ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2k22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HS74L_HUMAN (O95757) Heat shock 70 kDa protein 4L (Osmotic stres... 54 4e-07
2HS74L_MOUSE (P48722) Heat shock 70 kDa protein 4L (Osmotic stres... 53 8e-07
3HSP74_HUMAN (P34932) Heat shock 70 kDa protein 4 (Heat shock 70-... 40 0.006
4YLA4_CAEEL (Q05036) Hypothetical protein C30C11.4 in chromosome III 40 0.007
5HSP74_MOUSE (Q61316) Heat shock 70 kDa protein 4 (Heat shock 70-... 38 0.027
6HS105_RAT (Q66HA8) Heat-shock protein 105 kDa (Heat shock 110 kD... 38 0.036
7HSP97_STRFN (Q94738) 97 kDa heat shock protein (Heat shock prote... 37 0.061
8HSP97_STRPU (Q06068) 97 kDa heat shock protein (Egg sperm receptor) 37 0.061
9HS105_HUMAN (Q92598) Heat-shock protein 105 kDa (Heat shock 110 ... 36 0.14
10HS105_CRIGR (Q60446) Heat-shock protein 105 kDa (Heat shock 110 ... 36 0.14
11OXRP_RAT (Q63617) 150 kDa oxygen-regulated protein precursor (Or... 36 0.14
12HS105_PONPY (Q5R606) Heat-shock protein 105 kDa (Heat shock 110 ... 35 0.18
13HS105_MOUSE (Q61699) Heat-shock protein 105 kDa (Heat shock-rela... 35 0.23
14OXRP_HUMAN (Q9Y4L1) 150 kDa oxygen-regulated protein precursor (... 34 0.52
15OXRP_CRIGR (Q60432) 150 kDa oxygen-regulated protein precursor (... 33 0.88
16CLFB_STAAW (Q8NUL0) Clumping factor B precursor (Fibrinogen-bind... 32 2.6
17CLFB_STAAS (Q6G644) Clumping factor B precursor (Fibrinogen-bind... 32 2.6
18ENPL_MOUSE (P08113) Endoplasmin precursor (Heat shock protein 90... 31 3.3
19PTMS_HUMAN (P20962) Parathymosin 31 3.3
20PTMS_MOUSE (Q9D0J8) Parathymosin 31 4.4
21S6A15_BOVIN (Q9XS59) Orphan sodium- and chloride-dependent neuro... 30 5.7
22TOLA_ECOLI (P19934) Protein tolA 30 5.7
23HSP68_DROME (O97125) Heat shock protein 68 30 5.7
24ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUM... 30 5.7
25PTMS_RAT (P04550) Parathymosin (Zinc-binding 11.5 kDa protein) 30 5.7
26ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUM... 30 9.7
27PTMS_BOVIN (P08814) Parathymosin 30 9.7

>HS74L_HUMAN (O95757) Heat shock 70 kDa protein 4L (Osmotic stress protein 94)|
            (Heat shock 70-related protein APG-1)
          Length = 839

 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
 Frame = -3

Query: 717  HIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMX 538
            H+D +E +KV    SDA +WL  K   Q+ L    +PV+ VS+I  K++ LD FC PI+ 
Sbjct: 728  HLDPTEMEKVEKCISDAMSWLNSKMNAQNKLSLTQDPVVKVSEIVAKSKELDNFCNPIIY 787

Query: 537  XXXXXXXXXXXPLAETPSPEAYTPEEQ-------------SNGADESAEPASDGAQDEHV 397
                            P P+A  PE++              +G +  ++   D +Q    
Sbjct: 788  ---------------KPKPKAEVPEDKPKANSEHNGPMDGQSGTETKSDSTKDSSQHTKS 832

Query: 396  GEQMDTD 376
              +M+ D
Sbjct: 833  SGEMEVD 839



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>HS74L_MOUSE (P48722) Heat shock 70 kDa protein 4L (Osmotic stress protein 94)|
            (Heat shock 70-related protein APG-1)
          Length = 838

 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
 Frame = -3

Query: 717  HIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMX 538
            H+D +E ++V    SD+  WL  K   Q+ L    +PV+ VS+I  K++ LD FC PI+ 
Sbjct: 728  HLDPAEMERVEKYISDSMNWLNSKMNAQNKLSLTQDPVVKVSEIVTKSKELDNFCNPIVY 787

Query: 537  XXXXXXXXXXXPLAETPSPEAYT------PEEQSNGADESAEPASDGAQDEHVGEQMDTD 376
                          E P  +A T      P +  +G++ S +P    +Q    GE M+ D
Sbjct: 788  KPKPK--------VEAPEDKAKTGSEHNGPMDGQSGSETSPDPPKGSSQHTDSGE-MEVD 838



