| Clone Name | rbags39p08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475849.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1566 Score = 335 bits (169), Expect = 1e-88 Identities = 312/357 (87%), Gaps = 2/357 (0%) Strand = Plus / Minus Query: 228 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 287 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 1562 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 1503 Query: 288 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 346 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 1502 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 1444 Query: 347 gatcttggactgggagaacttgaggccgtgcgccgtgctgacgaccaccgtacggtcatt 406 |||||||||||| |||||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 1443 gatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtcatt 1384 Query: 407 cgccccgatggtgccctcttcccggagcttgaagagcgccgcgagcgcgaccccggtatg 466 | ||||||| ||| || || ||||||||||| || || ||||| || ||||| ||||| Sbjct: 1383 tggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagtatg 1324 Query: 467 cgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatgagctcctcctc 526 |||||| ||||||||||| |||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 1323 cgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctcctc 1264 Query: 527 cgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgcacggtcgac 583 ||||||||| |||||||||||| ||||||||||| || |||||||| || ||||| Sbjct: 1263 cgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 1207
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 335 bits (169), Expect = 1e-88 Identities = 312/357 (87%), Gaps = 2/357 (0%) Strand = Plus / Minus Query: 228 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 287 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 3289 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 3230 Query: 288 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 346 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 3229 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 3171 Query: 347 gatcttggactgggagaacttgaggccgtgcgccgtgctgacgaccaccgtacggtcatt 406 |||||||||||| |||||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 3170 gatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtcatt 3111 Query: 407 cgccccgatggtgccctcttcccggagcttgaagagcgccgcgagcgcgaccccggtatg 466 | ||||||| ||| || || ||||||||||| || || ||||| || ||||| ||||| Sbjct: 3110 tggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagtatg 3051 Query: 467 cgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatgagctcctcctc 526 |||||| ||||||||||| |||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 3050 cgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctcctc 2991 Query: 527 cgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgcacggtcgac 583 ||||||||| |||||||||||| ||||||||||| || |||||||| || ||||| Sbjct: 2990 cgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 2934
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 335 bits (169), Expect = 1e-88 Identities = 312/357 (87%), Gaps = 2/357 (0%) Strand = Plus / Minus Query: 228 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 287 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 78474 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 78415 Query: 288 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 346 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 78414 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 78356 Query: 347 gatcttggactgggagaacttgaggccgtgcgccgtgctgacgaccaccgtacggtcatt 406 |||||||||||| |||||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 78355 gatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtcatt 78296 Query: 407 cgccccgatggtgccctcttcccggagcttgaagagcgccgcgagcgcgaccccggtatg 466 | ||||||| ||| || || ||||||||||| || || ||||| || ||||| ||||| Sbjct: 78295 tggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagtatg 78236 Query: 467 cgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatgagctcctcctc 526 |||||| ||||||||||| |||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 78235 cgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctcctc 78176 Query: 527 cgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgcacggtcgac 583 ||||||||| |||||||||||| ||||||||||| || |||||||| || ||||| Sbjct: 78175 cgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 78119
