ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal2i11 |
|---|---|
| Clone Library Name | barley_pub |
>UCHL3_MOUSE (Q9JKB1) Ubiquitin carboxyl-terminal hydrolase isozyme L3 (EC| 3.4.19.12) (UCH-L3) (Ubiquitin thioesterase L3) Length = 230 Score = 137 bits (345), Expect = 3e-32 Identities = 71/152 (46%), Positives = 94/152 (61%), Gaps = 3/152 (1%) Frame = -3 Query: 637 GKDSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAV 458 G+D VYF KQTI NACGT+G+IHAI N + GS KF +++ M P +RA Sbjct: 77 GQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERAK 136 Query: 457 FLEEDDEMEGAHSVAATAGETDA---NVEVSDHFVCFSCVDGELYELDGRKSKPISHGPS 287 FLE D + H +A G+T+A + +V HF+ VDG LYELDGRK PI+HG + Sbjct: 137 FLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGKT 196 Query: 286 SPETLLQDAAKVIKARIATNPDSMNFNVMALS 191 S ETLL+DA +V K + +PD + FN +ALS Sbjct: 197 SDETLLEDAIEVCKKFMERDPDELRFNAIALS 228
>UCHL3_HUMAN (P15374) Ubiquitin carboxyl-terminal hydrolase isozyme L3 (EC| 3.4.19.12) (UCH-L3) (Ubiquitin thioesterase L3) Length = 230 Score = 135 bits (341), Expect = 9e-32 Identities = 70/152 (46%), Positives = 94/152 (61%), Gaps = 3/152 (1%) Frame = -3 Query: 637 GKDSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAV 458 G+D VYF KQTI NACGT+G+IHAI N + GS KF +++ M P +RA Sbjct: 77 GQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERAR 136 Query: 457 FLEEDDEMEGAHSVAATAGETDA---NVEVSDHFVCFSCVDGELYELDGRKSKPISHGPS 287 +LE D + H +A G+T+A + +V HF+ VDG LYELDGRK PI+HG + Sbjct: 137 YLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGET 196 Query: 286 SPETLLQDAAKVIKARIATNPDSMNFNVMALS 191 S ETLL+DA +V K + +PD + FN +ALS Sbjct: 197 SDETLLEDAIEVCKKFMERDPDELRFNAIALS 228
>UCHL3_RAT (Q91Y78) Ubiquitin carboxyl-terminal hydrolase isozyme L3 (EC| 3.4.19.12) (UCH-L3) (Ubiquitin thioesterase L3) Length = 230 Score = 133 bits (335), Expect = 4e-31 Identities = 70/152 (46%), Positives = 93/152 (61%), Gaps = 3/152 (1%) Frame = -3 Query: 637 GKDSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAV 458 G+D VYF KQTI NACGT+G+IHAI N + GS KF +++ M P +RA Sbjct: 77 GQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSALKKFLEESVAMSPEERAR 136 Query: 457 FLEEDDEMEGAHSVAATAGETDA---NVEVSDHFVCFSCVDGELYELDGRKSKPISHGPS 287 LE D + H +A G+T+A + +V HF+ VDG LYELDGRK PI+HG + Sbjct: 137 HLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGKT 196 Query: 286 SPETLLQDAAKVIKARIATNPDSMNFNVMALS 191 S ETLL+DA +V K + +PD + FN +ALS Sbjct: 197 SDETLLEDAIEVCKKFMERDPDELRFNAIALS 228
>UCHL1_PIG (Q6SEG5) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) Length = 223 Score = 130 bits (327), Expect = 4e-30 Identities = 62/150 (41%), Positives = 94/150 (62%) Frame = -3 Query: 637 GKDSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAV 458 G++ + KVYF KQTIGN+CGT+G+IHA+ N ++ +GS +F +T + P RA Sbjct: 72 GQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAK 131 Query: 457 FLEEDDEMEGAHSVAATAGETDANVEVSDHFVCFSCVDGELYELDGRKSKPISHGPSSPE 278 E+++ ++ AH A G+ + +V+ HF+ F+ VDG LYELDGR P++HG SS + Sbjct: 132 CFEKNEAIQAAHDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGASSED 191 Query: 277 TLLQDAAKVIKARIATNPDSMNFNVMALSK 188 +LLQDAAKV + + F+ +AL K Sbjct: 192 SLLQDAAKVCREFTEREQGEVRFSAVALCK 221
