ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2k23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLSB_SPIOL (Q43869) Glycerol-3-phosphate acyltransferase, chloro... 98 2e-20
2PLSB_PHAVU (Q43822) Glycerol-3-phosphate acyltransferase, chloro... 96 9e-20
3PLSB_PEA (P30706) Glycerol-3-phosphate acyltransferase, chloropl... 96 1e-19
4PLSB_ARATH (Q43307) Glycerol-3-phosphate acyltransferase, chloro... 95 2e-19
5PLSB_CARTI (Q42713) Glycerol-3-phosphate acyltransferase, chloro... 89 1e-17
6PLSB_CUCMO (P10349) Glycerol-3-phosphate acyltransferase, chloro... 86 9e-17
7PLSB_CUCSA (Q39639) Glycerol-3-phosphate acyltransferase, chloro... 86 1e-16
8YGL4_BACST (P32814) Hypothetical 35.5 kDa protein in gldA 3'regi... 33 0.91
9DPO1_MYCLE (P46835) DNA polymerase I (EC 2.7.7.7) (POL I) 30 5.9

>PLSB_SPIOL (Q43869) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 472

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 47/82 (57%), Positives = 63/82 (76%)
 Frame = -2

Query: 732 QIEKEIGEQRVISFHGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLK 553
           Q+EKEIGE+RV+SFHGVG+SV  EI Y DV+   +N +EA+  + +ALY+SV +QYNVLK
Sbjct: 389 QVEKEIGEKRVMSFHGVGVSVEPEINYNDVSLGCKNDEEAKSVYGQALYNSVNEQYNVLK 448

Query: 552 SAIFRDRGAVSSNPAISLSQPW 487
           +AI   +G+ +S P  SLSQPW
Sbjct: 449 AAIHGKQGSGASTPTTSLSQPW 470



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>PLSB_PHAVU (Q43822) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 461

 Score = 96.3 bits (238), Expect = 9e-20
 Identities = 44/83 (53%), Positives = 63/83 (75%)
 Frame = -2

Query: 732 QIEKEIGEQRVISFHGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLK 553
           ++EKEIGE+R+I FHG G+SVA  I + + TA  +N ++A+  FS+ALY+SV +QYNVLK
Sbjct: 379 KVEKEIGEKRIICFHGAGISVAPAISFSETTATCENPEKAKEVFSKALYNSVTEQYNVLK 438

Query: 552 SAIFRDRGAVSSNPAISLSQPWR 484
           SAI   +G  +S P ++LSQPW+
Sbjct: 439 SAIQGKKGFEASTPVVTLSQPWK 461



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>PLSB_PEA (P30706) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 457

 Score = 95.9 bits (237), Expect = 1e-19
 Identities = 42/83 (50%), Positives = 63/83 (75%)
 Frame = -2

Query: 732 QIEKEIGEQRVISFHGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLK 553
           ++EKEIGE+R+IS+HG G+S A EI + + TA  +N ++A+  +++ALY SV +QY+VLK
Sbjct: 375 KVEKEIGEKRIISYHGTGISTAPEISFSNTTAACENPEKAKDAYTKALYDSVTEQYDVLK 434

Query: 552 SAIFRDRGAVSSNPAISLSQPWR 484
           SAI   +G  +S P +SLSQPW+
Sbjct: 435 SAIHGKKGLQASTPVVSLSQPWK 457



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>PLSB_ARATH (Q43307) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 459

 Score = 95.1 bits (235), Expect = 2e-19
 Identities = 44/82 (53%), Positives = 60/82 (73%)
 Frame = -2

Query: 732 QIEKEIGEQRVISFHGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLK 553
           Q+EKEIGE+R++ FHG GLS+A EI + DVTA  ++ +EA+  +S+ALY SV +QY +L 
Sbjct: 377 QVEKEIGEKRLVGFHGTGLSIAPEINFSDVTADCESPNEAKEAYSQALYKSVNEQYEILN 436

