Clone Name	rbaal2k06
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK069946.1| Oryza sativa (japonica cultivar-group) cDNA clon...	139	9e-30
2	gb|AY105083.1| Zea mays PCO082395 mRNA sequence	84	5e-13
3	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	82	2e-12
4	dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic D...	82	2e-12
5	dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic D...	82	2e-12
6	dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic D...	44	0.42
7	gb|AC018483.11| Drosophila melanogaster clone BACR11B22, complet...	42	1.6
8	gb|AC096577.3| Homo sapiens BAC clone RP11-556I14 from 4, comple...	42	1.6
9	gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, r...	42	1.6
10	gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 ...	42	1.6
11	gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 ...	42	1.6
12	gb|CP000223.1| Drosophila melanogaster genomic scaffold 21100002...	42	1.6
13	gb|CP000191.1| Drosophila melanogaster genomic scaffold 21100002...	42	1.6
14	gb|CP000189.1| Drosophila melanogaster genomic scaffold 21100002...	42	1.6
15	ref|XM_529075.1| PREDICTED: Pan troglodytes similar to tyrosine ...	40	6.5
16	ref|XM_418578.1| PREDICTED: Gallus gallus similar to KIAA1462 pr...	40	6.5
17	ref|XM_712415.1| Candida albicans SC5314 hypothetical protein (C...	40	6.5
18	ref|XM_712321.1| Candida albicans SC5314 hypothetical protein (C...	40	6.5
19	ref|NM_024885.2| Homo sapiens TAF7-like RNA polymerase II, TATA ...	40	6.5
20	gb|AC103411.8| Rattus norvegicus 15 BAC CH230-7J23 (Children's H...	40	6.5
21	gb|AC126933.3| Mus musculus BAC clone RP24-117M7 from chromosome...	40	6.5
22	emb|AL359835.10| Human DNA sequence from clone RP11-191J5 on chr...	40	6.5
23	emb|AL109801.14|HSJ738A13 Human DNA sequence from clone RP4-738A...	40	6.5
24	emb|AL078595.12|HSDJ399J4 Human DNA sequence from clone RP3-399J...	40	6.5
25	emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome	40	6.5
26	gb|BC043391.1| Homo sapiens TAF7-like RNA polymerase II, TATA bo...	40	6.5
27	emb|BX664713.6| Zebrafish DNA sequence from clone DKEY-27N8 in l...	40	6.5
28	gb|AC007110.3| Homo sapiens chromosome 6, clone hRPK.472_J_18, c...	40	6.5
29	emb|BX537317.7| Zebrafish DNA sequence from clone DKEY-148L4 in ...	40	6.5
30	emb|CR407354.1| Gallus gallus finished cDNA, clone ChEST811h17	40	6.5
31	emb|CR405765.1| Gallus gallus finished cDNA, clone ChEST887p14	40	6.5
32	emb|CR405729.1| Gallus gallus finished cDNA, clone ChEST884l12	40	6.5
33	emb|BX933114.2| Gallus gallus finished cDNA, clone ChEST41l16	40	6.5
34	gb|AF285595.1|AF285595 Homo sapiens TBP-associated factor II Q (...	40	6.5
35	gb|AC007904.6|AC007904 Drosophila melanogaster, chromosome 3R, r...	40	6.5
36	dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome	40	6.5
37	dbj|AK026810.1| Homo sapiens cDNA: FLJ23157 fis, clone LNG09620	40	6.5
38	gb|AE003703.3| Drosophila melanogaster chromosome 3R, section 41...	40	6.5
39	emb|AL591973.1| Listeria monocytogenes strain EGD, complete geno...	40	6.5
40	gb|AC132400.3| Mus musculus BAC clone RP23-400A19 from 1, comple...	40	6.5
41	gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete ge...	40	6.5

---

>dbj|AK069946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035A19, full
            insert sequence
          Length = 2508

 Score =  139 bits (70), Expect = 9e-30
 Identities = 142/165 (86%), Gaps = 1/165 (0%)
 Strand = Plus / Minus

