ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39o17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193697.1| Oryza sativa (japonica cultivar-group), predic... 549 e-153
2dbj|AK067297.1| Oryza sativa (japonica cultivar-group) cDNA clon... 549 e-153
3dbj|AB050885.1| Oryza sativa (japonica cultivar-group) OsTATC mR... 549 e-153
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
5dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
6ref|NM_126173.3| Arabidopsis thaliana APG2 (ALBINO AND PALE GREE... 66 2e-07
7gb|AY056347.1| Arabidopsis thaliana putative TATC protein (At2g0... 66 2e-07
8gb|AF360172.1| Arabidopsis thaliana putative TATC protein (At2g0... 66 2e-07
9gb|AC006837.16| Arabidopsis thaliana chromosome 2 BAC F23H14 gen... 66 2e-07
10emb|BX820614.1|CNS0A9P2 Arabidopsis thaliana Full-length cDNA Co... 66 2e-07
11emb|BX821288.1|CNS0A98C Arabidopsis thaliana Full-length cDNA Co... 66 2e-07
12gb|AY084784.1| Arabidopsis thaliana clone 117779 mRNA, complete ... 66 2e-07
13dbj|AB054096.1| Arabidopsis thaliana apg2 mRNA for cpTatC, compl... 66 2e-07
14gb|AF145045.1|AF145045 Arabidopsis thaliana TATC mRNA, complete cds 66 2e-07
15emb|BX819534.1|CNS0A9W3 Arabidopsis thaliana Full-length cDNA Co... 64 7e-07
16emb|BX819468.1|CNS0A9WM Arabidopsis thaliana Full-length cDNA Co... 64 7e-07
17emb|BX819191.1|CNS0A9X4 Arabidopsis thaliana Full-length cDNA Co... 64 7e-07
18emb|BX820908.1|CNS0A9P4 Arabidopsis thaliana Full-length cDNA Co... 64 7e-07
19emb|BX821977.1|CNS0AAB7 Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
20emb|BX821937.1|CNS0A966 Arabidopsis thaliana Full-length cDNA Co... 56 2e-04
21gb|AF284759.1|AF284759 Pisum sativum TatC (tatC) mRNA, complete ... 54 7e-04
22ref|XM_467642.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.16
23ref|XM_506957.1| PREDICTED Oryza sativa (japonica cultivar-group... 46 0.16
24dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
25dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
26dbj|AK105446.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.16
27dbj|AK101108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.16
28gb|AC150388.2| Branchiostoma floridae clone CH302-106N18, comple... 42 2.5
29ref|NM_032446.1| Homo sapiens multiple EGF-like-domains 10 (MEGF... 42 2.5
30gb|AF411806.1| Lycopersicon esculentum BAC clone Clemson_Id 2O7,... 42 2.5
31emb|CR749437.1| Homo sapiens mRNA; cDNA DKFZp781K1852 (from clon... 42 2.5
32gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, comp... 42 2.5
33gb|AC008682.6| Homo sapiens chromosome 5 clone CTB-54G2, complet... 42 2.5
34gb|AC026800.4|AC026800 Homo sapiens chromosome 5 clone CTD-2377N... 42 2.5
35ref|XM_624213.1| PREDICTED: Apis mellifera similar to ENSANGP000... 42 2.5
36dbj|AB058676.1| Homo sapiens mRNA for MEGF10 protein (KIAA1780),... 42 2.5 
>ref|NM_193697.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1080

 Score =  549 bits (277), Expect = e-153
 Identities = 496/569 (87%)
 Strand = Plus / Minus

                                                                        
Query: 162  ccagttagcctgaccatccacgcaccacccaagtacagaccaagcagtggacccgccaag 221
            ||||||||| |||||||||| ||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 1073 ccagttagcttgaccatccaagcaccacccaagtacaggccaagcagcggaccagccaag 1014

                                                                        
Query: 222  agcatctgagtcaagggatcagtcgagggcgtaagcacagccgcagcaaccaccgcgcca 281
            |||||||||||||| ||||| ||||| || ||||||||||| |||||||| || ||||||
Sbjct: 1013 agcatctgagtcaacggatctgtcgacggtgtaagcacagcagcagcaactacagcgcca 954

