ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2i09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK067156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 7e-25
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
3dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
4ref|XM_808060.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 2.0
5gb|AC122385.2| Mus musculus BAC clone RP24-72B22 from chromosome... 42 2.0
6emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 42 2.0
7gb|AC154607.2| Mus musculus BAC clone RP23-331D17 from chromosom... 42 2.0
8gb|AC106794.3| Homo sapiens chromosome 5 clone RP11-419C19, comp... 42 2.0
9gb|AC134845.5| Mus musculus BAC clone RP24-424K5 from chromosome... 42 2.0
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
12dbj|AP002820.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
13gb|AC109459.3| Homo sapiens chromosome 5 clone RP11-260E4, compl... 42 2.0
14dbj|AP005526.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
15dbj|AP005506.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
16gb|AC004960.1|AC004960 Homo sapiens PAC clone RP5-1098B1 from 7q... 42 2.0
17emb|CR812484.8| Zebrafish DNA sequence from clone DKEY-83B16 in ... 42 2.0
18dbj|AP006648.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 2.0
19ref|NM_117373.3| Arabidopsis thaliana DNA binding / transcriptio... 40 8.0
20gb|AC124993.19| Mus musculus chromosome 15, clone RP23-150J21, c... 40 8.0
21gb|AY601813.1| Plutella xylostella insecticidal Bt toxin recepto... 40 8.0
22ref|NM_001030055.1| Homo sapiens Rho GTPase activating protein 5... 40 8.0
23ref|NM_001173.2| Homo sapiens Rho GTPase activating protein 5 (A... 40 8.0
24gb|AY573579.1| Plutella xylostella aminopeptidase N2 mRNA, compl... 40 8.0
25gb|AY564236.1| Plutella xylostella aminopeptidase N2 mRNA, compl... 40 8.0
26gb|AC133504.2| Mus musculus BAC clone RP24-174N6 from chromosome... 40 8.0
27emb|AL110484.2|CEY38E10A Caenorhabditis elegans YAC Y38E10A, com... 40 8.0
28gb|AY462277.1| Neisseria mucosa subsp. heidelbergiensis NheI res... 40 8.0
29gb|AC006971.2| Homo sapiens PAC clone RP4-791C19 from 7, complet... 40 8.0
30gb|AC165165.3| Mus musculus BAC clone RP23-121B15 from chromosom... 40 8.0
31emb|AL590005.6| Human DNA sequence from clone RP11-513F12 on chr... 40 8.0
32emb|AL359771.27| Human DNA sequence from clone CTA-520D8 on chro... 40 8.0
33gb|AY133690.1| Arabidopsis thaliana clone C103146 unknown protei... 40 8.0
34gb|BC075799.1| Homo sapiens Rho GTPase activating protein 5, mRN... 40 8.0
35emb|BX538219.1|HSM806451 Homo sapiens genomic DNA; cDNA DKFZp686... 40 8.0
36emb|CR596496.1| full-length cDNA clone CS0DC005YF13 of Neuroblas... 40 8.0
37dbj|AK023468.1| Homo sapiens cDNA FLJ13406 fis, clone PLACE1001634 40 8.0
38dbj|AK023014.1| Homo sapiens cDNA FLJ12952 fis, clone NT2RP20054... 40 8.0
39gb|AC024918.5| Homo sapiens chromosome 17, clone RP11-254J21, co... 40 8.0
40dbj|AK221624.1| Arabidopsis thaliana mRNA for hypothetical prote... 40 8.0
41dbj|AK035333.1| Mus musculus adult male urinary bladder cDNA, RI... 40 8.0
42gb|AC010350.5|AC010350 Homo sapiens chromosome 5 clone CTD-2020P... 40 8.0
43gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Can... 40 8.0
44emb|BX828994.1|CNS0A2ML Arabidopsis thaliana Full-length cDNA Co... 40 8.0
45emb|AL161665.5|CNS01RH9 Human chromosome 14 DNA sequence BAC R-4... 40 8.0
46emb|AL844849.13| Mouse DNA sequence from clone RP23-383L13 on ch... 40 8.0
47dbj|AP004534.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 8.0
48emb|AL928930.9| Mouse DNA sequence from clone RP23-386P7 on chro... 40 8.0
49gb|AC169805.2| Rhesus Macaque CHR14 BAC CH250-14P20 (Children's ... 40 8.0
50emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chro... 40 8.0
51emb|AJ222699.1|PXY222699 Plutella xylostella mRNA for aminopepti... 40 8.0