                                                                        
Query: 308  atccattcagacagtaaggagttcacttcatcaggaacttcatcgtgcggagcatgacct 367
            ||||||||  |||| ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 2132 atccattcgcacagcaaggagttcacttcatcaggaacttcatcatgtggagcatgacct 2073

                                                                        
Query: 368  gcatttaactccctaatctggaccttcctgcaatgctctctaagcatcgaaatgaatgac 427
            |||| || ||| ||||| |||||||| ||||||||||| |||||||| ||||  ||||| 
Sbjct: 2072 gcatctagctctctaatatggaccttgctgcaatgctccctaagcatggaaacaaatga- 2014

                                                         
Query: 428  ctcagattttacaagcggatctttnattccctgaataactaagat 472
            ||  ||||||  ||| |||||||| |||||||||| || ||||||
Sbjct: 2013 cttggattttgtaagtggatctttcattccctgaacaattaagat 1969

---

>gb|AY105083.1| Zea mays PCO082395 mRNA sequence
          Length = 647

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 123/149 (82%), Gaps = 1/149 (0%)
 Strand = Plus / Minus

                                                                       
Query: 332 acttcatcaggaacttcatcgtgcggagcatgacctgcatttaactccctaatctggacc 391
           |||||||| ||||||||||| || ||||||||||||||||||||||| || || || |||
Sbjct: 472 acttcatctggaacttcatcatgtggagcatgacctgcatttaactctctgatttgaacc 413

                                                                       
Query: 392 ttcctgcaatgctctctaagcatcgaaatgaatgacctcagattttacaagcggatcttt 451
           || |||||||| ||||  ||||| |  |  |||| |||||||||||  ||| || |||||
Sbjct: 412 ttgctgcaatgttctcggagcatggtgacaaatg-cctcagattttgtaagggggtcttt 354

                                        
Query: 452 nattccctgaataactaagatgttccctc 480
            || ||||| |||||||| || |||||||
Sbjct: 353 cataccctggataactaatatcttccctc 325

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                            
Query: 308      atccattcagacagtaaggagttcacttcatcaggaacttcatcgtgcggagcatgacct 367
                ||||||||  |||| ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 20601532 atccattcgcacagcaaggagttcacttcatcaggaacttcatcatgtggagcatgacct 20601473

                 
Query: 368      g 368
                |
Sbjct: 20601472 g 20601472



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 80/96 (83%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                            
Query: 364      acctgcatttaactccctaatctggaccttcctgcaatgctctctaagcatcgaaatgaa 423
                |||||||| || ||| ||||| |||||||| ||||||||||| |||||||| ||||  ||
Sbjct: 20601370 acctgcatctagctctctaatatggaccttgctgcaatgctccctaagcatggaaacaaa 20601311

                                                    
Query: 424      tgacctcagattttacaagcggatctttnattccct 459
                ||| ||  ||||||  ||| |||||||| |||||||
Sbjct: 20601310 tga-cttggattttgtaagtggatctttcattccct 20601276



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 44       gttgctgtcgtggagtgctaatgctt 69
                ||||||||| ||||||||||||||||
Sbjct: 20607366 gttgctgtcatggagtgctaatgctt 20607341

---

>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1254_E07
          Length = 124028

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                          
Query: 308    atccattcagacagtaaggagttcacttcatcaggaacttcatcgtgcggagcatgacct 367
              ||||||||  |||| ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 119179 atccattcgcacagcaaggagttcacttcatcaggaacttcatcatgtggagcatgacct 119120

               
Query: 368    g 368
              |
Sbjct: 119119 g 119119



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 80/96 (83%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                          
Query: 364    acctgcatttaactccctaatctggaccttcctgcaatgctctctaagcatcgaaatgaa 423
              |||||||| || ||| ||||| |||||||| ||||||||||| |||||||| ||||  ||
Sbjct: 119017 acctgcatctagctctctaatatggaccttgctgcaatgctccctaagcatggaaacaaa 118958