>UCHL1_MACFA (Q60HC8) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) Length = 223 Score = 130 bits (327), Expect = 4e-30 Identities = 64/150 (42%), Positives = 92/150 (61%) Frame = -3 Query: 637 GKDSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAV 458 G++ + KVYF KQTIGN+CGT+G+IHA+ N + +GS +F +T M P RA Sbjct: 72 GQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLGFEDGSVLKQFLSETEKMSPEDRAK 131 Query: 457 FLEEDDEMEGAHSVAATAGETDANVEVSDHFVCFSCVDGELYELDGRKSKPISHGPSSPE 278 E+++ ++ AH A G+ + +V+ HF+ F+ VDG LYELDGR P++HG SS Sbjct: 132 CFEKNEAIQAAHDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGASSEG 191 Query: 277 TLLQDAAKVIKARIATNPDSMNFNVMALSK 188 TLLQDAAKV + + F+ +AL K Sbjct: 192 TLLQDAAKVCREFTEREQGEVRFSAVALCK 221
>UCHL1_HUMAN (P09936) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 130 bits (327), Expect = 4e-30 Identities = 63/150 (42%), Positives = 93/150 (62%) Frame = -3 Query: 637 GKDSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAV 458 G++ + KVYF KQTIGN+CGT+G+IHA+ N + +GS +F +T M P RA Sbjct: 72 GQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLGFEDGSVLKQFLSETEKMSPEDRAK 131 Query: 457 FLEEDDEMEGAHSVAATAGETDANVEVSDHFVCFSCVDGELYELDGRKSKPISHGPSSPE 278 E+++ ++ AH A G+ + +V+ HF+ F+ VDG LYELDGR P++HG SS + Sbjct: 132 CFEKNEAIQAAHDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGASSED 191 Query: 277 TLLQDAAKVIKARIATNPDSMNFNVMALSK 188 TLL+DAAKV + + F+ +AL K Sbjct: 192 TLLKDAAKVCREFTEREQGEVRFSAVALCK 221
>UCHL1_RAT (Q00981) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 129 bits (325), Expect = 6e-30 Identities = 62/150 (41%), Positives = 94/150 (62%) Frame = -3 Query: 637 GKDSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAV 458 G++ + KVYF KQTIGN+CGT+G+IHA+ N ++ +GS +F +T + P RA Sbjct: 72 GQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAK 131 Query: 457 FLEEDDEMEGAHSVAATAGETDANVEVSDHFVCFSCVDGELYELDGRKSKPISHGPSSPE 278 E+++ ++ AH A G+ + +V+ HF+ F+ VDG LYELDGR P++HG SS + Sbjct: 132 CFEKNEAIQAAHDSVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGASSED 191 Query: 277 TLLQDAAKVIKARIATNPDSMNFNVMALSK 188 +LLQDAAKV + + F+ +AL K Sbjct: 192 SLLQDAAKVCREFTEREQGEVRFSAVALCK 221
>UCHL1_MOUSE (Q9R0P9) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 129 bits (325), Expect = 6e-30 Identities = 62/150 (41%), Positives = 94/150 (62%) Frame = -3 Query: 637 GKDSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAV 458 G++ + KVYF KQTIGN+CGT+G+IHA+ N ++ +GS +F +T + P RA Sbjct: 72 GQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAK 131 Query: 457 FLEEDDEMEGAHSVAATAGETDANVEVSDHFVCFSCVDGELYELDGRKSKPISHGPSSPE 278 E+++ ++ AH A G+ + +V+ HF+ F+ VDG LYELDGR P++HG SS + Sbjct: 132 CFEKNEAIQAAHDSVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGASSED 191 Query: 277 TLLQDAAKVIKARIATNPDSMNFNVMALSK 188 +LLQDAAKV + + F+ +AL K Sbjct: 192 SLLQDAAKVCREFTEREQGEVRFSAVALCK 221
