ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal2j07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 326 tttcttctcaattttacgaggaaggctcttccacaccgtttctcgtataggacattctgc 385 |||||||| |||||| ||||||||| |||||||||| | ||| ||| | |||| ||| | Sbjct: 16518076 tttcttcttaattttccgaggaaggttcttccacactgattcatgtagatgacaatcttc 16518135 Query: 386 taaagaaccattttccttcaagtaattccattcttgttttaagaatct 433 |||||||||| ||| |||| ||| |||||||||| ||| | |||||| Sbjct: 16518136 taaagaaccagttttattcaggtagttccattcttctttaaggaatct 16518183
>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12 Length = 152449 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 326 tttcttctcaattttacgaggaaggctcttccacaccgtttctcgtataggacattctgc 385 |||||||| |||||| ||||||||| |||||||||| | ||| ||| | |||| ||| | Sbjct: 14056 tttcttcttaattttccgaggaaggttcttccacactgattcatgtagatgacaatcttc 14115 Query: 386 taaagaaccattttccttcaagtaattccattcttgttttaagaatct 433 |||||||||| ||| |||| ||| |||||||||| ||| | |||||| Sbjct: 14116 taaagaaccagttttattcaggtagttccattcttctttaaggaatct 14163
>dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0404G03 Length = 135225 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 326 tttcttctcaattttacgaggaaggctcttccacaccgtttctcgtataggacattctgc 385 |||||||| |||||| ||||||||| |||||||||| | ||| ||| | |||| ||| | Sbjct: 127394 tttcttcttaattttccgaggaaggttcttccacactgattcatgtagatgacaatcttc 127453 Query: 386 taaagaaccattttccttcaagtaattccattcttgttttaagaatct 433 |||||||||| ||| |||| ||| |||||||||| ||| | |||||| Sbjct: 127454 taaagaaccagttttattcaggtagttccattcttctttaaggaatct 127501
>dbj|AK121622.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045C16, full insert sequence Length = 4278 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 326 tttcttctcaattttacgaggaaggctcttccacaccgtttctcgtataggacattctgc 385 |||||||| |||||| ||||||||| |||||||||| | ||| ||| | |||| ||| | Sbjct: 3391 tttcttcttaattttccgaggaaggttcttccacactgattcatgtagatgacaatcttc 3332 Query: 386 taaagaaccattttccttcaagtaattccattcttgttttaagaatct 433 |||||||||| ||| |||| ||| |||||||||| ||| | |||||| Sbjct: 3331 taaagaaccagttttattcaggtagttccattcttctttaaggaatct 3284
>dbj|AK064330.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F11, full insert sequence Length = 2229 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 326 tttcttctcaattttacgaggaaggctcttccacaccgtttctcgtataggacattctgc 385 |||||||| |||||| ||||||||| |||||||||| | ||| ||| | |||| ||| | Sbjct: 1342 tttcttcttaattttccgaggaaggttcttccacactgattcatgtagatgacaatcttc 1283 Query: 386 taaagaaccattttccttcaagtaattccattcttgttttaagaatct 433 |||||||||| ||| |||| ||| |||||||||| ||| | |||||| Sbjct: 1282 taaagaaccagttttattcaggtagttccattcttctttaaggaatct 1235
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 618 taaaaagggcagcccggtgcatgtagct 645 |||||||||||||||||||||||||||| Sbjct: 188603 taaaaagggcagcccggtgcatgtagct 188576
>gb|AY747604.1| Triticum aestivum cultivar Triple Dirk C line VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 619 aaaaagggcagcccggtgcatgtagct 645 ||||||||||||||||||||||||||| Sbjct: 8517 aaaaagggcagcccggtgcatgtagct 8491
>gb|AY747603.1| Triticum aestivum cultivar Triple Dirk B line VRN-B1 (VRN-B1) gene, complete cds Length = 6297 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 619 aaaaagggcagcccggtgcatgtagct 645 ||||||||||||||||||||||||||| Sbjct: 1674 aaaaagggcagcccggtgcatgtagct 1648
>gb|AY747602.1| Triticum turgidum cultivar Langdon clone BAC 1225D16 VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 619 aaaaagggcagcccggtgcatgtagct 645 ||||||||||||||||||||||||||| Sbjct: 8518 aaaaagggcagcccggtgcatgtagct 8492
>gb|AC140658.2| Homo sapiens chromosome 16 clone RP11-812E19, complete sequence Length = 188406 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 ttttgttattcagatttgaaatg 203 ||||||||||||||||||||||| Sbjct: 147636 ttttgttattcagatttgaaatg 147658
>emb|AL391995.7| Human DNA sequence from clone RP11-522N4 on chromosome 13, complete sequence Length = 178920 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 588 caaaaatgtatgaaataaatgat 610 ||||||||||||||||||||||| Sbjct: 104511 caaaaatgtatgaaataaatgat 104533
>gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, complete sequence Length = 186890 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 181 ttttgttattcagatttgaaatg 203 ||||||||||||||||||||||| Sbjct: 163086 ttttgttattcagatttgaaatg 163064
>gb|AY465427.2| Triticum turgidum subsp. durum putative C3H2C3 RING-finger protein (6G2) gene, complete cds Length = 3646 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 619 aaaaagggcagcccggtgcatgtagct 645 |||| |||||||||||||||||||||| Sbjct: 2106 aaaaggggcagcccggtgcatgtagct 2132
>gb|AC007028.3| Homo sapiens chromosome 16 clone RP5-835P2, complete sequence Length = 148807 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 ttttgttattcagatttgaaatg 203 ||||||||||||||||||||||| Sbjct: 45707 ttttgttattcagatttgaaatg 45729
>gb|AC141272.3| Homo sapiens chromosome 16 clone RP11-1415K9, complete sequence Length = 185187 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 181 ttttgttattcagatttgaaatg 203 ||||||||||||||||||||||| Sbjct: 77491 ttttgttattcagatttgaaatg 77469
>gb|AC141248.2| Homo sapiens chromosome 16 clone RP11-1251B5, complete sequence Length = 173206 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 181 ttttgttattcagatttgaaatg 203 ||||||||||||||||||||||| Sbjct: 102797 ttttgttattcagatttgaaatg 102775
>gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, complete sequence Length = 193708 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 181 ttttgttattcagatttgaaatg 203 ||||||||||||||||||||||| Sbjct: 173801 ttttgttattcagatttgaaatg 173779
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 619 aaaaagggcagcccggtgcatgtagct 645 |||| |||||||||||||||||||||| Sbjct: 6545 aaaaggggcagcccggtgcatgtagct 6571
>gb|AC140849.8| Medicago truncatula clone mth2-17f20, complete sequence Length = 136131 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 617 ataaaaagggcagcccggtgca 638 |||||||||||||||||||||| Sbjct: 133952 ataaaaagggcagcccggtgca 133973
>gb|AC138027.3| Mus musculus BAC clone RP24-100L8 from 12, complete sequence Length = 201839 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 452 ttttagaatacaatgaaaataa 473 |||||||||||||||||||||| Sbjct: 126588 ttttagaatacaatgaaaataa 126609
>gb|AC164111.4| Mus musculus BAC clone RP23-267E11 from chromosome 6, complete sequence Length = 179265 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 attttagaatacaatgaaaat 471 ||||||||||||||||||||| Sbjct: 37400 attttagaatacaatgaaaat 37380
>emb|CT009509.7| Mouse DNA sequence from clone RP23-140C10 on chromosome 13, complete sequence Length = 218144 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 caatacatgctattaaaaaat 72 ||||||||||||||||||||| Sbjct: 146839 caatacatgctattaaaaaat 146819
>gb|AC125155.4| Mus musculus BAC clone RP24-380D9 from chromosome 6, complete sequence Length = 173003 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 589 aaaaatgtatgaaataaatga 609 ||||||||||||||||||||| Sbjct: 70637 aaaaatgtatgaaataaatga 70617
>emb|CR731003.2|CNS0GQZK Tetraodon nigroviridis full-length cDNA Length = 1810 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 agctaacctcaaagcacacat 279 ||||||||||||||||||||| Sbjct: 905 agctaacctcaaagcacacat 925
>gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, complete sequence Length = 249008 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 taatggcatgccaaaataata 555 ||||||||||||||||||||| Sbjct: 117141 taatggcatgccaaaataata 117161
>emb|CR704219.2|CNS0G6BR Tetraodon nigroviridis full-length cDNA Length = 1782 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 agctaacctcaaagcacacat 279 ||||||||||||||||||||| Sbjct: 872 agctaacctcaaagcacacat 892
>emb|CR699567.1|CNS0G2QJ Tetraodon nigroviridis full-length cDNA Length = 1218 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 agctaacctcaaagcacacat 279 ||||||||||||||||||||| Sbjct: 321 agctaacctcaaagcacacat 341
>emb|CR696728.2|CNS0G0JO Tetraodon nigroviridis full-length cDNA Length = 1075 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 agctaacctcaaagcacacat 279 ||||||||||||||||||||| Sbjct: 170 agctaacctcaaagcacacat 190