                                                  
Query: 424    tgacctcagattttacaagcggatctttnattccct 459
              ||| ||  ||||||  ||| |||||||| |||||||
Sbjct: 118957 tga-cttggattttgtaagtggatctttcattccct 118923

---

>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0515E01
          Length = 140063

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                         
Query: 308   atccattcagacagtaaggagttcacttcatcaggaacttcatcgtgcggagcatgacct 367
             ||||||||  |||| ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 67190 atccattcgcacagcaaggagttcacttcatcaggaacttcatcatgtggagcatgacct 67131

              
Query: 368   g 368
             |
Sbjct: 67130 g 67130



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 80/96 (83%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                         
Query: 364   acctgcatttaactccctaatctggaccttcctgcaatgctctctaagcatcgaaatgaa 423
             |||||||| || ||| ||||| |||||||| ||||||||||| |||||||| ||||  ||
Sbjct: 67028 acctgcatctagctctctaatatggaccttgctgcaatgctccctaagcatggaaacaaa 66969

                                                 
Query: 424   tgacctcagattttacaagcggatctttnattccct 459
             ||| ||  ||||||  ||| |||||||| |||||||
Sbjct: 66968 tga-cttggattttgtaagtggatctttcattccct 66934



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 44    gttgctgtcgtggagtgctaatgctt 69
             ||||||||| ||||||||||||||||
Sbjct: 73024 gttgctgtcatggagtgctaatgctt 72999

---

>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
           BAC clone:OJ1112_E07
          Length = 132055

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 44  gttgctgtcgtggagtgctaatgctt 69
           ||||||||| ||||||||||||||||
Sbjct: 977 gttgctgtcatggagtgctaatgctt 952

---

>gb|AC018483.11| Drosophila melanogaster clone BACR11B22, complete sequence
          Length = 176595

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 328   gttcacttcatcaggaacttc 348
             |||||||||||||||||||||
Sbjct: 58304 gttcacttcatcaggaacttc 58324

---

>gb|AC096577.3| Homo sapiens BAC clone RP11-556I14 from 4, complete sequence
          Length = 156095

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/32 (93%), Gaps = 2/32 (6%)
 Strand = Plus / Minus

                                              
Query: 289    ttcagtcttgttcgttttcatccattcagaca 320
              ||||||||||||  ||||||||||||||||||
Sbjct: 128960 ttcagtcttgtt--ttttcatccattcagaca 128931

---

>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone
              BACR10M08, complete sequence
          Length = 180213

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 328    gttcacttcatcaggaacttc 348
              |||||||||||||||||||||
Sbjct: 138157 gttcacttcatcaggaacttc 138177

---

>gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 of 73 of the complete
              sequence
          Length = 585533

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 328    gttcacttcatcaggaacttc 348
              |||||||||||||||||||||
Sbjct: 486812 gttcacttcatcaggaacttc 486792

---

>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
              sequence
          Length = 346474

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 328    gttcacttcatcaggaacttc 348
              |||||||||||||||||||||
Sbjct: 243923 gttcacttcatcaggaacttc 243943

---

>gb|CP000223.1| Drosophila melanogaster genomic scaffold 211000022280790
          Length = 626829

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 328   gttcacttcatcaggaacttc 348
             |||||||||||||||||||||
Sbjct: 67567 gttcacttcatcaggaacttc 67587

---

>gb|CP000191.1| Drosophila melanogaster genomic scaffold 211000022280172
          Length = 132906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 328   gttcacttcatcaggaacttc 348
             |||||||||||||||||||||
Sbjct: 92348 gttcacttcatcaggaacttc 92328

---

>gb|CP000189.1| Drosophila melanogaster genomic scaffold 211000022280229
          Length = 169547

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 328    gttcacttcatcaggaacttc 348
              |||||||||||||||||||||
Sbjct: 127238 gttcacttcatcaggaacttc 127258

---

>ref|XM_529075.1| PREDICTED: Pan troglodytes similar to tyrosine kinase (LOC473702),
            mRNA
          Length = 2673