>UCHL1_HORSE (Q9GM50) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 129 bits (325), Expect = 6e-30 Identities = 62/150 (41%), Positives = 93/150 (62%) Frame = -3 Query: 637 GKDSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAV 458 G++ + KVYF KQTIGN+CGT+G+IHA+ N ++ +GS +F +T + P RA Sbjct: 72 GQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAK 131 Query: 457 FLEEDDEMEGAHSVAATAGETDANVEVSDHFVCFSCVDGELYELDGRKSKPISHGPSSPE 278 E+++ ++ AH A G+ + +V+ HF+ F+ VDG LYELDGR P++HG SS + Sbjct: 132 CFEKNEAIQAAHDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGASSED 191 Query: 277 TLLQDAAKVIKARIATNPDSMNFNVMALSK 188 LLQDAAKV + + F+ +AL K Sbjct: 192 LLLQDAAKVCREFTEREQGEVRFSAVALCK 221
>UCHL4_MOUSE (P58321) Ubiquitin carboxyl-terminal hydrolase isozyme L4 (EC| 3.4.19.12) (UCH-L4) (Ubiquitin thioesterase L4) Length = 233 Score = 128 bits (322), Expect = 1e-29 Identities = 69/155 (44%), Positives = 92/155 (59%), Gaps = 6/155 (3%) Frame = -3 Query: 637 GKDSNKKVYFTKQTIGNACGTVG---VIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQ 467 G+D VYF KQTI NACGT+G +IHAI N + GS KF +++ M P + Sbjct: 77 GQDVTSSVYFMKQTISNACGTIGTIGLIHAIANNKDKVHFESGSTLKKFLEESVSMSPEE 136 Query: 466 RAVFLEEDDEMEGAHSVAATAGETDA---NVEVSDHFVCFSCVDGELYELDGRKSKPISH 296 RA +LE D + H +A G+T+A + +V HF+ VDG LYELDG K PI+H Sbjct: 137 RAKYLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGWKPFPINH 196 Query: 295 GPSSPETLLQDAAKVIKARIATNPDSMNFNVMALS 191 G +S ETLL+D KV K + +PD + FN +ALS Sbjct: 197 GKTSDETLLEDVIKVCKKFMERDPDELRFNAIALS 231
>UCHL_APLCA (O01391) Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)| (Ubiquitin thioesterase) Length = 214 Score = 119 bits (297), Expect = 1e-26 Identities = 60/140 (42%), Positives = 86/140 (61%), Gaps = 3/140 (2%) Frame = -3 Query: 631 DSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAVFL 452 D +Y+TKQTIGNACGTV ++HA+ N + I +F F ++T ++P +RA L Sbjct: 74 DYPDSLYYTKQTIGNACGTVAIVHALANNENVIPFDAAKHFKTFLEKTKPLNPEERAKHL 133 Query: 451 EEDDEMEGAHSVAATAGETDA---NVEVSDHFVCFSCVDGELYELDGRKSKPISHGPSSP 281 E+D+ M AH A G+T A + V HFV +G LYELDGRK P+ HG +S Sbjct: 134 EQDNLMGAAHGDCAQEGDTQAPSQDEHVKSHFVALVHCNGTLYELDGRKEAPVVHGTTSA 193 Query: 280 ETLLQDAAKVIKARIATNPD 221 +T L+DAA+V+K +A +P+ Sbjct: 194 DTFLEDAAEVVKKFMARDPE 213
>UCHL_DROME (P35122) Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)| (Ubiquitin thioesterase) Length = 227 Score = 108 bits (270), Expect = 1e-23 Identities = 58/144 (40%), Positives = 90/144 (62%), Gaps = 2/144 (1%) Frame = -3 Query: 616 VYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAVFLEEDDE 437 +++ +Q NACGTV +IH++ N ++ + G D F ++TA + P +R LE+D++ Sbjct: 82 LFYMRQFTHNACGTVALIHSVANN-KEVDIDRGVLKD-FLEKTASLSPEERGRALEKDEK 139 Query: 436 MEGAHSVAATAGETDA--NVEVSDHFVCFSCVDGELYELDGRKSKPISHGPSSPETLLQD 263 H A G+T+A + +V HF+ +G LYELDGRKS PI HGP+S ET ++D Sbjct: 140 FTADHEALAQEGQTNAANHEKVIHHFIALVNKEGTLYELDGRKSFPIKHGPTSEETFVKD 199 Query: 262 AAKVIKARIATNPDSMNFNVMALS 191 AAKV K +A +P+ + F V+AL+ Sbjct: 200 AAKVCKEFMARDPNEVRFTVLALT 223
