>RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein)|
           (Fertility restorer) (Restorer for CMS)
          Length = 791

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 13/64 (20%), Positives = 36/64 (56%)
 Frame = -2

Query: 577 DYYQEFRETGGTVDKTLAGLMVGVFCKTSRFNDLIQLLRDMKVQDTQLDRRLYMIVLNSL 398
           + Y    E+G  ++ +   +++   CK    +D +Q+ +++ + D +L+ R + I++++L
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661

Query: 397 REAG 386
            + G
Sbjct: 662 LKVG 665

>MA2B2_MOUSE (O54782) Epididymis-specific alpha-mannosidase precursor (EC|
           3.2.1.24) (Mannosidase alpha class 2B member 2)
          Length = 1018

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = +2

Query: 314 WSVKSGFLLHGIEVILEPPDMNLQPGFSEAVENDHVQPPVQLGVLHLHVPEQLDEVVEPA 493
           +S +SGF  +G+ V  EPP   + P  SE         PV    +HL+    +  V + A
Sbjct: 224 FSNRSGFYWNGVAVFPEPPPDGVYPNMSE---------PVTGANIHLYAEALVANVKQRA 274

Query: 494 GFAEHPH 514
            +   PH
Sbjct: 275 AWFRTPH 281

>HMEN_DROVI (P09145) Segmentation polarity homeobox protein engrailed|
          Length = 584

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
 Frame = +2

Query: 275 PHAPMLKMSTRNSWSVKSGFLLHGIEVILEPPDMNLQPGFSEAVENDHVQPPVQLGVLHL 454
           PH+P      ++   ++    +H I + +   DM+LQPG +      + Q  +Q    HL
Sbjct: 20  PHSP----PQQHQHILQPNLRIHAIPISITALDMSLQPGTAATAATLYQQQQLQ----HL 71

Query: 455 HVPEQL-----DEVVEPAGFAEHPHHEA 523
           H  +QL      ++   AG   HP   A
Sbjct: 72  HQLQQLQQLHQQQLAASAGVFHHPSTSA 99

>SYT_BUCAP (P46244) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA|
           ligase) (ThrRS)
          Length = 642

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +1

Query: 85  RIIELYSLSGKSGIRSFWWYNGAIFYNTFTVSISSRFKEHGGKQIFT 225
           +++ LY +  +S    FW  NG I +N   + +  + KE+  K++ T
Sbjct: 249 KLLNLYHMQKESPGMIFWHNNGWIIFNELEIFVREKLKEYKYKEVKT 295

>GCP_STRCO (O86793) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)|
           (Glycoprotease)
          Length = 374

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 491 PVQRPHPAAQGHEGAGHPAGQEAVHDRSQQ 402
           PV  PH   QGH   GHP G + VH+ S++
Sbjct: 342 PVTEPHVPGQGHPH-GHPHGHDHVHEVSKE 370

>OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinase)|
            (Obscurin-MLCK) (Obscurin-RhoGEF)
          Length = 7968

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 215  KYLPILLQIYRAVPFSRHPNPHAPM 289
            KYLP    I+R VP S  P P +PM
Sbjct: 7316 KYLPFEFMIFRKVPKSAQPEPPSPM 7340

>VE8_BPV4 (P08352) Hypothetical protein E8|
          Length = 52

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
 Frame = +3

Query: 117 IWNQIILVVQWCHF------LQY-IYSVNFFTIQGAWRQANIYLFCFKF 242
           +W   +L++ WC F        Y + SVNF+     W   N YL C  F
Sbjct: 3   LWLIYVLLLFWCAFNFCTVICNYCVPSVNFYYYSVRWMGLNFYLLCLLF 51

>Y48K_ELV (P35929) Hypothetical 48 kDa protein|
          Length = 440

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/72 (27%), Positives = 28/72 (38%)
 Frame = +1

