| Clone Name | rbags39p09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472497.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 552 Score = 607 bits (306), Expect = e-170 Identities = 438/482 (90%) Strand = Plus / Minus Query: 195 ccaccagagctcctgaatgatggctggaagtctgcaggagctccgcctttctcaccacca 254 |||||||||||||| || ||||||||||| || ||||||||||| || |||||||||||| Sbjct: 482 ccaccagagctcctaaaggatggctggaactcagcaggagctccacccttctcaccacca 423 Query: 255 aagtcaccaggtgcaccacgaggaccgccacggtaaccatccctgtcgccatatcttggc 314 ||||||||||| |||||||||||||| |||||||| ||||| ||||| ||| | |||||| Sbjct: 422 aagtcaccaggagcaccacgaggaccaccacggtacccatctctgtcaccaaaccttggc 363 Query: 315 ctgtcaccctcaaaacgaggtggccccctcgggcgatcaccaggtgggccagaaccgagt 374 ||||| || ||||| ||||| || ||||| ||||| || ||||||||||||||||| | | Sbjct: 362 ctgtccccttcaaagcgaggcgggccccttgggcggtcgccaggtgggccagaaccaaat 303 Query: 375 gggcggccaggaggcctggcagattttttgagcgtggcaggcacaatctcagacggcagg 434 ||||||||||| ||||||||||| || ||||| |||||||||||||||||||| |||||| Sbjct: 302 gggcggccaggtggcctggcagacttcttgagtgtggcaggcacaatctcagatggcagg 243 Query: 435 ttgaggaagttgcgcaggaactcaatgccatcgttggtgaggtaccaatagtaatgctgc 494 || ||| ||||||||||| ||||||||||||||||||||||||||| ||||| | |||| Sbjct: 242 ttaaggtagttgcgcaggtgctcaatgccatcgttggtgaggtaccagtagtagtactgc 183 Query: 495 cacgagaaggtctccctgacgtattccttagacttgaagctctgcatgagcttgatcacc 554 || |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 182 caggagaaggtctccctgacgtactccttggacttgaagctctgcatgagcttgatcacc 123 Query: 555 tggaggttcggcacatcaatctgcgggtgcttcgccaggttgtagtccttcttggcatac 614 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 tgcaggttcggcacatcgatctgcgggtgcttcgccaggttgtagtccttcttggcatac 63 Query: 615 agcaccccctcttggaagaggtacttgcaaatctcattgcggttcttcttggagatgatc 674 ||||| ||||||||||||||||||||||| |||||||||||||||||||| | ||||||| Sbjct: 62 agcactccctcttggaagaggtacttgcagatctcattgcggttcttcttcgggatgatc 3 Query: 675 at 676 || Sbjct: 2 at 1
>dbj|AK102190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087A06, full insert sequence Length = 902 Score = 599 bits (302), Expect = e-168 Identities = 437/482 (90%) Strand = Plus / Minus Query: 195 ccaccagagctcctgaatgatggctggaagtctgcaggagctccgcctttctcaccacca 254 |||||||||||||| || ||||||||||| || ||||||||||| || |||||||||||| Sbjct: 575 ccaccagagctcctaaaggatggctggaactcagcaggagctccacccttctcaccacca 516 Query: 255 aagtcaccaggtgcaccacgaggaccgccacggtaaccatccctgtcgccatatcttggc 314 ||||||||||| |||||||||||||| |||||||| ||||| ||||| ||| | |||||| Sbjct: 515 aagtcaccaggagcaccacgaggaccaccacggtacccatctctgtcaccaaaccttggc 456 Query: 315 ctgtcaccctcaaaacgaggtggccccctcgggcgatcaccaggtgggccagaaccgagt 374 ||||| || ||||| ||||| || ||||| ||||| || ||||||||||||||||| | | Sbjct: 455 ctgtccccttcaaagcgaggcgggccccttgggcggtcgccaggtgggccagaaccaaat 396 Query: 375 gggcggccaggaggcctggcagattttttgagcgtggcaggcacaatctcagacggcagg 434 ||||||||||| ||||||||||| || | ||| |||||||||||||||||||| |||||| Sbjct: 395 gggcggccaggtggcctggcagacttctcgagtgtggcaggcacaatctcagatggcagg 336 Query: 435 ttgaggaagttgcgcaggaactcaatgccatcgttggtgaggtaccaatagtaatgctgc 494 || ||| ||||||||||| ||||||||||||||||||||||||||| ||||| | |||| Sbjct: 335 ttaaggtagttgcgcaggtgctcaatgccatcgttggtgaggtaccagtagtagtactgc 276 Query: 495 cacgagaaggtctccctgacgtattccttagacttgaagctctgcatgagcttgatcacc 554 || |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 275 caggagaaggtctccctgacgtactccttggacttgaagctctgcatgagcttgatcacc 216 Query: 555 tggaggttcggcacatcaatctgcgggtgcttcgccaggttgtagtccttcttggcatac 614 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 tgcaggttcggcacatcgatctgcgggtgcttcgccaggttgtagtccttcttggcatac 156 Query: 615 agcaccccctcttggaagaggtacttgcaaatctcattgcggttcttcttggagatgatc 674 ||||| ||||||||||||||||||||||| |||||||||||||||||||| | ||||||| Sbjct: 155 agcactccctcttggaagaggtacttgcagatctcattgcggttcttcttcgggatgatc 96 Query: 675 at 676 || Sbjct: 95 at 94 Score = 52.0 bits (26), Expect = 0.003 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 78 aaaacatcacatccaaactacgaggaagttcactccat 115 ||||||||| |||||||||||| ||||||||||||||| Sbjct: 673 aaaacatcatatccaaactacg-ggaagttcactccat 637
>dbj|AB054123.1| Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein S10, complete cds Length = 756 Score = 567 bits (286), Expect = e-158 Identities = 433/482 (89%) Strand = Plus / Minus Query: 195 ccaccagagctcctgaatgatggctggaagtctgcaggagctccgcctttctcaccacca 254 |||||||||||||| || ||||| ||||| || ||||||||||| || |||||||||||| Sbjct: 573 ccaccagagctcctaaaggatggttggaactcagcaggagctccacccttctcaccacca 514 Query: 255 aagtcaccaggtgcaccacgaggaccgccacggtaaccatccctgtcgccatatcttggc 314 ||||||||||| |||||||||||||| |||||||| ||||| ||||| ||| | |||||| Sbjct: 513 aagtcaccaggagcaccacgaggaccaccacggtacccatctctgtcaccaaaccttggc 454 Query: 315 ctgtcaccctcaaaacgaggtggccccctcgggcgatcaccaggtgggccagaaccgagt 374 ||||| || ||||| ||||| || ||||| || || || ||||||||||||||||| | | Sbjct: 453 ctgtccccttcaaagcgaggcgggccccttggacggtcgccaggtgggccagaaccaaat 394 Query: 375 gggcggccaggaggcctggcagattttttgagcgtggcaggcacaatctcagacggcagg 434 ||||| ||||| ||||||||||| || ||||| |||||||||||||||||||| |||||| Sbjct: 393 gggcgaccaggtggcctggcagacttcttgagtgtggcaggcacaatctcagatggcagg 334 Query: 435 ttgaggaagttgcgcaggaactcaatgccatcgttggtgaggtaccaatagtaatgctgc 494 || ||| ||||| ||||| ||||||||||||||||||||||||||| ||||| | |||| Sbjct: 333 ttaaggtagttgagcaggtgctcaatgccatcgttggtgaggtaccagtagtagtactgc 274 Query: 495 cacgagaaggtctccctgacgtattccttagacttgaagctctgcatgagcttgatcacc 554 || |||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 273 caggagaaggtctccctgacgtactccttggacttgaagctctgcatgaacttgatcacc 214 Query: 555 tggaggttcggcacatcaatctgcgggtgcttcgccaggttgtagtccttcttggcatac 614 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 tgcaggttcggcacatcgatctgcgggtgcttcgccaggttgtagtccttcttggcatac 154 Query: 615 agcaccccctcttggaagaggtacttgcaaatctcattgcggttcttcttggagatgatc 674 ||||| ||||||||||||||||||||||| |||||||||||||||||||| | ||||||| Sbjct: 153 agcactccctcttggaagaggtacttgcagatctcattgcggttcttcttcgggatgatc 94 Query: 675 at 676 || Sbjct: 93 at 92
>gb|AY103548.1| Zea mays PCO091529 mRNA sequence Length = 1541 Score = 517 bits (261), Expect = e-143 Identities = 420/473 (88%) Strand = Plus / Minus Query: 204 ctcctgaatgatggctggaagtctgcaggagctccgcctttctcaccaccaaagtcacca 263 |||||||||||||||||||| || ||||||||||| | || || ||||||||||||||| Sbjct: 719 ctcctgaatgatggctggaactcagcaggagctccactcttatcgccaccaaagtcacca 660 Query: 264 ggtgcaccacgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccc 323 || |||||||||||||| |||||||| |||||||||| ||| | ||||||||||| || Sbjct: 659 ggagcaccacgaggaccaccacggtactcatccctgtcaccaaaccttggcctgtcgccg 600 Query: 324 tcaaaacgaggtggccccctcgggcgatcaccaggtgggccagaaccgagtgggcggcca 383 ||||||||| ||| ||||| ||||| |||||||| |||||||| || | |||||||||| Sbjct: 599 tcaaaacgacctgggccccttgggcggtcaccaggagggccagagccaaatgggcggcca 540 Query: 384 ggaggcctggcagattttttgagcgtggcaggcacaatctcagacggcaggttgaggaag 443 || ||| ||||||| || ||||||||||||||||| ||||||||||| ||||| ||| || Sbjct: 539 ggtggcttggcagacttcttgagcgtggcaggcacgatctcagacgggaggttcaggtag 480 Query: 444 ttgcgcaggaactcaatgccatcgttggtgaggtaccaatagtaatgctgccacgagaag 503 ||||| ||| ||||||||||||||||||||| ||||| ||||| | |||||| |||||| Sbjct: 479 ttgcgtaggtgctcaatgccatcgttggtgagataccagtagtagtactgccaggagaag 420 Query: 504 gtctccctgacgtattccttagacttgaagctctgcatgagcttgatcacctggaggttc 563 |||||||| || || ||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 419 gtctccctaacatactccttggacttaaagctctgcatgagcttgatcacctggaggttg 360 Query: 564 ggcacatcaatctgcgggtgcttcgccaggttgtagtccttcttggcatacagcaccccc 623 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 359 ggcacatcgatctgcgggtgcttcgccaggttgtagtccttcttggcatacagcacgccc 300 Query: 624 tcttggaagaggtacttgcaaatctcattgcggttcttcttggagatgatcat 676 || | ||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 299 tccttgaagaggtacttgcagatctcattgcggttcttcttggggatgatcat 247 Score = 250 bits (126), Expect = 5e-63 Identities = 156/166 (93%) Strand = Plus / Minus Query: 455 ctcaatgccatcgttggtgaggtaccaatagtaatgctgccacgagaaggtctccctgac 514 ||||||||||||||||||||||||||| ||||| | |||||| ||||||||||| ||||| Sbjct: 181 ctcaatgccatcgttggtgaggtaccagtagtagtactgccaggagaaggtctctctgac 122 Query: 515 gtattccttagacttgaagctctgcatgagcttgatcacctggaggttcggcacatcaat 574 || ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 121 atactccttggacttgaagctctgcatgagcttgatcacctggaggttgggcacatcaat 62 Query: 575 ctgcgggtgcttcgccaggttgtagtccttcttggcatacagcacc 620 ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ctgtgggtgcttcgccaggttgtagtccttcttggcatacagcacc 16