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 335 bits (169), Expect = 1e-88 Identities = 312/357 (87%), Gaps = 2/357 (0%) Strand = Plus / Minus Query: 228 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 287 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 102977 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 102918 Query: 288 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 346 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 102917 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 102859 Query: 347 gatcttggactgggagaacttgaggccgtgcgccgtgctgacgaccaccgtacggtcatt 406 |||||||||||| |||||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 102858 gatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtcatt 102799 Query: 407 cgccccgatggtgccctcttcccggagcttgaagagcgccgcgagcgcgaccccggtatg 466 | ||||||| ||| || || ||||||||||| || || ||||| || ||||| ||||| Sbjct: 102798 tggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagtatg 102739 Query: 467 cgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatgagctcctcctc 526 |||||| ||||||||||| |||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 102738 cgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctcctc 102679 Query: 527 cgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgcacggtcgac 583 ||||||||| |||||||||||| ||||||||||| || |||||||| || ||||| Sbjct: 102678 cgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 102622
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 335 bits (169), Expect = 1e-88 Identities = 312/357 (87%), Gaps = 2/357 (0%) Strand = Plus / Minus Query: 228 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 287 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 27071893 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 27071834 Query: 288 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 346 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 27071833 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 27071775 Query: 347 gatcttggactgggagaacttgaggccgtgcgccgtgctgacgaccaccgtacggtcatt 406 |||||||||||| |||||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 27071774 gatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtcatt 27071715 Query: 407 cgccccgatggtgccctcttcccggagcttgaagagcgccgcgagcgcgaccccggtatg 466 | ||||||| ||| || || ||||||||||| || || ||||| || ||||| ||||| Sbjct: 27071714 tggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagtatg 27071655 Query: 467 cgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatgagctcctcctc 526 |||||| ||||||||||| |||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 27071654 cgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctcctc 27071595 Query: 527 cgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgcacggtcgac 583 ||||||||| |||||||||||| ||||||||||| || |||||||| || ||||| Sbjct: 27071594 cgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 27071538 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 cagcagcagcaggaggacgagggc 219 ||||||||||||||||| |||||| Sbjct: 4882747 cagcagcagcaggaggaggagggc 4882724
>dbj|AK109478.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F04, full insert sequence Length = 1876 Score = 335 bits (169), Expect = 1e-88 Identities = 312/357 (87%), Gaps = 2/357 (0%) Strand = Plus / Minus Query: 228 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 287 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 1612 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 1553 Query: 288 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 346 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 1552 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 1494 Query: 347 gatcttggactgggagaacttgaggccgtgcgccgtgctgacgaccaccgtacggtcatt 406 |||||||||||| |||||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 1493 gatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtcatt 1434 Query: 407 cgccccgatggtgccctcttcccggagcttgaagagcgccgcgagcgcgaccccggtatg 466 | ||||||| ||| || || ||||||||||| || || ||||| || ||||| ||||| Sbjct: 1433 tggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagtatg 1374 Query: 467 cgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatgagctcctcctc 526 |||||| ||||||||||| |||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 1373 cgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctcctc 1314 Query: 527 cgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgcacggtcgac 583 ||||||||| |||||||||||| ||||||||||| || |||||||| || ||||| Sbjct: 1313 cgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 1257