>dbj|AK067156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098A10, full
            insert sequence
          Length = 2697

 Score =  123 bits (62), Expect = 7e-25
 Identities = 131/154 (85%)
 Strand = Plus / Minus

                                                                        
Query: 437  ccaacctttctttgttttttgctggttatggtgttgcgtgtcattgccaggaaatcgtcc 496
            ||||| || |||||||||||||||||||||||||  || |||||  ||| ||| || | |
Sbjct: 2248 ccaactttcctttgttttttgctggttatggtgtctcgagtcatatccaagaagtccttc 2189

                                                                        
Query: 497  catgtgtacttaaccagttcgtttttctcttcctcagaaagttcaaaattgggctctctt 556
            || ||||| ||    ||||| || ||||||||||||||||||||||| || ||||| |||
Sbjct: 2188 caggtgtaattctgtagttctttcttctcttcctcagaaagttcaaagtttggctccctt 2129

                                              
Query: 557  ccacacataaaagcagccctatcatatagccggg 590
            ||||||||||||||||||||||||||||| ||||
Sbjct: 2128 ccacacataaaagcagccctatcatatagtcggg 2095



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 348  catctccatcatctgagttcgaagacccgccaccattgaccatctcagtatc 399
            |||||||||| || |||| ||| || ||||||||||||| ||||||||||||
Sbjct: 2349 catctccatcttccgagtgcgatgagccgccaccattgatcatctcagtatc 2298



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 44/49 (89%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 200  tttatcagaccaccagggcc-ttatgcacatgaatttaaatactgagag 247
            |||||||||||| ||||||| ||||||||||||| |||| || ||||||
Sbjct: 2510 tttatcagaccatcagggcccttatgcacatgaaattaattattgagag 2462



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                            
Query: 512      agttcgtttttctcttcctcagaaagttcaaaattgggctctcttccacacataaaagca 571
                ||||| || ||||||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 17681352 agttctttcttctcttcctcagaaagttcaaagtttggctcccttccacacataaaagca 17681293

                     
Query: 572      gccct 576
                |||||
Sbjct: 17681292 gccct 17681288



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                    
Query: 348      catctccatcatctgagttcgaagacccgccaccattgaccatctcagtatc 399
                |||||||||| || |||| ||| || ||||||||||||| ||||||||||||
Sbjct: 17681657 catctccatcttccgagtgcgatgagccgccaccattgatcatctcagtatc 17681606



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 44/49 (89%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                                 
Query: 200      tttatcagaccaccagggcc-ttatgcacatgaatttaaatactgagag 247
                |||||||||||| ||||||| ||||||||||||| |||| || ||||||
Sbjct: 17681818 tttatcagaccatcagggcccttatgcacatgaaattaattattgagag 17681770



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>dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0021C10
          Length = 119527

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                         
Query: 512   agttcgtttttctcttcctcagaaagttcaaaattgggctctcttccacacataaaagca 571
             ||||| || ||||||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 37366 agttctttcttctcttcctcagaaagttcaaagtttggctcccttccacacataaaagca 37307

                  
Query: 572   gccct 576
             |||||
Sbjct: 37306 gccct 37302



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                 
Query: 348   catctccatcatctgagttcgaagacccgccaccattgaccatctcagtatc 399
             |||||||||| || |||| ||| || ||||||||||||| ||||||||||||
Sbjct: 37671 catctccatcttccgagtgcgatgagccgccaccattgatcatctcagtatc 37620



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 44/49 (89%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                              
Query: 200   tttatcagaccaccagggcc-ttatgcacatgaatttaaatactgagag 247
             |||||||||||| ||||||| ||||||||||||| |||| || ||||||
Sbjct: 37832 tttatcagaccatcagggcccttatgcacatgaaattaattattgagag 37784



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>ref|XM_808060.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508723.70) partial mRNA
          Length = 6603

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 485 aggaaatcgtcccatgtgtac 505
           |||||||||||||||||||||
Sbjct: 458 aggaaatcgtcccatgtgtac 438



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>gb|AC122385.2| Mus musculus BAC clone RP24-72B22 from chromosome 1, complete sequence
          Length = 178821

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 443    tttctttgttttttgctggtt 463
              |||||||||||||||||||||
Sbjct: 134861 tttctttgttttttgctggtt 134881