>gb|BT019280.1| Zea mays clone Contig953.F mRNA sequence Length = 872 Score = 470 bits (237), Expect = e-129 Identities = 419/479 (87%), Gaps = 3/479 (0%) Strand = Plus / Plus Query: 198 ccagagctcctgaatgatggctggaagtctgcaggagctccgcctttctcaccaccaaag 257 ||||| |||||||| ||||||||||| || ||||||||||| | || || ||||| ||| Sbjct: 317 ccagaactcctgaaagatggctggaactcagcaggagctccactcttatcgccaccgaag 376 Query: 258 tcaccaggtgcaccacgaggaccgccacggtaaccatccctgtcgccatatcttggcctg 317 |||||||| |||||||||||||| |||||||| |||||||||| ||| | ||||| ||| Sbjct: 377 tcaccaggagcaccacgaggaccaccacggtactcatccctgtctccaaaccttggtctg 436 Query: 318 tcaccctcaaaacgaggtggccccctcgggcgatcaccaggtgggccagaaccgagtggg 377 || ||||||||| || ||||| ||||| |||||||| |||||||| || | ||| Sbjct: 437 tct---tcaaaacgaccagggccccttgggcggtcaccaggagggccagagccaaatgga 493 Query: 378 cggccaggaggcctggcagattttttgagcgtggcaggcacaatctcagacggcaggttg 437 ||||| | ||||||||||| || ||||||||||||||||| ||||||||||| ||||| Sbjct: 494 cggcccagtggcctggcagacttcttgagcgtggcaggcacgatctcagacgggaggttc 553 Query: 438 aggaagttgcgcaggaactcaatgccatcgttggtgaggtaccaatagtaatgctgccac 497 ||| ||||||| ||| ||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 554 aggtagttgcgtaggtgctcaatgccatcgttggtgaggtaccagtagtagtactgccag 613 Query: 498 gagaaggtctccctgacgtattccttagacttgaagctctgcatgagcttgatcacctgg 557 ||||||||||| ||||| || ||||| ||||||||||||||||||||||||||||||||| Sbjct: 614 gagaaggtctctctgacatactccttggacttgaagctctgcatgagcttgatcacctgg 673 Query: 558 aggttcggcacatcaatctgcgggtgcttcgccaggttgtagtccttcttggcatacagc 617 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 674 aggttgggcacatcaatctgtgggtgcttcgccaggttgtagtccttcttggcatacagc 733 Query: 618 accccctcttggaagaggtacttgcaaatctcattgcggttcttcttggagatgatcat 676 || ||||| | ||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 734 acgccctccttgaagaggtacttgcagatctcattgcggttcttcttggggatgatcat 792
>ref|XM_466144.1| Oryza sativa (japonica cultivar-group), mRNA Length = 853 Score = 448 bits (226), Expect = e-122 Identities = 418/482 (86%) Strand = Plus / Minus Query: 195 ccaccagagctcctgaatgatggctggaagtctgcaggagctccgcctttctcaccacca 254 |||||||| |||||||||||||||||||| ||||||||||| || || |||||||||||| Sbjct: 562 ccaccagaactcctgaatgatggctggaattctgcaggagcaccacccttctcaccacca 503 Query: 255 aagtcaccaggtgcaccacgaggaccgccacggtaaccatccctgtcgccatatcttggc 314 || |||||||| ||||||||||| || |||||||| ||||||| ||| ||| | ||||| Sbjct: 502 aaatcaccaggcgcaccacgaggtccaccacggtagccatcccggtctccaaaccttggt 443 Query: 315 ctgtcaccctcaaaacgaggtggccccctcgggcgatcaccaggtgggccagaaccgagt 374 ||||| || || || |||||||| ||||| |||||||||||||| |||||||| || | | Sbjct: 442 ctgtccccttcgaaccgaggtgggccccttgggcgatcaccaggggggccagagccaaat 383 Query: 375 gggcggccaggaggcctggcagattttttgagcgtggcaggcacaatctcagacggcagg 434 |||||||| || ||||| ||||| || ||||| || ||||| |||||||||||||||| | Sbjct: 382 gggcggcctggtggccttgcagacttcttgagtgtagcaggtacaatctcagacggcaag 323 Query: 435 ttgaggaagttgcgcaggaactcaatgccatcgttggtgaggtaccaatagtaatgctgc 494 || ||| | || | |||| |||||||||||| || ||||||||||| ||||| | |||| Sbjct: 322 ttaaggtaattcctcaggtgctcaatgccatcattagtgaggtaccagtagtagtactgc 263 Query: 495 cacgagaaggtctccctgacgtattccttagacttgaagctctgcatgagcttgatcacc 554 || ||||||||||||||||| || ||||| |||||||||||||||||||||||||| ||| Sbjct: 262 caggagaaggtctccctgacatactccttggacttgaagctctgcatgagcttgatgacc 203 Query: 555 tggaggttcggcacatcaatctgcgggtgcttcgccaggttgtagtccttcttggcatac 614 || ||||| |||||||||||||| ||||| || |||| ||||||||||||||||| ||| Sbjct: 202 tgaaggtttggcacatcaatctgtgggtgttttgccaaattgtagtccttcttggcgtac 143 Query: 615 agcaccccctcttggaagaggtacttgcaaatctcattgcggttcttcttggagatgatc 674 | |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| Sbjct: 142 aaaaccccctcttggaagaggtacttgcagatctcattccggttcttcttggggatgatc 83 Query: 675 at 676 || Sbjct: 82 at 81
>dbj|AK066564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073I17, full insert sequence Length = 853 Score = 448 bits (226), Expect = e-122 Identities = 418/482 (86%) Strand = Plus / Minus Query: 195 ccaccagagctcctgaatgatggctggaagtctgcaggagctccgcctttctcaccacca 254 |||||||| |||||||||||||||||||| ||||||||||| || || |||||||||||| Sbjct: 562 ccaccagaactcctgaatgatggctggaattctgcaggagcaccacccttctcaccacca 503 Query: 255 aagtcaccaggtgcaccacgaggaccgccacggtaaccatccctgtcgccatatcttggc 314 || |||||||| ||||||||||| || |||||||| ||||||| ||| ||| | ||||| Sbjct: 502 aaatcaccaggcgcaccacgaggtccaccacggtagccatcccggtctccaaaccttggt 443 Query: 315 ctgtcaccctcaaaacgaggtggccccctcgggcgatcaccaggtgggccagaaccgagt 374 ||||| || || || |||||||| ||||| |||||||||||||| |||||||| || | | Sbjct: 442 ctgtccccttcgaaccgaggtgggccccttgggcgatcaccaggggggccagagccaaat 383 Query: 375 gggcggccaggaggcctggcagattttttgagcgtggcaggcacaatctcagacggcagg 434 |||||||| || ||||| ||||| || ||||| || ||||| |||||||||||||||| | Sbjct: 382 gggcggcctggtggccttgcagacttcttgagtgtagcaggtacaatctcagacggcaag 323 Query: 435 ttgaggaagttgcgcaggaactcaatgccatcgttggtgaggtaccaatagtaatgctgc 494 || ||| | || | |||| |||||||||||| || ||||||||||| ||||| | |||| Sbjct: 322 ttaaggtaattcctcaggtgctcaatgccatcattagtgaggtaccagtagtagtactgc 263 Query: 495 cacgagaaggtctccctgacgtattccttagacttgaagctctgcatgagcttgatcacc 554 || ||||||||||||||||| || ||||| |||||||||||||||||||||||||| ||| Sbjct: 262 caggagaaggtctccctgacatactccttggacttgaagctctgcatgagcttgatgacc 203 Query: 555 tggaggttcggcacatcaatctgcgggtgcttcgccaggttgtagtccttcttggcatac 614 || ||||| |||||||||||||| ||||| || |||| ||||||||||||||||| ||| Sbjct: 202 tgaaggtttggcacatcaatctgtgggtgttttgccaaattgtagtccttcttggcgtac 143 Query: 615 agcaccccctcttggaagaggtacttgcaaatctcattgcggttcttcttggagatgatc 674 | |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| Sbjct: 142 aaaaccccctcttggaagaggtacttgcagatctcattccggttcttcttggggatgatc 83 Query: 675 at 676 || Sbjct: 82 at 81
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 385 bits (194), Expect = e-103 Identities = 260/282 (92%) Strand = Plus / Minus Query: 345 gggcgatcaccaggtgggccagaaccgagtgggcggccaggaggcctggcagattttttg 404 ||||| || ||||||||||||||||| | |||||||||||| ||||||||||| || ||| Sbjct: 152441 gggcggtcgccaggtgggccagaaccaaatgggcggccaggtggcctggcagacttcttg 152382 Query: 405 agcgtggcaggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatgcca 464 || |||||||||||||||||||| |||||||| ||| ||||||||||| |||||||||| Sbjct: 152381 agtgtggcaggcacaatctcagatggcaggttaaggtagttgcgcaggtgctcaatgcca 152322 Query: 465 tcgttggtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattcctta 524 ||||||||||||||||| ||||| | |||||| |||||||||||||||||||| ||||| Sbjct: 152321 tcgttggtgaggtaccagtagtagtactgccaggagaaggtctccctgacgtactccttg 152262 Query: 525 gacttgaagctctgcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgc 584 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 152261 gacttgaagctctgcatgagcttgatcacctgcaggttcggcacatcgatctgcgggtgc 152202 Query: 585 ttcgccaggttgtagtccttcttggcatacagcaccccctct 626 ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 152201 ttcgccaggttgtagtccttcttggcatacagcactccctct 152160 Score = 133 bits (67), Expect = 9e-28 Identities = 115/131 (87%) Strand = Plus / Minus Query: 213 gatggctggaagtctgcaggagctccgcctttctcaccaccaaagtcaccaggtgcacca 272 ||||||||||| || ||||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 153172 gatggctggaactcagcaggagctccacccttctcaccaccaaagtcaccaggagcacca 153113 Query: 273 cgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccctcaaaacga 332 |||||||| |||||||| ||||| ||||| ||| | ||||||||||| || ||||| ||| Sbjct: 153112 cgaggaccaccacggtacccatctctgtcaccaaaccttggcctgtccccttcaaagcga 153053 Query: 333 ggtggccccct 343 || || ||||| Sbjct: 153052 ggcgggcccct 153042 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 625 cttggaagaggtacttgcaaatctcattgcggttcttcttggagatgatc 674 ||||||||||||||||||| |||||||||||||||||||| | ||||||| Sbjct: 151714 cttggaagaggtacttgcagatctcattgcggttcttcttcgggatgatc 151665 Score = 52.0 bits (26), Expect = 0.003 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 78 aaaacatcacatccaaactacgaggaagttcactccat 115 ||||||||| |||||||||||| ||||||||||||||| Sbjct: 153789 aaaacatcatatccaaactacg-ggaagttcactccat 153753
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 385 bits (194), Expect = e-103 Identities = 260/282 (92%) Strand = Plus / Minus Query: 345 gggcgatcaccaggtgggccagaaccgagtgggcggccaggaggcctggcagattttttg 404 ||||| || ||||||||||||||||| | |||||||||||| ||||||||||| || ||| Sbjct: 21338967 gggcggtcgccaggtgggccagaaccaaatgggcggccaggtggcctggcagacttcttg 21338908 Query: 405 agcgtggcaggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatgcca 464 || |||||||||||||||||||| |||||||| ||| ||||||||||| |||||||||| Sbjct: 21338907 agtgtggcaggcacaatctcagatggcaggttaaggtagttgcgcaggtgctcaatgcca 21338848 Query: 465 tcgttggtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattcctta 524 ||||||||||||||||| ||||| | |||||| |||||||||||||||||||| ||||| Sbjct: 21338847 tcgttggtgaggtaccagtagtagtactgccaggagaaggtctccctgacgtactccttg 21338788 Query: 525 gacttgaagctctgcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgc 584 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 21338787 gacttgaagctctgcatgagcttgatcacctgcaggttcggcacatcgatctgcgggtgc 21338728 Query: 585 ttcgccaggttgtagtccttcttggcatacagcaccccctct 626 ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 21338727 ttcgccaggttgtagtccttcttggcatacagcactccctct 21338686 Score = 133 bits (67), Expect = 9e-28 Identities = 115/131 (87%) Strand = Plus / Minus Query: 213 gatggctggaagtctgcaggagctccgcctttctcaccaccaaagtcaccaggtgcacca 272 ||||||||||| || ||||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 21339698 gatggctggaactcagcaggagctccacccttctcaccaccaaagtcaccaggagcacca 21339639 Query: 273 cgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccctcaaaacga 332 |||||||| |||||||| ||||| ||||| ||| | ||||||||||| || ||||| ||| Sbjct: 21339638 cgaggaccaccacggtacccatctctgtcaccaaaccttggcctgtccccttcaaagcga 21339579 Query: 333 ggtggccccct 343 || || ||||| Sbjct: 21339578 ggcgggcccct 21339568 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 625 cttggaagaggtacttgcaaatctcattgcggttcttcttggagatgatc 674 ||||||||||||||||||| |||||||||||||||||||| | ||||||| Sbjct: 21338240 cttggaagaggtacttgcagatctcattgcggttcttcttcgggatgatc 21338191 Score = 52.0 bits (26), Expect = 0.003 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 78 aaaacatcacatccaaactacgaggaagttcactccat 115 ||||||||| |||||||||||| ||||||||||||||| Sbjct: 21340315 aaaacatcatatccaaactacg-ggaagttcactccat 21340279
