| Clone Name | rbaal2k06 |
|---|---|
| Clone Library Name | barley_pub |
>ENTK_MOUSE (P97435) Enteropeptidase (EC 3.4.21.9) (Enterokinase) [Contains:| Enteropeptidase non-catalytic heavy chain; Enteropeptidase catalytic light chain] Length = 1069 Score = 32.3 bits (72), Expect = 0.66 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = -3 Query: 202 ITSLLHLSRSIERNIDQSPVTCTIWKIMGCPCQFGRLLSPLRKNQALALH-DSNLSTVLR 26 + +L H RS +R + + + + W + C + R L P R L LH SNL++ Sbjct: 844 VVALYHRDRSTDRLLCGASLVSSDWLVSAAHCVYRRNLDPTRWTAVLGLHMQSNLTSPQV 903 Query: 25 VR 20 VR Sbjct: 904 VR 905
>ATCU_VIBCH (Q9KPZ7) Copper-transporting P-type ATPase (EC 3.6.3.4)| Length = 915 Score = 30.8 bits (68), Expect = 1.9 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%) Frame = -3 Query: 235 QRTVVSS**ACITSLLHLSRSIERNIDQSPVTCTIWKIMGCPC-------QFGRLLSPLR 77 Q T+++S + S + LS++ RN+ Q+ I+ +G P FG LLSP+ Sbjct: 825 QMTLLNSSPTSVVSAIELSKATLRNMKQNLFGAFIYNTLGIPIAAGVLYPAFGFLLSPVV 884 Query: 76 KNQALAL 56 A+AL Sbjct: 885 AGAAMAL 891
>SMC5_SCHPO (O13710) Structural maintenance of chromosome 5 (DNA repair protein| spr18) (SMC partner of rad18) Length = 1065 Score = 30.0 bits (66), Expect = 3.3 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 4/54 (7%) Frame = -1 Query: 456 EXKIRL*NLRSFISMLREHCRKVQIRELNAGHAPHD----EVPDEVNSLLSEWM 307 E K++ N+ S++ M + RK +I EL + + D E+ DE+NS+ +W+ Sbjct: 843 ETKLKFMNVNSYV-MEQYDARKKEIEELESKMSDFDQSVEELQDEMNSIKEDWV 895
>SYL_BURMA (Q62H20) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 864 Score = 30.0 bits (66), Expect = 3.3 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = -3 Query: 145 VTCTIWKIMGCPCQFGRLL-SPLRKNQALALHDSNLSTVLRVRSDI 11 VT +WK++G +FG LL +P K AL + + VL+V + Sbjct: 770 VTFELWKVLGYADEFGPLLDAPWPKVDEAALEQAEIELVLQVNGKV 815
>Y290_HAEIN (P77868) Probable cation-transporting ATPase HI0290 (EC 3.6.3.-)| Length = 722 Score = 28.9 bits (63), Expect = 7.3 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -3 Query: 202 ITSLLHLSRSIERNIDQSPVTCTIWKIMGCPCQFGRLLSPLRKNQALALHD-SNLSTVLR 26 + L ++R+ +NI Q+ I+ I+G P LSP+ A+AL S L LR Sbjct: 657 LVDALFIARATLKNIKQNLFFALIYNILGIPLAAFGFLSPIIAGAAMALSSISVLMNALR 716 Query: 25 VR 20 ++ Sbjct: 717 LK 718
>TETX_CLOTE (P04958) Tetanus toxin precursor (EC 3.4.24.68) (Tentoxylysin)| [Contains: Tetanus toxin light chain (Tetanus toxin chain L); Tetanus toxin heavy chain (Tetanus toxin chain H)] Length = 1314 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 7/81 (8%) Frame = +3 Query: 39 ERLLSWSANAWFFL---NGERRRPN*QGHPMIFQMVQVTGDWSIFR----SMDLDKCNND 197 ++ ++ AN W F+ N N + ++ ++TG +I ++ LD+CNN+ Sbjct: 1020 DKFNAYLANKWVFITITNDRLSSANLYINGVLMGSAEITGLGAIREDNNITLKLDRCNNN 1079 Query: 198 VMHAHHDETTVRCRGRRPSKL 260 + D+ + C+ P ++ Sbjct: 1080 NQYVSIDKFRIFCKALNPKEI 1100
>AOCX_BOVIN (Q29437) Copper amine oxidase, liver isozyme precursor (EC 1.4.3.6)| (Amine oxidase [copper-containing]) (Serum amine oxidase) (SAO) Length = 762 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Frame = +3 Query: 213 HDETTVRCRGRRPSKLPWTSPKLA*V-QSCSFSSIQTVRSSLHQEL 347 H RC R PS PWT P + + S + TV S L Q+L Sbjct: 33 HPSLPPRCPSRSPSDQPWTHPDQSQLFADLSREELTTVMSFLTQQL 78
>SYL_BURPS (Q63QT6) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 864 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -3 Query: 145 VTCTIWKIMGCPCQFGRLL-SPLRKNQALALHDSNLSTVLRVRSDI 11 VT +WK +G +FG LL +P K AL + + VL+V + Sbjct: 770 VTFELWKALGYADEFGPLLDAPWPKVDEAALEQAEIELVLQVNGKV 815 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,205,593 Number of Sequences: 219361 Number of extensions: 1371764 Number of successful extensions: 3537 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3429 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3534 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)