Query: 552 SAIFRDRGAVSSNPAISLSQPW 487
           SAI   RG  +S   +SLSQPW
Sbjct: 437 SAIKHRRGVEASTSRVSLSQPW 458



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>PLSB_CARTI (Q42713) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 463

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 43/81 (53%), Positives = 59/81 (72%)
 Frame = -2

Query: 732 QIEKEIGEQRVISFHGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLK 553
           Q+EKEIGE+  ISFHG G+SVA EI + +VTA   + +EA+  +S+ALY SV +QY VL 
Sbjct: 378 QVEKEIGEKSWISFHGTGISVAPEINFQEVTASCGSPEEAKAAYSQALYDSVCEQYKVLH 437

Query: 552 SAIFRDRGAVSSNPAISLSQP 490
           SA+   +G  +S P++SLSQP
Sbjct: 438 SAVHGGKGLEASTPSVSLSQP 458



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>PLSB_CUCMO (P10349) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 396

 Score = 86.3 bits (212), Expect = 9e-17
 Identities = 43/82 (52%), Positives = 59/82 (71%)
 Frame = -2

Query: 732 QIEKEIGEQRVISFHGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLK 553
           Q+E EIGE+RVI+F+G GLSVA EI + ++ A  +N +E R  +S+AL+ SV  QYNVLK
Sbjct: 315 QVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLK 374

Query: 552 SAIFRDRGAVSSNPAISLSQPW 487
           +AI   +G  +S   +SLSQPW
Sbjct: 375 TAISGKQGLGASTADVSLSQPW 396



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>PLSB_CUCSA (Q39639) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 470

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 44/82 (53%), Positives = 56/82 (68%)
 Frame = -2

Query: 732 QIEKEIGEQRVISFHGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLK 553
           Q+E EIGE+RVISF+G GLSV  EI + ++ A   N DE R  +S+ALY SV  QYNVLK
Sbjct: 388 QVEIEIGEKRVISFNGTGLSVGPEISFDEIAASRDNPDEVREAYSKALYDSVAKQYNVLK 447

Query: 552 SAIFRDRGAVSSNPAISLSQPW 487
           +AI   +   +S   +SLSQPW
Sbjct: 448 AAIDGKQELEASVADVSLSQPW 469



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>YGL4_BACST (P32814) Hypothetical 35.5 kDa protein in gldA 3'region (ORF4)|
          Length = 301

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 22/71 (30%), Positives = 35/71 (49%)
 Frame = -2

Query: 723 KEIGEQRVISFHGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLKSAI 544
           +EIGE+RV  F   G  +++E+K  D   + +  D +   +       V  QY+ LKS  
Sbjct: 88  EEIGEERVAKFSNKGHLISDEVKLKDCFHKDEEDDWSNEEW-HGKDERVSFQYDRLKSVQ 146

Query: 543 FRDRGAVSSNP 511
           + +R   S NP
Sbjct: 147 YAERWWNSRNP 157



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>DPO1_MYCLE (P46835) DNA polymerase I (EC 2.7.7.7) (POL I)|
          Length = 911

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
 Frame = -2

Query: 687 GVGLSVAEE--IKYGDVTAQSQNADEARGNFSEALYSSVVDQY-NVLKSAIFRDRGAVSS 517
           GVG   A +  + YG +     N +  RG   EAL + +     N   + + +D   V +
Sbjct: 210 GVGEKTAAKWIVDYGSLQGLVDNVESVRGKVGEALRTHLASVVRNRELTELVKDVPLVQT 269

Query: 516 NPAISLSQPW---R*N*AFSGLDFSFLFDRADELL 421
           +  + L QPW   R +  F  L+F  L DR  E L
Sbjct: 270 SDTLRL-QPWDRDRIHRLFDNLEFRVLRDRLFEAL 303


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,766,602
Number of Sequences: 219361
Number of extensions: 2078092
Number of successful extensions: 4776
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4773
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7592921998
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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