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>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 442    ctttctttgttttttgctggt 462
              |||||||||||||||||||||
Sbjct: 262598 ctttctttgttttttgctggt 262578



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>gb|AC154607.2| Mus musculus BAC clone RP23-331D17 from chromosome 16, complete
             sequence
          Length = 202496

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 104   gctaaattcatttctataatt 124
             |||||||||||||||||||||
Sbjct: 84834 gctaaattcatttctataatt 84814



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>gb|AC106794.3| Homo sapiens chromosome 5 clone RP11-419C19, complete sequence
          Length = 200581

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 106   taaattcatttctataattga 126
             |||||||||||||||||||||
Sbjct: 23324 taaattcatttctataattga 23304



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>gb|AC134845.5| Mus musculus BAC clone RP24-424K5 from chromosome 1, complete
           sequence
          Length = 194449

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 443 tttctttgttttttgctggtt 463
           |||||||||||||||||||||
Sbjct: 392 tttctttgttttttgctggtt 412



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 159     ccatctccaatttgaactgag 179
               |||||||||||||||||||||
Sbjct: 2546080 ccatctccaatttgaactgag 2546100



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 3        aaaatattctataggtaaaacttgt 27
                |||||||| ||||||||||||||||
Sbjct: 10720517 aaaatattttataggtaaaacttgt 10720493



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>dbj|AP002820.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0702D12
          Length = 137332

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 3     aaaatattctataggtaaaacttgt 27
             |||||||| ||||||||||||||||
Sbjct: 43331 aaaatattttataggtaaaacttgt 43307



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>gb|AC109459.3| Homo sapiens chromosome 5 clone RP11-260E4, complete sequence
          Length = 137309

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 106   taaattcatttctataattga 126
             |||||||||||||||||||||
Sbjct: 85795 taaattcatttctataattga 85775



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>dbj|AP005526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0571B09
          Length = 147382

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 159   ccatctccaatttgaactgag 179
             |||||||||||||||||||||
Sbjct: 60437 ccatctccaatttgaactgag 60457



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>dbj|AP005506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0665F09
          Length = 147102

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 159    ccatctccaatttgaactgag 179
              |||||||||||||||||||||
Sbjct: 107709 ccatctccaatttgaactgag 107729



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>gb|AC004960.1|AC004960 Homo sapiens PAC clone RP5-1098B1 from 7q11.23-q21, complete sequence
          Length = 143834

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 49     tgtaaacctataaacagatat 69
              |||||||||||||||||||||
Sbjct: 138126 tgtaaacctataaacagatat 138146



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>emb|CR812484.8| Zebrafish DNA sequence from clone DKEY-83B16 in linkage group 18,
              complete sequence
          Length = 149153

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 78     ctggaatcgtttcaaatgatt 98
              |||||||||||||||||||||
Sbjct: 129113 ctggaatcgtttcaaatgatt 129133



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>dbj|AP006648.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29O08, TM0320a,
             complete sequence
          Length = 76227

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 448   ttgttttttgctggttatggtgttg 472
             |||||||||| ||||||||||||||
Sbjct: 16166 ttgttttttgttggttatggtgttg 16142



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>ref|NM_117373.3| Arabidopsis thaliana DNA binding / transcription factor AT4G13040
           mRNA, complete cds
          Length = 861

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 557 ccacacataaaagcagccctatcatata 584
           |||||||| |||||||||||||| ||||
Sbjct: 625 ccacacatgaaagcagccctatcgtata 598



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>gb|AC124993.19| Mus musculus chromosome 15, clone RP23-150J21, complete sequence
          Length = 214304

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   tatgcacatgaatttaaata 240
             ||||||||||||||||||||
Sbjct: 59934 tatgcacatgaatttaaata 59953



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>gb|AY601813.1| Plutella xylostella insecticidal Bt toxin receptor APN2 mRNA,
            complete cds
          Length = 2975

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  ccaccattgaccatctcagt 396
            ||||||||||||||||||||
Sbjct: 2273 ccaccattgaccatctcagt 2254



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>ref|NM_001030055.1| Homo sapiens Rho GTPase activating protein 5 (ARHGAP5), transcript
            variant 1, mRNA
          Length = 9604

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  cttcaatttaatttgttcct 150
            ||||||||||||||||||||
Sbjct: 5790 cttcaatttaatttgttcct 5809



