| Clone Name | rbaal2j17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468543.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1052 Score = 115 bits (58), Expect = 2e-22 Identities = 154/186 (82%) Strand = Plus / Minus Query: 373 tgcagctgcagctgctcgtgttgaggtttgcgccgcagacgaggcataggcccttgcagg 432 |||||||||||||||| |||||||||||| |||||||| | ||||| || || ||||||| Sbjct: 861 tgcagctgcagctgctggtgttgaggttttcgccgcagccaaggcagagacctttgcagg 802 Query: 433 tgctgctgcagaaaacgtccagcgttatctccaggtggatgatgtcccgaaggttcttcg 492 || ||||| | | || ||||| ||||||| ||| |||||||||| | || ||| | Sbjct: 801 tgggactgcacagggcatcgagcgtgatctccaagtgaatgatgtccctgatgtgctttg 742 Query: 493 agatgtcgatctccttctccccggccgggaaatgcaggcggtcatcccagtctatatctt 552 |||| || |||||||| || || || ||||||||||| ||||||||||| |||||||||| Sbjct: 741 agatatcaatctccttttctccagctgggaaatgcagccggtcatcccaatctatatctt 682 Query: 553 catcgt 558 |||||| Sbjct: 681 catcgt 676
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 115 bits (58), Expect = 2e-22 Identities = 154/186 (82%) Strand = Plus / Plus Query: 373 tgcagctgcagctgctcgtgttgaggtttgcgccgcagacgaggcataggcccttgcagg 432 |||||||||||||||| |||||||||||| |||||||| | ||||| || || ||||||| Sbjct: 35761482 tgcagctgcagctgctggtgttgaggttttcgccgcagccaaggcagagacctttgcagg 35761541 Query: 433 tgctgctgcagaaaacgtccagcgttatctccaggtggatgatgtcccgaaggttcttcg 492 || ||||| | | || ||||| ||||||| ||| |||||||||| | || ||| | Sbjct: 35761542 tgggactgcacagggcatcgagcgtgatctccaagtgaatgatgtccctgatgtgctttg 35761601 Query: 493 agatgtcgatctccttctccccggccgggaaatgcaggcggtcatcccagtctatatctt 552 |||| || |||||||| || || || ||||||||||| ||||||||||| |||||||||| Sbjct: 35761602 agatatcaatctccttttctccagctgggaaatgcagccggtcatcccaatctatatctt 35761661 Query: 553 catcgt 558 |||||| Sbjct: 35761662 catcgt 35761667
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1149_C12 Length = 120743 Score = 115 bits (58), Expect = 2e-22 Identities = 154/186 (82%) Strand = Plus / Plus Query: 373 tgcagctgcagctgctcgtgttgaggtttgcgccgcagacgaggcataggcccttgcagg 432 |||||||||||||||| |||||||||||| |||||||| | ||||| || || ||||||| Sbjct: 32197 tgcagctgcagctgctggtgttgaggttttcgccgcagccaaggcagagacctttgcagg 32256 Query: 433 tgctgctgcagaaaacgtccagcgttatctccaggtggatgatgtcccgaaggttcttcg 492 || ||||| | | || ||||| ||||||| ||| |||||||||| | || ||| | Sbjct: 32257 tgggactgcacagggcatcgagcgtgatctccaagtgaatgatgtccctgatgtgctttg 32316 Query: 493 agatgtcgatctccttctccccggccgggaaatgcaggcggtcatcccagtctatatctt 552 |||| || |||||||| || || || ||||||||||| ||||||||||| |||||||||| Sbjct: 32317 agatatcaatctccttttctccagctgggaaatgcagccggtcatcccaatctatatctt 32376 Query: 553 catcgt 558 |||||| Sbjct: 32377 catcgt 32382
>dbj|AK098955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060F18, full insert sequence Length = 1053 Score = 115 bits (58), Expect = 2e-22 Identities = 154/186 (82%) Strand = Plus / Minus Query: 373 tgcagctgcagctgctcgtgttgaggtttgcgccgcagacgaggcataggcccttgcagg 432 |||||||||||||||| |||||||||||| |||||||| | ||||| || || ||||||| Sbjct: 862 tgcagctgcagctgctggtgttgaggttttcgccgcagccaaggcagagacctttgcagg 803 Query: 433 tgctgctgcagaaaacgtccagcgttatctccaggtggatgatgtcccgaaggttcttcg 492 || ||||| | | || ||||| ||||||| ||| |||||||||| | || ||| | Sbjct: 802 tgggactgcacagggcatcgagcgtgatctccaagtgaatgatgtccctgatgtgctttg 743 Query: 493 agatgtcgatctccttctccccggccgggaaatgcaggcggtcatcccagtctatatctt 552 |||| || |||||||| || || || ||||||||||| ||||||||||| |||||||||| Sbjct: 742 agatatcaatctccttttctccagctgggaaatgcagccggtcatcccaatctatatctt 683 Query: 553 catcgt 558 |||||| Sbjct: 682 catcgt 677
>dbj|AK061847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-F03, full insert sequence Length = 1101 Score = 115 bits (58), Expect = 2e-22 Identities = 154/186 (82%) Strand = Plus / Minus Query: 373 tgcagctgcagctgctcgtgttgaggtttgcgccgcagacgaggcataggcccttgcagg 432 |||||||||||||||| |||||||||||| |||||||| | ||||| || || ||||||| Sbjct: 853 tgcagctgcagctgctggtgttgaggttttcgccgcagccaaggcagagacctttgcagg 794 Query: 433 tgctgctgcagaaaacgtccagcgttatctccaggtggatgatgtcccgaaggttcttcg 492 || ||||| | | || ||||| ||||||| ||| |||||||||| | || ||| | Sbjct: 793 tgggactgcacagggcatcgagcgtgatctccaagtgaatgatgtccctgatgtgctttg 734 Query: 493 agatgtcgatctccttctccccggccgggaaatgcaggcggtcatcccagtctatatctt 552 |||| || |||||||| || || || ||||||||||| ||||||||||| |||||||||| Sbjct: 733 agatatcaatctccttttctccagctgggaaatgcagccggtcatcccaatctatatctt 674 Query: 553 catcgt 558 |||||| Sbjct: 673 catcgt 668