>dbj|AK101669.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058D04, full insert sequence Length = 1938 Score = 335 bits (169), Expect = 1e-88 Identities = 312/357 (87%), Gaps = 2/357 (0%) Strand = Plus / Minus Query: 228 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 287 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 1661 agcttacccttgagcctcttcttgaggacatccatgacggcaccgaagtcagccttcacg 1602 Query: 288 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 346 |||||||| || || |||||||||||||||||||| |||||||| ||| || |||||||| Sbjct: 1601 ctgaccgggggattcgcatacttgcaggccatgtcttcgatcttgctg-tcatggtagtc 1543 Query: 347 gatcttggactgggagaacttgaggccgtgcgccgtgctgacgaccaccgtacggtcatt 406 |||||||||||| |||||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 1542 gatcttggactgtgagaacttcagaccatgagctgtgctgacgactaccgtgcggtcatt 1483 Query: 407 cgccccgatggtgccctcttcccggagcttgaagagcgccgcgagcgcgaccccggtatg 466 | ||||||| ||| || || ||||||||||| || || ||||| || ||||| ||||| Sbjct: 1482 tggcccgatgatgcgctggtcacggagcttgaacagtgctgcgagggcaaccccagtatg 1423 Query: 467 cgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatgagctcctcctc 526 |||||| ||||||||||| |||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 1422 cgggcaagcaaacatgccagtgcgatcagcgagcgacattgcgttcatgagttcctcctc 1363 Query: 527 cgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgcacggtcgac 583 ||||||||| |||||||||||| ||||||||||| || |||||||| || ||||| Sbjct: 1362 cgtggcctcctcgacgatgccatcagttgccttgagcgcaaccaccgcgcgatcgac 1306
>gb|BT016678.1| Zea mays clone Contig511 mRNA sequence Length = 1283 Score = 276 bits (139), Expect = 8e-71 Identities = 303/355 (85%), Gaps = 2/355 (0%) Strand = Plus / Minus Query: 228 agcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggccttcacg 287 ||||| ||||||||||||||||| || || |||||||||||||| ||||| ||||||||| Sbjct: 1023 agcttgcccttgagcctcttcttcagcacatccatgacggcgccaaagtcagccttcacg 964 Query: 288 ctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtggtagtc 346 || || || ||||||| |||||||| ||||||||||||||||| ||| || |||||||| Sbjct: 963 ctcacaggcgggttggagtacttgcaagccatgtcctcgatcttgctg-tcatggtagtc 905 Query: 347 gatcttggactgggagaacttgaggccgtgcgccgtgctgacgaccaccgtacggtcatt 406 |||||| ||||| ||||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 904 gatcttcgactgcgagaacttgaggccgtgagccgtgctgacgaccacggtgcggtcgtt 845 Query: 407 cgccccgatggtgccctcttcccggagcttgaagagcgccgcgagcgcgaccccggtatg 466 || ||||||| || || |||| ||||||||| || || ||||||||||||||||| || Sbjct: 844 cgtcccgatgacgcgctggtccctgagcttgaacagggcggcgagcgcgaccccggtgtg 785 Query: 467 cgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatgagctcctcctc 526 |||||| || ||||| || ||||| |||||||| ||||| || ||||||||||| ||||| Sbjct: 784 cgggcaagcgaacatccccgtgcggtcggcgagcgacatcgcgttcatgagctcttcctc 725 Query: 527 cgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgcacggtcg 581 ||| ||||| |||| ||||| | || |||||||| |||||||| || |||||| Sbjct: 724 cgtcgcctcctcgacaatgccgtccgtcgccttgagcgcgaccacggcccggtcg 670
>gb|AY112514.1| Zea mays CL891_1 mRNA sequence Length = 1846 Score = 198 bits (100), Expect = 1e-47 Identities = 174/196 (88%), Gaps = 2/196 (1%) Strand = Plus / Minus Query: 222 gctcaaagcttacccttgagcctcttcttgaggacgtccatgacggcgccgaagtcggcc 281 ||||| ||||| ||||||||||||||||| || || |||||||||||||| ||||||||| Sbjct: 1607 gctcagagcttgcccttgagcctcttcttcagcacatccatgacggcgccaaagtcggcc 1548 Query: 282 ttcacgctgaccggagggttggcatacttgcaggccatgtcctcgatctt-ctgatcgtg 340 |||||||| || || ||||||| |||||||| ||||||||||||||||| ||| || || Sbjct: 1547 ttcacgctcacaggcgggttggagtacttgcaagccatgtcctcgatcttgctg-tcatg 1489 Query: 341 gtagtcgatcttggactgggagaacttgaggccgtgcgccgtgctgacgaccaccgtacg 400 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| || || Sbjct: 1488 gtagtcgatcttcgactgcgagaacttgaggccgtgagccgtgctgacgaccacggtgcg 1429 Query: 401 gtcattcgccccgatg 416 ||| |||| ||||||| Sbjct: 1428 gtcgttcgtcccgatg 1413
