ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags39o04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472312.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1323 Score = 589 bits (297), Expect = e-165 Identities = 450/501 (89%) Strand = Plus / Minus Query: 202 ttatatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaa 261 ||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||| Sbjct: 1323 ttatatgtcgaggagcaatctccgtgggtcttcaaccacgtccttgatgcggcgcaggaa 1264 Query: 262 gtagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 1263 gtagacagcttctctgccgtcgatcagcctgtggtcatatgtcagcgcaaggtacatcat 1204 Query: 322 gggcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatccc 381 ||||| || || ||| |||||||||||||||| ||||| || |||||||||||||| || Sbjct: 1203 tggcctcgcgagaatgttgccgtccacgaccacagggcgttgtacaatggagtgcattcc 1144 Query: 382 aagaatcgctgactgtggggggttgatgatgggcgtgctaataaggcttccgtagacacc 441 |||||| || |||||||||||||||||||| || ||||| |||||||||||||| ||||| Sbjct: 1143 aagaatagcagactgtggggggttgatgataggtgtgctgataaggcttccgtaaacacc 1084 Query: 442 accgttggagatggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagt 501 |||||| |||||||||||||||||||| |||||||| |||||||| || ||||||||||| Sbjct: 1083 accgttagagatggtgaatgttcctcctgccatctcatcaattgagagtgccccctcagt 1024 Query: 502 agccttctttgcaaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagc 561 |||||||||||||||| |||||||||||| || ||||| ||||||||||| ||||||| Sbjct: 1023 agccttctttgcaagggcgtttatccctttctcaatgtccgcaaagttcatgttatcagc 964 Query: 562 atctcggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcgac 621 |||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||| || Sbjct: 963 atctcggataacaggcaccacaagacccttggaagtaccaacagcaacactgatgtcaac 904 Query: 622 atagtctctgtaaatgatgtcatcaccgtcaatgacagcattcacgattggctggttctg 681 |||||||||||| |||||||||||||| |||||||||||||| || ||||| ||||| || Sbjct: 903 atagtctctgtatatgatgtcatcaccatcaatgacagcattgacaattggttggttttg 844 Query: 682 gagtccagaaacagcagcctt 702 ||| | | |||||||||||| Sbjct: 843 aagtgctgtaacagcagcctt 823
>dbj|AK121002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045A15, full insert sequence Length = 1696 Score = 589 bits (297), Expect = e-165 Identities = 450/501 (89%) Strand = Plus / Minus Query: 202 ttatatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaa 261 ||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||| Sbjct: 1414 ttatatgtcgaggagcaatctccgtgggtcttcaaccacgtccttgatgcggcgcaggaa 1355 Query: 262 gtagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 1354 gtagacagcttctctgccgtcgatcagcctgtggtcatatgtcagcgcaaggtacatcat 1295 Query: 322 gggcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatccc 381 ||||| || || ||| |||||||||||||||| ||||| || |||||||||||||| || Sbjct: 1294 tggcctcgcgagaatgttgccgtccacgaccacagggcgttgtacaatggagtgcattcc 1235 Query: 382 aagaatcgctgactgtggggggttgatgatgggcgtgctaataaggcttccgtagacacc 441 |||||| || |||||||||||||||||||| || ||||| |||||||||||||| ||||| Sbjct: 1234 aagaatagcagactgtggggggttgatgataggtgtgctgataaggcttccgtaaacacc 1175 Query: 442 accgttggagatggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagt 501 |||||| |||||||||||||||||||| |||||||| |||||||| || ||||||||||| Sbjct: 1174 accgttagagatggtgaatgttcctcctgccatctcatcaattgagagtgccccctcagt 1115 Query: 502 agccttctttgcaaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagc 561 |||||||||||||||| |||||||||||| || ||||| ||||||||||| ||||||| Sbjct: 1114 agccttctttgcaagggcgtttatccctttctcaatgtccgcaaagttcatgttatcagc 1055 Query: 562 atctcggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcgac 621 |||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||| || Sbjct: 1054 atctcggataacaggcaccacaagacccttggaagtaccaacagcaacactgatgtcaac 995 Query: 622 atagtctctgtaaatgatgtcatcaccgtcaatgacagcattcacgattggctggttctg 681 |||||||||||| |||||||||||||| |||||||||||||| || ||||| ||||| || Sbjct: 994 atagtctctgtatatgatgtcatcaccatcaatgacagcattgacaattggttggttttg 935 Query: 682 gagtccagaaacagcagcctt 702 ||| | | |||||||||||| Sbjct: 934 aagtgctgtaacagcagcctt 914 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/50 (94%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 110 gcaactctttgtatcagtcaaaaatttgcacggcattattttccagacaa 159 |||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 1507 gcaactctttgtatcagtcaaaaatttgca--gtattattttccagacaa 1460 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%), Gaps = 5/62 (8%) Strand = Plus / Minus Query: 4 atctattgctcttgcattgaaaattaaagcaaatttcgtcgtttagggaactacacccca 63 |||||||||||||||||||||| | |||||||||| ||||||||||||||| |||| Sbjct: 1679 atctattgctcttgcattgaaactaaaagcaaatt-----gtttagggaactacatccca 1625 Query: 64 aa 65 || Sbjct: 1624 aa 1623
>dbj|AK104832.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A09, full insert sequence Length = 1749 Score = 589 bits (297), Expect = e-165 Identities = 450/501 (89%) Strand = Plus / Minus Query: 202 ttatatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaa 261 ||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||| Sbjct: 1467 ttatatgtcgaggagcaatctccgtgggtcttcaaccacgtccttgatgcggcgcaggaa 1408 Query: 262 gtagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 1407 gtagacagcttctctgccgtcgatcagcctgtggtcatatgtcagcgcaaggtacatcat 1348 Query: 322 gggcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatccc 381 ||||| || || ||| |||||||||||||||| ||||| || |||||||||||||| || Sbjct: 1347 tggcctcgcgagaatgttgccgtccacgaccacagggcgttgtacaatggagtgcattcc 1288 Query: 382 aagaatcgctgactgtggggggttgatgatgggcgtgctaataaggcttccgtagacacc 441 |||||| || |||||||||||||||||||| || ||||| |||||||||||||| ||||| Sbjct: 1287 aagaatagcagactgtggggggttgatgataggtgtgctgataaggcttccgtaaacacc 1228 Query: 442 accgttggagatggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagt 501 |||||| |||||||||||||||||||| |||||||| |||||||| || ||||||||||| Sbjct: 1227 accgttagagatggtgaatgttcctcctgccatctcatcaattgagagtgccccctcagt 1168 Query: 502 agccttctttgcaaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagc 561 |||||||||||||||| |||||||||||| || ||||| ||||||||||| ||||||| Sbjct: 1167 agccttctttgcaagggcgtttatccctttctcaatgtccgcaaagttcatgttatcagc 1108 Query: 562 atctcggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcgac 621 |||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||| || Sbjct: 1107 atctcggataacaggcaccacaagacccttggaagtaccaacagcaacactgatgtcaac 1048 Query: 622 atagtctctgtaaatgatgtcatcaccgtcaatgacagcattcacgattggctggttctg 681 |||||||||||| |||||||||||||| |||||||||||||| || ||||| ||||| || Sbjct: 1047 atagtctctgtatatgatgtcatcaccatcaatgacagcattgacaattggttggttttg 988 Query: 682 gagtccagaaacagcagcctt 702 ||| | | |||||||||||| Sbjct: 987 aagtgctgtaacagcagcctt 967 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/50 (94%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 110 gcaactctttgtatcagtcaaaaatttgcacggcattattttccagacaa 159 |||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 1560 gcaactctttgtatcagtcaaaaatttgca--gtattattttccagacaa 1513 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%), Gaps = 5/62 (8%) Strand = Plus / Minus Query: 4 atctattgctcttgcattgaaaattaaagcaaatttcgtcgtttagggaactacacccca 63 |||||||||||||||||||||| | |||||||||| ||||||||||||||| |||| Sbjct: 1732 atctattgctcttgcattgaaactaaaagcaaatt-----gtttagggaactacatccca 1678 Query: 64 aa 65 || Sbjct: 1677 aa 1676