>ref|NM_189370.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 540 Score = 357 bits (180), Expect = 3e-95 Identities = 393/464 (84%) Strand = Plus / Minus Query: 213 gatggctggaagtctgcaggagctccgcctttctcaccaccaaagtcaccaggtgcacca 272 ||||||||||| || || ||||| || || ||||| |||||||| ||||| || |||||| Sbjct: 464 gatggctggaactcagctggagcaccacccttctcgccaccaaaatcacctggagcacca 405 Query: 273 cgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccctcaaaacga 332 || || || || | ||||||||||||||| ||| | || ||||||||||||||||| ||| Sbjct: 404 cgtgggccacccctgtaaccatccctgtcaccaaacctgggcctgtcaccctcaaagcga 345 Query: 333 ggtggccccctcgggcgatcaccaggtgggccagaaccgagtgggcggccaggaggcctg 392 || || || || ||||| |||||||| |||||||| |||| |||||| || ||| || Sbjct: 344 ggcgggcctctggggcggtcaccaggagggccagagccgaatgggcgagacgggggcttg 285 Query: 393 gcagattttttgagcgtggcaggcacaatctcagacggcaggttgaggaagttgcgcagg 452 ||||| || ||||| ||| |||||||| |||||| |||||||||||| || |||| ||| Sbjct: 284 gcagacttcttgagggtgttaggcacaacctcagatggcaggttgaggtagctgcggagg 225 Query: 453 aactcaatgccatcgttggtgaggtaccaatagtaatgctgccacgagaaggtctccctg 512 |||||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct: 224 tgctcaatgccatcattggtcaggtaccagtagtagtgctgccacgagaaggtctccctc 165 Query: 513 acgtattccttagacttgaagctctgcatgagcttgatcacctggaggttcggcacatca 572 || || ||||| ||||||||||||||||||||||| ||||||| | ||| ||||||||| Sbjct: 164 acatactcctttgacttgaagctctgcatgagcttaatcacctccaagttgggcacatca 105 Query: 573 atctgcgggtgcttcgccaggttgtagtccttcttggcatacagcaccccctcttggaag 632 | || |||||||| |||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 104 acctttgggtgcttggccaggttgtagtccttcttggcatacaagactccctcatggaag 45 Query: 633 aggtacttgcaaatctcattgcggttcttcttggagatgatcat 676 ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 44 aggtacttgcagatctcgcggcggttcttcttggagatgatcat 1
>dbj|AK073846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070I05, full insert sequence Length = 900 Score = 349 bits (176), Expect = 8e-93 Identities = 392/464 (84%) Strand = Plus / Minus Query: 213 gatggctggaagtctgcaggagctccgcctttctcaccaccaaagtcaccaggtgcacca 272 ||||||||||| || || ||||| || || ||||| |||||||| ||||| || |||||| Sbjct: 552 gatggctggaactcagctggagcaccacccttctcgccaccaaaatcacctggagcacca 493 Query: 273 cgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccctcaaaacga 332 || || || || | ||||||||||||||| ||| | || ||||||||||||||||| ||| Sbjct: 492 cgtgggccacccctgtaaccatccctgtcaccaaacctgggcctgtcaccctcaaagcga 433 Query: 333 ggtggccccctcgggcgatcaccaggtgggccagaaccgagtgggcggccaggaggcctg 392 || || || || ||||| |||||||| |||||||| |||| |||||| || ||| || Sbjct: 432 ggcgggcctctggggcggtcaccaggagggccagagccgaatgggcgagacgggggcttg 373 Query: 393 gcagattttttgagcgtggcaggcacaatctcagacggcaggttgaggaagttgcgcagg 452 ||||| || ||||| ||| |||||||| |||||| |||||||||||| || |||| ||| Sbjct: 372 gcagacttcttgagggtgttaggcacaacctcagatggcaggttgaggtagctgcggagg 313 Query: 453 aactcaatgccatcgttggtgaggtaccaatagtaatgctgccacgagaaggtctccctg 512 |||||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct: 312 tgctcaatgccatcattggtcaggtaccagtagtagtgctgccacgagaaggtctccctc 253 Query: 513 acgtattccttagacttgaagctctgcatgagcttgatcacctggaggttcggcacatca 572 || || ||||| ||||||||||||||||||||||| ||||||| | ||| ||||||||| Sbjct: 252 acatactcctttgacttgaagctctgcatgagcttaatcacctccaagttgggcacatca 193 Query: 573 atctgcgggtgcttcgccaggttgtagtccttcttggcatacagcaccccctcttggaag 632 | || |||||||| |||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 192 acctttgggtgcttggccaggttgtagtccttcttggcatacaagactccctcatggaag 133 Query: 633 aggtacttgcaaatctcattgcggttcttcttggagatgatcat 676 ||||||||||| ||||| ||||||||||||| |||||||||| Sbjct: 132 aggtacttgcagatctcgcggcggttcttcttgcagatgatcat 89
>gb|BT016501.1| Zea mays clone Contig334 mRNA sequence Length = 841 Score = 283 bits (143), Expect = 4e-73 Identities = 233/263 (88%) Strand = Plus / Minus Query: 414 ggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatgccatcgttggtg 473 ||||||| ||| |||||||||||||||||| |||| ||| ||||||||||||||||||| Sbjct: 326 ggcacaacctctgacggcaggttgaggaagctgcggaggtgctcaatgccatcgttggtg 267 Query: 474 aggtaccaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaag 533 |||||||| ||||| | |||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 266 aggtaccagtagtagtactgccaggagaaggtctccctgacatactccttggacttgaag 207 Query: 534 ctctgcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgcttcgccagg 593 |||||||||||||| ||||||| ||||| ||||| |||| || |||||||| |||||| Sbjct: 206 ctctgcatgagcttaatcacctccaggttgggcacgtcaagcttggggtgcttggccagg 147 Query: 594 ttgtagtccttcttggcatacagcaccccctcttggaagaggtacttgcaaatctcattg 653 |||||||||||||||||||| || |||||||| ||||||| ||||||||| ||||| | Sbjct: 146 ttgtagtccttcttggcatatagaaccccctcatggaagatgtacttgcagatctcgcgg 87 Query: 654 cggttcttcttggagatgatcat 676 ||||||||||||||||||||||| Sbjct: 86 cggttcttcttggagatgatcat 64 Score = 69.9 bits (35), Expect = 1e-08 Identities = 125/155 (80%) Strand = Plus / Minus Query: 213 gatggctggaagtctgcaggagctccgcctttctcaccaccaaagtcaccaggtgcacca 272 ||||||||||| || |||||||| | || |||||||||||||| ||||| |||||| Sbjct: 527 gatggctggaaatccgcaggagcactacccttctcaccaccaaaatcacccattgcacct 468 Query: 273 cgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccctcaaaacga 332 || ||||| || | |||||||||||| || ||| | || || ||||| || |||| ||| Sbjct: 467 cgtggacctcctctgtaaccatccctatccccaaacctaggtctgtcttccccaaagcga 408 Query: 333 ggtggccccctcgggcgatcaccaggtgggccaga 367 || || ||||| ||||| ||||| ||||||||||| Sbjct: 407 gggggacccctggggcggtcacccggtgggccaga 373
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 242 bits (122), Expect = 1e-60 Identities = 242/282 (85%) Strand = Plus / Minus Query: 345 gggcgatcaccaggtgggccagaaccgagtgggcggccaggaggcctggcagattttttg 404 |||||||||||||| |||||||| || | ||||||||| || ||||| ||||| || ||| Sbjct: 20669959 gggcgatcaccaggggggccagagccaaatgggcggcctggtggccttgcagacttcttg 20669900 Query: 405 agcgtggcaggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatgcca 464 || || ||||| |||||||||||||||| ||| ||| | || | |||| |||||||||| Sbjct: 20669899 agtgtagcaggtacaatctcagacggcaagttaaggtaattcctcaggtgctcaatgcca 20669840 Query: 465 tcgttggtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattcctta 524 || || ||||||||||| ||||| | |||||| ||||||||||||||||| || ||||| Sbjct: 20669839 tcattagtgaggtaccagtagtagtactgccaggagaaggtctccctgacatactccttg 20669780 Query: 525 gacttgaagctctgcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgc 584 |||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||| Sbjct: 20669779 gacttgaagctctgcatgagcttgatgacctgaaggtttggcacatcaatctgtgggtgt 20669720 Query: 585 ttcgccaggttgtagtccttcttggcatacagcaccccctct 626 || |||| ||||||||||||||||| |||| ||||||||| Sbjct: 20669719 tttgccaaattgtagtccttcttggcgtacaaaaccccctct 20669678 Score = 123 bits (62), Expect = 8e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 206 cctgaatgatggctggaagtctgcaggagctccgcctttctcaccaccaaagtcaccagg 265 |||||||||||||||||| ||||||||||| || || |||||||||||||| |||||||| Sbjct: 20670661 cctgaatgatggctggaattctgcaggagcaccacccttctcaccaccaaaatcaccagg 20670602 Query: 266 tgcaccacgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccctc 325 ||||||||||| || |||||||| ||||||| ||| ||| | ||||| ||||| || || Sbjct: 20670601 cgcaccacgaggtccaccacggtagccatcccggtctccaaaccttggtctgtccccttc 20670542 Query: 326 aaaacgaggtggccccct 343 || |||||||| ||||| Sbjct: 20670541 gaaccgaggtgggcccct 20670524 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 625 cttggaagaggtacttgcaaatctcattgcggttcttcttggagatgatc 674 ||||||||||||||||||| |||||||| ||||||||||||| ||||||| Sbjct: 20669198 cttggaagaggtacttgcagatctcattccggttcttcttggggatgatc 20669149
>dbj|AP004775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0451A10 Length = 137046 Score = 242 bits (122), Expect = 1e-60 Identities = 242/282 (85%) Strand = Plus / Minus Query: 345 gggcgatcaccaggtgggccagaaccgagtgggcggccaggaggcctggcagattttttg 404 |||||||||||||| |||||||| || | ||||||||| || ||||| ||||| || ||| Sbjct: 21065 gggcgatcaccaggggggccagagccaaatgggcggcctggtggccttgcagacttcttg 21006 Query: 405 agcgtggcaggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatgcca 464 || || ||||| |||||||||||||||| ||| ||| | || | |||| |||||||||| Sbjct: 21005 agtgtagcaggtacaatctcagacggcaagttaaggtaattcctcaggtgctcaatgcca 20946 Query: 465 tcgttggtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattcctta 524 || || ||||||||||| ||||| | |||||| ||||||||||||||||| || ||||| Sbjct: 20945 tcattagtgaggtaccagtagtagtactgccaggagaaggtctccctgacatactccttg 20886 Query: 525 gacttgaagctctgcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgc 584 |||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||| Sbjct: 20885 gacttgaagctctgcatgagcttgatgacctgaaggtttggcacatcaatctgtgggtgt 20826 Query: 585 ttcgccaggttgtagtccttcttggcatacagcaccccctct 626 || |||| ||||||||||||||||| |||| ||||||||| Sbjct: 20825 tttgccaaattgtagtccttcttggcgtacaaaaccccctct 20784 Score = 123 bits (62), Expect = 8e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 206 cctgaatgatggctggaagtctgcaggagctccgcctttctcaccaccaaagtcaccagg 265 |||||||||||||||||| ||||||||||| || || |||||||||||||| |||||||| Sbjct: 21767 cctgaatgatggctggaattctgcaggagcaccacccttctcaccaccaaaatcaccagg 21708 Query: 266 tgcaccacgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccctc 325 ||||||||||| || |||||||| ||||||| ||| ||| | ||||| ||||| || || Sbjct: 21707 cgcaccacgaggtccaccacggtagccatcccggtctccaaaccttggtctgtccccttc 21648 Query: 326 aaaacgaggtggccccct 343 || |||||||| ||||| Sbjct: 21647 gaaccgaggtgggcccct 21630 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 625 cttggaagaggtacttgcaaatctcattgcggttcttcttggagatgatc 674 ||||||||||||||||||| |||||||| ||||||||||||| ||||||| Sbjct: 20304 cttggaagaggtacttgcagatctcattccggttcttcttggggatgatc 20255
>dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0040I22 Length = 134273 Score = 242 bits (122), Expect = 1e-60 Identities = 242/282 (85%) Strand = Plus / Minus Query: 345 gggcgatcaccaggtgggccagaaccgagtgggcggccaggaggcctggcagattttttg 404 |||||||||||||| |||||||| || | ||||||||| || ||||| ||||| || ||| Sbjct: 66814 gggcgatcaccaggggggccagagccaaatgggcggcctggtggccttgcagacttcttg 66755 Query: 405 agcgtggcaggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatgcca 464 || || ||||| |||||||||||||||| ||| ||| | || | |||| |||||||||| Sbjct: 66754 agtgtagcaggtacaatctcagacggcaagttaaggtaattcctcaggtgctcaatgcca 66695 Query: 465 tcgttggtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattcctta 524 || || ||||||||||| ||||| | |||||| ||||||||||||||||| || ||||| Sbjct: 66694 tcattagtgaggtaccagtagtagtactgccaggagaaggtctccctgacatactccttg 66635 Query: 525 gacttgaagctctgcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgc 584 |||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||| Sbjct: 66634 gacttgaagctctgcatgagcttgatgacctgaaggtttggcacatcaatctgtgggtgt 66575 Query: 585 ttcgccaggttgtagtccttcttggcatacagcaccccctct 626 || |||| ||||||||||||||||| |||| ||||||||| Sbjct: 66574 tttgccaaattgtagtccttcttggcgtacaaaaccccctct 66533 Score = 123 bits (62), Expect = 8e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 206 cctgaatgatggctggaagtctgcaggagctccgcctttctcaccaccaaagtcaccagg 265 |||||||||||||||||| ||||||||||| || || |||||||||||||| |||||||| Sbjct: 67516 cctgaatgatggctggaattctgcaggagcaccacccttctcaccaccaaaatcaccagg 67457 Query: 266 tgcaccacgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccctc 325 ||||||||||| || |||||||| ||||||| ||| ||| | ||||| ||||| || || Sbjct: 67456 cgcaccacgaggtccaccacggtagccatcccggtctccaaaccttggtctgtccccttc 67397 Query: 326 aaaacgaggtggccccct 343 || |||||||| ||||| Sbjct: 67396 gaaccgaggtgggcccct 67379 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 625 cttggaagaggtacttgcaaatctcattgcggttcttcttggagatgatc 674 ||||||||||||||||||| |||||||| ||||||||||||| ||||||| Sbjct: 66053 cttggaagaggtacttgcagatctcattccggttcttcttggggatgatc 66004
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 228 bits (115), Expect = 2e-56 Identities = 232/271 (85%) Strand = Plus / Plus Query: 345 gggcgatcaccaggtgggccagaaccgagtgggcggccaggaggcctggcagattttttg 404 ||||| |||||||| |||||||| |||| |||||| || ||| ||||||| || ||| Sbjct: 42418829 gggcggtcaccaggagggccagagccgaatgggcgagacgggggcttggcagacttcttg 42418888 Query: 405 agcgtggcaggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatgcca 464 || ||| |||||||| |||||| |||||||||||| || |||| ||| |||||||||| Sbjct: 42418889 agggtgttaggcacaacctcagatggcaggttgaggtagctgcggaggtgctcaatgcca 42418948 Query: 465 tcgttggtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattcctta 524 || ||||| |||||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 42418949 tcattggtcaggtaccagtagtagtgctgccacgagaaggtctccctcacatactccttt 42419008 Query: 525 gacttgaagctctgcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgc 584 ||||||||||||||||||||||| ||||||| | ||| |||||||||| || |||||| Sbjct: 42419009 gacttgaagctctgcatgagcttaatcacctccaagttgggcacatcaacctttgggtgc 42419068 Query: 585 ttcgccaggttgtagtccttcttggcataca 615 || |||||||||||||||||||||||||||| Sbjct: 42419069 ttggccaggttgtagtccttcttggcataca 42419099 Score = 83.8 bits (42), Expect = 7e-13 Identities = 102/122 (83%) Strand = Plus / Plus Query: 213 gatggctggaagtctgcaggagctccgcctttctcaccaccaaagtcaccaggtgcacca 272 ||||||||||| || || ||||| || || ||||| |||||||| ||||| || |||||| Sbjct: 42418214 gatggctggaactcagctggagcaccacccttctcgccaccaaaatcacctggagcacca 42418273 Query: 273 cgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccctcaaaacga 332 || || || || | ||||||||||||||| ||| | || ||||||||||||||||| ||| Sbjct: 42418274 cgtgggccacccctgtaaccatccctgtcaccaaacctgggcctgtcaccctcaaagcga 42418333 Query: 333 gg 334 || Sbjct: 42418334 gg 42418335 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 627 tggaagaggtacttgcaaatctcattgcggttcttcttggagatgatc 674 ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 42419461 tggaagaggtacttgcagatctcgcggcggttcttcttggagatgatc 42419508 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ggttgaggaagttgcgcagg 452 |||||||||||||||||||| Sbjct: 19807898 ggttgaggaagttgcgcagg 19807879
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 228 bits (115), Expect = 2e-56 Identities = 232/271 (85%) Strand = Plus / Plus Query: 345 gggcgatcaccaggtgggccagaaccgagtgggcggccaggaggcctggcagattttttg 404 ||||| |||||||| |||||||| |||| |||||| || ||| ||||||| || ||| Sbjct: 78167 gggcggtcaccaggagggccagagccgaatgggcgagacgggggcttggcagacttcttg 78226 Query: 405 agcgtggcaggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatgcca 464 || ||| |||||||| |||||| |||||||||||| || |||| ||| |||||||||| Sbjct: 78227 agggtgttaggcacaacctcagatggcaggttgaggtagctgcggaggtgctcaatgcca 78286 Query: 465 tcgttggtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattcctta 524 || ||||| |||||||| ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 78287 tcattggtcaggtaccagtagtagtgctgccacgagaaggtctccctcacatactccttt 78346 Query: 525 gacttgaagctctgcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgc 584 ||||||||||||||||||||||| ||||||| | ||| |||||||||| || |||||| Sbjct: 78347 gacttgaagctctgcatgagcttaatcacctccaagttgggcacatcaacctttgggtgc 78406 Query: 585 ttcgccaggttgtagtccttcttggcataca 615 || |||||||||||||||||||||||||||| Sbjct: 78407 ttggccaggttgtagtccttcttggcataca 78437 Score = 83.8 bits (42), Expect = 7e-13 Identities = 102/122 (83%) Strand = Plus / Plus Query: 213 gatggctggaagtctgcaggagctccgcctttctcaccaccaaagtcaccaggtgcacca 272 ||||||||||| || || ||||| || || ||||| |||||||| ||||| || |||||| Sbjct: 77552 gatggctggaactcagctggagcaccacccttctcgccaccaaaatcacctggagcacca 77611 Query: 273 cgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccctcaaaacga 332 || || || || | ||||||||||||||| ||| | || ||||||||||||||||| ||| Sbjct: 77612 cgtgggccacccctgtaaccatccctgtcaccaaacctgggcctgtcaccctcaaagcga 77671 Query: 333 gg 334 || Sbjct: 77672 gg 77673 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 627 tggaagaggtacttgcaaatctcattgcggttcttcttggagatgatc 674 ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 78799 tggaagaggtacttgcagatctcgcggcggttcttcttggagatgatc 78846
>gb|BT017535.1| Zea mays clone EL01N0422A10.c mRNA sequence Length = 568 Score = 224 bits (113), Expect = 3e-55 Identities = 212/245 (86%) Strand = Plus / Minus Query: 204 ctcctgaatgatggctggaagtctgcaggagctccgcctttctcaccaccaaagtcacca 263 |||||||||||||||||||| || ||||||||||| | || || ||||||||||||||| Sbjct: 261 ctcctgaatgatggctggaactcagcaggagctccactcttatcgccaccaaagtcacca 202 Query: 264 ggtgcaccacgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccc 323 || |||||||||||||| |||||||| ||||||||||| ||| | ||||||||||| || Sbjct: 201 ggagcaccacgaggaccaccacggtacccatccctgtcaccaaaccttggcctgtcgccg 142 Query: 324 tcaaaacgaggtggccccctcgggcgatcaccaggtgggccagaaccgagtgggcggcca 383 |||||||| ||| ||||| ||||| |||||||| |||||||| || | |||||||||| Sbjct: 141 tcaaaacggcctgggccccttgggcggtcaccaggagggccagagccaaatgggcggcca 82 Query: 384 ggaggcctggcagattttttgagcgtggcaggcacaatctcagacggcaggttgaggaag 443 || ||| ||||||| || ||||||||||||||||| ||||||||||| ||||| ||| || Sbjct: 81 ggtggcttggcagacttcttgagcgtggcaggcacgatctcagacgggaggttcaggtag 22 Query: 444 ttgcg 448 ||||| Sbjct: 21 ttgcg 17
>gb|DQ268860.1| Solanum tuberosum clone 178H07 40S ribosomal protein S10-like protein mRNA, complete cds Length = 735 Score = 111 bits (56), Expect = 3e-21 Identities = 158/192 (82%) Strand = Plus / Minus Query: 450 aggaactcaatgccatcgttggtgaggtaccaatagtaatgctgccacgagaaggtctcc 509 ||||||||||||||||| ||||| || ||||| ||||| ||| ||| | |||||||| Sbjct: 263 aggaactcaatgccatcattggtaagataccagtagtagtgcatccaagcaaaggtctca 204 Query: 510 ctgacgtattccttagacttgaagctctgcatgagcttgatcacctggaggttcggcaca 569 | || || ||||| ||||| ||||||||||| ||||| ||||| || |||||||||||| Sbjct: 203 cgcacatactcctttgacttaaagctctgcatcagcttaatcacttgtaggttcggcaca 144 Query: 570 tcaatctgcgggtgcttcgccaggttgtagtccttcttggcatacagcaccccctcttgg 629 ||||| | || || ||||||| ||||||||||||||| ||| | || ||||||||| Sbjct: 143 tcaatgttgggatgtttcgccaagttgtagtccttcttagcaaagcatactccctcttgg 84 Query: 630 aagaggtacttg 641 |||||||||||| Sbjct: 83 aagaggtacttg 72 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 231 ggagctccgcctttctcaccaccaaagtcaccaggtgcaccacgaggaccgccacggtaa 290 |||||||| || |||||||| ||||| |||||||||| ||| | ||||| |||||||| Sbjct: 479 ggagctccacccttctcacctccaaattcaccaggtggacctcttggaccagcacggtaa 420 Query: 291 ccatccctgtcgccatatcttggcctgtcaccctc 325 |||||||| || ||| | |||||||| |||||||| Sbjct: 419 ccatccctatcaccaaaccttggcctatcaccctc 385