>UBLH1_SCHPO (Q10171) Probable ubiquitin carboxyl-terminal hydrolase 1 (EC| 3.1.2.15) Length = 222 Score = 80.9 bits (198), Expect = 3e-15 Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 10/158 (6%) Frame = -3 Query: 634 KDSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAVF 455 KDS+K +++ QTI NACGT+G++HA+ N K+ E + + +RA Sbjct: 67 KDSDKVLWYP-QTIPNACGTIGLLHAVSNGELRRKVNENDFIKSLIRTAEGSSIEERAKL 125 Query: 454 LEEDDEMEGAHSVAATAGE------TDANVEVSDHFVCF----SCVDGELYELDGRKSKP 305 +E+ E+E H AA AG ++ +VE HF+CF S D YELDGR+ P Sbjct: 126 IEDSKELEALH--AAFAGPPLEVEGSEEDVETDLHFICFVKGKSKDDNHFYELDGRQEGP 183 Query: 304 ISHGPSSPETLLQDAAKVIKARIATNPDSMNFNVMALS 191 + H + L + VIK I + DS F+++A++ Sbjct: 184 VQHSEIESDLLNAEVLSVIKNYI-QSIDSPFFSLVAIT 220
>UBLH2_SCHPO (Q9UUB6) Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15)| Length = 300 Score = 72.0 bits (175), Expect = 2e-12 Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%) Frame = -3 Query: 631 DSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAVFL 452 DS ++F KQ I NAC T ++ + N + +I L G+ +F + + P + L Sbjct: 67 DSMDNIFFAKQVINNACATQALLSVLLNHSDEIDL--GTTLSEFKDFSKTLPPELKGEAL 124 Query: 451 EEDDEMEGAHSVAATAG-----ETDANVEVSD--HFVCFSCVDGELYELDGRKSKPISHG 293 + + H+ A + E A + + HF+ ++ ++ YELDG ++ PI+HG Sbjct: 125 GNSEHIRCCHNSFARSDPFISEEVRAATDEDEVYHFIAYTNINNVFYELDGLQAAPINHG 184 Query: 292 PSSPETLLQDAAKVIKARIAT-NPDSMNFNVMALSK 188 + E + A VI+ARIA +P + FN+M + K Sbjct: 185 SCTKEEFAEKAVSVIQARIANYDPAEIRFNLMVICK 220
>UCHL5_BOVIN (Q9XSJ0) Ubiquitin carboxyl-terminal hydrolase isozyme L5 (EC| 3.4.19.12) (UCH-L5) (Ubiquitin thioesterase L5) (Ubiquitin C-terminal hydrolase UCH37) Length = 328 Score = 63.2 bits (152), Expect = 7e-10 Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 8/149 (5%) Frame = -3 Query: 616 VYFTKQTIGNACGTVGVIHAIGNAA-SDIKLVEGSYFDKFYKQTADMDPVQRAVFLEEDD 440 ++F KQ I NAC T ++ + N D+ L G +F + + D + + L D Sbjct: 77 IFFAKQVINNACATQAIVSVLLNCTHQDVHL--GETLSEFKEFSQSFDAAMKGLALSNSD 134 Query: 439 EMEGAHSVAATA------GETDANVEVSDHFVCFSCVDGELYELDGRKSKPISHGPSSPE 278 + H+ A +T A E + HFV + V+G LYELDG + PI G + + Sbjct: 135 VIRQVHNSFARQQMFEFDAKTAAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD 194 Query: 277 TLLQDAAKVIKARIAT-NPDSMNFNVMAL 194 + VI+ RI + + FN+MA+ Sbjct: 195 DWISAVRPVIEKRIQKYSEGEIRFNLMAI 223
>UCHL5_MOUSE (Q9WUP7) Ubiquitin carboxyl-terminal hydrolase isozyme L5 (EC| 3.4.19.12) (UCH-L5) (Ubiquitin thioesterase L5) (Ubiquitin C-terminal hydrolase UCH37) Length = 329 Score = 62.4 bits (150), Expect = 1e-09 Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 8/149 (5%) Frame = -3 Query: 616 VYFTKQTIGNACGTVGVIHAIGNAA-SDIKLVEGSYFDKFYKQTADMDPVQRAVFLEEDD 440 ++F KQ I NAC T ++ + N D+ L G +F + + D + + L D Sbjct: 77 IFFAKQVINNACATQAIVSVLLNCTHQDVHL--GETLSEFKEFSQSFDAAMKGLALSNSD 134 Query: 439 EMEGAHSVAATAG------ETDANVEVSDHFVCFSCVDGELYELDGRKSKPISHGPSSPE 278 + H+ A +T A E + HFV + V+G LYELDG + PI G + + Sbjct: 135 VIRQVHNSFARQQMFEFDTKTPAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD 194 Query: 277 TLLQDAAKVIKARIAT-NPDSMNFNVMAL 194 + VI+ RI + + FN+MA+ Sbjct: 195 DWITAVRPVIEKRIQKYSEGEIRFNLMAI 223