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>HSP74_HUMAN (P34932) Heat shock 70 kDa protein 4 (Heat shock 70-related protein|
            APG-2) (HSP70RY)
          Length = 840

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 26/121 (21%), Positives = 47/121 (38%)
 Frame = -3

Query: 717  HIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMX 538
            H+D ++  KV    ++A  W+  K   Q+      +PV+   +I+ K + L   C PI+ 
Sbjct: 725  HLDAADMTKVEKSTNEAMEWMNNKLNLQNKQSLTMDPVVKSKEIEAKIKELTSTCSPII- 783

Query: 537  XXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQ 358
                            P P+   P+E+   A+++      G        +  TD   PS 
Sbjct: 784  --------------SKPKPKVEPPKEEQKNAEQNGPVDGQGDNPGPQAAEQGTDTAVPSD 829

Query: 357  A 355
            +
Sbjct: 830  S 830



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>YLA4_CAEEL (Q05036) Hypothetical protein C30C11.4 in chromosome III|
          Length = 776

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = -3

Query: 717 HIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 541
           H+D  E +KV+N   D + WL E + +Q+   K   PV+   +I +     +    PI+
Sbjct: 684 HLDSKEMEKVINAIEDKKKWLDEARHKQETRSKTDAPVVFTEEILQNKNVFENVVNPIL 742



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>HSP74_MOUSE (Q61316) Heat shock 70 kDa protein 4 (Heat shock 70-related protein|
            APG-2)
          Length = 841

 Score = 38.1 bits (87), Expect = 0.027
 Identities = 25/119 (21%), Positives = 45/119 (37%)
 Frame = -3

Query: 717  HIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMX 538
            H+D ++  KV    ++A  W+  K   Q+      +PV+   +I+ K + L   C PI+ 
Sbjct: 726  HLDAADVTKVEKSTNEAMEWMNSKLNLQNKQSLTVDPVVKTKEIEAKIKELTSICSPII- 784

Query: 537  XXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPS 361
                            P P+   P+E+   A+++      G        +   D   PS
Sbjct: 785  --------------SKPKPKVEPPKEEPKHAEQNGPVDGQGDNPGSQAAEHGADTAVPS 829



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>HS105_RAT (Q66HA8) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)|
          Length = 858

 Score = 37.7 bits (86), Expect = 0.036
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = -3

Query: 717 HIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 541
           HID SE +KV    ++   W+      Q     H +PV+   +I  K + L+  C+P++
Sbjct: 743 HIDESEMKKVEKSVNEVMEWMNNVMNAQAKRSLHQDPVVRTHEISAKVKELNNVCEPVV 801



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>HSP97_STRFN (Q94738) 97 kDa heat shock protein (Heat shock protein 110)|
          Length = 886

 Score = 37.0 bits (84), Expect = 0.061
 Identities = 26/113 (23%), Positives = 43/113 (38%)
 Frame = -3

Query: 717  HIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMX 538
            HI+  E  KV     + E W   K   Q+    + +PV+    I+ + +++   C PI+ 
Sbjct: 759  HIEKDEMAKVEKCLKEKEAWRDSKTSAQNQKAAYQDPVVTAQQIRSEIQSMKFICDPIIN 818

Query: 537  XXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDT 379
                          E P     TP E +   D    P ++G +    G+Q  T
Sbjct: 819  KPKPKPK------EEPPKDNGPTPAEAAK--DGGPAPTTEGEEKMDTGDQAPT 863



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>HSP97_STRPU (Q06068) 97 kDa heat shock protein (Egg sperm receptor)|
          Length = 889

 Score = 37.0 bits (84), Expect = 0.061
 Identities = 28/119 (23%), Positives = 47/119 (39%)
 Frame = -3

Query: 717  HIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMX 538
            HI+  +  KV     +   W   K   Q+    H +PV+  + I+ + +++   C PI+ 
Sbjct: 760  HIEKEDMAKVEKCVKEKVAWRDSKVNAQNQKAPHQDPVVTAAQIRSEIQSMKFVCDPIIN 819

Query: 537  XXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPS 361
                          E P     TPEE +      A P ++G +     E+MDT    P+
Sbjct: 820  KPKPKPK------EEPPKDNGPTPEEAAKDGG-PAPPTTEGGE-----EKMDTSDQAPT 866



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>HS105_HUMAN (Q92598) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)|
           (Antigen NY-CO-25)
          Length = 858

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = -3

Query: 717 HIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 541
           HID SE +KV    ++   W+      Q       +PV+   +IK K + L+  C+P++
Sbjct: 742 HIDESEMKKVEKSVNEVMEWMNNVMNAQAKKSLDQDPVVRAQEIKTKIKELNNTCEPVV 800