>gb|DQ252484.1| Solanum tuberosum clone 048B07 40S ribosomal protein S10-like mRNA, complete cds Length = 738 Score = 111 bits (56), Expect = 3e-21 Identities = 158/192 (82%) Strand = Plus / Minus Query: 450 aggaactcaatgccatcgttggtgaggtaccaatagtaatgctgccacgagaaggtctcc 509 ||||||||||||||||| ||||| || ||||| ||||| ||| ||| | |||||||| Sbjct: 261 aggaactcaatgccatcattggtaagataccagtagtagtgcatccaagcaaaggtctca 202 Query: 510 ctgacgtattccttagacttgaagctctgcatgagcttgatcacctggaggttcggcaca 569 | || || ||||| ||||| ||||||||||| ||||| ||||| || |||||||||||| Sbjct: 201 cgcacatactcctttgacttaaagctctgcatcagcttaatcacttgtaggttcggcaca 142 Query: 570 tcaatctgcgggtgcttcgccaggttgtagtccttcttggcatacagcaccccctcttgg 629 ||||| | || || ||||||| ||||||||||||||| ||| | || ||||||||| Sbjct: 141 tcaatgttgggatgtttcgccaagttgtagtccttcttagcaaagcatactccctcttgg 82 Query: 630 aagaggtacttg 641 |||||||||||| Sbjct: 81 aagaggtacttg 70 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 231 ggagctccgcctttctcaccaccaaagtcaccaggtgcaccacgaggaccgccacggtaa 290 |||||||| || |||||||| ||||| |||||||||| ||| | ||||| |||||||| Sbjct: 477 ggagctccacccttctcacctccaaattcaccaggtggacctcttggaccagcacggtaa 418 Query: 291 ccatccctgtcgccatatcttggcctgtcaccctc 325 |||||||| || ||| | |||||||| |||||||| Sbjct: 417 ccatccctatcaccaaaccttggcctatcaccctc 383
>gb|DQ252521.1| Solanum tuberosum clone 111F10 40S ribosomal protein S10-like mRNA, complete cds Length = 859 Score = 101 bits (51), Expect = 3e-18 Identities = 114/135 (84%) Strand = Plus / Minus Query: 194 tccaccagagctcctgaatgatggctggaagtctgcaggagctccgcctttctcaccacc 253 ||||||||| | |||||| | |||||| |||| || |||||||| || |||||||| || Sbjct: 528 tccaccagaacccctgaaagcaggctggtagtcagctggagctccacccttctcacctcc 469 Query: 254 aaagtcaccaggtgcaccacgaggaccgccacggtaaccatccctgtcgccatatcttgg 313 ||| |||||||||| ||| | ||| || ||||||||||||| ||||||||||| ||||| Sbjct: 468 aaactcaccaggtggacctctaggtccagcacggtaaccatctctgtcgccataccttgg 409 Query: 314 cctgtcaccctcaaa 328 ||| ||||||||||| Sbjct: 408 cctatcaccctcaaa 394 Score = 93.7 bits (47), Expect = 7e-16 Identities = 182/227 (80%) Strand = Plus / Minus Query: 450 aggaactcaatgccatcgttggtgaggtaccaatagtaatgctgccacgagaaggtctcc 509 ||||||||||||||||| || || |||||||| ||||| ||| ||| | ||| ||||| Sbjct: 275 aggaactcaatgccatcatttgtaaggtaccagtagtagtgcatccaagcgaatgtctcg 216 Query: 510 ctgacgtattccttagacttgaagctctgcatgagcttgatcacctggaggttcggcaca 569 | || || |||||||| |||||||||||||| || ||||| ||||| || || |||||| Sbjct: 215 cgaacatactccttagatttgaagctctgcatcagtttgataacctgtagatttggcaca 156 Query: 570 tcaatctgcgggtgcttcgccaggttgtagtccttcttggcatacagcaccccctcttgg 629 || || ||| ||||| |||| |||||| |||||||| || || ||| ||||||||| Sbjct: 155 tcgattaacggatgcttggccaagttgtaatccttcttcgcgtagcacactccctcttgg 96 Query: 630 aagaggtacttgcaaatctcattgcggttcttcttggagatgatcat 676 |||||||| ||| | ||||| | |||||||||| ||||| ||||| Sbjct: 95 aagaggtatttggagatctctctacggttcttctctgagataatcat 49
>ref|NM_118706.2| Arabidopsis thaliana structural constituent of ribosome AT4G25740 transcript variant AT4G25740.1 mRNA, complete cds Length = 746 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 ||||||| |||||| ||||| || |||||||| ||||| ||||| |||||||| |||| Sbjct: 246 accaataataatgcatccacgcaaatgtctccctaacgtactccttggacttgaaactct 187 Query: 538 gcatgagcttgatcacctggaggttcggcacatcaatc 575 |||||||||| ||||| || ||||| || ||||||||| Sbjct: 186 gcatgagcttaatcacttgcaggtttggtacatcaatc 149 Score = 44.1 bits (22), Expect = 0.62 Identities = 79/98 (80%) Strand = Plus / Minus Query: 268 caccacgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccctcaa 327 ||||||| || || |||||||| ||||| | ||| ||| |||| || | ||| || ||| Sbjct: 453 caccacgtgggcctccacggtatccatcacggtcaccaaatctgggacggtctccatcag 394 Query: 328 aacgaggtggccccctcgggcgatcaccaggtgggcca 365 | |||||||| || || |||||||||||||||||||| Sbjct: 393 agcgaggtggtcctctttggcgatcaccaggtgggcca 356
>ref|NM_001036641.1| Arabidopsis thaliana structural constituent of ribosome AT4G25740 transcript variant AT4G25740.2 mRNA, complete cds Length = 736 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 ||||||| |||||| ||||| || |||||||| ||||| ||||| |||||||| |||| Sbjct: 261 accaataataatgcatccacgcaaatgtctccctaacgtactccttggacttgaaactct 202 Query: 538 gcatgagcttgatcacctggaggttcggcacatcaatc 575 |||||||||| ||||| || ||||| || ||||||||| Sbjct: 201 gcatgagcttaatcacttgcaggtttggtacatcaatc 164
>gb|AY113926.1| Arabidopsis thaliana putative ribosomal protein S10 (At4g25740) mRNA, complete cds Length = 565 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 ||||||| |||||| ||||| || |||||||| ||||| ||||| |||||||| |||| Sbjct: 199 accaataataatgcatccacgcaaatgtctccctaacgtactccttggacttgaaactct 140 Query: 538 gcatgagcttgatcacctggaggttcggcacatcaatc 575 |||||||||| ||||| || ||||| || ||||||||| Sbjct: 139 gcatgagcttaatcacttgcaggtttggtacatcaatc 102 Score = 44.1 bits (22), Expect = 0.62 Identities = 79/98 (80%) Strand = Plus / Minus Query: 268 caccacgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccctcaa 327 ||||||| || || |||||||| ||||| | ||| ||| |||| || | ||| || ||| Sbjct: 406 caccacgtgggcctccacggtatccatcacggtcaccaaatctgggacggtctccatcag 347 Query: 328 aacgaggtggccccctcgggcgatcaccaggtgggcca 365 | |||||||| || || |||||||||||||||||||| Sbjct: 346 agcgaggtggtcctctttggcgatcaccaggtgggcca 309
>gb|AY035172.1| Arabidopsis thaliana putative ribosomal protein S10 (At4g25740) mRNA, complete cds Length = 762 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 ||||||| |||||| ||||| || |||||||| ||||| ||||| |||||||| |||| Sbjct: 246 accaataataatgcatccacgcaaatgtctccctaacgtactccttggacttgaaactct 187 Query: 538 gcatgagcttgatcacctggaggttcggcacatcaatc 575 |||||||||| ||||| || ||||| || ||||||||| Sbjct: 186 gcatgagcttaatcacttgcaggtttggtacatcaatc 149 Score = 44.1 bits (22), Expect = 0.62 Identities = 79/98 (80%) Strand = Plus / Minus Query: 268 caccacgaggaccgccacggtaaccatccctgtcgccatatcttggcctgtcaccctcaa 327 ||||||| || || |||||||| ||||| | ||| ||| |||| || | ||| || ||| Sbjct: 453 caccacgtgggcctccacggtatccatcacggtcaccaaatctgggacggtctccatcag 394 Query: 328 aacgaggtggccccctcgggcgatcaccaggtgggcca 365 | |||||||| || || |||||||||||||||||||| Sbjct: 393 agcgaggtggtcctctttggcgatcaccaggtgggcca 356
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63 Length = 198777 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 ||||||| |||||| ||||| || |||||||| ||||| ||||| |||||||| |||| Sbjct: 190298 accaataataatgcatccacgcaaatgtctccctaacgtactccttggacttgaaactct 190357 Query: 538 gcatgagcttgatcacctggaggttcggcacatcaatc 575 |||||||||| ||||| || ||||| || ||||||||| Sbjct: 190358 gcatgagcttaatcacttgcaggtttggtacatcaatc 190395 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ggcgatcaccaggtgggcca 365 |||||||||||||||||||| Sbjct: 190169 ggcgatcaccaggtgggcca 190188
>emb|AL050400.1|ATL73G19 Arabidopsis thaliana DNA chromosome 4, cosmid clone L73G19 (ESSA project) Length = 42446 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 ||||||| |||||| ||||| || |||||||| ||||| ||||| |||||||| |||| Sbjct: 38791 accaataataatgcatccacgcaaatgtctccctaacgtactccttggacttgaaactct 38850 Query: 538 gcatgagcttgatcacctggaggttcggcacatcaatc 575 |||||||||| ||||| || ||||| || ||||||||| Sbjct: 38851 gcatgagcttaatcacttgcaggtttggtacatcaatc 38888 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ggcgatcaccaggtgggcca 365 |||||||||||||||||||| Sbjct: 38662 ggcgatcaccaggtgggcca 38681
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 ||||||| |||||| ||||| || |||||||| ||||| ||||| |||||||| |||| Sbjct: 5442 accaataataatgcatccacgcaaatgtctccctaacgtactccttggacttgaaactct 5501 Query: 538 gcatgagcttgatcacctggaggttcggcacatcaatc 575 |||||||||| ||||| || ||||| || ||||||||| Sbjct: 5502 gcatgagcttaatcacttgcaggtttggtacatcaatc 5539 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ggcgatcaccaggtgggcca 365 |||||||||||||||||||| Sbjct: 5313 ggcgatcaccaggtgggcca 5332
>gb|DQ226795.1| Boechera divaricarpa isolate SLW-B-C05 mRNA sequence Length = 448 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 282 ccacggtaaccatccctgtcgccatatcttggcctgtcaccctcaaaacgaggtggcccc 341 |||||||| ||||| | ||| |||||||| || | ||| || ||||| |||||||| || Sbjct: 232 ccacggtatccatcacggtcaccatatctgggacggtctccttcaaagcgaggtggtcct 173 Query: 342 ctcgggcgatcaccaggtgggcca 365 |||||||||||||||||||||||| Sbjct: 172 ctcgggcgatcaccaggtgggcca 149
>emb|AJ538899.1|NTA538899 Nicotiana tabacum cDNA-AFLP-fragment BT2-M33-002 Length = 447 Score = 63.9 bits (32), Expect = 7e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 450 aggaactcaatgccatcgttggtgaggtaccaatagtaatgctgccacgagaaggtctcc 509 |||||||||||||| || ||||| || ||||||||||| ||| ||| | |||||||| Sbjct: 142 aggaactcaatgccgtcattggtcagataccaatagtagtgcatccaagcaaaggtctca 83 Query: 510 ctgacgtattccttagacttgaagctctgcat 541 | ||||||||||| |||||||| |||||||| Sbjct: 82 cgcacgtattccttcgacttgaaactctgcat 51
>emb|CT025844.1| Medicago truncatula chromosome 5 clone mte1-41h18, COMPLETE SEQUENCE Length = 103321 Score = 61.9 bits (31), Expect = 3e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 507 tccctgacgtattccttagacttgaagctctgcatgagcttgatcacctggaggttcggc 566 ||||| || |||||| |||| |||||||||||||| ||||| ||||| || || || ||| Sbjct: 79241 tccctcacatattccctagatttgaagctctgcatcagcttaatcacttgcagatttggc 79182 Query: 567 acatcaatctgcgggtgcttcgccaggttgtagtccttcttggcata 613 |||||||| | |||||||| |||| ||| | |||||||| ||||| Sbjct: 79181 acatcaatttctgggtgcttagccaaattgaaatccttctttgcata 79135
>gb|DQ066194.1| Ixodes scapularis isolate ISUFL81 40S ribosomal protein S10 mRNA, complete cds Length = 471 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 402 ttgagcgtggcaggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatg 461 ||||| ||||| ||||||||||| | ||||||| |||||||| |||||| ||| ||| Sbjct: 278 ttgagggtggccggcacaatctcggggggcaggtggaggaagtcccgcaggtactggatg 219 Query: 462 ccatcgttggtgaggtaccaatagta 487 || |||||||| |||||||| ||||| Sbjct: 218 ccctcgttggtcaggtaccagtagta 193
