGGDWHMAY 281 +W FDD + S +E+I K GG Y Sbjct: 515 ----------QWYSFDDQHVSRITQEDIKKTHGGSSGSRGY 545
>UBP24_HUMAN (Q9UPU5) Ubiquitin carboxyl-terminal hydrolase 24 (EC 3.1.2.15)| (Ubiquitin thioesterase 24) (Ubiquitin-specific-processing protease 24) (Deubiquitinating enzyme 24) Length = 1870 Score = 35.0 bits (79), Expect = 0.22 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Frame = -1 Query: 586 IDKAADSSVPKK-QLTGIYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWP 410 +D+ S KK LT Y+L+ V+ H G+ A +GHY ++K G Sbjct: 1186 VDQGGGGSPRKKVALTENYELVGVIVHSGQ-AHAGHYYSFIKDRRG-------------- 1230 Query: 409 CNILIISCCHSGKWIEFDD 353 C GKW +F+D Sbjct: 1231 --------CGKGKWYKFND 1241
>UBP13_YEAST (P38187) Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.1.2.15)| (Ubiquitin thioesterase 13) (Ubiquitin-specific-processing protease 13) (Deubiquitinating enzyme 13) Length = 688 Score = 34.7 bits (78), Expect = 0.28 Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 1/105 (0%) Frame = -1 Query: 535 YDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIEFD 356 Y+L ++ H G GHYV K + W+ FD Sbjct: 602 YELAGIVVHMGGGPQHGHYVSLCKHE--------------------------KFGWLLFD 635 Query: 355 DDNPSIRKEEEILKLSG-GGDWHMAYICLYKARVI*T*VDRLSAK 224 D+ KEE +L+ +G + AY+C K R I T + R+ K Sbjct: 636 DETVEAVKEETVLEFTGESPNMATAYVCFIK-RCIQTLLKRMIVK 679
>UBP3_YEAST (Q01477) Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)| (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3) Length = 912 Score = 34.3 bits (77), Expect = 0.37 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 7/115 (6%) Frame = -1 Query: 583 DKAADSSVPKKQLTGI----YDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTL 416 +++ S K +GI Y L V+ H G S+D GHY V + Sbjct: 824 EESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHSE------------- 870 Query: 415 WPCNILIISCCHSGKWIEFDDDNPSIRKEEEILKLSGG---GDWHMAYICLYKAR 260 KW DD N + +++++LK GG D AYI +Y+ R Sbjct: 871 ------------HNKWYRIDDVNITELEDDDVLK--GGEEASDSRTAYILMYQKR 911
>UBP36_HUMAN (Q9P275) Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.1.2.15)| (Ubiquitin thioesterase 36) (Ubiquitin-specific-processing protease 36) (Deubiquitinating enzyme 36) Length = 1121 Score = 34.3 bits (77), Expect = 0.37 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = -1 Query: 538 IYDLIAVLTHKGRSADSGHYVGWVKQDDGQ 449 +Y L AVL H G S +GHY +VK +GQ Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQ 393
>UBP4_MOUSE (P35123) Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)| (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear protein) Length = 962 Score = 33.9 bits (76), Expect = 0.48 Identities = 27/93 (29%), Positives = 39/93 (41%) Frame = -1 Query: 538 IYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIEF 359 +YDLIAV H G + GHY + K N L +GKW F Sbjct: 863 VYDLIAVSNHYG-AMGVGHYTAYAK-------------------NRL------NGKWYYF 896 Query: 358 DDDNPSIRKEEEILKLSGGGDWHMAYICLYKAR 260 DD + S+ E++I+ + AY+ Y+ R Sbjct: 897 DDSSVSLASEDQIVTKA-------AYVLFYQRR 922
>UBP44_HUMAN (Q9H0E7) Ubiquitin carboxyl-terminal hydrolase 44 (EC 3.1.2.15)| (Ubiquitin thioesterase 44) (Ubiquitin-specific-processing protease 44) (Deubiquitinating enzyme 44) Length = 712 Score = 33.9 bits (76), Expect = 0.48 Identities = 25/94 (26%), Positives = 34/94 (36%) Frame = -1 Query: 538 IYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIEF 359 IYDL AV+ H G+ SGHY + +G G W+ Sbjct: 618 IYDLSAVVMHHGKGFGSGHYTAYCYNSEG-------------------------GFWVHC 652 Query: 358 DDDNPSIRKEEEILKLSGGGDWHMAYICLYKARV 257 +D S+ +E+ K AYI Y RV Sbjct: 653 NDSKLSMCTMDEVCKA-------QAYILFYTQRV 679