>ref|XM_470995.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 957 Score = 75.8 bits (38), Expect = 2e-10 Identities = 149/186 (80%) Strand = Plus / Minus Query: 373 tgcagctgcagctgctcgtgttgaggtttgcgccgcagacgaggcataggcccttgcagg 432 |||||||||||||||| |||||||| ||| |||||||| | | ||| || || ||||||| Sbjct: 868 tgcagctgcagctgctggtgttgagattttcgccgcagccaacgcagagacctttgcagg 809 Query: 433 tgctgctgcagaaaacgtccagcgttatctccaggtggatgatgtcccgaaggttcttcg 492 || ||||| | | || ||||| ||||| | ||| |||||||||| | || ||||| Sbjct: 808 tgggactgcacagggcatcgagcgtgatctctaagtgaatgatgtccctgatgtgcttcg 749 Query: 493 agatgtcgatctccttctccccggccgggaaatgcaggcggtcatcccagtctatatctt 552 |||| || | |||||| || || || |||||||||| ||||||||||| |||||||||| Sbjct: 748 agatatcaacctccttttctccagctgggaaatgcaaccggtcatcccaatctatatctt 689 Query: 553 catcgt 558 | |||| Sbjct: 688 cgtcgt 683
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 75.8 bits (38), Expect = 2e-10 Identities = 149/186 (80%) Strand = Plus / Minus Query: 373 tgcagctgcagctgctcgtgttgaggtttgcgccgcagacgaggcataggcccttgcagg 432 |||||||||||||||| |||||||| ||| |||||||| | | ||| || || ||||||| Sbjct: 22211 tgcagctgcagctgctggtgttgagattttcgccgcagccaacgcagagacctttgcagg 22152 Query: 433 tgctgctgcagaaaacgtccagcgttatctccaggtggatgatgtcccgaaggttcttcg 492 || ||||| | | || ||||| ||||| | ||| |||||||||| | || ||||| Sbjct: 22151 tgggactgcacagggcatcgagcgtgatctctaagtgaatgatgtccctgatgtgcttcg 22092 Query: 493 agatgtcgatctccttctccccggccgggaaatgcaggcggtcatcccagtctatatctt 552 |||| || | |||||| || || || |||||||||| ||||||||||| |||||||||| Sbjct: 22091 agatatcaacctccttttctccagctgggaaatgcaaccggtcatcccaatctatatctt 22032 Query: 553 catcgt 558 | |||| Sbjct: 22031 cgtcgt 22026
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 75.8 bits (38), Expect = 2e-10 Identities = 149/186 (80%) Strand = Plus / Minus Query: 373 tgcagctgcagctgctcgtgttgaggtttgcgccgcagacgaggcataggcccttgcagg 432 |||||||||||||||| |||||||| ||| |||||||| | | ||| || || ||||||| Sbjct: 491243 tgcagctgcagctgctggtgttgagattttcgccgcagccaacgcagagacctttgcagg 491184 Query: 433 tgctgctgcagaaaacgtccagcgttatctccaggtggatgatgtcccgaaggttcttcg 492 || ||||| | | || ||||| ||||| | ||| |||||||||| | || ||||| Sbjct: 491183 tgggactgcacagggcatcgagcgtgatctctaagtgaatgatgtccctgatgtgcttcg 491124 Query: 493 agatgtcgatctccttctccccggccgggaaatgcaggcggtcatcccagtctatatctt 552 |||| || | |||||| || || || |||||||||| ||||||||||| |||||||||| Sbjct: 491123 agatatcaacctccttttctccagctgggaaatgcaaccggtcatcccaatctatatctt 491064 Query: 553 catcgt 558 | |||| Sbjct: 491063 cgtcgt 491058
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13, complete sequence Length = 130249 Score = 75.8 bits (38), Expect = 2e-10 Identities = 149/186 (80%) Strand = Plus / Minus Query: 373 tgcagctgcagctgctcgtgttgaggtttgcgccgcagacgaggcataggcccttgcagg 432 |||||||||||||||| |||||||| ||| |||||||| | | ||| || || ||||||| Sbjct: 129995 tgcagctgcagctgctggtgttgagattttcgccgcagccaacgcagagacctttgcagg 129936 Query: 433 tgctgctgcagaaaacgtccagcgttatctccaggtggatgatgtcccgaaggttcttcg 492 || ||||| | | || ||||| ||||| | ||| |||||||||| | || ||||| Sbjct: 129935 tgggactgcacagggcatcgagcgtgatctctaagtgaatgatgtccctgatgtgcttcg 129876 Query: 493 agatgtcgatctccttctccccggccgggaaatgcaggcggtcatcccagtctatatctt 552 |||| || | |||||| || || || |||||||||| ||||||||||| |||||||||| Sbjct: 129875 agatatcaacctccttttctccagctgggaaatgcaaccggtcatcccaatctatatctt 129816 Query: 553 catcgt 558 | |||| Sbjct: 129815 cgtcgt 129810
>gb|AY111828.1| Zea mays CL19868_1 mRNA sequence Length = 1037 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Plus Query: 519 gggaaatgcaggcggtcatcccagtctatatctt 552 ||||||||||| |||||||||||||| ||||||| Sbjct: 328 gggaaatgcagccggtcatcccagtcgatatctt 361 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 390 gtgttgaggtttgcgccgcagacgaggcataggcccttgcag 431 ||||||||||||||||||||| |||||||| ||||||||| Sbjct: 199 gtgttgaggtttgcgccgcaggtaaggcatagacccttgcag 240 Score = 44.1 bits (22), Expect = 0.63 Identities = 60/73 (82%) Strand = Plus / Plus Query: 648 gggtcttctgtcagcaggagagagaaattcgcgaatacngcttcggcagctggctcagca 707 ||||||||||||| ||| || |||||||| || |||| ||| | ||||||||||||| Sbjct: 451 gggtcttctgtcaacagcagggagaaattggcaaatataccttgaggagctggctcagca 510 Query: 708 caccggtagcagc 720 |||| | |||||| Sbjct: 511 cacctgaagcagc 523
>emb|AL807383.28| Mouse DNA sequence from clone RP23-286N14 on chromosome 4, complete sequence Length = 210053 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||||||||| Sbjct: 140078 ttctgaggaactgccaaagagattt 140102