>emb|CR696025.2|CNS0G005 Tetraodon nigroviridis full-length cDNA Length = 1340 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 agctaacctcaaagcacacat 279 ||||||||||||||||||||| Sbjct: 877 agctaacctcaaagcacacat 897
>emb|CR693504.2|CNS0FY24 Tetraodon nigroviridis full-length cDNA Length = 1082 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 agctaacctcaaagcacacat 279 ||||||||||||||||||||| Sbjct: 170 agctaacctcaaagcacacat 190
>emb|CR692935.2|CNS0FXMB Tetraodon nigroviridis full-length cDNA Length = 1068 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 agctaacctcaaagcacacat 279 ||||||||||||||||||||| Sbjct: 169 agctaacctcaaagcacacat 189
>emb|CR692888.2|CNS0FXL0 Tetraodon nigroviridis full-length cDNA Length = 1797 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 agctaacctcaaagcacacat 279 ||||||||||||||||||||| Sbjct: 891 agctaacctcaaagcacacat 911
>emb|CR682967.2|CNS0FPXF Tetraodon nigroviridis full-length cDNA Length = 1757 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 agctaacctcaaagcacacat 279 ||||||||||||||||||||| Sbjct: 867 agctaacctcaaagcacacat 887
>emb|CR647417.2|CNS0EYIN Tetraodon nigroviridis full-length cDNA Length = 1621 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 agctaacctcaaagcacacat 279 ||||||||||||||||||||| Sbjct: 724 agctaacctcaaagcacacat 744
>emb|AL121977.11|HSJ492P14 Human DNA sequence from clone RP3-492P14 on chromosome 6q13-15 Contains a single stranded DNA binding protein pseudogene, the TPBG gene for trophoblast glycoprotein (5T4-AG) and a CpG island, complete sequence Length = 121909 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 596 tatgaaataaatgatacttta 616 ||||||||||||||||||||| Sbjct: 83602 tatgaaataaatgatacttta 83582
>emb|BX119926.20| Zebrafish DNA sequence from clone CH211-42C8 in linkage group 14, complete sequence Length = 174863 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 439 tgaacatacataattttagaataca 463 ||||||||||||||| ||||||||| Sbjct: 104827 tgaacatacataattctagaataca 104803
>gb|AC008540.6| Homo sapiens chromosome 19 clone CTC-496P20, complete sequence Length = 224931 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 456 agaatacaatgaaaataatacagca 480 ||||||||||||||| ||||||||| Sbjct: 213877 agaatacaatgaaaaaaatacagca 213853
>gb|AC078813.13| Homo sapiens 3q BAC RP11-149B11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 tagaatacaatgaaaataata 475 ||||||||||||||||||||| Sbjct: 26523 tagaatacaatgaaaataata 26543
>gb|AC122735.18| Mus musculus chromosome 3, clone RP23-215I1, complete sequence Length = 182999 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 acaagaaaagtaatggcatgc 545 ||||||||||||||||||||| Sbjct: 170128 acaagaaaagtaatggcatgc 170108
>gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, complete sequence Length = 194860 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 aaagtaatggcatgccaaaat 551 ||||||||||||||||||||| Sbjct: 74901 aaagtaatggcatgccaaaat 74921
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 atacataattttagaatacaa 464 ||||||||||||||||||||| Sbjct: 2088829 atacataattttagaatacaa 2088809
>ref|XM_394037.2| PREDICTED: Apis mellifera similar to CG4557-PA (LOC410558), mRNA Length = 4959 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 aaatgatactttaataaaaag 624 ||||||||||||||||||||| Sbjct: 3654 aaatgatactttaataaaaag 3674
>gb|AC017088.8| Homo sapiens BAC clone RP11-496P1 from 2, complete sequence Length = 200440 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 451 attttagaatacaatgaaaataata 475 |||||||||||| |||||||||||| Sbjct: 79299 attttagaatacgatgaaaataata 79323
>gb|U95739.1|HSU95739 Human chromosome 16p11.2-p12 BAC clone CIT987SK-224D6 complete sequence Length = 69015 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 456 agaatacaatgaaaataatacagca 480 ||||||||||||||| ||||||||| Sbjct: 29100 agaatacaatgaaaaaaatacagca 29076
>emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in linkage group 6, complete sequence Length = 170067 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 gaatctacaaatgaacataca 448 ||||||||||||||||||||| Sbjct: 51248 gaatctacaaatgaacataca 51228
>gb|AC167016.5| Mus musculus chromosome 3, clone RP23-76C12, complete sequence Length = 225524 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 acaagaaaagtaatggcatgc 545 ||||||||||||||||||||| Sbjct: 39486 acaagaaaagtaatggcatgc 39466
>gb|AC124707.4| Mus musculus BAC clone RP24-73H16 from 12, complete sequence Length = 196237 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 450 aattttagaatacaatgaaaataat 474 ||||||||||||||| ||||||||| Sbjct: 120903 aattttagaatacaaagaaaataat 120927
>gb|AC154026.1| Mus musculus 6 NOVECTOR RP24-423A5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172016 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 aatgtatgaaataaatgata 611 |||||||||||||||||||| Sbjct: 50779 aatgtatgaaataaatgata 50760
>ref|XM_633044.1| Dictyostelium discoideum hypothetical protein (DDB0186581), partial mRNA Length = 1275 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 588 caaaaatgtatgaaataaatgata 611 ||||||| |||||||||||||||| Sbjct: 1220 caaaaatatatgaaataaatgata 1243
>gb|AC108777.7| Mus musculus chromosome 18, clone RP23-368H22, complete sequence Length = 216024 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 aaaaattccaagaggttgtc 115 |||||||||||||||||||| Sbjct: 127618 aaaaattccaagaggttgtc 127599
>gb|AC163676.4| Mus musculus BAC clone RP24-81A22 from chromosome 3, complete sequence Length = 223760 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 aaaaattccaagaggttgtc 115 |||||||||||||||||||| Sbjct: 78939 aaaaattccaagaggttgtc 78958
>gb|AC102231.12| Mus musculus chromosome 18, clone RP24-76A21, complete sequence Length = 174136 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 tataataggtacattctatcagct 256 ||||||| |||||||||||||||| Sbjct: 76576 tataatatgtacattctatcagct 76553
>gb|AC102688.10| Mus musculus chromosome 5, clone RP24-138J15, complete sequence Length = 166655 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 450 aattttagaatacaatgaaaataa 473 ||||||||||| |||||||||||| Sbjct: 74714 aattttagaattcaatgaaaataa 74737
>gb|AC147033.2| Pan troglodytes BAC clone RP43-99I5 from 7, complete sequence Length = 188305 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 gacaccctagacaagaaaag 534 |||||||||||||||||||| Sbjct: 165791 gacaccctagacaagaaaag 165772
>gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome 19, complete sequence Length = 208557 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 aatacatgctattaaaaaat 72 |||||||||||||||||||| Sbjct: 134121 aatacatgctattaaaaaat 134102
>gb|AC138548.8| Mus musculus chromosome 3, clone RP24-210N9, complete sequence Length = 155964 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 aaaaattccaagaggttgtc 115 |||||||||||||||||||| Sbjct: 105583 aaaaattccaagaggttgtc 105564
>emb|CR974427.5| Mouse DNA sequence from clone RP24-319N23 on chromosome 17, complete sequence Length = 180395 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tgctattttcctgagtgact 166 |||||||||||||||||||| Sbjct: 102380 tgctattttcctgagtgact 102361
>gb|AC145877.3| Pan troglodytes BAC clone RP43-20I7 from 7, complete sequence Length = 192794 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 gacaccctagacaagaaaag 534 |||||||||||||||||||| Sbjct: 181641 gacaccctagacaagaaaag 181660
>emb|CR956430.2| M.truncatula DNA sequence from clone MTH2-49I19 on chromosome 3, complete sequence Length = 97738 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 aaaaagggcagcccggtgca 638 |||||||||||||||||||| Sbjct: 29985 aaaaagggcagcccggtgca 30004
>gb|AC117608.13| Mus musculus chromosome 14, clone RP23-100O3, complete sequence Length = 210905 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 aaaaattccaagaggttgtc 115 |||||||||||||||||||| Sbjct: 70979 aaaaattccaagaggttgtc 70960
>emb|CR686721.2|CNS0FSTP Tetraodon nigroviridis full-length cDNA Length = 1056 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gctaacctcaaagcacacat 279 |||||||||||||||||||| Sbjct: 169 gctaacctcaaagcacacat 188