>UBP49_HUMAN (Q70CQ1) Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15)| (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49) (Deubiquitinating enzyme 49) Length = 688 Score = 33.5 bits (75), Expect = 0.63 Identities = 27/105 (25%), Positives = 39/105 (37%) Frame = -1 Query: 568 SSVPKKQLTGIYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIIS 389 SS+ K+ T YDL AV+ H G+ SGHY + +G Sbjct: 589 SSLDKE--TFAYDLSAVVMHHGKGFGSGHYTAYCYNTEG--------------------- 625 Query: 388 CCHSGKWIEFDDDNPSIRKEEEILKLSGGGDWHMAYICLYKARVI 254 G W+ +D ++ EE+ K AYI Y R + Sbjct: 626 ----GFWVHCNDSKLNVCSVEEVCKT-------QAYILFYTQRTV 659
>UBP13_HUMAN (Q92995) Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.1.2.15)| (Ubiquitin thioesterase 13) (Ubiquitin-specific-processing protease 13) (Deubiquitinating enzyme 13) (Isopeptidase T-3) (ISOT-3) Length = 863 Score = 33.1 bits (74), Expect = 0.83 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -1 Query: 586 IDKAADSSVPKKQLTGIYDLIAVLTHKGRSADSGHYVGWVKQD 458 I +A K +G Y+L A ++H G S SGHY+ +K++ Sbjct: 789 ISEAKPEGPRVKDGSGTYELFAFISHMGTSTMSGHYICHIKKE 831
>UBP12_HUMAN (O75317) Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15)| (Ubiquitin thioesterase 12) (Ubiquitin-specific-processing protease 12) (Deubiquitinating enzyme 12) (Ubiquitin hydrolyzing enzyme 1) Length = 355 Score = 33.1 bits (74), Expect = 0.83 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -1 Query: 538 IYDLIAVLTHKGRSADSGHYVGWVKQDD 455 +YDL+AV+ H G + GHY+ VK D Sbjct: 284 MYDLVAVVVHCGSGPNRGHYIAIVKSHD 311
>UBP49_MOUSE (Q6P9L4) Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15)| (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49) (Deubiquitinating enzyme 49) Length = 685 Score = 33.1 bits (74), Expect = 0.83 Identities = 27/105 (25%), Positives = 38/105 (36%) Frame = -1 Query: 568 SSVPKKQLTGIYDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIIS 389 SS+ K+ T YDL AV+ H G+ SGHY + +G Sbjct: 586 SSLDKE--TFAYDLSAVVMHHGKGFGSGHYTAYCYNTEG--------------------- 622 Query: 388 CCHSGKWIEFDDDNPSIRKEEEILKLSGGGDWHMAYICLYKARVI 254 G W+ +D + EE+ K AYI Y R + Sbjct: 623 ----GFWVHCNDSKLDVCSVEEVCKT-------QAYILFYTRRTV 656
>UBP14_YEAST (P38237) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) (Glucose-induced degradation protein 6) Length = 803 Score = 32.3 bits (72), Expect = 1.4 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -1 Query: 535 YDLIAVLTHKGRSADSGHYVGWVKQ 461 Y L AV+ HKG S SGHYV ++++ Sbjct: 742 YALTAVICHKGNSVHSGHYVVFIRK 766
>UBP3_SCHPO (O94269) Probable ubiquitin carboxyl-terminal hydrolase 3 (EC| 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific processing protease 3) (Deubiquitinating enzyme 3) Length = 512 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 9/39 (23%) Frame = -1 Query: 535 YDLIAVLTHKGRSADSGHYV---------GWVKQDDGQI 446 YDL AV+ H G SA GHY GW + DD I Sbjct: 436 YDLNAVVYHHGTSASGGHYTVDVQQLDKSGWFRIDDTHI 474
>UBP15_MOUSE (Q8R5H1) Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.1.2.15)| (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15) (Deubiquitinating enzyme 15) Length = 981 Score = 31.6 bits (70), Expect = 2.4 Identities = 24/90 (26%), Positives = 33/90 (36%) Frame = -1 Query: 535 YDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIEFD 356 Y+LIAV H G GHY + K D GKW FD Sbjct: 875 YNLIAVSNHYG-GMGGGHYTAFAKNKD-------------------------DGKWYYFD 908 Query: 355 DDNPSIRKEEEILKLSGGGDWHMAYICLYK 266 D + S E++I+ + AY+ Y+ Sbjct: 909 DSSVSTASEDQIVSKA-------AYVLFYQ 931