Query: 184 SSRFKEHGGKQIFTYFASNLQSSAFLQTPKSSCSDAEDEHQELVEREIRFSPPRN*SNPG 363
           S RF      ++F         +  L  PK +C  A+      +   +  SPPR   NPG
Sbjct: 17  SPRFNLGSSSRLFCESTPIFIGTIPLHCPKGTCPPAQSHGHSSLRTNLNSSPPRCPQNPG 76

Query: 364 AT*HEPPARLLG 399
               EP  + LG
Sbjct: 77  T---EPSLQPLG 85

>PTN23_HUMAN (Q9H3S7) Tyrosine-protein phosphatase non-receptor type 23 (EC|
           3.1.3.48) (His-domain-containing protein tyrosine
           phosphatase) (HD-PTP) (Protein tyrosine phosphatase
           TD14) (PTP-TD14)
          Length = 1636

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = +1

Query: 229 FASNLQS--SAFLQTPKSSCSDAEDEHQELVEREIRFSPP 342
           F ++L+S  +A L+  +S+C   E   Q+L++RE++  PP
Sbjct: 678 FYADLESKVAALLERTQSTCQAREAARQQLLDRELKKKPP 717

>N4BP3_MOUSE (Q8C7U1) NEDD4-binding protein 3 (N4BP3)|
          Length = 537

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = -1

Query: 431 QEAVHDRSQQPPRSRAGGSCQV----APGLLQFRGG 336
           +EAVH   +Q PR  A GSC+     + GLL   GG
Sbjct: 416 REAVHSLQEQAPREEAPGSCETDDCKSRGLLGEAGG 451

>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
 Frame = -1

Query: 491 PVQRPHPAAQGHEGAGHPAGQEAVH----DRSQQPPRSRAGGSCQVAPGLLQFRG 339
           P QR  P  QGH GA  P G   ++     + +  P    G     APGL+  RG
Sbjct: 365 PGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPG-----APGLMGARG 414

>CD014_MOUSE (Q9JJG9) Protein C4orf14 homolog|
          Length = 693

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 467 AQGHEGAGHPAGQEAVHDRSQQPPRSRA 384
           A GH+G  +PAG E + +   Q P SR+
Sbjct: 281 APGHQGPQYPAGDEPLEEIKNQNPSSRS 308

>GLGA_CHLCV (Q821W4) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial|
           glycogen] synthase)
          Length = 475

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 559 RETGGTVDKTLAGLMVGVFCKTSRFNDLIQLL 464
           R TGG  D  + G+    F +T  FND + +L
Sbjct: 401 RSTGGLADTVVTGINGFTFSQTDNFNDFLHML 432

>CECR2_HUMAN (Q9BXF3) Cat eye syndrome critical region protein 2|
          Length = 1484

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 35/120 (29%), Positives = 44/120 (36%), Gaps = 27/120 (22%)
 Frame = +2

Query: 308  NSWSVKSGFLLHGIEVILEPPDMNLQPGFSEAVENDHVQPP------------------V 433
            N W+ +SGFL HG+     P    ++P    A     +QPP                  V
Sbjct: 841  NQWTEQSGFLPHGV-----PSSGYMRPPCKSA--GHRLQPPPVPAPSSLFGAPAQALRGV 893

Query: 434  QLGVLHLHVPE-----QLDEVVEPAGFAEHPHHEAGQGLVHRPSRLPE----LLVVVHAP 586
            Q G   +  PE     QL   V P G   HPH  A   L   P   P+    + V V AP
Sbjct: 894  QGGDSMMDSPEMIAMQQLSSRVCPPGVPYHPHQPAHPRL---PGPFPQVAHPMSVTVSAP 950

>YKZ7_YEAST (P36113) RING finger protein YKR017C|
          Length = 551

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 69  SMIPLYIQLYYSPYGGCNNLYRY 1
           S +P Y +L+YSP+  CN+ +R+
Sbjct: 278 SSLPEYTRLHYSPFVKCNSFHRF 300


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,580,779
Number of Sequences: 219361
Number of extensions: 1987629
Number of successful extensions: 6082
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6076
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)