>emb|BX005459.6| Zebrafish DNA sequence from clone CH211-214N22 in linkage group 6, complete sequence Length = 211210 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 aggcaatacaaatgataatcat 88 |||||||||||||||||||||| Sbjct: 42286 aggcaatacaaatgataatcat 42265
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 tgctgcagctgcagctgctcgt 391 |||||||||||||||||||||| Sbjct: 498683 tgctgcagctgcagctgctcgt 498662
>ref|NM_210936.1| Eremothecium gossypii AFR035Wp (AFR035W), mRNA Length = 2160 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 tgctgcagctgcagctgctcgt 391 |||||||||||||||||||||| Sbjct: 155 tgctgcagctgcagctgctcgt 134
>ref|XM_476103.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 840 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cgtgctgcagctgcagctgct 388 ||||||||||||||||||||| Sbjct: 738 cgtgctgcagctgcagctgct 718
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cgtgctgcagctgcagctgct 388 ||||||||||||||||||||| Sbjct: 73409 cgtgctgcagctgcagctgct 73389
>gb|AC166108.4| Mus musculus BAC clone RP23-192E10 from chromosome 1, complete sequence Length = 188836 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 153784 ttctgaggaactgccaaacagattt 153808
>gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007C23, complete sequence Length = 173764 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cgtgctgcagctgcagctgct 388 ||||||||||||||||||||| Sbjct: 173393 cgtgctgcagctgcagctgct 173373
>gb|AC120418.10| Mus musculus chromosome 6, clone RP24-474I24, complete sequence Length = 177307 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 63772 ttctgaggaactgccaaagtgattt 63796
>gb|AC140395.2| Mus musculus BAC clone RP24-183G4 from chromosome 6, complete sequence Length = 183546 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 146690 ttctgaggaactgccaaagtgattt 146666
>emb|CR812896.13| Zebrafish DNA sequence from clone DKEY-30K5 in linkage group 14, complete sequence Length = 207425 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 taaagactatcacacaagtta 258 ||||||||||||||||||||| Sbjct: 108744 taaagactatcacacaagtta 108724
>gb|AC125330.5| Mus musculus BAC clone RP23-217A6 from chromosome 6, complete sequence Length = 182355 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 111050 ttctgaggaactgccaaagtgattt 111026
>gb|AC132413.3| Mus musculus BAC clone RP23-375I11 from chromosome 1, complete sequence Length = 191541 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||| |||||||| Sbjct: 31833 ttctgaggaactgccagagagattt 31857
>gb|AC124766.3| Mus musculus BAC clone RP23-204I12 from 1, complete sequence Length = 196490 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 106976 ttctgaggaactgccaaacagattt 107000
>emb|BX510935.28| Zebrafish DNA sequence from clone DKEY-207L24 in linkage group 14, complete sequence Length = 128666 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 369 gtgctgcagctgcagctgctc 389 ||||||||||||||||||||| Sbjct: 32740 gtgctgcagctgcagctgctc 32720
>gb|AC122295.4| Mus musculus BAC clone RP23-263E3 from 13, complete sequence Length = 200289 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 117847 ttctgaggaactgccaaagtgattt 117823
>gb|AC121854.2| Mus musculus BAC clone RP24-97A15 from 7, complete sequence Length = 185164 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 124867 ttctgaggaactgccaaacagattt 124891
>gb|AC115891.7| Mus musculus chromosome 10, clone RP24-421G4, complete sequence Length = 166946 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 157910 ttctgaggaactgccaaatagattt 157934
>gb|AC110043.6| Mus musculus chromosome 10, clone RP23-296O20, complete sequence Length = 158081 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 22018 ttctgaggaactgccaaatagattt 22042
>gb|AC153538.10| Mus musculus 10 BAC RP23-136I11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210649 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagag 113 ||||||||||||||||||||| Sbjct: 58876 ttctgaggaactgccaaagag 58896
>emb|AL672240.13| Mouse DNA sequence from clone RP23-27I16 on chromosome 11, complete sequence Length = 224603 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 160241 ttctgaggaactgccaaagtgattt 160265
>emb|AL731896.10| Mouse DNA sequence from clone RP23-348D11 on chromosome 11 Contains a ribosomal protein L15 (Rpl15) pseudogene and a SNARE protein Ykt (0610042I15Rik) pseudogene, complete sequence Length = 226786 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 81177 ttctgaggaactgccaaacagattt 81153