>gb|AC119805.6| Mus musculus chromosome 16, clone RP23-144H22, complete sequence Length = 215566 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 ctcaaagcacacatctcagtacac 289 |||||||||||||||||| ||||| Sbjct: 121310 ctcaaagcacacatctcactacac 121333
>gb|AC135413.43| Medicago truncatula clone mth2-16n19, complete sequence Length = 92216 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aaaaagggcagcccggtgca 638 |||||||||||||||||||| Sbjct: 6548 aaaaagggcagcccggtgca 6529
>gb|AC136503.46| Medicago truncatula clone mth2-15n1, complete sequence Length = 117475 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aataatggttttgttattca 192 |||||||||||||||||||| Sbjct: 53684 aataatggttttgttattca 53665
>gb|AC135100.12| Medicago truncatula clone mth2-17j9, complete sequence Length = 113967 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aaaaagggcagcccggtgca 638 |||||||||||||||||||| Sbjct: 59636 aaaaagggcagcccggtgca 59617
>emb|CR932961.2| Medicago truncatula chromosome 5 clone mth2-62c4, COMPLETE SEQUENCE Length = 119142 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 aaaagggcagcccggtgcat 639 |||||||||||||||||||| Sbjct: 49032 aaaagggcagcccggtgcat 49013
>emb|AL445312.5| Human DNA sequence from clone RP11-12L2 on chromosome Xp11.1-11.22, complete sequence Length = 170984 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 aagaatctacaaatgaacat 445 |||||||||||||||||||| Sbjct: 63354 aagaatctacaaatgaacat 63335
>emb|AL354774.17| Human DNA sequence from clone RP11-67L17 on chromosome 13, complete sequence Length = 125693 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 caaaaatgtatgaaataaat 607 |||||||||||||||||||| Sbjct: 4716 caaaaatgtatgaaataaat 4735
>emb|AL157884.9| Human DNA sequence from clone RP11-462B18 on chromosome 9p13.1-21.1 Contains a pseudogene similar to part of membrane guanylyl cyclase, a ribosomal protein S11 (RPS11) pseudogene, a novel gene and a CpG island, complete sequence Length = 176932 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 gcaaaaatgtatgaaataaa 606 |||||||||||||||||||| Sbjct: 79439 gcaaaaatgtatgaaataaa 79420
>gb|AC125787.2| Homo sapiens chromosome 5 clone CTD-2137I20, complete sequence Length = 117180 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 417 tcttgttttaagaatctacaaatg 440 ||||||||||||||||| |||||| Sbjct: 47041 tcttgttttaagaatctgcaaatg 47064
>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete sequence Length = 185915 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 603 taaatgatactttaataaaaaggg 626 ||||||| |||||||||||||||| Sbjct: 110520 taaatgaaactttaataaaaaggg 110497
>emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 58 Length = 193550 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ttttgttattcagatttgaa 200 |||||||||||||||||||| Sbjct: 117179 ttttgttattcagatttgaa 117160
>emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BAC clone F7H19 (ESSA project) Length = 139316 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ttttgttattcagatttgaa 200 |||||||||||||||||||| Sbjct: 88092 ttttgttattcagatttgaa 88073
>gb|AC122176.2| Homo sapiens chromosome 3 clone RP11-294O18, complete sequence Length = 176367 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 taatacagcagaaaactgag 490 |||||||||||||||||||| Sbjct: 165468 taatacagcagaaaactgag 165449
>emb|BX647550.1|HSM807696 Homo sapiens mRNA; cDNA DKFZp686N0997 (from clone DKFZp686N0997) Length = 3559 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 gcaaaaatgtatgaaataaa 606 |||||||||||||||||||| Sbjct: 2193 gcaaaaatgtatgaaataaa 2174
>emb|CR749589.1| Homo sapiens mRNA; cDNA DKFZp686I2292 (from clone DKFZp686I2292) Length = 5098 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 gcaaaaatgtatgaaataaa 606 |||||||||||||||||||| Sbjct: 2056 gcaaaaatgtatgaaataaa 2037
>emb|BX890571.10| Zebrafish DNA sequence from clone CH211-57F7, complete sequence Length = 167315 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ttgttttaagaatctacaaa 438 |||||||||||||||||||| Sbjct: 96554 ttgttttaagaatctacaaa 96535