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>HS105_CRIGR (Q60446) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)|
          Length = 858

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 26/116 (22%), Positives = 44/116 (37%)
 Frame = -3

Query: 717  HIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMX 538
            HID SE +KV    ++   W+      Q       +PV+   +I+ K + L+  C+P++ 
Sbjct: 743  HIDESEMKKVEKSVNEVMEWMNNVMNAQAKRSLDQDPVVRTHEIRAKVKELNNVCEPVV- 801

Query: 537  XXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKD 370
                        L  TP+      +E   G D     A     + H  E+   + D
Sbjct: 802  -NQPKPKIESPKLERTPNGPNLDKKEDLEGKDNFGAEAPHQNGECHPNEKGSVNMD 856



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>OXRP_RAT (Q63617) 150 kDa oxygen-regulated protein precursor (Orp150) (Hypoxia|
            up-regulated 1)
          Length = 999

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 30/106 (28%), Positives = 46/106 (43%)
 Frame = -3

Query: 714  IDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXX 535
            ++++  +KV+N   D  TW      +Q  LP    PVLL  DI+ K  ALDR  + ++  
Sbjct: 852  VEMTTLEKVIN---DTWTWKNATLAEQAKLPATEKPVLLSKDIEAKMMALDREVQYLLNK 908

Query: 534  XXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHV 397
                           P P    P++++    E    AS G Q+E V
Sbjct: 909  AKFT----------KPRPR---PKDKNGTRTEPPLNASAGDQEEKV 941



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>HS105_PONPY (Q5R606) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)|
          Length = 858

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = -3

Query: 717 HIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 541
           HID SE +KV    ++   W+      Q       +PV+   +IK K + L+  C+P++
Sbjct: 742 HIDESEMKKVEKSVNEVMEWMNNVMNAQAKESLDQDPVVRAQEIKTKIKELNNTCEPVV 800



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>HS105_MOUSE (Q61699) Heat-shock protein 105 kDa (Heat shock-related 100 kDa|
           protein E7I) (HSP-E7I) (Heat shock 110 kDa protein) (42
           degrees C-HSP)
          Length = 858

 Score = 35.0 bits (79), Expect = 0.23
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = -3

Query: 717 HIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 541
           HID SE +KV    ++   W+      Q       +PV+   +I+ K + L+  C+P++
Sbjct: 743 HIDESEMKKVEKSVNEVMEWMNNVMNAQAKRSLDQDPVVRTHEIRAKVKELNNVCEPVV 801



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>OXRP_HUMAN (Q9Y4L1) 150 kDa oxygen-regulated protein precursor (Orp150) (Hypoxia|
            up-regulated 1)
          Length = 999

 Score = 33.9 bits (76), Expect = 0.52
 Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 9/122 (7%)
 Frame = -3

Query: 714  IDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXX 535
            ++++  +KV+NE      W      +Q  LP    PVLL  DI+ K  ALDR  + ++  
Sbjct: 852  VEMTTLEKVINE---TWAWKNATLAEQAKLPATEKPVLLSKDIEAKMMALDREVQYLLNK 908

Query: 534  XXXXX-----XXXXXPLAETPSPEAYTPEEQS----NGADESAEPASDGAQDEHVGEQMD 382
                             AE P   + + + +      G  E AEP S+  + E   E  D
Sbjct: 909  AKFTKPRPRPKDKNGTRAEPPLNASASDQGEKVIPPAGQTEDAEPISEPEKVETGSEPGD 968

Query: 381  TD 376
            T+
Sbjct: 969  TE 970



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>OXRP_CRIGR (Q60432) 150 kDa oxygen-regulated protein precursor (Orp150)|
           (Hypoxia up-regulated 1) (170 kDa glucose-regulated
           protein)
          Length = 999

 Score = 33.1 bits (74), Expect = 0.88
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -3

Query: 714 IDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDR 559
           ++++  +KV+N   D   W      +Q  LP    PVLL  DI+ K  ALDR
Sbjct: 852 VEMTTLEKVIN---DTWAWKNATLAEQAKLPATEKPVLLSKDIEAKMMALDR 900



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>CLFB_STAAW (Q8NUL0) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 907

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -3

Query: 492 TPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA 355
           +P P+  +  +  +G+D  ++  SD   D   G   D+D D  S++
Sbjct: 579 SPDPDPDSDSDSDSGSDSDSDSDSDSDSDSDSGSDSDSDSDSDSES 624



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>CLFB_STAAS (Q6G644) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 905

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -3

Query: 492 TPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA 355
           +P P+  +  +  +G+D  ++  SD   D   G   D+D D  S++
Sbjct: 579 SPDPDPDSDSDSDSGSDSDSDSDSDSDSDSDSGSDSDSDSDSDSES 624