>ref|NM_192166.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1578 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Minus Query: 456 accccggtatgcgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatg 515 |||||||| || |||||||||||||| || ||||| || || || |||||||||| |||| Sbjct: 1346 accccggtgtgtgggcaggcaaacattccggtgcggtcagcaagtgacattgcatccatg 1287 Query: 516 agctcctcctccgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgca 575 || || |||||||| || || | || || || | |||||||| || |||||||| ||| Sbjct: 1286 agttcttcctccgtagcttcctcaacaataccgtcagttgccttcagggcgaccactgca 1227 Query: 576 cggtcgac 583 |||||||| Sbjct: 1226 cggtcgac 1219
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 456 accccggtatgcgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatg 515 |||||||| || |||||||||||||| || ||||| || || || |||||||||| |||| Sbjct: 28647789 accccggtgtgtgggcaggcaaacattccggtgcggtcagcaagtgacattgcatccatg 28647848 Query: 516 agctcctcctccgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgca 575 || || |||||||| || || | || || || | |||||||| || |||||||| ||| Sbjct: 28647849 agttcttcctccgtagcttcctcaacaataccgtcagttgccttcagggcgaccactgca 28647908 Query: 576 cggtcgac 583 |||||||| Sbjct: 28647909 cggtcgac 28647916 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcagcagcagcaggaggacg 214 |||||||||||||||||||| Sbjct: 8056792 tcagcagcagcaggaggacg 8056773
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 456 accccggtatgcgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatg 515 |||||||| || |||||||||||||| || ||||| || || || |||||||||| |||| Sbjct: 30863 accccggtgtgtgggcaggcaaacattccggtgcggtcagcaagtgacattgcatccatg 30922 Query: 516 agctcctcctccgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgca 575 || || |||||||| || || | || || || | |||||||| || |||||||| ||| Sbjct: 30923 agttcttcctccgtagcttcctcaacaataccgtcagttgccttcagggcgaccactgca 30982 Query: 576 cggtcgac 583 |||||||| Sbjct: 30983 cggtcgac 30990
>dbj|AK109336.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C12, full insert sequence Length = 1880 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Minus Query: 456 accccggtatgcgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatg 515 |||||||| || |||||||||||||| || ||||| || || || |||||||||| |||| Sbjct: 1401 accccggtgtgtgggcaggcaaacattccggtgcggtcagcaagtgacattgcatccatg 1342 Query: 516 agctcctcctccgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgca 575 || || |||||||| || || | || || || | |||||||| || |||||||| ||| Sbjct: 1341 agttcttcctccgtagcttcctcaacaataccgtcagttgccttcagggcgaccactgca 1282 Query: 576 cggtcgac 583 |||||||| Sbjct: 1281 cggtcgac 1274
>dbj|AK073138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024E01, full insert sequence Length = 1902 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Minus Query: 456 accccggtatgcgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatg 515 |||||||| || |||||||||||||| || ||||| || || || |||||||||| |||| Sbjct: 1418 accccggtgtgtgggcaggcaaacattccggtgcggtcagcaagtgacattgcatccatg 1359 Query: 516 agctcctcctccgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgca 575 || || |||||||| || || | || || || | |||||||| || |||||||| ||| Sbjct: 1358 agttcttcctccgtagcttcctcaacaataccgtcagttgccttcagggcgaccactgca 1299 Query: 576 cggtcgac 583 |||||||| Sbjct: 1298 cggtcgac 1291
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 440 gagcgccgcgagcgcgaccccggtatgcgggcaggcaaacatgcc 484 ||||||||||||||| || ||||| |||||||||| |||||||| Sbjct: 1975124 gagcgccgcgagcgccacgccggtgtgcgggcaggtgaacatgcc 1975168 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 331 tctgatcgtggtagtcgatcttggactgggagaacttgaggccgtgcgc 379 |||| ||||||||| ||| |||| | | ||||||||||||||||||||| Sbjct: 1975015 tctggtcgtggtagccgaccttgaagtcggagaacttgaggccgtgcgc 1975063 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 cgccgcgagcgcgaccccgg 462 |||||||||||||||||||| Sbjct: 2886858 cgccgcgagcgcgaccccgg 2886839
>ref|NM_185677.1| Oryza sativa (japonica cultivar-group), Ozsa8028 predicted mRNA Length = 4848 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 193 ggtcagcagcagcaggaggacgaggg 218 |||||||||||||||||||| ||||| Sbjct: 118 ggtcagcagcagcaggaggaggaggg 143
>gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, complete sequence Length = 195273 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gaggggtcagcagcagcaggag 210 |||||||||||||||||||||| Sbjct: 128709 gaggggtcagcagcagcaggag 128688
>emb|CR456637.3| Platypus DNA sequence from clone XX-104A18, complete sequence Length = 110477 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacgagg 217 |||||||||||||||||||||| Sbjct: 25235 cagcagcagcaggaggacgagg 25256
