ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2j07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SPO3_SCHPO (Q9US08) Sporulation-specific protein 3 30 6.1
2SI1L2_HUMAN (Q9P2F8) Signal-induced proliferation-associated 1-l... 30 8.0

>SPO3_SCHPO (Q9US08) Sporulation-specific protein 3|
          Length = 1028

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 542 CHYFSCLGCQNFVISSPSQFSAVLFSLYS 456
           C YFS   CQN  IS P + S  ++ ++S
Sbjct: 689 CDYFSKYACQNIFISKPLKRSGSIYEVFS 717



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>SI1L2_HUMAN (Q9P2F8) Signal-induced proliferation-associated 1-like protein 2|
          Length = 1722

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +3

Query: 288 THFIKRS*VTAIDFFSILRGRLFHTVSRIGHSAKEPFSFK*FHSCFKNLQMNIH 449
           T  I R  ++  +FF++LRG   + V    H A  PF F  F  C   +  ++H
Sbjct: 195 TSSIDRQGLSGENFFAMLRG---YRVENYDHKAMVPFGFPEFFRCDPAISPSLH 245


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,657,322
Number of Sequences: 219361
Number of extensions: 1591958
Number of successful extensions: 3052
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3052
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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