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>ref|NM_001173.2| Homo sapiens Rho GTPase activating protein 5 (ARHGAP5), transcript
            variant 2, mRNA
          Length = 9601

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  cttcaatttaatttgttcct 150
            ||||||||||||||||||||
Sbjct: 5787 cttcaatttaatttgttcct 5806



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>gb|AY573579.1| Plutella xylostella aminopeptidase N2 mRNA, complete cds
          Length = 2965

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  ccaccattgaccatctcagt 396
            ||||||||||||||||||||
Sbjct: 2273 ccaccattgaccatctcagt 2254



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>gb|AY564236.1| Plutella xylostella aminopeptidase N2 mRNA, complete cds
          Length = 2956

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  ccaccattgaccatctcagt 396
            ||||||||||||||||||||
Sbjct: 2273 ccaccattgaccatctcagt 2254



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>gb|AC133504.2| Mus musculus BAC clone RP24-174N6 from chromosome 15, complete sequence
          Length = 145186

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    tatgcacatgaatttaaata 240
              ||||||||||||||||||||
Sbjct: 126416 tatgcacatgaatttaaata 126435



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>emb|AL110484.2|CEY38E10A Caenorhabditis elegans YAC Y38E10A, complete sequence
          Length = 110933

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    ggtaaaacttgtgttaaact 35
             ||||||||||||||||||||
Sbjct: 46712 ggtaaaacttgtgttaaact 46693



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>gb|AY462277.1| Neisseria mucosa subsp. heidelbergiensis NheI
           restriction-modification system, complete sequence
          Length = 3009

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 108 aattcatttctataattgac 127
           ||||||||||||||||||||
Sbjct: 497 aattcatttctataattgac 478



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>gb|AC006971.2| Homo sapiens PAC clone RP4-791C19 from 7, complete sequence
          Length = 115861

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   cttcaatttaatttgttcct 150
             ||||||||||||||||||||
Sbjct: 44915 cttcaatttaatttgttcct 44934



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>gb|AC165165.3| Mus musculus BAC clone RP23-121B15 from chromosome 3, complete sequence
          Length = 228648

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    gaggggggaaaaactagagg 264
              ||||||||||||||||||||
Sbjct: 115142 gaggggggaaaaactagagg 115123



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>emb|AL590005.6| Human DNA sequence from clone RP11-513F12 on chromosome 6 Contains part
             of the BPAG1 gene for bullous pemphigoid antigen 1
             (230/240kD), complete sequence
          Length = 101658

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   catgaatttaaatactgaga 246
             ||||||||||||||||||||
Sbjct: 27644 catgaatttaaatactgaga 27663



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>emb|AL359771.27| Human DNA sequence from clone CTA-520D8 on chromosome 1 Contains the 3'
              end of the gene for lung type-I cell membrane-associated
              glycoprotein (T1A-2), a novel gene, the 5' end of the PRDM2
              gene for PR domain containing 2 with ZNF domain and a CpG
              island, complete sequence
          Length = 111182

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    cttcaatttaatttgttcct 150
              ||||||||||||||||||||
Sbjct: 104513 cttcaatttaatttgttcct 104494



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>gb|AY133690.1| Arabidopsis thaliana clone C103146 unknown protein (At4g13040)
           mRNA, complete cds
          Length = 622

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 557 ccacacataaaagcagccctatcatata 584
           |||||||| |||||||||||||| ||||
Sbjct: 392 ccacacatgaaagcagccctatcgtata 365



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>gb|BC075799.1| Homo sapiens Rho GTPase activating protein 5, mRNA (cDNA clone
            IMAGE:5286523), complete cds
          Length = 2850

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  cttcaatttaatttgttcct 150
            ||||||||||||||||||||
Sbjct: 1972 cttcaatttaatttgttcct 1991



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>emb|BX538219.1|HSM806451 Homo sapiens genomic DNA; cDNA DKFZp686C20130 (from clone
            DKFZp686C20130)
          Length = 4385

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  cttcaatttaatttgttcct 150
            ||||||||||||||||||||
Sbjct: 1564 cttcaatttaatttgttcct 1545



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>emb|CR596496.1| full-length cDNA clone CS0DC005YF13 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 3013

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  cttcaatttaatttgttcct 150
            ||||||||||||||||||||
Sbjct: 1760 cttcaatttaatttgttcct 1779