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  acttcatcaggaacttcatc 351
            ||||||||||||||||||||
Sbjct: 2096 acttcatcaggaacttcatc 2077

---

>ref|XM_418578.1| PREDICTED: Gallus gallus similar to KIAA1462 protein (LOC420476),
            mRNA
          Length = 4356

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 417  aaatgaatgacctcagattt 436
            ||||||||||||||||||||
Sbjct: 2015 aaatgaatgacctcagattt 2034

---

>ref|XM_712415.1| Candida albicans SC5314 hypothetical protein (CaO19_8186), mRNA
          Length = 1659

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 180 gataaatgcaataatgatgtaatg 203
           ||||||||||||||||||| ||||
Sbjct: 236 gataaatgcaataatgatggaatg 213

---

>ref|XM_712321.1| Candida albicans SC5314 hypothetical protein (CaO19_551), mRNA
          Length = 1659

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 180 gataaatgcaataatgatgtaatg 203
           ||||||||||||||||||| ||||
Sbjct: 236 gataaatgcaataatgatggaatg 213

---

>ref|NM_024885.2| Homo sapiens TAF7-like RNA polymerase II, TATA box binding protein
           (TBP)-associated factor, 50kDa (TAF7L), mRNA
          Length = 2357

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 acttcatcaggaacttcatc 351
           ||||||||||||||||||||
Sbjct: 305 acttcatcaggaacttcatc 286

---

>gb|AC103411.8| Rattus norvegicus 15 BAC CH230-7J23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 216935

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    acagtggagaggttgctgtc 52
             ||||||||||||||||||||
Sbjct: 23112 acagtggagaggttgctgtc 23131

---

>gb|AC126933.3| Mus musculus BAC clone RP24-117M7 from chromosome 1, complete sequence
          Length = 170885

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    taatgatgtaatgcatgctc 210
              ||||||||||||||||||||
Sbjct: 158629 taatgatgtaatgcatgctc 158648

---

>emb|AL359835.10| Human DNA sequence from clone RP11-191J5 on chromosome 1q31.1-31.3
              Contains STSs and GSSs, complete sequence
          Length = 172747

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 391    cttcctgcaatgctctctaa 410
              ||||||||||||||||||||
Sbjct: 104355 cttcctgcaatgctctctaa 104374

---

>emb|AL109801.14|HSJ738A13 Human DNA sequence from clone RP4-738A13 on chromosome Xq21.31-22.1
             Contains the 5' end of the TAF7L gene for TAF7-like RNA
             polymerase II 50kDa TATA box binding protein
             (TBP)-associated factor and a CpG island, complete
             sequence
          Length = 46775

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   acttcatcaggaacttcatc 351
             ||||||||||||||||||||
Sbjct: 15960 acttcatcaggaacttcatc 15979

---

>emb|AL078595.12|HSDJ399J4 Human DNA sequence from clone RP3-399J4 on chromosome 6q15-16.3 Contains
              a cytochrome B pseudogene and a ribosomal protein (RPL7A)
              pseudogene, complete sequence
          Length = 124280

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    ttttcatccattcagacagt 322
              ||||||||||||||||||||
Sbjct: 123418 ttttcatccattcagacagt 123437

---

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     tgatatcactccggactcta 29
              ||||||||||||||||||||
Sbjct: 457500 tgatatcactccggactcta 457481

---

>gb|BC043391.1| Homo sapiens TAF7-like RNA polymerase II, TATA box binding protein
           (TBP)-associated factor, 50kDa, mRNA (cDNA clone
           MGC:50682 IMAGE:6154641), complete cds
          Length = 2357

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 acttcatcaggaacttcatc 351
           ||||||||||||||||||||
Sbjct: 305 acttcatcaggaacttcatc 286

---

>emb|BX664713.6| Zebrafish DNA sequence from clone DKEY-27N8 in linkage group 8,
             complete sequence
          Length = 126218