>emb|CR388525.1| Gallus gallus finished cDNA, clone ChEST1020i2 Length = 787 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacgagg 217 |||||||||||||||||||||| Sbjct: 186 cagcagcagcaggaggacgagg 207
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacgagg 217 |||||||||||||||||||||| Sbjct: 18376021 cagcagcagcaggaggacgagg 18376042
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 193 ggtcagcagcagcaggaggacgaggg 218 |||||||||||||||||||| ||||| Sbjct: 3762107 ggtcagcagcagcaggaggaggaggg 3762132
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 193 ggtcagcagcagcaggaggacgaggg 218 |||||||||||||||||||| ||||| Sbjct: 156335 ggtcagcagcagcaggaggaggaggg 156360
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 193 ggtcagcagcagcaggaggacgaggg 218 |||||||||||||||||||| ||||| Sbjct: 20061 ggtcagcagcagcaggaggaggaggg 20086
>dbj|AK059573.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A04, full insert sequence Length = 1843 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacgagg 217 |||||||||||||||||||||| Sbjct: 212 cagcagcagcaggaggacgagg 233
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacgagg 217 |||||||||||||||||||||| Sbjct: 18302247 cagcagcagcaggaggacgagg 18302268
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacgagg 217 |||||||||||||||||||||| Sbjct: 27920 cagcagcagcaggaggacgagg 27941
>gb|BT018440.1| Zea mays clone EL01N0372H09.d mRNA sequence Length = 1857 Score = 42.1 bits (21), Expect = 2.0 Identities = 99/125 (79%) Strand = Plus / Minus Query: 456 accccggtatgcgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatg 515 ||||| ||||| ||||| |||||||| || ||||| || || || | | |||||| ||| Sbjct: 1378 accccagtatgtgggcaagcaaacatcccagtgcggtcagcaagcgccgttgcatccatt 1319 Query: 516 agctcctcctccgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgca 575 ||||||||||| || ||||| | || || || | || ||||| || |||||||||||| Sbjct: 1318 agctcctcctctgtagcctcctccacaataccgtcagtggccttcagcgcgaccaccgca 1259 Query: 576 cggtc 580 ||||| Sbjct: 1258 cggtc 1254
>gb|AC010919.11| Drosophila melanogaster clone BACR32K23, complete sequence Length = 198967 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 gcagcaggaggacgagggcat 221 ||||||||||||||||||||| Sbjct: 75961 gcagcaggaggacgagggcat 75941
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 gagcgccgcgagcgcgacccc 460 ||||||||||||||||||||| Sbjct: 782027 gagcgccgcgagcgcgacccc 782007
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 cgccgaagtcggccttcacgc 288 ||||||||||||||||||||| Sbjct: 3194661 cgccgaagtcggccttcacgc 3194681 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacga 215 |||||||||||||||||||| Sbjct: 32606332 cagcagcagcaggaggacga 32606351
>ref|XM_546389.2| PREDICTED: Canis familiaris similar to junctional adhesion molecule 3 precursor (LOC489271), mRNA Length = 2389 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 agcagcagcaggaggacgagg 217 ||||||||||||||||||||| Sbjct: 1103 agcagcagcaggaggacgagg 1083
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 gagcgccgcgagcgcgacccc 460 ||||||||||||||||||||| Sbjct: 2102289 gagcgccgcgagcgcgacccc 2102269
>emb|AL603834.6| Mouse DNA sequence from clone RP23-113D4 on chromosome 11 Contains the Rpa1 gene for replication protein A1, the 5' end of a novel gene and a CpG island, complete sequence Length = 67911 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 agctcctcctccgtggcctct 536 ||||||||||||||||||||| Sbjct: 17025 agctcctcctccgtggcctct 17045
>ref|NM_206750.1| Drosophila melanogaster CG15603-PA (CG15603) mRNA, complete cds Length = 1020 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 gcagcaggaggacgagggcat 221 ||||||||||||||||||||| Sbjct: 215 gcagcaggaggacgagggcat 235
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 gagcgccgcgagcgcgacccc 460 ||||||||||||||||||||| Sbjct: 1676692 gagcgccgcgagcgcgacccc 1676672
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 cgccgaagtcggccttcacgc 288 ||||||||||||||||||||| Sbjct: 3194772 cgccgaagtcggccttcacgc 3194792 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacga 215 |||||||||||||||||||| Sbjct: 32696842 cagcagcagcaggaggacga 32696861
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 cgccgaagtcggccttcacgc 288 ||||||||||||||||||||| Sbjct: 19534 cgccgaagtcggccttcacgc 19554