                                                                        
Query: 282  acaacaacatacctccagattgagagcatttgttcactggaaacaattccaacttgcccc 341
            ||||||||||| |||||||| || |||||||| ||||| ||||| |  || |||||||||
Sbjct: 953  acaacaacatatctccagatggaaagcatttggtcactagaaaccaaaccgacttgcccc 894

                                                                        
Query: 342  agcaacagctggatcacaggcacctgaaaagataaccctgtgctgaacagaagcacaagt 401
            ||||  |||||||| ||||| |||||||||||||| ||||||||||| | ||||||||| 
Sbjct: 893  agcagtagctggataacagggacctgaaaagataatcctgtgctgaataaaagcacaagc 834

                                                                        
Query: 402  acgaactcaaagtactggtctattgaccatatcgattccaccgctccctcggcataattc 461
            || |||||||| ||||| || || ||||||| ||||||||| || || || || || |||
Sbjct: 833  acaaactcaaaatactgatcaatcgaccataacgattccactgccccatctgcgtagttc 774

                                                                        
Query: 462  acgaaaaagttcaatgccgctggagcaagaatagtgtaggagaataaaatgccaaggtag 521
            ||||| || |||||||| || ||||||||||  ||||||||||| |||||||||||||||
Sbjct: 773  acgaagaaattcaatgctgcaggagcaagaaccgtgtaggagaagaaaatgccaaggtag 714

                                                                        
Query: 522  aacagaactgaagaacccaaaacaatgggccctaggaatttccgctcatccttggttaaa 581
            || || || ||||| |||| ||||||||||||||||||||| || |||||| | ||||||
Sbjct: 713  aatagtacagaagagcccagaacaatgggccctaggaatttacgttcatcccttgttaaa 654

                                                                        
Query: 582  ccagggagaacaaatgctatgatctcatacaaaattacaggacttccgattaggaggcca 641
            || || |||||||||||||| |||||||||| ||| |||||||| || | ||| ||||||
Sbjct: 653  cccggaagaacaaatgctattatctcatacagaataacaggactcccaagtagaaggcca 594

                                                                        
Query: 642  caataaccagaaaccttcaatgttgtaaagaaaaattctccaggggagagctgcaaaaat 701
            ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| 
Sbjct: 593  caataaccagagaccttcaatgttgtaaagaaaaattctccaggagagagctgcagaaac 534

                                         
Query: 702  cggacaccctgaacactaacaggcgcttc 730
            || ||||||||||||||||| || |||||
Sbjct: 533  cgaacaccctgaacactaactggtgcttc 505
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>dbj|AK067297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104L23, full
            insert sequence
          Length = 1401

 Score =  549 bits (277), Expect = e-153
 Identities = 496/569 (87%)
 Strand = Plus / Minus

                                                                        
Query: 162  ccagttagcctgaccatccacgcaccacccaagtacagaccaagcagtggacccgccaag 221
            ||||||||| |||||||||| ||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 1282 ccagttagcttgaccatccaagcaccacccaagtacaggccaagcagcggaccagccaag 1223

                                                                        
Query: 222  agcatctgagtcaagggatcagtcgagggcgtaagcacagccgcagcaaccaccgcgcca 281
            |||||||||||||| ||||| ||||| || ||||||||||| |||||||| || ||||||
Sbjct: 1222 agcatctgagtcaacggatctgtcgacggtgtaagcacagcagcagcaactacagcgcca 1163

                                                                        
Query: 282  acaacaacatacctccagattgagagcatttgttcactggaaacaattccaacttgcccc 341
            ||||||||||| |||||||| || |||||||| ||||| ||||| |  || |||||||||
Sbjct: 1162 acaacaacatatctccagatggaaagcatttggtcactagaaaccaaaccgacttgcccc 1103

                                                                        
Query: 342  agcaacagctggatcacaggcacctgaaaagataaccctgtgctgaacagaagcacaagt 401
            ||||  |||||||| ||||| |||||||||||||| ||||||||||| | ||||||||| 
Sbjct: 1102 agcagtagctggataacagggacctgaaaagataatcctgtgctgaataaaagcacaagc 1043