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   cttgttcgttttcatccatt 314
             ||||||||||||||||||||
Sbjct: 72721 cttgttcgttttcatccatt 72702

---

>gb|AC007110.3| Homo sapiens chromosome 6, clone hRPK.472_J_18, complete sequence
          Length = 148336

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   ttttcatccattcagacagt 322
             ||||||||||||||||||||
Sbjct: 84692 ttttcatccattcagacagt 84673

---

>emb|BX537317.7| Zebrafish DNA sequence from clone DKEY-148L4 in linkage group 8,
             complete sequence
          Length = 191141

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   cttgttcgttttcatccatt 314
             ||||||||||||||||||||
Sbjct: 32668 cttgttcgttttcatccatt 32687

---

>emb|CR407354.1| Gallus gallus finished cDNA, clone ChEST811h17
          Length = 1073

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 417  aaatgaatgacctcagattt 436
            ||||||||||||||||||||
Sbjct: 1043 aaatgaatgacctcagattt 1062

---

>emb|CR405765.1| Gallus gallus finished cDNA, clone ChEST887p14
          Length = 905

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 417 aaatgaatgacctcagattt 436
           ||||||||||||||||||||
Sbjct: 875 aaatgaatgacctcagattt 894

---

>emb|CR405729.1| Gallus gallus finished cDNA, clone ChEST884l12
          Length = 886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 417 aaatgaatgacctcagattt 436
           ||||||||||||||||||||
Sbjct: 856 aaatgaatgacctcagattt 875

---

>emb|BX933114.2| Gallus gallus finished cDNA, clone ChEST41l16
          Length = 2235

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 417 aaatgaatgacctcagattt 436
           ||||||||||||||||||||
Sbjct: 856 aaatgaatgacctcagattt 875

---

>gb|AF285595.1|AF285595 Homo sapiens TBP-associated factor II Q (TAF2Q) mRNA, complete cds
          Length = 1576

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 acttcatcaggaacttcatc 351
           ||||||||||||||||||||
Sbjct: 153 acttcatcaggaacttcatc 134

---

>gb|AC007904.6|AC007904 Drosophila melanogaster, chromosome 3R, region 88B-88B, BAC clone
              BACR01H04, complete sequence
          Length = 190325

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    tcgataaatgcaataatgat 197
              ||||||||||||||||||||
Sbjct: 128586 tcgataaatgcaataatgat 128567

---

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     tgatatcactccggactcta 29
              ||||||||||||||||||||
Sbjct: 510928 tgatatcactccggactcta 510909

---

>dbj|AK026810.1| Homo sapiens cDNA: FLJ23157 fis, clone LNG09620
          Length = 2144

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 acttcatcaggaacttcatc 351
           ||||||||||||||||||||
Sbjct: 297 acttcatcaggaacttcatc 278

---

>gb|AE003703.3| Drosophila melanogaster chromosome 3R, section 41 of 118 of the complete
              sequence
          Length = 223948

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    tcgataaatgcaataatgat 197
              ||||||||||||||||||||
Sbjct: 212207 tcgataaatgcaataatgat 212188

---

>emb|AL591973.1| Listeria monocytogenes strain EGD, complete genome, segment 1/12
          Length = 200050

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 30    agaacagtggagaggttgctgtcg 53
             |||| |||||||||||||||||||
Sbjct: 98784 agaaaagtggagaggttgctgtcg 98761

---

>gb|AC132400.3| Mus musculus BAC clone RP23-400A19 from 1, complete sequence
          Length = 218935

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   taatgatgtaatgcatgctc 210
             ||||||||||||||||||||
Sbjct: 64622 taatgatgtaatgcatgctc 64641

---

>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 30     agaacagtggagaggttgctgtcg 53
              |||| |||||||||||||||||||
Sbjct: 108932 agaaaagtggagaggttgctgtcg 108909


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,614,247
Number of Sequences: 3902068
Number of extensions: 3614247
Number of successful extensions: 69156
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 69034
Number of HSP's gapped (non-prelim): 123
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---