>emb|AL833788.9| Mouse DNA sequence from clone RP23-99E6 on chromosome X, complete sequence Length = 167868 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 18417 ttctgaggaactgccaaacagattt 18441
>emb|BX890601.10| Zebrafish DNA sequence from clone CH211-51F19 in linkage group 14, complete sequence Length = 124859 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 212 gctgcatatcttgctcatgacaatc 236 |||||||||||||||||| |||||| Sbjct: 38128 gctgcatatcttgctcataacaatc 38104
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cgtgctgcagctgcagctgct 388 ||||||||||||||||||||| Sbjct: 6125840 cgtgctgcagctgcagctgct 6125820
>gb|AC073479.7| Homo sapiens BAC clone RP11-749J12 from 2, complete sequence Length = 196671 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 108564 ttctgaggaactgccaaagtgattt 108540
>gb|AC154172.4| Mus musculus BAC clone RP23-429K7 from chromosome 18, complete sequence Length = 209529 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagatttgcac 121 |||||||||||||||||| ||||||||| Sbjct: 109236 ttctgaggaactgccaaactgatttgcac 109264
>gb|AC153655.4| Mus musculus BAC clone RP23-451K20 from chromosome 1, complete sequence Length = 167208 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 141647 ttctgaggaactgccaaacagattt 141623
>emb|AL928693.9| Mouse DNA sequence from clone RP23-407K8 on chromosome 2, complete sequence Length = 206478 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 144972 ttctgaggaactgccaaagtgattt 144996
>emb|AL731776.7| Mouse DNA sequence from clone RP23-58B9 on chromosome X, complete sequence Length = 237321 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 212469 ttctgaggaactgccaaagtgattt 212493
>dbj|AK107675.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-A01, full insert sequence Length = 1540 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cgtgctgcagctgcagctgct 388 ||||||||||||||||||||| Sbjct: 888 cgtgctgcagctgcagctgct 868
>gb|AC140483.3| Mus musculus BAC clone RP24-145A22 from 1, complete sequence Length = 176649 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 6457 ttctgaggaactgccaaacagattt 6481
>gb|AC125007.9| Mus musculus chromosome 3, clone RP24-190F20, complete sequence Length = 149805 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 36310 ttctgaggaactgccaaacagattt 36334
>gb|AC120132.11| Mus musculus chromosome 6, clone RP23-105D1, complete sequence Length = 203185 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 92606 ttctgaggaactgccaaagtgattt 92582
>gb|AC118750.13| Mus musculus chromosome 10, clone RP24-198J23, complete sequence Length = 174226 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 97950 ttctgaggaactgccaaacagattt 97974
>gb|AC153617.3| Mus musculus 6 BAC RP23-177G20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199525 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 11309 ttctgaggaactgccaaagtgattt 11285
>gb|AC154298.2| Mus musculus BAC clone RP23-399K17 from chromosome 17, complete sequence Length = 199019 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 53303 ttctgaggaactgccaaagtgattt 53279
>gb|AC125525.3| Mus musculus BAC clone RP24-395H10 from 1, complete sequence Length = 195904 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 95467 ttctgaggaactgccaaagtgattt 95491
>gb|AC140425.3| Mus musculus BAC clone RP24-97E12 from 1, complete sequence Length = 187415 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 63753 ttctgaggaactgccaaacagattt 63729
>emb|BX005168.10| Mouse DNA sequence from clone RP23-204O8 on chromosome X, complete sequence Length = 143588 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 116164 ttctgaggaactgccaaacagattt 116140
>gb|AC058786.24| Mus musculus strain C57BL/6J chromosome 4 clone rp23-117o7, complete sequence Length = 209737 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 19617 ttctgaggaactgccaaagtgattt 19593
>gb|AC140797.10| Mus musculus chromosome 3, clone RP23-137D8, complete sequence Length = 153333 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 55050 ttctgaggaactgccaaacagattt 55026
>emb|AL671269.11| Mouse DNA sequence from clone RP23-143P22 on chromosome 4, complete sequence Length = 183416 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 87092 ttctgaggaactgccaaacagattt 87116