>gb|AY961467.1| Phytophthora infestans clone MY-06-E-07 ribosomal protein S10 mRNA, complete cds Length = 546 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 536 ctgcatgagcttgatcacctggaggttcggcacatc 571 ||||||||||||||| ||||||||||| |||||||| Sbjct: 165 ctgcatgagcttgatgacctggaggttgggcacatc 130
>ref|NM_124643.2| Arabidopsis thaliana structural constituent of ribosome AT5G52650 mRNA, complete cds Length = 778 Score = 50.1 bits (25), Expect = 0.010 Identities = 142/181 (78%) Strand = Plus / Minus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 |||||||||||||| ||| | || |||||||| || || ||||| || ||||| |||| Sbjct: 271 accaatagtaatgcatccaggcaaatgtctccctaacatactccttggatttgaaactct 212 Query: 538 gcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgcttcgccaggttgt 597 |||| ||||| ||||| || ||||| || ||||| ||| ||| ||||| || || ||| Sbjct: 211 gcataagcttaatcacttgtaggttggggacatcgatcaacggatgcttagcaagattga 152 Query: 598 agtccttcttggcatacagcaccccctcttggaagaggtacttgcaaatctcattgcggt 657 | |||||||| ||| | || || |||| ||||||||||||||| || || ||||||| Sbjct: 151 aatccttcttcgcaaagcaaactccttctttgaagaggtacttgcagatttctttgcggt 92 Query: 658 t 658 | Sbjct: 91 t 91
>gb|AY122932.1| Arabidopsis thaliana unknown protein (At5g52650) mRNA, complete cds Length = 571 Score = 50.1 bits (25), Expect = 0.010 Identities = 142/181 (78%) Strand = Plus / Minus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 |||||||||||||| ||| | || |||||||| || || ||||| || ||||| |||| Sbjct: 199 accaatagtaatgcatccaggcaaatgtctccctaacatactccttggatttgaaactct 140 Query: 538 gcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgcttcgccaggttgt 597 |||| ||||| ||||| || ||||| || ||||| ||| ||| ||||| || || ||| Sbjct: 139 gcataagcttaatcacttgtaggttggggacatcgatcaacggatgcttagcaagattga 80 Query: 598 agtccttcttggcatacagcaccccctcttggaagaggtacttgcaaatctcattgcggt 657 | |||||||| ||| | || || |||| ||||||||||||||| || || ||||||| Sbjct: 79 aatccttcttcgcaaagcaaactccttctttgaagaggtacttgcagatttctttgcggt 20 Query: 658 t 658 | Sbjct: 19 t 19
>gb|AY065217.1| Arabidopsis thaliana unknown protein (At5g52650) mRNA, complete cds Length = 778 Score = 50.1 bits (25), Expect = 0.010 Identities = 142/181 (78%) Strand = Plus / Minus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 |||||||||||||| ||| | || |||||||| || || ||||| || ||||| |||| Sbjct: 264 accaatagtaatgcatccaggcaaatgtctccctaacatactccttggatttgaaactct 205 Query: 538 gcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgcttcgccaggttgt 597 |||| ||||| ||||| || ||||| || ||||| ||| ||| ||||| || || ||| Sbjct: 204 gcataagcttaatcacttgtaggttggggacatcgatcaacggatgcttagcaagattga 145 Query: 598 agtccttcttggcatacagcaccccctcttggaagaggtacttgcaaatctcattgcggt 657 | |||||||| ||| | || || |||| ||||||||||||||| || || ||||||| Sbjct: 144 aatccttcttcgcaaagcaaactccttctttgaagaggtacttgcagatttctttgcggt 85 Query: 658 t 658 | Sbjct: 84 t 84
>emb|BX830280.1|CNS0A19J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 752 Score = 50.1 bits (25), Expect = 0.010 Identities = 142/181 (78%) Strand = Plus / Minus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 |||||||||||||| ||| | || |||||||| || || ||||| || ||||| |||| Sbjct: 247 accaatagtaatgcatccaggcaaatgtctccctaacatactccttggatttgaaactct 188 Query: 538 gcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgcttcgccaggttgt 597 |||| ||||| ||||| || ||||| || ||||| ||| ||| ||||| || || ||| Sbjct: 187 gcataagcttaatcacttgtaggttggggacatcgatcaacggatgcttagcaagattga 128 Query: 598 agtccttcttggcatacagcaccccctcttggaagaggtacttgcaaatctcattgcggt 657 | |||||||| ||| | || || |||| ||||||||||||||| || || ||||||| Sbjct: 127 aatccttcttcgcaaagcaaactccttctttgaagaggtacttgcagatttctttgcggt 68 Query: 658 t 658 | Sbjct: 67 t 67
>emb|BX830062.1|CNS0A1D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 750 Score = 50.1 bits (25), Expect = 0.010 Identities = 142/181 (78%) Strand = Plus / Minus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 |||||||||||||| ||| | || |||||||| || || ||||| || ||||| |||| Sbjct: 245 accaatagtaatgcatccaggcaaatgtctccctaacatactccttggatttgaaactct 186 Query: 538 gcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgcttcgccaggttgt 597 |||| ||||| ||||| || ||||| || ||||| ||| ||| ||||| || || ||| Sbjct: 185 gcataagcttaatcacttgtaggttggggacatcgatcaacggatgcttagcaagattga 126 Query: 598 agtccttcttggcatacagcaccccctcttggaagaggtacttgcaaatctcattgcggt 657 | |||||||| ||| | || || |||| ||||||||||||||| || || ||||||| Sbjct: 125 aatccttcttcgcaaagcaaactccttctttgaagaggtacttgcagatttctttgcggt 66 Query: 658 t 658 | Sbjct: 65 t 65
>gb|AY088678.1| Arabidopsis thaliana clone 91769 mRNA, complete sequence Length = 768 Score = 50.1 bits (25), Expect = 0.010 Identities = 142/181 (78%) Strand = Plus / Minus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 |||||||||||||| ||| | || ||||| || || || ||||| || ||||| |||| Sbjct: 273 accaatagtaatgcatccaggcaaatgtctctctaacatactccttggatttgaaactct 214 Query: 538 gcatgagcttgatcacctggaggttcggcacatcaatctgcgggtgcttcgccaggttgt 597 |||| ||||| ||||| || |||||||| ||||| ||| ||| ||||| || || ||| Sbjct: 213 gcataagcttaatcacttgtaggttcgggacatcgatcaacggatgcttagcaagattga 154 Query: 598 agtccttcttggcatacagcaccccctcttggaagaggtacttgcaaatctcattgcggt 657 | |||||||| ||| | || || |||| ||||||||||||||| || || ||||||| Sbjct: 153 aatccttcttcgcaaagcaaactccttctttgaagaggtacttgcagatttctttgcggt 94 Query: 658 t 658 | Sbjct: 93 t 93 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Minus Query: 213 gatggctggaagtctgcaggagctccgcctttctcaccaccaaagtcacca 263 ||||||||| | |||||||||||||| || || ||||| ||||| |||||| Sbjct: 532 gatggctggtaatctgcaggagctccacccttttcacctccaaactcacca 482
>ref|NM_123516.2| Arabidopsis thaliana structural constituent of ribosome AT5G41520 mRNA, complete cds Length = 807 Score = 48.1 bits (24), Expect = 0.040 Identities = 66/80 (82%) Strand = Plus / Minus Query: 471 gtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttg 530 |||||| |||| ||||||||| ||| | |||||||| || || ||||||||||| ||| Sbjct: 287 gtgaggaaccagtagtaatgcatccaagcaaaggtctctctcacatattccttagatttg 228 Query: 531 aagctctgcatgagcttgat 550 || |||||||| | |||||| Sbjct: 227 aaactctgcatcaacttgat 208
>gb|AF375440.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds Length = 780 Score = 48.1 bits (24), Expect = 0.040 Identities = 66/80 (82%) Strand = Plus / Minus Query: 471 gtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttg 530 |||||| |||| ||||||||| ||| | |||||||| || || ||||||||||| ||| Sbjct: 287 gtgaggaaccagtagtaatgcatccaagcaaaggtctctctcacatattccttagatttg 228 Query: 531 aagctctgcatgagcttgat 550 || |||||||| | |||||| Sbjct: 227 aaactctgcatcaacttgat 208
>gb|AY060539.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds Length = 543 Score = 48.1 bits (24), Expect = 0.040 Identities = 66/80 (82%) Strand = Plus / Minus Query: 471 gtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttg 530 |||||| |||| ||||||||| ||| | |||||||| || || ||||||||||| ||| Sbjct: 209 gtgaggaaccagtagtaatgcatccaagcaaaggtctctctcacatattccttagatttg 150 Query: 531 aagctctgcatgagcttgat 550 || |||||||| | |||||| Sbjct: 149 aaactctgcatcaacttgat 130
>gb|AY037240.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds Length = 781 Score = 48.1 bits (24), Expect = 0.040 Identities = 66/80 (82%) Strand = Plus / Minus Query: 471 gtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttg 530 |||||| |||| ||||||||| ||| | |||||||| || || ||||||||||| ||| Sbjct: 287 gtgaggaaccagtagtaatgcatccaagcaaaggtctctctcacatattccttagatttg 228 Query: 531 aagctctgcatgagcttgat 550 || |||||||| | |||||| Sbjct: 227 aaactctgcatcaacttgat 208
>emb|BX830030.1|CNS0A1DV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 828 Score = 48.1 bits (24), Expect = 0.040 Identities = 66/80 (82%) Strand = Plus / Minus Query: 471 gtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttg 530 |||||| |||| ||||||||| ||| | |||||||| || || ||||||||||| ||| Sbjct: 297 gtgaggaaccagtagtaatgcatccaagcaaaggtctctctcacatattccttagatttg 238 Query: 531 aagctctgcatgagcttgat 550 || |||||||| | |||||| Sbjct: 237 aaactctgcatcaacttgat 218
>emb|BX832280.1|CNS0A13B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 783 Score = 48.1 bits (24), Expect = 0.040 Identities = 66/80 (82%) Strand = Plus / Minus Query: 471 gtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttg 530 |||||| |||| ||||||||| ||| | |||||||| || || ||||||||||| ||| Sbjct: 281 gtgaggaaccagtagtaatgcatccaagcaaaggtctctctcacatattccttagatttg 222 Query: 531 aagctctgcatgagcttgat 550 || |||||||| | |||||| Sbjct: 221 aaactctgcatcaacttgat 202
>dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK23 Length = 79837 Score = 48.1 bits (24), Expect = 0.040 Identities = 66/80 (82%) Strand = Plus / Plus Query: 471 gtgaggtaccaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttg 530 |||||| |||| ||||||||| ||| | |||||||| || || ||||||||||| ||| Sbjct: 5088 gtgaggaaccagtagtaatgcatccaagcaaaggtctctctcacatattccttagatttg 5147 Query: 531 aagctctgcatgagcttgat 550 || |||||||| | |||||| Sbjct: 5148 aaactctgcatcaacttgat 5167
>emb|AJ538646.1|NTA538646 Nicotiana tabacum cDNA-AFLP-fragment BC32-M2-013 Length = 257 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 231 ggagctccgcctttctcaccaccaaagtcaccagg 265 |||||||| ||||| ||||||||||| |||||||| Sbjct: 201 ggagctccacctttttcaccaccaaactcaccagg 167
>emb|AJ538565.1|NTA538565 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-025 Length = 233 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 231 ggagctccgcctttctcaccaccaaagtcaccagg 265 |||||||| ||||| ||||||||||| |||||||| Sbjct: 29 ggagctccacctttttcaccaccaaactcaccagg 63