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>dbj|AK023468.1| Homo sapiens cDNA FLJ13406 fis, clone PLACE1001634
          Length = 2026

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 cttcaatttaatttgttcct 150
           ||||||||||||||||||||
Sbjct: 890 cttcaatttaatttgttcct 909



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>dbj|AK023014.1| Homo sapiens cDNA FLJ12952 fis, clone NT2RP2005476, highly similar to
            Human p190-B (p190-B) mRNA
          Length = 3207

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  cttcaatttaatttgttcct 150
            ||||||||||||||||||||
Sbjct: 1905 cttcaatttaatttgttcct 1924



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>gb|AC024918.5| Homo sapiens chromosome 17, clone RP11-254J21, complete sequence
          Length = 172784

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   tttctcttcctcagaaagtt 539
             ||||||||||||||||||||
Sbjct: 73864 tttctcttcctcagaaagtt 73883



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>dbj|AK221624.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL07-94-D09
          Length = 839

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 557 ccacacataaaagcagccctatcatata 584
           |||||||| |||||||||||||| ||||
Sbjct: 553 ccacacatgaaagcagccctatcgtata 526



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>dbj|AK035333.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530018I21 product:polydomain
            protein, full insert sequence
          Length = 3242

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 348  catctccatcatctgagttc 367
            ||||||||||||||||||||
Sbjct: 2229 catctccatcatctgagttc 2248



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>gb|AC010350.5|AC010350 Homo sapiens chromosome 5 clone CTD-2020P22, complete sequence
          Length = 92725

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   cttcaatttaatttgttcct 150
             ||||||||||||||||||||
Sbjct: 71283 cttcaatttaatttgttcct 71264



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>gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 160039

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 546  tgggctctcttccacacata 565
            ||||||||||||||||||||
Sbjct: 3975 tgggctctcttccacacata 3956



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>emb|BX828994.1|CNS0A2ML Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL58ZF04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 862

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 557 ccacacataaaagcagccctatcatata 584
           |||||||| |||||||||||||| ||||
Sbjct: 625 ccacacatgaaagcagccctatcgtata 598



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>emb|AL161665.5|CNS01RH9 Human chromosome 14 DNA sequence BAC R-431H16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172993

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   cttcaatttaatttgttcct 150
             ||||||||||||||||||||
Sbjct: 66576 cttcaatttaatttgttcct 66557



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>emb|AL844849.13| Mouse DNA sequence from clone RP23-383L13 on chromosome 2, complete
             sequence
          Length = 155501

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    aacagatatgcacagttctg 80
             ||||||||||||||||||||
Sbjct: 80799 aacagatatgcacagttctg 80780



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>dbj|AP004534.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT14P20, TM0087,
             complete sequence
          Length = 124300

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   catcttcaatttaatttgtt 147
             ||||||||||||||||||||
Sbjct: 47543 catcttcaatttaatttgtt 47562



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>emb|AL928930.9| Mouse DNA sequence from clone RP23-386P7 on chromosome 2, complete
             sequence
          Length = 155721

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 42    atgttgatgtaaacctataaacag 65
             ||||||||||||| ||||||||||
Sbjct: 49391 atgttgatgtaaaactataaacag 49414



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>gb|AC169805.2| Rhesus Macaque CHR14 BAC CH250-14P20 (Children's Hospital Oakland
             Research Institute Rhesus macaque Adult Male BAC Library)
             complete sequence
          Length = 204789

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 542   aaattgggctctcttccaca 561
             ||||||||||||||||||||
Sbjct: 10981 aaattgggctctcttccaca 10962



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>emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chromosome 4, complete
             sequence
          Length = 252953

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   catctccatcatctgagttc 367
             ||||||||||||||||||||
Sbjct: 64877 catctccatcatctgagttc 64858



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>emb|AJ222699.1|PXY222699 Plutella xylostella mRNA for aminopeptidase N
          Length = 2963

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  ccaccattgaccatctcagt 396
            ||||||||||||||||||||
Sbjct: 2276 ccaccattgaccatctcagt 2257


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,609,598
Number of Sequences: 3902068
Number of extensions: 6609598
Number of successful extensions: 139703
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139448
Number of HSP's gapped (non-prelim): 252
length of query: 590
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 567
effective length of database: 17,143,297,704
effective search space: 9720249798168
effective search space used: 9720249798168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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