>UCHL5_HUMAN (Q9Y5K5) Ubiquitin carboxyl-terminal hydrolase isozyme L5 (EC| 3.4.19.12) (UCH-L5) (Ubiquitin thioesterase L5) (Ubiquitin C-terminal hydrolase UCH37) Length = 329 Score = 62.4 bits (150), Expect = 1e-09 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%) Frame = -3 Query: 616 VYFTKQTIGNACGTVGVIHAIGNAA-SDIKLVEGSYFDKFYKQTADMDPVQRAVFLEEDD 440 ++F KQ I NAC T ++ + N D+ L G +F + + D + + L D Sbjct: 77 IFFAKQVINNACATQAIVSVLLNCTHQDVHL--GETLSEFKEFSQSFDAAMKGLALSNSD 134 Query: 439 EMEGAHSVAATAG------ETDANVEVSDHFVCFSCVDGELYELDGRKSKPISHGPSSPE 278 + H+ A +T A E + HFV + V+G LYELDG + PI G + + Sbjct: 135 VIRQVHNSFARQQMFEFDTKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD 194 Query: 277 TLLQDAAKVIKARIAT-NPDSMNFNVMAL 194 VI+ RI + + FN+MA+ Sbjct: 195 DWFSAVRPVIEKRIQKYSEGEIRFNLMAI 223
>UBH4_CAEEL (Q09444) Probable ubiquitin carboxyl-terminal hydrolase ubh-4 (EC| 3.4.19.12) (Ubiquitin C-terminal hydrolase family 1 member 4) (Ubiquitin thioesterase 4) Length = 321 Score = 57.4 bits (137), Expect = 4e-08 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 8/157 (5%) Frame = -3 Query: 640 GGKDSNKKVYFTKQTIGNACGTVGVIHAIGNAA-SDIKLVEGSYFDKFYKQTADMDPVQR 464 G + ++F QTI NAC T +I+ + N +D+KL G+ +++ + D+DP R Sbjct: 64 GIPSDKQNIFFAHQTIQNACATQALINLLMNVEDTDVKL--GNILNQYKEFAIDLDPNTR 121 Query: 463 AVFLEEDDEMEGAHSVAA--TAGETD---ANVEVSDHFVCFSCVDGELYELDGRKSKPIS 299 L +E+ H+ + T E D E + HFV + + ++YELDG + P+ Sbjct: 122 GHCLSNSEEIRTVHNSFSRQTLFELDIKGGESEDNYHFVTYVPIGNKVYELDGLRELPLE 181 Query: 298 HGPSSPETLLQDAAK-VIKARIAT-NPDSMNFNVMAL 194 E +A K VI+ R+ + + FN+MAL Sbjct: 182 VAEFQKEQDWIEAIKPVIQQRMQKYSEGEITFNLMAL 218
>UBL1_YEAST (P35127) Ubiquitin carboxyl-terminal hydrolase YUH1 (EC 3.4.19.12)| (Ubiquitin thioesterase) Length = 236 Score = 50.4 bits (119), Expect = 5e-06 Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 14/159 (8%) Frame = -3 Query: 628 SNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAVFLE 449 S+ V + KQ++ NACG ++H++ N S L GS D F K +D + Sbjct: 75 SSYDVIWFKQSVKNACGLYAILHSLSNNQS--LLEPGSDLDNFLKSQSDTSSSKNRFDDV 132 Query: 448 EDDEM------EGAHSVAATAGET-DANVEVSDHFVCFSCVDGELYELDGRK-SKPISHG 293 D+ E + + E +A + + H++ + +G ++ELDGR S P+ G Sbjct: 133 TTDQFVLNVIKENVQTFSTGQSEAPEATADTNLHYITYVEENGGIFELDGRNLSGPLYLG 192 Query: 292 PSSPETLLQDAAKVIKARIAT------NPDSMNFNVMAL 194 S P ++++ R+A+ D +NF ++ L Sbjct: 193 KSDPTATDLIEQELVRVRVASYMENANEEDVLNFAMLGL 231
>BAP1_MOUSE (Q99PU7) Ubiquitin carboxyl-terminal hydrolase BAP1 (EC 3.4.19.12)| (BRCA1-associated protein 1) (Ubiquitin C-terminal hydrolase X4) (UCH-X4) Length = 728 Score = 48.1 bits (113), Expect = 2e-05 Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 16/162 (9%) Frame = -3 Query: 631 DSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAVFL 452 D ++F Q I N+C T ++ + N S++ L G + T P + + Sbjct: 75 DIVNNMFFAHQLIPNSCATHALLSVLLNC-SNVDL--GPTLSRMKDFTKGFSPESKGYAI 131 Query: 451 EEDDEMEGAHSVAATA----------GETDANVEVSDHFVCFSCVDGELYELDGRKSKPI 302 E+ AH+ A G + + HFV + + G L+ELDG K PI Sbjct: 132 GNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPI 191 Query: 301 SHGP-SSPETLLQDAAKVIKARI----ATNP-DSMNFNVMAL 194 HGP E A +VI RI A P + FN+MA+ Sbjct: 192 DHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAV 233