>dbj|D88764.1| Rana catesbeiana mRNA for alpha 2 type I collagen, complete cds Length = 4692 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 tcaccaggtgcaccacgaggacc 280 ||||||||||||||||||||||| Sbjct: 2238 tcaccaggtgcaccacgaggacc 2216
>gb|AY070896.1| Drosophila melanogaster LP04958 full insert cDNA Length = 1020 Score = 44.1 bits (22), Expect = 0.62 Identities = 61/74 (82%) Strand = Plus / Minus Query: 414 ggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatgccatcgttggtg 473 ||||| ||||| | |||||||| |||| || ||||||| ||| || || ||||||||| Sbjct: 621 ggcacgatctcgggcggcaggtggaggtagctgcgcagctcctcgattccctcgttggtg 562 Query: 474 aggtaccaatagta 487 |||||||| ||||| Sbjct: 561 aggtaccagtagta 548
>ref|NM_167668.1| Drosophila melanogaster Ribosomal protein S10b CG14206-RB, transcript variant B (RpS10b), mRNA Length = 746 Score = 44.1 bits (22), Expect = 0.62 Identities = 61/74 (82%) Strand = Plus / Minus Query: 414 ggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatgccatcgttggtg 473 ||||| ||||| | |||||||| |||| || ||||||| ||| || || ||||||||| Sbjct: 367 ggcacgatctcgggcggcaggtggaggtagctgcgcagctcctcgattccctcgttggtg 308 Query: 474 aggtaccaatagta 487 |||||||| ||||| Sbjct: 307 aggtaccagtagta 294
>ref|NM_134480.2| Drosophila melanogaster Ribosomal protein S10b CG14206-RC, transcript variant C (RpS10b), mRNA Length = 731 Score = 44.1 bits (22), Expect = 0.62 Identities = 61/74 (82%) Strand = Plus / Minus Query: 414 ggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatgccatcgttggtg 473 ||||| ||||| | |||||||| |||| || ||||||| ||| || || ||||||||| Sbjct: 352 ggcacgatctcgggcggcaggtggaggtagctgcgcagctcctcgattccctcgttggtg 293 Query: 474 aggtaccaatagta 487 |||||||| ||||| Sbjct: 292 aggtaccagtagta 279
>dbj|AK045503.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230207K24 product:hypothetical protein, full insert sequence Length = 2338 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 542 gagcttgatcacctggaggttcggca 567 |||||||||||||||||||| ||||| Sbjct: 377 gagcttgatcacctggaggtacggca 352
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone BACR10M08, complete sequence Length = 180213 Score = 44.1 bits (22), Expect = 0.62 Identities = 61/74 (82%) Strand = Plus / Minus Query: 414 ggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatgccatcgttggtg 473 ||||| ||||| | |||||||| |||| || ||||||| ||| || || ||||||||| Sbjct: 139849 ggcacgatctcgggcggcaggtggaggtagctgcgcagctcctcgattccctcgttggtg 139790 Query: 474 aggtaccaatagta 487 |||||||| ||||| Sbjct: 139789 aggtaccagtagta 139776
>dbj|AB025606.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F6N7 Length = 74282 Score = 44.1 bits (22), Expect = 0.62 Identities = 76/94 (80%) Strand = Plus / Plus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 |||||||||||||| ||| | || |||||||| || || ||||| || ||||| |||| Sbjct: 35831 accaatagtaatgcatccaggcaaatgtctccctaacatactccttggatttgaaactct 35890 Query: 538 gcatgagcttgatcacctggaggttcggcacatc 571 |||| ||||| ||||| || ||||| || ||||| Sbjct: 35891 gcataagcttaatcacttgtaggttggggacatc 35924
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete sequence Length = 346474 Score = 44.1 bits (22), Expect = 0.62 Identities = 61/74 (82%) Strand = Plus / Minus Query: 414 ggcacaatctcagacggcaggttgaggaagttgcgcaggaactcaatgccatcgttggtg 473 ||||| ||||| | |||||||| |||| || ||||||| ||| || || ||||||||| Sbjct: 245615 ggcacgatctcgggcggcaggtggaggtagctgcgcagctcctcgattccctcgttggtg 245556 Query: 474 aggtaccaatagta 487 |||||||| ||||| Sbjct: 245555 aggtaccagtagta 245542
>emb|CR376839.12| Zebrafish DNA sequence from clone DKEY-75G22 in linkage group 2, complete sequence Length = 127371 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 tcactccattgggctagcgcc 127 ||||||||||||||||||||| Sbjct: 50352 tcactccattgggctagcgcc 50372
>gb|AC105075.6| Mus musculus chromosome 1, clone RP23-366P11, complete sequence Length = 195511 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 ttgcaaacatcactacataaa 52 ||||||||||||||||||||| Sbjct: 186359 ttgcaaacatcactacataaa 186379
>emb|AL627248.7| Zebrafish DNA sequence from clone RP71-1G18 in linkage group 2 Contains three novel genes, a novel gene similar to human CASQ1 (calsequestrin 1), six novel genes similar to vertebrate C1Q (gliacolin), a novel gene similar to human HNRPC (heterogeneous nuclear ribonucleoprotein C (C1/C2)), a novel gene for a protein similar to human H326 protein, two novel genes for proteins similar to human apolipoproteins, a novel gene similar to human TEP1 (telomerase-associated protein 1) and a CpG island, complete sequence Length = 143586 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 tcactccattgggctagcgcc 127 ||||||||||||||||||||| Sbjct: 57477 tcactccattgggctagcgcc 57457
>emb|BX829499.1|CNS0A1BF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB17ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 592 Score = 42.1 bits (21), Expect = 2.4 Identities = 69/85 (81%) Strand = Plus / Minus Query: 478 accaatagtaatgctgccacgagaaggtctccctgacgtattccttagacttgaagctct 537 |||||||||||||| ||| | || |||||||| || || ||||| || ||||| |||| Sbjct: 96 accaatagtaatgcatccaggcaaatgtctccctaacatactccttggatttgaaactct 37 Query: 538 gcatgagcttgatcacctggaggtt 562 |||| ||||| ||||| || ||||| Sbjct: 36 gcataagcttaatcacttgtaggtt 12
>dbj|AB049721.2| Pisum sativum ssa-11 mRNA for putative senescence-associated protein, complete cds Length = 1000 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 321 ccctcaaaacgaggtggccccctcgggcgatcaccaggtgg 361 ||||| || |||||||| || || ||||||||||||||||| Sbjct: 345 ccctcgaatcgaggtgggcctctagggcgatcaccaggtgg 385
>gb|BC101918.1| Rattus norvegicus cytochrome P450, family 4, subfamily f, polypeptide 18, mRNA (cDNA clone MGC:124833 IMAGE:7935301), complete cds Length = 2811 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 578 cgggtgcttcgccaggttgta 598 ||||||||||||||||||||| Sbjct: 1070 cgggtgcttcgccaggttgta 1050
>ref|NM_001033686.1| Rattus norvegicus cytochrome P450, family 4, subfamily f, polypeptide 18 (Cyp4f18), mRNA Length = 2811 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 578 cgggtgcttcgccaggttgta 598 ||||||||||||||||||||| Sbjct: 1070 cgggtgcttcgccaggttgta 1050
>emb|AL845366.6| Zebrafish DNA sequence from clone CH211-167C22 in linkage group 20, complete sequence Length = 149189 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 tcactccattgggctagcgcc 127 ||||||||||||||||||||| Sbjct: 110914 tcactccattgggctagcgcc 110934
>gb|AC154142.24| Mus musculus chromosome 1, clone RP23-187M7, complete sequence Length = 237824 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 197 accagagctcctgaatgatggctgg 221 |||||||| |||||||||||||||| Sbjct: 35614 accagagcacctgaatgatggctgg 35638
>gb|BC081808.1| Rattus norvegicus cytochrome P450, family 4, subfamily F, polypeptide 2, mRNA (cDNA clone MGC:93476 IMAGE:7109036), complete cds Length = 2119 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 gggtgcttcgccaggttgta 598 |||||||||||||||||||| Sbjct: 1173 gggtgcttcgccaggttgta 1154
>ref|XM_521903.1| PREDICTED: Pan troglodytes cholinergic receptor, muscarinic 4 (LOC466504), mRNA Length = 1719 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 gcgtggcaggcacaatctca 425 |||||||||||||||||||| Sbjct: 1561 gcgtggcaggcacaatctca 1542
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 caccacgaggaccgccacgg 287 |||||||||||||||||||| Sbjct: 176680 caccacgaggaccgccacgg 176661
>gb|AE017130.1| Yersinia pestis biovar Medievalis str. 91001 section 4 of 16 of the complete genome Length = 290510 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gaggaagttgcgcaggaact 456 |||||||||||||||||||| Sbjct: 197336 gaggaagttgcgcaggaact 197317
>ref|XM_322656.1| Neurospora crassa OR74A predicted protein (NCU03399.1) partial mRNA Length = 1416 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 caccacgaggaccgccacgg 287 |||||||||||||||||||| Sbjct: 1366 caccacgaggaccgccacgg 1347
>ref|XM_951753.1| Neurospora crassa OR74A hypothetical protein (NCU03399.1) partial mRNA Length = 1416 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 caccacgaggaccgccacgg 287 |||||||||||||||||||| Sbjct: 1366 caccacgaggaccgccacgg 1347
>ref|NM_000741.2| Homo sapiens cholinergic receptor, muscarinic 4 (CHRM4), mRNA Length = 1468 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 gcgtggcaggcacaatctca 425 |||||||||||||||||||| Sbjct: 1090 gcgtggcaggcacaatctca 1071
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cgatcaccaggtgggccaga 367 |||||||||||||||||||| Sbjct: 3107713 cgatcaccaggtgggccaga 3107732
>ref|XM_567314.1| Cryptococcus neoformans var. neoformans JEC21 Argonaute-like protein (CNJ00610) partial mRNA Length = 3162 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 caccacgaggaccgccacgg 287 |||||||||||||||||||| Sbjct: 1042 caccacgaggaccgccacgg 1023
>gb|AC090681.13| Homo sapiens 12 BAC RP11-369C14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 93582 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 gaagctctgcatgagcttga 549 |||||||||||||||||||| Sbjct: 45206 gaagctctgcatgagcttga 45225
>emb|CR974458.2| Pig DNA sequence from clone CH242-29M17 on chromosome 17, complete sequence Length = 177939 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 atcactacataaaaccatca 59 |||||||||||||||||||| Sbjct: 137335 atcactacataaaaccatca 137316
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 ccttcttggcatacagcacc 620 |||||||||||||||||||| Sbjct: 1853845 ccttcttggcatacagcacc 1853864