                                                                        
Query: 402  acgaactcaaagtactggtctattgaccatatcgattccaccgctccctcggcataattc 461
            || |||||||| ||||| || || ||||||| ||||||||| || || || || || |||
Sbjct: 1042 acaaactcaaaatactgatcaatcgaccataacgattccactgccccatctgcgtagttc 983

                                                                        
Query: 462  acgaaaaagttcaatgccgctggagcaagaatagtgtaggagaataaaatgccaaggtag 521
            ||||| || |||||||| || ||||||||||  ||||||||||| |||||||||||||||
Sbjct: 982  acgaagaaattcaatgctgcaggagcaagaaccgtgtaggagaagaaaatgccaaggtag 923

                                                                        
Query: 522  aacagaactgaagaacccaaaacaatgggccctaggaatttccgctcatccttggttaaa 581
            || || || ||||| |||| ||||||||||||||||||||| || |||||| | ||||||
Sbjct: 922  aatagtacagaagagcccagaacaatgggccctaggaatttacgttcatcccttgttaaa 863

                                                                        
Query: 582  ccagggagaacaaatgctatgatctcatacaaaattacaggacttccgattaggaggcca 641
            || || |||||||||||||| |||||||||| ||| |||||||| || | ||| ||||||
Sbjct: 862  cccggaagaacaaatgctattatctcatacagaataacaggactcccaagtagaaggcca 803

                                                                        
Query: 642  caataaccagaaaccttcaatgttgtaaagaaaaattctccaggggagagctgcaaaaat 701
            ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| 
Sbjct: 802  caataaccagagaccttcaatgttgtaaagaaaaattctccaggagagagctgcagaaac 743

                                         
Query: 702  cggacaccctgaacactaacaggcgcttc 730
            || ||||||||||||||||| || |||||
Sbjct: 742  cgaacaccctgaacactaactggtgcttc 714
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>dbj|AB050885.1| Oryza sativa (japonica cultivar-group) OsTATC mRNA, complete cds
          Length = 1781

 Score =  549 bits (277), Expect = e-153
 Identities = 496/569 (87%)
 Strand = Plus / Minus

                                                                        
Query: 162  ccagttagcctgaccatccacgcaccacccaagtacagaccaagcagtggacccgccaag 221
            ||||||||| |||||||||| ||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 1612 ccagttagcttgaccatccaagcaccacccaagtacaggccaagcagcggaccagccaag 1553

                                                                        
Query: 222  agcatctgagtcaagggatcagtcgagggcgtaagcacagccgcagcaaccaccgcgcca 281
            |||||||||||||| ||||| ||||| || ||||||||||| |||||||| || ||||||
Sbjct: 1552 agcatctgagtcaacggatctgtcgacggtgtaagcacagcagcagcaactacagcgcca 1493

                                                                        
Query: 282  acaacaacatacctccagattgagagcatttgttcactggaaacaattccaacttgcccc 341
            ||||||||||| |||||||| || |||||||| ||||| ||||| |  || |||||||||
Sbjct: 1492 acaacaacatatctccagatggaaagcatttggtcactagaaaccaaaccgacttgcccc 1433

                                                                        
Query: 342  agcaacagctggatcacaggcacctgaaaagataaccctgtgctgaacagaagcacaagt 401
            ||||  |||||||| ||||| |||||||||||||| ||||||||||| | ||||||||| 
Sbjct: 1432 agcagtagctggataacagggacctgaaaagataatcctgtgctgaataaaagcacaagc 1373

                                                                        
Query: 402  acgaactcaaagtactggtctattgaccatatcgattccaccgctccctcggcataattc 461
            || |||||||| ||||| || || ||||||| ||||||||| || || || || || |||
Sbjct: 1372 acaaactcaaaatactgatcaatcgaccataacgattccactgccccatctgcgtagttc 1313