>dbj|AK125320.1| Homo sapiens cDNA FLJ43330 fis, clone NT2RI3005403 Length = 3581 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 gcaaaaatgtatgaaataaa 606 |||||||||||||||||||| Sbjct: 2234 gcaaaaatgtatgaaataaa 2215
>gb|AC118562.3| Homo sapiens BAC clone RP11-454O15 from 4, complete sequence Length = 178014 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 tagaatacaatgaaaataat 474 |||||||||||||||||||| Sbjct: 28322 tagaatacaatgaaaataat 28341
>gb|AC113146.2| Homo sapiens chromosome 15, clone RP11-265N7, complete sequence Length = 178395 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ttccattcttgttttaagaa 430 |||||||||||||||||||| Sbjct: 99277 ttccattcttgttttaagaa 99296
>gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H10 map CIC11C08, complete sequence Length = 96066 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 aaatgaacatacataatttt 455 |||||||||||||||||||| Sbjct: 3171 aaatgaacatacataatttt 3190
>gb|AC004625.3| Arabidopsis thaliana chromosome 2 clone T26J13 map CIC11C08, complete sequence Length = 42499 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 aaatgaacatacataatttt 455 |||||||||||||||||||| Sbjct: 1942 aaatgaacatacataatttt 1923
>gb|AC078963.16| Homo sapiens 12q BAC RP11-362K2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 123253 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 aaaaatgtatgaaataaatg 608 |||||||||||||||||||| Sbjct: 18163 aaaaatgtatgaaataaatg 18182
>gb|AC093114.2| Homo sapiens chromosome 3 clone RP11-339O5, complete sequence Length = 167241 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 taatacagcagaaaactgag 490 |||||||||||||||||||| Sbjct: 104246 taatacagcagaaaactgag 104265
>gb|AC012492.9| Homo sapiens BAC clone RP11-224B10 from 2, complete sequence Length = 183584 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 aatgaacatacataatttta 456 |||||||||||||||||||| Sbjct: 105254 aatgaacatacataatttta 105273
>gb|AC149131.3| Medicago truncatula chromosome 7 BAC clone mth2-19e15, complete sequence Length = 122492 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aaaaagggcagcccggtgca 638 |||||||||||||||||||| Sbjct: 98786 aaaaagggcagcccggtgca 98767
>gb|AC015553.21|AC015553 Homo sapiens 9 BAC RP11-100N10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162063 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 gcaaaaatgtatgaaataaa 606 |||||||||||||||||||| Sbjct: 18862 gcaaaaatgtatgaaataaa 18843
>gb|AC160399.6| Mus musculus 6 BAC RP23-218B15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196625 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 ttagaatacaatgaaaataa 473 |||||||||||||||||||| Sbjct: 57055 ttagaatacaatgaaaataa 57074
>ref|XM_395047.2| PREDICTED: Apis mellifera similar to GA16139-PA (LOC411576), mRNA Length = 1707 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 ttttccttcaagtaattcca 415 |||||||||||||||||||| Sbjct: 1431 ttttccttcaagtaattcca 1412
>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5, complete sequence Length = 160041 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 603 taaatgatactttaataaaaaggg 626 ||||||| |||||||||||||||| Sbjct: 16653 taaatgaaactttaataaaaaggg 16630
>gb|AC022841.4|AC022841 Homo sapiens chromosome 15, clone RP11-213C21, complete sequence Length = 157657 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 ttccattcttgttttaagaa 430 |||||||||||||||||||| Sbjct: 114378 ttccattcttgttttaagaa 114359
>gb|AC110527.13| Mus musculus chromosome 1, clone RP23-204H10, complete sequence Length = 173497 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 aaaatgtatgaaataaatga 609 |||||||||||||||||||| Sbjct: 136951 aaaatgtatgaaataaatga 136932
>ref|NM_212558.1| Homo sapiens similar to RIKEN A930001M12 (LOC401498), mRNA Length = 3581 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 gcaaaaatgtatgaaataaa 606 |||||||||||||||||||| Sbjct: 2234 gcaaaaatgtatgaaataaa 2215
>gb|AC011245.13| Homo sapiens BAC clone RP11-498O5 from 2, complete sequence Length = 57181 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 ttccattcttgttttaagaatcta 434 ||||||||||||||||| |||||| Sbjct: 49291 ttccattcttgttttaacaatcta 49268