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 tcaccctcaaaacgaggtgg 337 |||||||||||||||||||| Sbjct: 1074928 tcaccctcaaaacgaggtgg 1074909
>emb|AL356501.6| Human DNA sequence from clone RP5-1159G19 on chromosome 1, complete sequence Length = 69026 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gatacttgcaaacatcacta 46 |||||||||||||||||||| Sbjct: 36850 gatacttgcaaacatcacta 36831
>emb|CR788255.6| Zebrafish DNA sequence from clone DKEY-9C18 in linkage group 2, complete sequence Length = 210464 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccattgggctagcgccaa 129 |||||||||||||||||||| Sbjct: 124234 ctccattgggctagcgccaa 124253 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccattgggctagcgccaa 129 |||||||||||||||||||| Sbjct: 92047 ctccattgggctagcgccaa 92066
>gb|AC123178.4| Rattus norvegicus 7 BAC CH230-20I17 (Children's Hospital Oakland Research Institute) complete sequence Length = 221236 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ctcaccaccaaagtcaccag 264 |||||||||||||||||||| Sbjct: 119937 ctcaccaccaaagtcaccag 119918
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 gaggaagttgcgcaggaact 456 |||||||||||||||||||| Sbjct: 1428749 gaggaagttgcgcaggaact 1428768
>emb|AL669992.1|NCB19C19 Neurospora crassa DNA linkage group II BAC clone B19C19 Length = 61082 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 caccacgaggaccgccacgg 287 |||||||||||||||||||| Sbjct: 22696 caccacgaggaccgccacgg 22715
>emb|AJ414146.1| Yersinia pestis strain CO92 complete genome; segment 6/20 Length = 210050 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 gaggaagttgcgcaggaact 456 |||||||||||||||||||| Sbjct: 197746 gaggaagttgcgcaggaact 197765
>gb|AC113029.23| Mus musculus chromosome 5, clone RP23-206J17, complete sequence Length = 223809 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tcactacataaaaccatcat 60 |||||||||||||||||||| Sbjct: 112770 tcactacataaaaccatcat 112751
>emb|BX469889.7| Zebrafish DNA sequence from clone DKEY-156P3 in linkage group 18, complete sequence Length = 177975 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ggctggaagtctgcaggagc 235 |||||||||||||||||||| Sbjct: 118345 ggctggaagtctgcaggagc 118364
>gb|AC117467.3| Homo sapiens 3 BAC RP11-669C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 90000 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 631 agaggtacttgcaaatctca 650 |||||||||||||||||||| Sbjct: 84463 agaggtacttgcaaatctca 84444
>gb|AC116021.5| Homo sapiens chromosome 11, clone CTD-2589M5, complete sequence Length = 167757 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 gcgtggcaggcacaatctca 425 |||||||||||||||||||| Sbjct: 151979 gcgtggcaggcacaatctca 151998
>gb|AF498918.1| Homo sapiens muscarinic acetylcholine receptor M4 (CHRM4) mRNA, complete cds Length = 1440 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 gcgtggcaggcacaatctca 425 |||||||||||||||||||| Sbjct: 1090 gcgtggcaggcacaatctca 1071
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gtccgatacttgcaaacatc 42 |||||||||||||||||||| Sbjct: 299883 gtccgatacttgcaaacatc 299902
>gb|AC079789.7| Homo sapiens BAC clone RP11-475B2 from 4, complete sequence Length = 198586 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gctcctgaatgatggctgga 222 |||||||||||||||||||| Sbjct: 138534 gctcctgaatgatggctgga 138515
>gb|AC073917.19| Homo sapiens 12q BAC RP11-415D21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163836 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 aggcctggcagattttttga 405 |||||||||||||||||||| Sbjct: 86179 aggcctggcagattttttga 86198
>gb|BC102416.1| Bos taurus similar to 40S ribosomal protein S10, mRNA (cDNA clone MGC:127433 IMAGE:7951311), complete cds Length = 643 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 459 atgccatcgttggtgaggtaccaatagtaatg 490 ||||| ||||||||||||||||| ||| |||| Sbjct: 266 atgccctcgttggtgaggtaccagtagaaatg 235
>gb|AC024293.18| Homo sapiens chromosome 11, clone RP11-425L10, complete sequence Length = 70106 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 gcgtggcaggcacaatctca 425 |||||||||||||||||||| Sbjct: 3811 gcgtggcaggcacaatctca 3830
>gb|AF385590.1|AF385590 Homo sapiens m4 muscarinic cholinergic receptor (CHRM4) mRNA, complete cds Length = 1476 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 gcgtggcaggcacaatctca 425 |||||||||||||||||||| Sbjct: 1090 gcgtggcaggcacaatctca 1071
>gb|AC008102.18| Homo sapiens chromosome 11 clone bac41i21 map 11q13, complete sequence Length = 126787 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 622 cctcttggaagaggtacttgcaaa 645 ||||||||||||||||||| |||| Sbjct: 70824 cctcttggaagaggtacttacaaa 70847
>gb|BC095546.1| Homo sapiens cholinergic receptor, muscarinic 4, mRNA (cDNA clone IMAGE:6519223), partial cds Length = 1440 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 gcgtggcaggcacaatctca 425 |||||||||||||||||||| Sbjct: 1091 gcgtggcaggcacaatctca 1072
>gb|AC073532.18|AC073532 Homo sapiens 12 BAC RP11-150F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143759 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 aggcctggcagattttttga 405 |||||||||||||||||||| Sbjct: 69183 aggcctggcagattttttga 69202
>dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0047D12 Length = 145981 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ggttgaggaagttgcgcagg 452 |||||||||||||||||||| Sbjct: 30856 ggttgaggaagttgcgcagg 30837
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cggccaggaggcctggcaga 397 |||||||||||||||||||| Sbjct: 3193612 cggccaggaggcctggcaga 3193631
>ref|XM_578642.1| PREDICTED: Rattus norvegicus similar to Cyp4f15 protein (LOC503122), mRNA Length = 2772 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 gggtgcttcgccaggttgta 598 |||||||||||||||||||| Sbjct: 2243 gggtgcttcgccaggttgta 2224
>gb|M16405.2|HUMACHRM4 Homo sapiens muscarinic acetylcholine receptor m4 (CHRM4) gene, complete cds Length = 2598 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 gcgtggcaggcacaatctca 425 |||||||||||||||||||| Sbjct: 1890 gcgtggcaggcacaatctca 1871
>emb|BX470166.11| Zebrafish DNA sequence from clone CH211-238N5 in linkage group 18, complete sequence Length = 117241 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ggctggaagtctgcaggagc 235 |||||||||||||||||||| Sbjct: 29412 ggctggaagtctgcaggagc 29393
>gb|AC156277.6| Mus musculus 6 BAC RP24-309B5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 152539 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 aaacttataactcaaaaaca 83 |||||||||||||||||||| Sbjct: 89429 aaacttataactcaaaaaca 89410
>dbj|AP000822.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-675B4, complete sequence Length = 94501 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 622 cctcttggaagaggtacttgcaaa 645 ||||||||||||||||||| |||| Sbjct: 9001 cctcttggaagaggtacttacaaa 8978
>dbj|AB098806.1| Bos taurus mRNA for similar to ribosomal protein S10, partial cds, clone: ORCS12838 Length = 614 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 459 atgccatcgttggtgaggtaccaatagtaatg 490 ||||| ||||||||||||||||| ||| |||| Sbjct: 318 atgccctcgttggtgaggtaccagtagaaatg 349
>ref|NM_019623.2| Rattus norvegicus cytochrome P450, family 4, subfamily F, polypeptide 2 (Cyp4f2), mRNA Length = 2119 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 gggtgcttcgccaggttgta 598 |||||||||||||||||||| Sbjct: 1173 gggtgcttcgccaggttgta 1154
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 ggtgcttcgccaggttgtag 599 |||||||||||||||||||| Sbjct: 1837679 ggtgcttcgccaggttgtag 1837660
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gctggaagtctgcaggagct 236 |||||||||||||||||||| Sbjct: 2577266 gctggaagtctgcaggagct 2577285
>ref|NM_001034716.1| Bos taurus similar to 40S ribosomal protein S10 (MGC127433), mRNA Length = 643 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 459 atgccatcgttggtgaggtaccaatagtaatg 490 ||||| ||||||||||||||||| ||| |||| Sbjct: 266 atgccctcgttggtgaggtaccagtagaaatg 235
>emb|AL929314.9| Zebrafish DNA sequence from clone CH211-155E19 in linkage group 5, complete sequence Length = 176048 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ataactcaaaaacatcacat 89 |||||||||||||||||||| Sbjct: 50013 ataactcaaaaacatcacat 49994
>gb|AC138221.23| Mus musculus chromosome 15, clone RP23-204C16, complete sequence Length = 239740 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 caggaggcctggcagatttt 401 |||||||||||||||||||| Sbjct: 173232 caggaggcctggcagatttt 173251
>emb|X15265.1|HSACM4 Homo sapiens gene for muscarinic acetylcholine receptor M4 Length = 1703 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 gcgtggcaggcacaatctca 425 |||||||||||||||||||| Sbjct: 1190 gcgtggcaggcacaatctca 1171
>dbj|AB065585.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_148 Length = 913 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 gcgtggcaggcacaatctca 425 |||||||||||||||||||| Sbjct: 411 gcgtggcaggcacaatctca 392 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,614,040 Number of Sequences: 3902068 Number of extensions: 4614040 Number of successful extensions: 81841 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 81260 Number of HSP's gapped (non-prelim): 590 length of query: 705 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 682 effective length of database: 17,143,297,704 effective search space: 11691729034128 effective search space used: 11691729034128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)