                                                                        
Query: 462  acgaaaaagttcaatgccgctggagcaagaatagtgtaggagaataaaatgccaaggtag 521
            ||||| || |||||||| || ||||||||||  ||||||||||| |||||||||||||||
Sbjct: 1312 acgaagaaattcaatgctgcaggagcaagaaccgtgtaggagaagaaaatgccaaggtag 1253

                                                                        
Query: 522  aacagaactgaagaacccaaaacaatgggccctaggaatttccgctcatccttggttaaa 581
            || || || ||||| |||| ||||||||||||||||||||| || |||||| | ||||||
Sbjct: 1252 aatagtacagaagagcccagaacaatgggccctaggaatttacgttcatcccttgttaaa 1193

                                                                        
Query: 582  ccagggagaacaaatgctatgatctcatacaaaattacaggacttccgattaggaggcca 641
            || || |||||||||||||| |||||||||| ||| |||||||| || | ||| ||||||
Sbjct: 1192 cccggaagaacaaatgctattatctcatacagaataacaggactcccaagtagaaggcca 1133

                                                                        
Query: 642  caataaccagaaaccttcaatgttgtaaagaaaaattctccaggggagagctgcaaaaat 701
            ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| 
Sbjct: 1132 caataaccagagaccttcaatgttgtaaagaaaaattctccaggagagagctgcagaaac 1073

                                         
Query: 702  cggacaccctgaacactaacaggcgcttc 730
            || ||||||||||||||||| || |||||
Sbjct: 1072 cgaacaccctgaacactaactggtgcttc 1044
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  252 bits (127), Expect = 1e-63
 Identities = 253/295 (85%)
 Strand = Plus / Plus

                                                                            
Query: 363      acctgaaaagataaccctgtgctgaacagaagcacaagtacgaactcaaagtactggtct 422
                |||||||||||||| ||||||||||| | ||||||||| || |||||||| ||||| || 
Sbjct: 17338405 acctgaaaagataatcctgtgctgaataaaagcacaagcacaaactcaaaatactgatca 17338464

                                                                            
Query: 423      attgaccatatcgattccaccgctccctcggcataattcacgaaaaagttcaatgccgct 482
                || ||||||| ||||||||| || || || || || |||||||| || |||||||| || 
Sbjct: 17338465 atcgaccataacgattccactgccccatctgcgtagttcacgaagaaattcaatgctgca 17338524

                                                                            
Query: 483      ggagcaagaatagtgtaggagaataaaatgccaaggtagaacagaactgaagaacccaaa 542
                ||||||||||  ||||||||||| ||||||||||||||||| || || ||||| |||| |
Sbjct: 17338525 ggagcaagaaccgtgtaggagaagaaaatgccaaggtagaatagtacagaagagcccaga 17338584

                                                                            
Query: 543      acaatgggccctaggaatttccgctcatccttggttaaaccagggagaacaaatgctatg 602
                |||||||||||||||||||| || |||||| | |||||||| || |||||||||||||| 
Sbjct: 17338585 acaatgggccctaggaatttacgttcatcccttgttaaacccggaagaacaaatgctatt 17338644

                                                                       
Query: 603      atctcatacaaaattacaggacttccgattaggaggccacaataaccagaaacct 657
                |||||||||| ||| |||||||| || | ||| ||||||||||||||||| ||||
Sbjct: 17338645 atctcatacagaataacaggactcccaagtagaaggccacaataaccagagacct 17338699



 Score =  210 bits (106), Expect = 5e-51
 Identities = 181/206 (87%)
 Strand = Plus / Plus

                                                                            
Query: 162      ccagttagcctgaccatccacgcaccacccaagtacagaccaagcagtggacccgccaag 221
                ||||||||| |||||||||| ||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 17337462 ccagttagcttgaccatccaagcaccacccaagtacaggccaagcagcggaccagccaag 17337521

                                                                            
Query: 222      agcatctgagtcaagggatcagtcgagggcgtaagcacagccgcagcaaccaccgcgcca 281
                |||||||||||||| ||||| ||||| || ||||||||||| |||||||| || ||||||
Sbjct: 17337522 agcatctgagtcaacggatctgtcgacggtgtaagcacagcagcagcaactacagcgcca 17337581