>BAP1_HUMAN (Q92560) Ubiquitin carboxyl-terminal hydrolase BAP1 (EC 3.4.19.12)| (BRCA1-associated protein 1) (Cerebral protein 6) Length = 729 Score = 48.1 bits (113), Expect = 2e-05 Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 16/162 (9%) Frame = -3 Query: 631 DSNKKVYFTKQTIGNACGTVGVIHAIGNAASDIKLVEGSYFDKFYKQTADMDPVQRAVFL 452 D ++F Q I N+C T ++ + N +S + G + T P + + Sbjct: 75 DIVNNMFFAHQLIPNSCATHALLSVLLNCSS---VDLGPTLSRMKDFTKGFSPESKGYAI 131 Query: 451 EEDDEMEGAHSVAATA----------GETDANVEVSDHFVCFSCVDGELYELDGRKSKPI 302 E+ AH+ A G + + HFV + + G L+ELDG K PI Sbjct: 132 GNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPI 191 Query: 301 SHGP-SSPETLLQDAAKVIKARI----ATNP-DSMNFNVMAL 194 HGP E A +VI RI A P + FN+MA+ Sbjct: 192 DHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAV 233
>FAS_RAT (P12785) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl-ca Length = 2505 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -3 Query: 445 DDEMEGAHSVAATAGETDANVEVSDHFVCFSCVDGEL 335 +D G+ S +AT DA+ E SDH++ C+DG + Sbjct: 848 EDFPNGSSSSSATVYNIDASSESSDHYLVDHCIDGRV 884
>PTHP_VIBCH (Q9KTD6) Phosphocarrier protein HPr (Histidine-containing protein)| Length = 85 Score = 31.6 bits (70), Expect = 2.3 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -3 Query: 667 YDASATSAAGGKDSNKKVYFTKQTIGNACGTVGVIHAIGNAASD 536 +DA T + GK ++ K F QT+G GTV I A G A + Sbjct: 29 FDADITVTSNGKSASAKSLFKLQTLGLVKGTVVTISAEGPQAKE 72
>FAS_BOVIN (Q71SP7) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2513 Score = 30.4 bits (67), Expect = 5.2 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 445 DDEMEGAHSVAATAGETDANVEVSDHFVCFSCVDGEL 335 +D G+ S +AT + D N E DH++ C+DG + Sbjct: 848 EDFPSGSSSSSATIYKIDINPESPDHYLVDHCIDGRI 884
>FAS_MOUSE (P19096) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2504 Score = 30.0 bits (66), Expect = 6.7 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 445 DDEMEGAHSVAATAGETDANVEVSDHFVCFSCVDGEL 335 +D G+ S +AT DA+ E DH++ C+DG + Sbjct: 848 EDFPNGSSSSSATVYSIDASPESPDHYLVDHCIDGRV 884
>K1683_HUMAN (Q9H0B3) Protein KIAA1683| Length = 1180 Score = 29.6 bits (65), Expect = 8.8 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = -1 Query: 675 WRNTMLLPPRRQGARIQTRRCTLQNRLLAMLVEQ 574 WRN ++PPRR G + + + + R+LA++ Q Sbjct: 901 WRNKAVVPPRRSGEPMVSMQAAEEIRILAVITIQ 934
>SPR2G_HUMAN (Q9BYE4) Small proline-rich protein 2G (SPR-2G)| Length = 73 Score = 29.6 bits (65), Expect = 8.8 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +1 Query: 589 CQ*SVL*STPSCLNPCPLPPRWQKHRIPPP 678 CQ + TP C PCP PP+ + +PPP Sbjct: 12 CQPPPVCPTPKCPEPCP-PPKCPEPYLPPP 40 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,414,315 Number of Sequences: 219361 Number of extensions: 1878733 Number of successful extensions: 6557 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 6320 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6537 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