>emb|AL691503.6| Mouse DNA sequence from clone RP23-47N17 on chromosome X, complete sequence Length = 219711 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 12345 ttctgaggaactgccaaagtgattt 12321
>emb|AL450395.7| Mouse DNA sequence from clone RP23-145O4 on chromosome X, complete sequence Length = 198602 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 65838 ttctgaggaactgccaaagtgattt 65814
>emb|AL929257.9| Mouse DNA sequence from clone RP23-75A23 on chromosome 2, complete sequence Length = 180619 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 |||||||||||||||||| |||||| Sbjct: 90147 ttctgaggaactgccaaacagattt 90171
>emb|AL732476.12| Mouse DNA sequence from clone RP23-131A6 on chromosome 4, complete sequence Length = 194554 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 86486 ttctgaggaactgccaaagtgattt 86510
>emb|AL772176.6| Mouse DNA sequence from clone RP23-37B18 on chromosome 4, complete sequence Length = 127986 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagattt 117 ||||||||||||||||||| ||||| Sbjct: 39246 ttctgaggaactgccaaagtgattt 39270
>gb|AC166709.9| Mus musculus chromosome 1, clone RP23-406B10, complete sequence Length = 175924 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 13 caacataatatcctagcattgcattgca 40 |||||||||||| |||||||| |||||| Sbjct: 73060 caacataatatcatagcattgaattgca 73033
>ref|XM_550278.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2421 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 tgctgcagctgcagctgctc 389 |||||||||||||||||||| Sbjct: 172 tgctgcagctgcagctgctc 191
>gb|AC168222.2| Mus musculus BAC clone CH25-395E5 from chromosome 10, complete sequence Length = 96290 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 651 tcttctgtcagcaggagaga 670 |||||||||||||||||||| Sbjct: 47046 tcttctgtcagcaggagaga 47027
>ref|XM_512252.1| PREDICTED: Pan troglodytes DOT1-like, histone H3 methyltransferase (LOC455566), mRNA Length = 8310 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcggctcctccgtgctgcag 377 |||||||||||||||||||| Sbjct: 7781 gcggctcctccgtgctgcag 7800
>ref|XM_482962.1| Oryza sativa (japonica cultivar-group), mRNA Length = 741 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 185 gtgctgcagctgcagctgct 166
>ref|XM_515797.1| PREDICTED: Pan troglodytes LOC459620 (LOC459620), mRNA Length = 3108 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 ctccgtgctgcagctgcagctgct 388 ||||| |||||||||||||||||| Sbjct: 1422 ctccgagctgcagctgcagctgct 1445
>gb|AC104911.10| Mus musculus chromosome 3, clone RP23-427B4, complete sequence Length = 190932 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagatttgca 120 |||||||||||||||||| |||||||| Sbjct: 71934 ttctgaggaactgccaaaatgatttgca 71907
>gb|AC011249.7| Drosophila melanogaster clone BACR37F23, complete sequence Length = 164973 Score = 40.1 bits (20), Expect = 9.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 356 ctgcggctcctccgtgctgcagctgcagctgc 387 |||| ||||||||||||||| ||||| ||||| Sbjct: 62235 ctgctgctcctccgtgctgctgctgctgctgc 62266
>gb|BC044516.1| Danio rerio scavenger receptor class B, member 1, mRNA (cDNA clone MGC:55861 IMAGE:3818393), complete cds Length = 1788 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 548 atcttcatcgttctcgtcctcgctgcca 575 |||||||||| ||||| ||||||||||| Sbjct: 1555 atcttcatcgctctcggcctcgctgcca 1582
>gb|BC061694.1| Mus musculus membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4), mRNA (cDNA clone MGC:67817 IMAGE:6468172), complete cds Length = 2339 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 1230 gtgctgcagctgcagctgct 1249
>ref|XM_761986.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_173_11997_8287) partial mRNA Length = 3711 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 aagggaatttggttctgtct 602 |||||||||||||||||||| Sbjct: 1995 aagggaatttggttctgtct 1976
>gb|BC058776.1| Mus musculus membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4), mRNA (cDNA clone IMAGE:5401950), partial cds Length = 3862 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 2817 gtgctgcagctgcagctgct 2836
>gb|AC003989.1| Homo sapiens BAC clone CTB-7J15 from 7, complete sequence Length = 118103 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ctaaagactatcacacaagt 256 |||||||||||||||||||| Sbjct: 27081 ctaaagactatcacacaagt 27062
>gb|AC142335.1| Pan troglodytes BAC clone RP43-38M15 from 7, complete sequence Length = 181138 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ctaaagactatcacacaagt 256 |||||||||||||||||||| Sbjct: 160952 ctaaagactatcacacaagt 160933