                                                                            
Query: 282      acaacaacatacctccagattgagagcatttgttcactggaaacaattccaacttgcccc 341
                ||||||||||| |||||||| || |||||||| ||||| ||||| |  || |||||||||
Sbjct: 17337582 acaacaacatatctccagatggaaagcatttggtcactagaaaccaaaccgacttgcccc 17337641

                                          
Query: 342      agcaacagctggatcacaggcacctg 367
                ||||  |||||||| ||||| |||||
Sbjct: 17337642 agcagtagctggataacagggacctg 17337667



 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                            
Query: 654      accttcaatgttgtaaagaaaaattctccaggggagagctgcaaaaatcggacaccctga 713
                |||||||||||||||||||||||||||||||| |||||||||| ||| || |||||||||
Sbjct: 17339924 accttcaatgttgtaaagaaaaattctccaggagagagctgcagaaaccgaacaccctga 17339983

                                 
Query: 714      acactaacaggcgcttc 730
                |||||||| || |||||
Sbjct: 17339984 acactaactggtgcttc 17340000
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>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1080D07
          Length = 173856

 Score =  252 bits (127), Expect = 1e-63
 Identities = 253/295 (85%)
 Strand = Plus / Plus

                                                                          
Query: 363    acctgaaaagataaccctgtgctgaacagaagcacaagtacgaactcaaagtactggtct 422
              |||||||||||||| ||||||||||| | ||||||||| || |||||||| ||||| || 
Sbjct: 104666 acctgaaaagataatcctgtgctgaataaaagcacaagcacaaactcaaaatactgatca 104725

                                                                          
Query: 423    attgaccatatcgattccaccgctccctcggcataattcacgaaaaagttcaatgccgct 482
              || ||||||| ||||||||| || || || || || |||||||| || |||||||| || 
Sbjct: 104726 atcgaccataacgattccactgccccatctgcgtagttcacgaagaaattcaatgctgca 104785

                                                                          
Query: 483    ggagcaagaatagtgtaggagaataaaatgccaaggtagaacagaactgaagaacccaaa 542
              ||||||||||  ||||||||||| ||||||||||||||||| || || ||||| |||| |
Sbjct: 104786 ggagcaagaaccgtgtaggagaagaaaatgccaaggtagaatagtacagaagagcccaga 104845

                                                                          
Query: 543    acaatgggccctaggaatttccgctcatccttggttaaaccagggagaacaaatgctatg 602
              |||||||||||||||||||| || |||||| | |||||||| || |||||||||||||| 
Sbjct: 104846 acaatgggccctaggaatttacgttcatcccttgttaaacccggaagaacaaatgctatt 104905

                                                                     
Query: 603    atctcatacaaaattacaggacttccgattaggaggccacaataaccagaaacct 657
              |||||||||| ||| |||||||| || | ||| ||||||||||||||||| ||||
Sbjct: 104906 atctcatacagaataacaggactcccaagtagaaggccacaataaccagagacct 104960



 Score =  210 bits (106), Expect = 5e-51
 Identities = 181/206 (87%)
 Strand = Plus / Plus

                                                                          
Query: 162    ccagttagcctgaccatccacgcaccacccaagtacagaccaagcagtggacccgccaag 221
              ||||||||| |||||||||| ||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 103723 ccagttagcttgaccatccaagcaccacccaagtacaggccaagcagcggaccagccaag 103782

                                                                          
Query: 222    agcatctgagtcaagggatcagtcgagggcgtaagcacagccgcagcaaccaccgcgcca 281
              |||||||||||||| ||||| ||||| || ||||||||||| |||||||| || ||||||
Sbjct: 103783 agcatctgagtcaacggatctgtcgacggtgtaagcacagcagcagcaactacagcgcca 103842

                                                                          
Query: 282    acaacaacatacctccagattgagagcatttgttcactggaaacaattccaacttgcccc 341
              ||||||||||| |||||||| || |||||||| ||||| ||||| |  || |||||||||
Sbjct: 103843 acaacaacatatctccagatggaaagcatttggtcactagaaaccaaaccgacttgcccc 103902