>gb|AY109760.1| Zea mays CL120_1 mRNA sequence Length = 1901 Score = 42.1 bits (21), Expect = 2.0 Identities = 99/125 (79%) Strand = Plus / Minus Query: 456 accccggtatgcgggcaggcaaacatgcctgtgcgatcggcgagggacattgcattcatg 515 ||||| ||||| ||||| |||||||| || ||||| || || || | | |||||| ||| Sbjct: 1410 accccagtatgtgggcaagcaaacatcccagtgcggtcagcaagcgccgttgcatccatt 1351 Query: 516 agctcctcctccgtggcctctgcgacgatgccatttgttgccttgagtgcgaccaccgca 575 ||||||||||| || ||||| | || || || | || ||||| || |||||||||||| Sbjct: 1350 agctcctcctctgtagcctcctccacaataccgtcagtggccttcagcgcgaccaccgca 1291 Query: 576 cggtc 580 ||||| Sbjct: 1290 cggtc 1286
>gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 of 74 of the complete sequence Length = 303344 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 gcagcaggaggacgagggcat 221 ||||||||||||||||||||| Sbjct: 243875 gcagcaggaggacgagggcat 243855
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 gagcgccgcgagcgcgacccc 460 ||||||||||||||||||||| Sbjct: 966504 gagcgccgcgagcgcgacccc 966524
>ref|XM_483040.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2678 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 catgagctcctcctccgtgg 531 |||||||||||||||||||| Sbjct: 653 catgagctcctcctccgtgg 634
>ref|XM_507273.1| PREDICTED Oryza sativa (japonica cultivar-group), P0419H09.37-1 mRNA Length = 3973 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 catgagctcctcctccgtgg 531 |||||||||||||||||||| Sbjct: 653 catgagctcctcctccgtgg 634
>ref|XM_469941.1| Oryza sativa (japonica cultivar-group), mRNA Length = 591 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacga 215 |||||||||||||||||||| Sbjct: 277 cagcagcagcaggaggacga 296
>ref|XM_468423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1077 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacga 215 |||||||||||||||||||| Sbjct: 520 cagcagcagcaggaggacga 539
>ref|XM_465863.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1578 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggtcagcagcagcaggagga 212 |||||||||||||||||||| Sbjct: 60 ggtcagcagcagcaggagga 41
>ref|XM_514358.1| PREDICTED: Pan troglodytes similar to mitochondrial carrier protein MGC4399 (LOC457919), mRNA Length = 1035 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 841 tggtgccctcttcccggagc 822
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 cagcagcagcaggaggacga 215 |||||||||||||||||||| Sbjct: 137575 cagcagcagcaggaggacga 137556
>ref|XM_981876.1| PREDICTED: Mus musculus hypothetical protein LOC675421 (LOC675421), mRNA Length = 612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 agctcctcctccgtggcctc 535 |||||||||||||||||||| Sbjct: 223 agctcctcctccgtggcctc 242
>gb|AF495714.1| Homo sapiens mitochondrial carrier protein mRNA, complete cds; nuclear gene for mitochondrial product Length = 1433 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 990 tggtgccctcttcccggagc 971
>ref|XM_532613.2| PREDICTED: Canis familiaris similar to protein tyrosine phosphatase, receptor type, D isoform 4 precursor, transcript variant 1 (LOC475389), mRNA Length = 6197 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ctgggagaacttgaggccgt 375 |||||||||||||||||||| Sbjct: 4059 ctgggagaacttgaggccgt 4040
>ref|XM_857945.1| PREDICTED: Canis familiaris similar to protein tyrosine phosphatase, receptor type, D isoform 4 precursor, transcript variant 6 (LOC475389), mRNA Length = 4908 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ctgggagaacttgaggccgt 375 |||||||||||||||||||| Sbjct: 2770 ctgggagaacttgaggccgt 2751
>ref|XM_857919.1| PREDICTED: Canis familiaris similar to protein tyrosine phosphatase, receptor type, D isoform 4 precursor, transcript variant 5 (LOC475389), mRNA Length = 4506 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ctgggagaacttgaggccgt 375 |||||||||||||||||||| Sbjct: 2395 ctgggagaacttgaggccgt 2376
>ref|XM_857873.1| PREDICTED: Canis familiaris similar to protein tyrosine phosphatase, receptor type, D isoform 4 precursor, transcript variant 3 (LOC475389), mRNA Length = 6170 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ctgggagaacttgaggccgt 375 |||||||||||||||||||| Sbjct: 4032 ctgggagaacttgaggccgt 4013
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcagcagcagcaggaggacg 214 |||||||||||||||||||| Sbjct: 20905 tcagcagcagcaggaggacg 20886
>gb|AC121835.2| Mus musculus BAC clone RP24-72L18 from 8, complete sequence Length = 225065 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 agctcctcctccgtggcctc 535 |||||||||||||||||||| Sbjct: 186554 agctcctcctccgtggcctc 186535