>UBP15_HUMAN (Q9Y4E8) Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.1.2.15)| (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4) Length = 981 Score = 31.6 bits (70), Expect = 2.4 Identities = 24/90 (26%), Positives = 33/90 (36%) Frame = -1 Query: 535 YDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIEFD 356 Y+LIAV H G GHY + K D GKW FD Sbjct: 875 YNLIAVSNHYG-GMGGGHYTAFAKNKD-------------------------DGKWYYFD 908 Query: 355 DDNPSIRKEEEILKLSGGGDWHMAYICLYK 266 D + S E++I+ + AY+ Y+ Sbjct: 909 DSSVSTASEDQIVSKA-------AYVLFYQ 931
>UBP46_MOUSE (P62069) Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15)| (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46) Length = 366 Score = 30.8 bits (68), Expect = 4.1 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -1 Query: 547 LTGIYDLIAVLTHKGRSADSGHYVGWVK 464 L +YDL+AV+ H G + GHY+ VK Sbjct: 292 LDRMYDLVAVVVHCGSGPNRGHYITIVK 319
>UBP46_HUMAN (P62068) Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15)| (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46) Length = 366 Score = 30.8 bits (68), Expect = 4.1 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -1 Query: 547 LTGIYDLIAVLTHKGRSADSGHYVGWVK 464 L +YDL+AV+ H G + GHY+ VK Sbjct: 292 LDRMYDLVAVVVHCGSGPNRGHYITIVK 319
>UBPA_DICDI (P54201) Ubiquitin carboxyl-terminal hydrolase A (EC 3.1.2.15)| (Ubiquitin thioesterase A) (Ubiquitin-specific-processing protease A) (Deubiquitinating enzyme A) Length = 837 Score = 30.4 bits (67), Expect = 5.4 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = -1 Query: 586 IDKAADSSVPKKQLTGIYDLIAVLTHKGRSADSGHYVGWVKQDD 455 I ++ S P G Y+L+ ++H G + GHYV +K+++ Sbjct: 763 IPQSTTSLQPVSDGVGKYELLGFISHLGNNVTCGHYVCHIKKNN 806
>UBP10_HUMAN (Q14694) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)| (Ubiquitin thioesterase 10) (Ubiquitin-specific-processing protease 10) (Deubiquitinating enzyme 10) Length = 798 Score = 30.0 bits (66), Expect = 7.0 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 9/36 (25%) Frame = -1 Query: 535 YDLIAVLTHKGRSADSGHYV---------GWVKQDD 455 Y L AV+ H G SA GHY GW++ DD Sbjct: 732 YRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDD 767
>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)| (Ubiquitin thioesterase 42) (Ubiquitin-specific-processing protease 42) (Deubiquitinating enzyme 42) Length = 1325 Score = 30.0 bits (66), Expect = 7.0 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 Query: 538 IYDLIAVLTHKGRSADSGHYVGWVKQDDG 452 +Y L AVL H G + +GHY ++K +G Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNG 381
>UBPW_MOUSE (Q61068) Ubiquitin carboxyl-terminal hydrolase DUB-1 (EC 3.1.2.15)| (Ubiquitin thioesterase DUB-1) (Ubiquitin-specific processing protease DUB-1) (Deubiquitinating enzyme 1) Length = 526 Score = 30.0 bits (66), Expect = 7.0 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 8/39 (20%) Frame = -1 Query: 535 YDLIAVLTHKGRSADSGHYV--------GWVKQDDGQIS 443 Y L AVL H G ++ SGHY W K DD +++ Sbjct: 290 YALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVT 328