                                        
Query: 342    agcaacagctggatcacaggcacctg 367
              ||||  |||||||| ||||| |||||
Sbjct: 103903 agcagtagctggataacagggacctg 103928



 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                          
Query: 654    accttcaatgttgtaaagaaaaattctccaggggagagctgcaaaaatcggacaccctga 713
              |||||||||||||||||||||||||||||||| |||||||||| ||| || |||||||||
Sbjct: 106185 accttcaatgttgtaaagaaaaattctccaggagagagctgcagaaaccgaacaccctga 106244

                               
Query: 714    acactaacaggcgcttc 730
              |||||||| || |||||
Sbjct: 106245 acactaactggtgcttc 106261
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>ref|NM_126173.3| Arabidopsis thaliana APG2 (ALBINO AND PALE GREEN 2) AT2G01110
           (APG2) mRNA, complete cds
          Length = 1690

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtctattgacca 430
           ||||||||||||| |||||| ||||| ||||||||||||||||| || |||||
Sbjct: 941 cctgtgctgaacataagcactagtacaaactcaaagtactggtcgatagacca 889
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>gb|AY056347.1| Arabidopsis thaliana putative TATC protein (At2g01110) mRNA,
           complete cds
          Length = 1053

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtctattgacca 430
           ||||||||||||| |||||| ||||| ||||||||||||||||| || |||||
Sbjct: 800 cctgtgctgaacataagcactagtacaaactcaaagtactggtcgatagacca 748
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>gb|AF360172.1| Arabidopsis thaliana putative TATC protein (At2g01110) mRNA,
           complete cds
          Length = 1277

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtctattgacca 430
           ||||||||||||| |||||| ||||| ||||||||||||||||| || |||||
Sbjct: 820 cctgtgctgaacataagcactagtacaaactcaaagtactggtcgatagacca 768
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>gb|AC006837.16| Arabidopsis thaliana chromosome 2 BAC F23H14 genomic sequence, complete
             sequence
          Length = 91268

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 378   cctgtgctgaacagaagcacaagtacgaactcaaagtactggtctattgacca 430
             ||||||||||||| |||||| ||||| ||||||||||||||||| || |||||
Sbjct: 83098 cctgtgctgaacataagcactagtacaaactcaaagtactggtcgatagacca 83150



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 172   tgaccatccacgcaccacccaagta 196
             |||||||||| ||||||||||||||
Sbjct: 82803 tgaccatccatgcaccacccaagta 82827
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>emb|BX820614.1|CNS0A9P2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH52ZF05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1254

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtctattgacca 430
           ||||||||||||| |||||| ||||| ||||||||||||||||| || |||||
Sbjct: 894 cctgtgctgaacataagcactagtacaaactcaaagtactggtcgatagacca 842
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>emb|BX821288.1|CNS0A98C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL32ZA12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1164

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtctattgacca 430
           ||||||||||||| |||||| ||||| ||||||||||||||||| || |||||
Sbjct: 864 cctgtgctgaacataagcactagtacaaactcaaagtactggtcgatagacca 812



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 172  tgaccatccacgcaccacccaagta 196
            |||||||||| ||||||||||||||
Sbjct: 1070 tgaccatccatgcaccacccaagta 1046
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>gb|AY084784.1| Arabidopsis thaliana clone 117779 mRNA, complete sequence
          Length = 1279

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtctattgacca 430
           ||||||||||||| |||||| ||||| ||||||||||||||||| || |||||
Sbjct: 941 cctgtgctgaacataagcactagtacaaactcaaagtactggtcgatagacca 889
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>dbj|AB054096.1| Arabidopsis thaliana apg2 mRNA for cpTatC, complete cds
          Length = 1023

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtctattgacca 430
           ||||||||||||| |||||| ||||| ||||||||||||||||| || |||||
Sbjct: 800 cctgtgctgaacataagcactagtacaaactcaaagtactggtcgatagacca 748
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>gb|AF145045.1|AF145045 Arabidopsis thaliana TATC mRNA, complete cds
          Length = 1023