>emb|CR682616.2|CNS0FPNO Tetraodon nigroviridis full-length cDNA Length = 1099 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 tcagcagcagcaggaggacgaggg 218 |||||||||||||||||| ||||| Sbjct: 726 tcagcagcagcaggaggaggaggg 749
>emb|Z98747.1|HS37J18 Human DNA sequence from clone RP1-37J18 on chromosome 1p36.2-36.3 Contains two novel genes, complete sequence Length = 131427 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gctcctcctccgtggcctct 536 |||||||||||||||||||| Sbjct: 88986 gctcctcctccgtggcctct 89005
>emb|AL954705.14| Human DNA sequence from clone RP13-15M17 on chromosome 1, complete sequence Length = 66275 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 13410 tggtgccctcttcccggagc 13391
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004G10 Length = 150379 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcagcagcagcaggaggacg 214 |||||||||||||||||||| Sbjct: 53443 tcagcagcagcaggaggacg 53424
>ref|NM_032315.2| Homo sapiens PNC1 protein (BMSC-MCP), mRNA Length = 1476 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 1022 tggtgccctcttcccggagc 1003
>emb|CR620898.1| full-length cDNA clone CS0DI033YL16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1413 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 1017 tggtgccctcttcccggagc 998
>emb|CR595626.1| full-length cDNA clone CS0DI001YM08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1483 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 1073 tggtgccctcttcccggagc 1054
>emb|CR594441.1| full-length cDNA clone CS0DC017YE15 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1427 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 1022 tggtgccctcttcccggagc 1003
>emb|CR593565.1| full-length cDNA clone CS0DL009YB13 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1427 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 1017 tggtgccctcttcccggagc 998
>ref|XM_941892.1| PREDICTED: Homo sapiens similar to mitochondrial carrier protein MGC4399 (LOC654244), mRNA Length = 2072 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 999 tggtgccctcttcccggagc 980
>ref|XM_930446.1| PREDICTED: Homo sapiens similar to mitochondrial carrier protein MGC4399, transcript variant 1 (LOC653698), mRNA Length = 2095 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 1022 tggtgccctcttcccggagc 1003
>ref|XM_934845.1| PREDICTED: Homo sapiens similar to mitochondrial carrier protein MGC4399, transcript variant 2 (LOC653698), mRNA Length = 2017 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 944 tggtgccctcttcccggagc 925
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 catgagctcctcctccgtgg 531 |||||||||||||||||||| Sbjct: 23996282 catgagctcctcctccgtgg 23996263
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacga 215 |||||||||||||||||||| Sbjct: 35152270 cagcagcagcaggaggacga 35152289 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggtcagcagcagcaggagga 212 |||||||||||||||||||| Sbjct: 17962036 ggtcagcagcagcaggagga 17962017
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 cttgaggacgtccatgacggcgcc 271 ||||||||||||||||||| |||| Sbjct: 6806910 cttgaggacgtccatgacgacgcc 6806887 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 agcagcaggaggacgagggc 219 |||||||||||||||||||| Sbjct: 3858848 agcagcaggaggacgagggc 3858829
>ref|XM_341579.2| PREDICTED: Rattus norvegicus Niemann-Pick disease, type C1 (predicted) (Npc1_predicted), mRNA Length = 3850 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 cagcagcagcaggaggacgagggc 219 |||||||||||||||| ||||||| Sbjct: 55 cagcagcagcaggaggccgagggc 32
>gb|AC135977.5| Homo sapiens chromosome 11, clone RP11-61N20, complete sequence Length = 152868 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 102183 tggtgccctcttcccggagc 102164
>gb|AC118942.4| Homo sapiens chromosome 11, clone RP11-15P23, complete sequence Length = 161527 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 13775 tggtgccctcttcccggagc 13756
>dbj|AP004376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0481F05 Length = 139739 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 catgagctcctcctccgtgg 531 |||||||||||||||||||| Sbjct: 23682 catgagctcctcctccgtgg 23663
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacga 215 |||||||||||||||||||| Sbjct: 47626 cagcagcagcaggaggacga 47645
>dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_B06 Length = 99637 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggtcagcagcagcaggagga 212 |||||||||||||||||||| Sbjct: 96669 ggtcagcagcagcaggagga 96650
>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F04 Length = 139563 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggtcagcagcagcaggagga 212 |||||||||||||||||||| Sbjct: 23630 ggtcagcagcagcaggagga 23611
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 catgagctcctcctccgtgg 531 |||||||||||||||||||| Sbjct: 129433 catgagctcctcctccgtgg 129414
>dbj|AK025158.1| Homo sapiens cDNA: FLJ21505 fis, clone COL05708 Length = 2494 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 ctcctcctccgtggcctctg 537 |||||||||||||||||||| Sbjct: 128 ctcctcctccgtggcctctg 109
>dbj|AK106020.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-C01, full insert sequence Length = 1450 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacgagggc 219 ||||||||||||||||| |||||| Sbjct: 452 cagcagcagcaggaggaggagggc 475
>dbj|AK071095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079N14, full insert sequence Length = 1460 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 cagcagcagcaggaggacgagggc 219 ||||||||||||||||| |||||| Sbjct: 462 cagcagcagcaggaggaggagggc 485
>dbj|AK068243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149G12, full insert sequence Length = 3974 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 catgagctcctcctccgtgg 531 |||||||||||||||||||| Sbjct: 654 catgagctcctcctccgtgg 635
>gb|BC073135.1| Homo sapiens PNC1 protein, mRNA (cDNA clone MGC:87888 IMAGE:6172562), complete cds Length = 1462 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 1008 tggtgccctcttcccggagc 989
>gb|BC004991.1| Homo sapiens PNC1 protein, mRNA (cDNA clone MGC:4399 IMAGE:2905957), complete cds Length = 1482 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 992 tggtgccctcttcccggagc 973
>dbj|AK064883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K02, full insert sequence Length = 2677 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 catgagctcctcctccgtgg 531 |||||||||||||||||||| Sbjct: 652 catgagctcctcctccgtgg 633
>gb|AF118825.1|AF118825 Ilyanassa obsoleta myosin II heavy chain mRNA, partial cds Length = 1620 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 ggccatgtcctcgatcttct 333 |||||||||||||||||||| Sbjct: 432 ggccatgtcctcgatcttct 413
>dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, section 103/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 439 agagcgccgcgagcgcgaccccgg 462 ||||||||||||||| |||||||| Sbjct: 246654 agagcgccgcgagcgtgaccccgg 246677
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gagaacttgaggccgtgcgc 379 |||||||||||||||||||| Sbjct: 1901124 gagaacttgaggccgtgcgc 1901143
>emb|AJ880283.1| Homo sapiens mRNA for PNC1 protein Length = 1462 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 1008 tggtgccctcttcccggagc 989
>gb|AC153017.4| Mus musculus BAC clone RP23-188L21 from chromosome 8, complete sequence Length = 242385 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 agctcctcctccgtggcctc 535 |||||||||||||||||||| Sbjct: 20307 agctcctcctccgtggcctc 20288
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 cagcagcagcaggaggacgagggc 219 ||||||||||||||||| |||||| Sbjct: 155155 cagcagcagcaggaggaggagggc 155132
>dbj|AP001469.1| Homo sapiens genomic DNA, chromosome 21q22.3, clone:B178H12, telomere region, complete sequence Length = 47859 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 439 agagcgccgcgagcgcgaccccgg 462 ||||||||||||||| |||||||| Sbjct: 7604 agagcgccgcgagcgtgaccccgg 7627
>emb|AL663100.12| Human DNA sequence from clone RP5-1052J3 on chromosome 1, complete sequence Length = 80421 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 tggtgccctcttcccggagc 434 |||||||||||||||||||| Sbjct: 56930 tggtgccctcttcccggagc 56949 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,563,761 Number of Sequences: 3902068 Number of extensions: 4563761 Number of successful extensions: 93484 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91936 Number of HSP's gapped (non-prelim): 1537 length of query: 584 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 561 effective length of database: 17,143,297,704 effective search space: 9617390011944 effective search space used: 9617390011944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)