>gb|AC111083.13| Mus musculus chromosome 3, clone RP23-142D9, complete sequence Length = 206194 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagatttgca 120 |||||||||||||||||| |||||||| Sbjct: 164 ttctgaggaactgccaaactgatttgca 191
>gb|AC162611.2| Mus musculus chromosome 3, clone RP24-86E1, complete sequence Length = 229643 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagatttgca 120 |||||||||||||||||| |||||||| Sbjct: 53946 ttctgaggaactgccaaaatgatttgca 53973
>gb|AC154110.3| Ornithorhynchus anatinus BAC clone OABb-462P24 from chromosome unknown, complete sequence Length = 169179 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 tccaggtggatgatgtcccg 481 |||||||||||||||||||| Sbjct: 78740 tccaggtggatgatgtcccg 78721
>emb|AJ748820.1| Mus musculus mRNA for membrane palmitoylated protein 4 (Mpp4 gene) Length = 1908 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 1194 gtgctgcagctgcagctgct 1213
>emb|AL662900.12| Mouse DNA sequence from clone RP23-413L24 on chromosome 11 Contains a CpG island, complete sequence Length = 190156 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagatttgca 120 |||||||||||||||||| |||||||| Sbjct: 70200 ttctgaggaactgccaaactgatttgca 70227
>emb|CR931733.2| Medicago truncatula chromosome 5 clone mth2-38a4, COMPLETE SEQUENCE Length = 124746 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 114697 gtgctgcagctgcagctgct 114678
>emb|AL954382.3| Mouse DNA sequence from clone RP23-214G6 on chromosome 4, complete sequence Length = 109456 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagatttgca 120 |||||||||||||||| | ||||||||| Sbjct: 58978 ttctgaggaactgccagacagatttgca 59005
>ref|NM_198921.1| Danio rerio scavenger receptor class B, member 1 (scarb1), mRNA Length = 1788 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 548 atcttcatcgttctcgtcctcgctgcca 575 |||||||||| ||||| ||||||||||| Sbjct: 1555 atcttcatcgctctcggcctcgctgcca 1582
>gb|AY119216.1| Drosophila melanogaster SD16006 full insert cDNA Length = 1921 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcagctgcagctgctcgt 391 |||||||||||||||||||| Sbjct: 209 ctgcagctgcagctgctcgt 190
>gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 from chromosome unknown, complete sequence Length = 199332 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ttcagacagtaagatgaggc 70 |||||||||||||||||||| Sbjct: 64421 ttcagacagtaagatgaggc 64440
>dbj|AB211523.1| Lycopersicon esculentum mRNA for hypothetical protein, complete cds, clone:FC10DE01 Length = 800 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 386 gtgctgcagctgcagctgct 405
>ref|NM_137386.2| Drosophila melanogaster CG18631-RA (CG18631), mRNA Length = 1907 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcagctgcagctgctcgt 391 |||||||||||||||||||| Sbjct: 209 ctgcagctgcagctgctcgt 190
>ref|NM_135199.2| Drosophila melanogaster CG31637-RA (CG31637), mRNA Length = 2677 Score = 40.1 bits (20), Expect = 9.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 356 ctgcggctcctccgtgctgcagctgcagctgc 387 |||| ||||||||||||||| ||||| ||||| Sbjct: 282 ctgctgctcctccgtgctgctgctgctgctgc 251
>dbj|AK139733.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020014A21 product:unclassifiable, full insert sequence Length = 1938 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 651 tcttctgtcagcaggagaga 670 |||||||||||||||||||| Sbjct: 820 tcttctgtcagcaggagaga 801
>gb|AY058647.1| Drosophila melanogaster LD35051 full length cDNA Length = 2583 Score = 40.1 bits (20), Expect = 9.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 356 ctgcggctcctccgtgctgcagctgcagctgc 387 |||| ||||||||||||||| ||||| ||||| Sbjct: 243 ctgctgctcctccgtgctgctgctgctgctgc 212
>gb|AC153652.3| Mus musculus BAC clone RP24-89C18 from chromosome 1, complete sequence Length = 168628 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 138412 gtgctgcagctgcagctgct 138431
>gb|AC144859.3| Mus musculus BAC clone RP24-158C2 from chromosome 5, complete sequence Length = 170762 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagatt 116 |||||||||||||||| ||||||| Sbjct: 5297 ttctgaggaactgccagagagatt 5320
>gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, region 54B-54C, BAC clone BACR21A09, complete sequence Length = 175506 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcagctgcagctgctcgt 391 |||||||||||||||||||| Sbjct: 133603 ctgcagctgcagctgctcgt 133584