>UBP10_MOUSE (P52479) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)| (Ubiquitin thioesterase 10) (Ubiquitin-specific-processing protease 10) (Deubiquitinating enzyme 10) Length = 792 Score = 30.0 bits (66), Expect = 7.0 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 9/36 (25%) Frame = -1 Query: 535 YDLIAVLTHKGRSADSGHYV---------GWVKQDD 455 Y L AV+ H G SA GHY GW++ DD Sbjct: 726 YRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDD 761
>PTPA1_KLULA (Q6CYH1) Serine/threonine-protein phosphatase 2A activator 1 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1) (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl phosphatase activator 1) Length = 353 Score = 30.0 bits (66), Expect = 7.0 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +2 Query: 257 NTSFIKADISHVPVASTR*FQNLFLLSYAWVVVIKLNPFS 376 NTS I DIS+ + NLF S ++ V+K PFS Sbjct: 216 NTSLIPKDISNTRLMEQNSSSNLFCKSIRFINVVKSGPFS 255
>UBP3_ARATH (O24454) Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)| (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3) (AtUBP3) Length = 371 Score = 30.0 bits (66), Expect = 7.0 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 5/96 (5%) Frame = -1 Query: 535 YDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIEFD 356 Y L AV+ H G + GHYV VK + W+ FD Sbjct: 298 YSLFAVVVHVGSGPNHGHYVSLVKSHN---------------------------HWLFFD 330 Query: 355 DDNPSIRKEEEILKLSGGGDWHMA-----YICLYKA 263 D+N + +E + G + + YI Y++ Sbjct: 331 DENVEMIEESAVQTFFGSSQEYSSNTDHGYILFYES 366
>UBPX_CAEEL (P34547) Probable ubiquitin carboxyl-terminal hydrolase R10E11.3| (EC 3.1.2.15) (Ubiquitin thioesterase) (Ubiquitin-specific processing protease) (Deubiquitinating enzyme) Length = 410 Score = 30.0 bits (66), Expect = 7.0 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -1 Query: 538 IYDLIAVLTHKGRSADSGHYVGWVKQD 458 +YDL+A + H G + + GHY+ VK + Sbjct: 324 MYDLVATVVHCGATPNRGHYITLVKSN 350
>IMPA1_BOVIN (P20456) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP)| (Inositol-1(or 4)-monophosphatase) (Lithium-sensitive myo-inositol monophosphatase A1) Length = 277 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +3 Query: 519 TAIKS*IPVNCFFGTEESAALSMSMLDDSPALVDDP 626 T+IK P + F G E AA S+L D+P + DP Sbjct: 56 TSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDP 91
>DPOD1_ORYSA (Q9LRE6) DNA polymerase delta catalytic subunit (EC 2.7.7.7)| Length = 1105 Score = 29.6 bits (65), Expect = 9.1 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +1 Query: 286 PCASRLHQIISKSLPPFVCLGCRHQTQSIFLNGNKKLSIYCKAREYLIMCRT 441 P S + + K L CLGC+ ++ N+ L +CK RE + C+T Sbjct: 1000 PSNSGIMKFAKKQL---TCLGCK----AVISGSNQTLCFHCKGREAELYCKT 1044
>UBP20_HUMAN (Q9Y2K6) Ubiquitin carboxyl-terminal hydrolase 20 (EC 3.1.2.15)| (Ubiquitin thioesterase 20) (Ubiquitin-specific-processing protease 20) (Deubiquitinating enzyme 20) Length = 913 Score = 29.6 bits (65), Expect = 9.1 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = -1 Query: 535 YDLIAVLTHKGRSADSGHYVGWVKQDDGQIS*SYT*SDTLWPCNILIISCCHSGKWIEFD 356 YDL++V+ H G +A SGHY+ + + N++ +G+W EFD Sbjct: 626 YDLLSVICHHG-TAGSGHYIAYCQ-------------------NVI------NGQWYEFD 659 Query: 355 D 353 D Sbjct: 660 D 660 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,659,529 Number of Sequences: 219361 Number of extensions: 2081648 Number of successful extensions: 4249 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 4136 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4230 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6912958834 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