>gb|AC138761.4| Homo sapiens chromosome 17, clone RP11-1109M24, complete sequence Length = 155327 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 ttttaagaatctacaaatgaacat 445 ||||||||||||||||| |||||| Sbjct: 91288 ttttaagaatctacaaaggaacat 91265
>gb|AC078844.2|AC078844 Homo sapiens chromosome 7 clone RP11-786M13, complete sequence Length = 186927 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 gacaccctagacaagaaaag 534 |||||||||||||||||||| Sbjct: 71521 gacaccctagacaagaaaag 71502
>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence Length = 268433 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tacatgctattaaaaaatta 74 |||||||||||||||||||| Sbjct: 26995 tacatgctattaaaaaatta 27014
>gb|AF511349.1| Sus scrofa clone UMNp544 microsatellite sequence Length = 525 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 600 aaataaatgatactttaataaaaa 623 |||||||| ||||||||||||||| Sbjct: 88 aaataaattatactttaataaaaa 65
>dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07, map 22, complete sequences Length = 180152 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 aatacaatgaaaataataca 477 |||||||||||||||||||| Sbjct: 148065 aatacaatgaaaataataca 148084
>gb|AC008372.6|AC008372 Homo sapiens chromosome 14 clones RP11-111O16 and RP11-61F4 containing genes for nuclear receptor coactivator NCoA-62 (nuclear receptor coactivator NCoA-62) gene, complete cds; and unknown gene, complete sequence Length = 268238 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 aaatgaacatacataatttt 455 |||||||||||||||||||| Sbjct: 186952 aaatgaacatacataatttt 186933
>gb|AC133086.4| Mus musculus BAC clone RP24-110I11 from 6, complete sequence Length = 212696 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 ttagaatacaatgaaaataa 473 |||||||||||||||||||| Sbjct: 13681 ttagaatacaatgaaaataa 13662
>emb|BX890545.7| Zebrafish DNA sequence from clone CH211-253N4 in linkage group 4, complete sequence Length = 186267 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 caaaaatgtatgaaataaat 607 |||||||||||||||||||| Sbjct: 6363 caaaaatgtatgaaataaat 6344
>emb|BX511094.6| Zebrafish DNA sequence from clone CH211-137G12 in linkage group 19, complete sequence Length = 154360 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 atgaaataaatgatacttta 616 |||||||||||||||||||| Sbjct: 136285 atgaaataaatgatacttta 136266
>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5) Length = 896449 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ttctgctaaagaaccatttt 399 |||||||||||||||||||| Sbjct: 271217 ttctgctaaagaaccatttt 271236
>gb|AC006265.1|AC006265 Homo sapiens chromosome 17, clone hRPK.566_B_16, complete sequence Length = 177707 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 ttagaatacaatgaaaataa 473 |||||||||||||||||||| Sbjct: 154485 ttagaatacaatgaaaataa 154504
>dbj|AP003530.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-514H18, complete sequence Length = 205804 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 tgaaaataatacagcagaaaactg 488 |||||||| ||||||||||||||| Sbjct: 25681 tgaaaatactacagcagaaaactg 25658
>dbj|AP001677.1| Homo sapiens genomic DNA, chromosome 21q, section 21/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 taaatgatactttaataaaa 622 |||||||||||||||||||| Sbjct: 63227 taaatgatactttaataaaa 63246
>dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, section 20/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 aatacaatgaaaataataca 477 |||||||||||||||||||| Sbjct: 213186 aatacaatgaaaataataca 213205
>gb|AF063866.1|AF063866 Melanoplus sanguinipes entomopoxvirus, complete genome Length = 236120 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 600 aaataaatgatactttaataaaaa 623 ||||||||||||| |||||||||| Sbjct: 162904 aaataaatgatacattaataaaaa 162927
>gb|AC163271.4| Mus musculus chromosome 7, clone RP24-353E13, complete sequence Length = 131940 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cagaaaactgagaaggtgag 498 |||||||||||||||||||| Sbjct: 43229 cagaaaactgagaaggtgag 43248