>dbj|AK044682.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930032J21 product:MDLG6A homolog [Mus musculus], full insert sequence Length = 2967 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 1949 gtgctgcagctgcagctgct 1968
>gb|BC046992.1| Mus musculus membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4), mRNA (cDNA clone IMAGE:6466401), with apparent retained intron Length = 3383 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 2333 gtgctgcagctgcagctgct 2352
>gb|BC029664.1| Mus musculus membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4), mRNA (cDNA clone IMAGE:5361944), with apparent retained intron Length = 2614 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 1102 gtgctgcagctgcagctgct 1121
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 23568509 gtgctgcagctgcagctgct 23568490
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tgctgcagctgcagctgctc 389 |||||||||||||||||||| Sbjct: 3671838 tgctgcagctgcagctgctc 3671819
>ref|XM_392202.2| PREDICTED: Apis mellifera similar to CG17090-PA, isoform A (LOC408664), mRNA Length = 3825 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 tgctgcagctgcagctgctc 389 |||||||||||||||||||| Sbjct: 1971 tgctgcagctgcagctgctc 1990
>gb|AC008347.2|AC008347 Drosophila melanogaster, chromosome 2R, region 57A-57A, BAC clone BACR03N16, complete sequence Length = 165519 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 atcttcatcgttctcgtcctcgct 571 ||||||||||| |||||||||||| Sbjct: 95872 atcttcatcgtcctcgtcctcgct 95849
>gb|AC166977.6| Mus musculus chromosome 1, clone RP24-291A4, complete sequence Length = 151589 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 123019 gtgctgcagctgcagctgct 123000
>gb|AC154517.2| Mus musculus BAC clone RP24-85L11 from chromosome 12, complete sequence Length = 167631 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaaga 112 |||||||||||||||||||| Sbjct: 120355 ttctgaggaactgccaaaga 120336
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tgctgcagctgcagctgctc 389 |||||||||||||||||||| Sbjct: 80318 tgctgcagctgcagctgctc 80299
>gb|AC010136.8| Homo sapiens BAC clone RP11-129D2 from 2, complete sequence Length = 118522 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ccagtatttgcattttcacc 209 |||||||||||||||||||| Sbjct: 92860 ccagtatttgcattttcacc 92841
>emb|AL845175.22| Mouse DNA sequence from clone RP23-283M2 on chromosome 2, complete sequence Length = 123888 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagatttgca 120 |||||||||||||||||| |||||||| Sbjct: 76367 ttctgaggaactgccaaactgatttgca 76394
>dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1666_A04 Length = 90097 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 48284 gtgctgcagctgcagctgct 48265
>dbj|AK100017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013144J12, full insert sequence Length = 2421 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 tgctgcagctgcagctgctc 389 |||||||||||||||||||| Sbjct: 172 tgctgcagctgcagctgctc 191
>gb|AC154800.2| Mus musculus BAC clone RP24-496O9 from 14, complete sequence Length = 175264 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagatttgca 120 |||||||||||||||||| |||||||| Sbjct: 103558 ttctgaggaactgccaaactgatttgca 103531
>dbj|AK068118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135E06, full insert sequence Length = 2296 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 367 ccgtgctgcagctgcagctgctcgtgtt 394 ||||||||| ||||| |||||||||||| Sbjct: 323 ccgtgctgctgctgctgctgctcgtgtt 296
>gb|AC154692.2| Mus musculus BAC clone RP24-338M2 from 14, complete sequence Length = 165119 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagatttgca 120 ||||||||||| |||||| ||||||||| Sbjct: 138266 ttctgaggaaccgccaaacagatttgca 138293
>emb|BX276096.4| Zebrafish DNA sequence from clone CH211-240J18 in linkage group 5, complete sequence Length = 170664 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atgaggcaatacaaatgata 83 |||||||||||||||||||| Sbjct: 53291 atgaggcaatacaaatgata 53310
>dbj|AK059493.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-H04, full insert sequence Length = 741 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 185 gtgctgcagctgcagctgct 166
>gb|AC113278.15| Mus musculus chromosome 3, clone RP23-387I7, complete sequence Length = 180681 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagatttgca 120 |||||||||||||||||| |||||||| Sbjct: 48423 ttctgaggaactgccaaactgatttgca 48396