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>ENPL_MOUSE (P08113) Endoplasmin precursor (Heat shock protein 90 kDa beta|
           member 1) (94 kDa glucose-regulated protein) (GRP94)
           (ERP99) (Polymorphic tumor rejection antigen 1) (Tumor
           rejection antigen gp96)
          Length = 802

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 483 PEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQ 358
           PEA   EE     ++++E A D  QDE  GE+MD   ++  +
Sbjct: 751 PEAQVEEEPEEEPEDTSEDAEDSEQDE--GEEMDAGTEEEEE 790



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>PTMS_HUMAN (P20962) Parathymosin|
          Length = 101

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = -3

Query: 465 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 367
           EE+ NGA+E  E  ++  ++E  GE+ D ++++
Sbjct: 38  EEEENGAEEEEEETAEDGEEEDEGEEEDEEEEE 70



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>PTMS_MOUSE (Q9D0J8) Parathymosin|
          Length = 100

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = -3

Query: 465 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQ 358
           EE+ NGA+E  E  ++  +D+  G++ D ++++  +
Sbjct: 38  EEEENGAEEEEEETAEDGEDDDEGDEEDEEEEEEDE 73



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>S6A15_BOVIN (Q9XS59) Orphan sodium- and chloride-dependent neurotransmitter|
           transporter NTT73 (Orphan transporter v7-3) (Solute
           carrier family 6 member 15)
          Length = 729

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 23/70 (32%), Positives = 34/70 (48%)
 Frame = +1

Query: 379 GVHLLTHMLILSTVASWFSRLICSI*LFFWCISLG*WGFC*RRGLWFWRWPWFGHDGFAE 558
           G +LL ++++L         L+  I LFF  +S+G        G+W +  P  G  GFA 
Sbjct: 97  GAYLLPYLILL---------LVIGIPLFFLELSVGQRIRRGSIGVWNYISPQLGGIGFAS 147

Query: 559 PVKCFSLLLY 588
            V CF + LY
Sbjct: 148 CVVCFFVALY 157



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>TOLA_ECOLI (P19934) Protein tolA|
          Length = 421

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 27/109 (24%), Positives = 38/109 (34%)
 Frame = -3

Query: 699 KQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXXXXXXX 520
           KQK   E +       + K + DA           +D KKKAEA     K          
Sbjct: 130 KQKQAEEAAAKAAADAKAKAEADAKAAEEAAKKAAADAKKKAEA--EAAKAAAEAQKKAE 187

Query: 519 XXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDK 373
                   +  + EA   E +   A E+AE A   A+ +   E+   DK
Sbjct: 188 AAAAALKKKAEAAEAAAAEARKKAATEAAEKAKAEAEKKAAAEKAAADK 236



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>HSP68_DROME (O97125) Heat shock protein 68|
          Length = 635

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = -3

Query: 714 IDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 541
           I  ++K  +V  CS+A  WL             +N      + + K + L++FC PIM
Sbjct: 558 ISAADKSSIVERCSEAMKWL------------DSNTTAEKEEYEYKLKELEQFCSPIM 603



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>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating|
           enzyme subunit 2) (Anthracycline-associated resistance
           ARX)
          Length = 638

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
 Frame = -3

Query: 486 SPEAYTPEEQ-------SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 343
           SPE   P++        +NG+D+ A+P++  AQ++     +D+D++ PS + + S
Sbjct: 548 SPEKVGPKQAEDAAKSIANGSDDGAQPSTSTAQEQDDVLIVDSDEEGPSNSTDCS 602



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>PTMS_RAT (P04550) Parathymosin (Zinc-binding 11.5 kDa protein)|
          Length = 101

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = -3

Query: 465 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 367
           EE+ NGA+E  E  ++  +D+  G++ D ++++
Sbjct: 38  EEEENGAEEEEEETAEDGEDDDEGDEEDEEEEE 70



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>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating|
           enzyme subunit 2) (Anthracycline-associated resistance
           ARX)
          Length = 640

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -3

Query: 456 SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 343
           +NG+D+ A+P++  AQ++     +D+D++D S   +VS
Sbjct: 567 TNGSDDGAQPSTSTAQEQDDVLIVDSDEEDSSNNADVS 604



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>PTMS_BOVIN (P08814) Parathymosin|
          Length = 101

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = -3

Query: 465 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 367
           EE+ NGA+E  E  ++  ++E  G++ D ++++
Sbjct: 38  EEEENGAEEEEEETAEDGEEEDDGDEEDEEEEE 70


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,820,478
Number of Sequences: 219361
Number of extensions: 2046722
Number of successful extensions: 6123
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6104
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7366267610
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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