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 atgaaaataatacagcagaaaact 487 ||||| |||||||||||||||||| Sbjct: 2133775 atgaagataatacagcagaaaact 2133752
>gb|AC113326.9| Mus musculus chromosome 1, clone RP23-454G7, complete sequence Length = 192734 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 605 aatgatactttaataaaaag 624 |||||||||||||||||||| Sbjct: 61078 aatgatactttaataaaaag 61097
>emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11, COMPLETE SEQUENCE Length = 107624 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 aaaaagggcagcccggtgca 638 |||||||||||||||||||| Sbjct: 27693 aaaaagggcagcccggtgca 27674
>emb|AL731781.23| Mouse DNA sequence from clone RP23-257N12 on chromosome X, complete sequence Length = 137279 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 ttagaatacaatgaaaataa 473 |||||||||||||||||||| Sbjct: 114333 ttagaatacaatgaaaataa 114352
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 ttttccttcaagtaattcca 415 |||||||||||||||||||| Sbjct: 48134 ttttccttcaagtaattcca 48115
>gb|AC134330.3| Mus musculus BAC clone RP24-311K19 from 7, complete sequence Length = 142053 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cagaaaactgagaaggtgag 498 |||||||||||||||||||| Sbjct: 58517 cagaaaactgagaaggtgag 58536
>emb|AL627385.13| Mouse DNA sequence from clone RP23-229I19 on chromosome X, complete sequence Length = 209817 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 ttagaatacaatgaaaataa 473 |||||||||||||||||||| Sbjct: 60378 ttagaatacaatgaaaataa 60359
>gb|AC087575.11| Homo sapiens chromosome 17, clone RP11-305L6, complete sequence Length = 198756 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 ttttaagaatctacaaatgaacat 445 ||||||||||||||||| |||||| Sbjct: 124386 ttttaagaatctacaaaggaacat 124409
>emb|AL772285.9| Mouse DNA sequence from clone RP23-76I24 on chromosome 4, complete sequence Length = 153899 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 gaatacaatgaaaataatac 476 |||||||||||||||||||| Sbjct: 111339 gaatacaatgaaaataatac 111358
>emb|AL133159.5| Mouse DNA sequence from clone CT7-BM332P19 on chromosome 17. Contains eight novel 7 transmembrane receptor (rhodopsin family) (olfactory receptor like) protein genes and three pseudogenes, one or two MHC class I pseudogenes, and GSSs, complete sequence Length = 170749 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tgctattttcctgagtgact 166 |||||||||||||||||||| Sbjct: 142038 tgctattttcctgagtgact 142019
>gb|AC102860.13| Mus musculus chromosome 3, clone RP24-511H12, complete sequence Length = 202315 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 taaagaaccattttccttca 405 |||||||||||||||||||| Sbjct: 54197 taaagaaccattttccttca 54216
>dbj|AP000568.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B753B2, LL56-APP region, complete sequence Length = 136627 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 taaatgatactttaataaaa 622 |||||||||||||||||||| Sbjct: 83002 taaatgatactttaataaaa 83021
>dbj|AP000403.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone:B330A3, complete sequence Length = 160920 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 aatacaatgaaaataataca 477 |||||||||||||||||||| Sbjct: 54585 aatacaatgaaaataataca 54604
>dbj|AP003181.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-94P11, complete sequence Length = 165611 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 tgaaaataatacagcagaaaactg 488 |||||||| ||||||||||||||| Sbjct: 86352 tgaaaatactacagcagaaaactg 86329 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,510,450 Number of Sequences: 3902068 Number of extensions: 8510450 Number of successful extensions: 196071 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 195411 Number of HSP's gapped (non-prelim): 661 length of query: 645 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 622 effective length of database: 17,143,297,704 effective search space: 10663131171888 effective search space used: 10663131171888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