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtctattgacca 430
           ||||||||||||| |||||| ||||| ||||||||||||||||| || |||||
Sbjct: 800 cctgtgctgaacataagcactagtacaaactcaaagtactggtcgatagacca 748
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>emb|BX819534.1|CNS0A9W3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB87ZF12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1284

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtc 421
           ||||||||||||| |||||| ||||| |||||||||||||||||
Sbjct: 908 cctgtgctgaacataagcactagtacaaactcaaagtactggtc 865



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 172  tgaccatccacgcaccacccaagta 196
            |||||||||| ||||||||||||||
Sbjct: 1115 tgaccatccatgcaccacccaagta 1091
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>emb|BX819468.1|CNS0A9WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB80ZB04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1173

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtc 421
           ||||||||||||| |||||| ||||| |||||||||||||||||
Sbjct: 862 cctgtgctgaacataagcactagtacaaactcaaagtactggtc 819
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>emb|BX819191.1|CNS0A9X4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB55ZC02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1317

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtc 421
           ||||||||||||| |||||| ||||| |||||||||||||||||
Sbjct: 910 cctgtgctgaacataagcactagtacaaactcaaagtactggtc 867



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 172  tgaccatccacgcaccacccaagta 196
            |||||||||| ||||||||||||||
Sbjct: 1116 tgaccatccatgcaccacccaagta 1092
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>emb|BX820908.1|CNS0A9P4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH80ZD02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1254

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtc 421
           ||||||||||||| |||||| ||||| |||||||||||||||||
Sbjct: 874 cctgtgctgaacataagcactagtacaaactcaaagtactggtc 831
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>emb|BX821977.1|CNS0AAB7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL89ZF12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 645

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtctattgacca 430
           ||||||||||||| ||| || ||||| ||||||||||||||||| || |||||
Sbjct: 189 cctgtgctgaacataaggactagtacaaactcaaagtactggtcgatagacca 137
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>emb|BX821937.1|CNS0A966 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL86ZB11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1298

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 378 cctgtgctgaacagaagcacaagtacgaactcaaagtactggtc 421
           ||||| ||||||| |||||| ||||| |||||||||||||||||
Sbjct: 920 cctgttctgaacataagcactagtacaaactcaaagtactggtc 877



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 172  tgaccatccacgcaccacccaagta 196
            |||||||||| ||||||||||||||
Sbjct: 1127 tgaccatccatgcaccacccaagta 1103
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>gb|AF284759.1|AF284759 Pisum sativum TatC (tatC) mRNA, complete cds; nuclear gene for
            chloroplast product
          Length = 1352

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 99/123 (80%)
 Strand = Plus / Minus

                                                                        
Query: 359  aggcacctgaaaagataaccctgtgctgaacagaagcacaagtacgaactcaaagtactg 418
            ||||||||| ||||| || ||||||||||||| ||| || || || ||||||||||| ||
Sbjct: 1005 aggcacctggaaagacaagcctgtgctgaacataagaaccagaacaaactcaaagtattg 946

                                                                        
Query: 419  gtctattgaccatatcgattccaccgctccctcggcataattcacgaaaaagttcaatgc 478
             || || |||||||  ||||| || || || ||||| ||||| || || || || |||||
Sbjct: 945  atcaatggaccataatgattcaacagcgccttcggcgtaattgacaaagaaatttaatgc 886

               
Query: 479  cgc 481
            |||
Sbjct: 885  cgc 883



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 633 aggaggccacaataaccagaaaccttcaatgttgtaaagaaaaattctccaggggagagc 692
           ||||||||||| || ||||| ||||| || || || ||||||||||| ||||| |  |||
Sbjct: 731 aggaggccacagtatccagacacctttaaagtggtgaagaaaaattcaccaggagcaagc 672

                            
Query: 693 tgcaaaaatcggacacc 709
           || | ||||||||||||
Sbjct: 671 tgaagaaatcggacacc 655



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 172  tgaccatccacgcaccacccaagta 196
            |||||||||| ||||||||||||||
Sbjct: 1192 tgaccatccatgcaccacccaagta 1168
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>ref|XM_467642.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2067