>emb|CR954185.2| Medicago truncatula chromosome 5 clone mth4-20m5, COMPLETE SEQUENCE Length = 210708 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 202023 gtgctgcagctgcagctgct 202042
>gb|AE003614.4| Drosophila melanogaster chromosome 2L, section 23 of 83 of the complete sequence Length = 259718 Score = 40.1 bits (20), Expect = 9.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 356 ctgcggctcctccgtgctgcagctgcagctgc 387 |||| ||||||||||||||| ||||| ||||| Sbjct: 1937 ctgctgctcctccgtgctgctgctgctgctgc 1906
>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete sequence Length = 290783 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctgcagctgcagctgctcgt 391 |||||||||||||||||||| Sbjct: 276620 ctgcagctgcagctgctcgt 276601
>gb|AE003791.5| Drosophila melanogaster chromosome 2R, section 59 of 73 of the complete sequence Length = 263535 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 atcttcatcgttctcgtcctcgct 571 ||||||||||| |||||||||||| Sbjct: 761 atcttcatcgtcctcgtcctcgct 738
>dbj|AP001001.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-677I18, complete sequence Length = 182429 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tttcagacagtaagatgagg 69 |||||||||||||||||||| Sbjct: 90465 tttcagacagtaagatgagg 90446
>gb|AC113464.17| Mus musculus chromosome 8, clone RP23-183P1, complete sequence Length = 191444 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagatttgca 120 |||||||||||||||||| |||||||| Sbjct: 89487 ttctgaggaactgccaaactgatttgca 89460
>dbj|AP000813.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-822P4, complete sequence Length = 210816 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tttcagacagtaagatgagg 69 |||||||||||||||||||| Sbjct: 188211 tttcagacagtaagatgagg 188192
>dbj|AP001929.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-640N11, complete sequence Length = 161547 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gatgtcgatctccttctccc 513 |||||||||||||||||||| Sbjct: 76475 gatgtcgatctccttctccc 76494
>gb|AC103623.13| Mus musculus chromosome 5, clone RP24-253A20, complete sequence Length = 170641 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagatt 116 |||||||||||||||| ||||||| Sbjct: 39760 ttctgaggaactgccagagagatt 39737
>gb|AF027737.1|AF027737 Nephila clavipes minor ampullate silk protein MiSp2 mRNA, partial cds Length = 472 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 299 gtgctgcagctgcagctgct 318
>ref|NM_145143.1| Mus musculus membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) (Mpp4), mRNA Length = 2251 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 1204 gtgctgcagctgcagctgct 1223
>emb|AL929147.7| Mouse DNA sequence from clone RP23-429P18 on chromosome 2, complete sequence Length = 155602 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 ttctgaggaactgccaaagagatttgca 120 |||||||||||||||||| |||||||| Sbjct: 62394 ttctgaggaactgccaaactgatttgca 62421
>emb|AL844863.7| Mouse DNA sequence from clone RP23-273C23 on chromosome X, complete sequence Length = 143387 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagatttgca 120 |||||||||||||||||| |||||||| Sbjct: 124364 ttctgaggaactgccaaactgatttgca 124337
>emb|AL713967.18| Mouse DNA sequence from clone RP23-132K17 on chromosome 4, complete sequence Length = 195305 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 93 ttctgaggaactgccaaagagatttgca 120 |||||||||||||||||| |||||||| Sbjct: 60203 ttctgaggaactgccaaactgatttgca 60176
>dbj|AB059358.1| Mus musculus mRNA for mDLG6B, complete cds Length = 2233 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 1186 gtgctgcagctgcagctgct 1205
>dbj|AB059357.1| Mus musculus mRNA for mDLG6A, complete cds Length = 2251 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gtgctgcagctgcagctgct 388 |||||||||||||||||||| Sbjct: 1204 gtgctgcagctgcagctgct 1223 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,935,519 Number of Sequences: 3902068 Number of extensions: 5935519 Number of successful extensions: 136601 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 136013 Number of HSP's gapped (non-prelim): 587 length of query: 720 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 697 effective length of database: 17,143,297,704 effective search space: 11948878499688 effective search space used: 11948878499688 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)