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 255 agcacagccgcagcaaccaccgc 277
           |||||||||||||||||||||||
Sbjct: 270 agcacagccgcagcaaccaccgc 248
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>ref|XM_506957.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643A10.32 mRNA
          Length = 2072

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 255 agcacagccgcagcaaccaccgc 277
           |||||||||||||||||||||||
Sbjct: 276 agcacagccgcagcaaccaccgc 254
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 255      agcacagccgcagcaaccaccgc 277
                |||||||||||||||||||||||
Sbjct: 30592221 agcacagccgcagcaaccaccgc 30592199
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>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0643A10
          Length = 187931

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 255    agcacagccgcagcaaccaccgc 277
              |||||||||||||||||||||||
Sbjct: 104229 agcacagccgcagcaaccaccgc 104207
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>dbj|AK105446.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B05, full
           insert sequence
          Length = 2067

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 255 agcacagccgcagcaaccaccgc 277
           |||||||||||||||||||||||
Sbjct: 270 agcacagccgcagcaaccaccgc 248
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>dbj|AK101108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025E01, full
           insert sequence
          Length = 2072

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 255 agcacagccgcagcaaccaccgc 277
           |||||||||||||||||||||||
Sbjct: 276 agcacagccgcagcaaccaccgc 254
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>gb|AC150388.2| Branchiostoma floridae clone CH302-106N18, complete sequence
          Length = 148532

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 95     gctatggtttctagtagtacactaacacagaat 127
              |||||||||||| || ||||||| |||||||||
Sbjct: 106863 gctatggtttctcgttgtacactcacacagaat 106831
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>ref|NM_032446.1| Homo sapiens multiple EGF-like-domains 10 (MEGF10), mRNA
          Length = 7522

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 571  ccttggttaaaccagggagaa 591
            |||||||||||||||||||||
Sbjct: 5042 ccttggttaaaccagggagaa 5062
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>gb|AF411806.1| Lycopersicon esculentum BAC clone Clemson_Id 2O7, partial sequence
          Length = 61382

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 266  agcaaccaccgcgccaacaacaaca 290
            |||||| ||||||||||||||||||
Sbjct: 1599 agcaacaaccgcgccaacaacaaca 1575
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>emb|CR749437.1| Homo sapiens mRNA; cDNA DKFZp781K1852 (from clone DKFZp781K1852)
          Length = 7582

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 571  ccttggttaaaccagggagaa 591
            |||||||||||||||||||||
Sbjct: 5084 ccttggttaaaccagggagaa 5104
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>gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, complete sequence
          Length = 192282

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 571   ccttggttaaaccagggagaa 591
             |||||||||||||||||||||
Sbjct: 27652 ccttggttaaaccagggagaa 27672
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>gb|AC008682.6| Homo sapiens chromosome 5 clone CTB-54G2, complete sequence
          Length = 217221

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 571   ccttggttaaaccagggagaa 591
             |||||||||||||||||||||
Sbjct: 43017 ccttggttaaaccagggagaa 42997
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>gb|AC026800.4|AC026800 Homo sapiens chromosome 5 clone CTD-2377N4, complete sequence
          Length = 146206

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 571   ccttggttaaaccagggagaa 591
             |||||||||||||||||||||
Sbjct: 34171 ccttggttaaaccagggagaa 34151
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>ref|XM_624213.1| PREDICTED: Apis mellifera similar to ENSANGP00000015084 (LOC551828),
            mRNA
          Length = 3222

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 66   tgaccactcggaccaatcacc 86
            |||||||||||||||||||||
Sbjct: 1764 tgaccactcggaccaatcacc 1744
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>dbj|AB058676.1| Homo sapiens mRNA for MEGF10 protein (KIAA1780), complete cds
          Length = 7522

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 571  ccttggttaaaccagggagaa 591
            |||||||||||||||||||||
Sbjct: 5042 ccttggttaaaccagggagaa 5062


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,824,957
Number of Sequences: 3902068
Number of extensions: 6824957
Number of successful extensions: 109215
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109050
Number of HSP's gapped (non-prelim): 165
length of query: 730
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 707
effective length of database: 17,143,297,704
effective search space: 12120311476728
effective search space used: 12120311476728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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