>dbj|AK068154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130A17, full insert sequence Length = 1772 Score = 581 bits (293), Expect = e-162 Identities = 449/501 (89%) Strand = Plus / Minus Query: 202 ttatatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaa 261 ||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||| Sbjct: 1493 ttatatgtcgaggagcaatctccgtgggtcttcaaccacgtccttgatgcggcgcaggaa 1434 Query: 262 gtagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 1433 gtagacagcttctctgccgtcgatcagcctgtggtcatatgtcagcgcaaggtacatcat 1374 Query: 322 gggcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatccc 381 ||||| || || ||| |||||||||||||||| ||||| || |||||||||| ||| || Sbjct: 1373 tggcctcgcgagaatgttgccgtccacgaccacagggcgttgtacaatggagtacattcc 1314 Query: 382 aagaatcgctgactgtggggggttgatgatgggcgtgctaataaggcttccgtagacacc 441 |||||| || |||||||||||||||||||| || ||||| |||||||||||||| ||||| Sbjct: 1313 aagaatagcagactgtggggggttgatgataggtgtgctgataaggcttccgtaaacacc 1254 Query: 442 accgttggagatggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagt 501 |||||| |||||||||||||||||||| |||||||| |||||||| || ||||||||||| Sbjct: 1253 accgttagagatggtgaatgttcctcctgccatctcatcaattgagagtgccccctcagt 1194 Query: 502 agccttctttgcaaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagc 561 |||||||||||||||| |||||||||||| || ||||| ||||||||||| ||||||| Sbjct: 1193 agccttctttgcaagggcgtttatccctttctcaatgtccgcaaagttcatgttatcagc 1134 Query: 562 atctcggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcgac 621 |||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||| || Sbjct: 1133 atctcggataacaggcaccacaagacccttggaagtaccaacagcaacactgatgtcaac 1074 Query: 622 atagtctctgtaaatgatgtcatcaccgtcaatgacagcattcacgattggctggttctg 681 |||||||||||| |||||||||||||| |||||||||||||| || ||||| ||||| || Sbjct: 1073 atagtctctgtatatgatgtcatcaccatcaatgacagcattgacaattggttggttttg 1014 Query: 682 gagtccagaaacagcagcctt 702 ||| | | |||||||||||| Sbjct: 1013 aagtgctgtaacagcagcctt 993 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/50 (94%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 110 gcaactctttgtatcagtcaaaaatttgcacggcattattttccagacaa 159 |||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 1586 gcaactctttgtatcagtcaaaaatttgca--gtattattttccagacaa 1539 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%), Gaps = 5/62 (8%) Strand = Plus / Minus Query: 4 atctattgctcttgcattgaaaattaaagcaaatttcgtcgtttagggaactacacccca 63 |||||||||||||||||||||| | |||||||||| ||||||||||||||| |||| Sbjct: 1756 atctattgctcttgcattgaaactaaaagcaaatt-----gtttagggaactacatccca 1702 Query: 64 aa 65 || Sbjct: 1701 aa 1700
>gb|BT018803.1| Zea mays clone EL01N0529E04.d mRNA sequence Length = 1807 Score = 525 bits (265), Expect = e-146 Identities = 442/501 (88%) Strand = Plus / Minus Query: 202 ttatatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaa 261 ||||||||| || |||| ||||| |||||||||||| || ||||||||||| |||||||| Sbjct: 1478 ttatatgtcaagcagcaacctcctggggtcctcgacaacatccttgatgcgccgcaggaa 1419 Query: 262 gtagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 | |||| || |||||||| ||||||| |||||||||||| |||||||| ||||||||||| Sbjct: 1418 gaagacagcctctctgccatcgatcaacctgtggtcgtaagtcagcgcaaggtacatcat 1359 Query: 322 gggcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatccc 381 ||||| ||||||||| || | ||| ||||| ||||| ||||||||||| |||||||| Sbjct: 1358 tggcctcgcaaggatgtcaccattcacaaccacagggcgttgcacaatggaatgcatccc 1299 Query: 382 aagaatcgctgactgtggggggttgatgatgggcgtgctaataaggcttccgtagacacc 441 ||||| | |||||||| ||||||||||| || ||||| | |||||||| |||||||| Sbjct: 1298 cagaatagacgactgtggagggttgatgataggtgtgctgaggaggcttccatagacacc 1239 Query: 442 accgttggagatggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagt 501 ||||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||| Sbjct: 1238 accgttggagatggtgaatgttcctcctgccatgtcatcaattgagagcgccccctcagt 1179 Query: 502 agccttctttgcaaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagc 561 || |||||||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 1178 tgctttctttgcaaggttgtttatccctttctcaatgtcagcaaagttcatggtatcagc 1119 Query: 562 atctcggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcgac 621 |||||||||||| || |||||||| |||||||||||||||||||||||||| | ||| || Sbjct: 1118 atctcggataacaggaaccacaaggcccttggaagtgccaacagcaacactgatgtctac 1059 Query: 622 atagtctctgtaaatgatgtcatcaccgtcaatgacagcattcacgattggctggttctg 681 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||| || Sbjct: 1058 gtagtctctgtatatgatgtcatcaccatcaatgacagcattgacaattggctggttttg 999 Query: 682 gagtccagaaacagcagcctt 702 ||| |||||||||||||||| Sbjct: 998 aagtgcagaaacagcagcctt 978 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 122 atcagtcaaaaatttgcacggcattattt 150 ||||||||||||||| || |||||||||| Sbjct: 1567 atcagtcaaaaatttccatggcattattt 1539
>gb|BT019313.1| Zea mays clone Contig986.F mRNA sequence Length = 1773 Score = 509 bits (257), Expect = e-141 Identities = 440/501 (87%) Strand = Plus / Plus Query: 202 ttatatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaa 261 ||||||||| || |||| ||||| |||||||||||| || ||||||||||| |||||||| Sbjct: 430 ttatatgtcaagcagcaacctcctggggtcctcgacaacatccttgatgcgccgcaggaa 489 Query: 262 gtagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 | |||| || |||||||| ||||||| |||||||||||| |||||||| ||||||||||| Sbjct: 490 gaagacagcctctctgccatcgatcaacctgtggtcgtaagtcagcgcaaggtacatcat 549 Query: 322 gggcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatccc 381 ||||| ||||||||| || | ||| ||||| ||||| ||||||||||| |||||||| Sbjct: 550 tggcctcgcaaggatgtcaccattcacaaccacagggcgttgcacaatggaatgcatccc 609 Query: 382 aagaatcgctgactgtggggggttgatgatgggcgtgctaataaggcttccgtagacacc 441 ||||| | |||||||| ||||||||||| || ||||| | |||||||| |||||||| Sbjct: 610 cagaatagacgactgtggagggttgatgataggtgtgctgaggaggcttccatagacacc 669 Query: 442 accgttggagatggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagt 501 |||||||||||| |||||||||||||| ||||| || ||||| || |||||||||||||| Sbjct: 670 accgttggagatagtgaatgttcctcctgccatgtcatcaatcgagagcgccccctcagt 729 Query: 502 agccttctttgcaaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagc 561 ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 730 tgccttctttgcaaggttgtttatccctttctcaatgtcagcaaagttcatggtatcagc 789 Query: 562 atctcggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcgac 621 |||||||||||| || |||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 790 atctcggataacaggaaccacaaggcccttggaagtgccaacagcaacactgacgtctac 849 Query: 622 atagtctctgtaaatgatgtcatcaccgtcaatgacagcattcacgattggctggttctg 681 ||||||||||| ||||||||||| || |||||||||||||| || || |||||||| || Sbjct: 850 gtagtctctgtatatgatgtcatcgccatcaatgacagcattaacaatgggctggttttg 909 Query: 682 gagtccagaaacagcagcctt 702 ||| |||||||||||||||| Sbjct: 910 aagtgcagaaacagcagcctt 930 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 122 atcagtcaaaaatttgcacggcattattt 150 ||||||||||||||| || |||||||||| Sbjct: 341 atcagtcaaaaatttccatggcattattt 369
>gb|AY103947.1| Zea mays PCO137266 mRNA sequence Length = 2074 Score = 502 bits (253), Expect = e-139 Identities = 439/501 (87%) Strand = Plus / Minus Query: 202 ttatatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaa 261 ||||||||| || |||| ||||| |||||||||||| || ||||||||||| |||||||| Sbjct: 1653 ttatatgtcaagcagcaacctcctggggtcctcgacaacatccttgatgcgccgcaggaa 1594 Query: 262 gtagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 | |||| || |||||||| ||||||| |||||||||||| |||||||| ||| ||||||| Sbjct: 1593 gaagacagcctctctgccatcgatcaacctgtggtcgtaagtcagcgcaaggaacatcat 1534 Query: 322 gggcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatccc 381 ||||| || || ||| || | ||| ||||| ||||| ||||||||||| |||||||| Sbjct: 1533 tggccttgcgagaatgtcaccattcacaaccacagggcgttgcacaatggaatgcatccc 1474 Query: 382 aagaatcgctgactgtggggggttgatgatgggcgtgctaataaggcttccgtagacacc 441 ||||| | |||||||| ||||||||||| || ||||| | |||||||| |||||||| Sbjct: 1473 cagaatagacgactgtggagggttgatgataggtgtgctgaggaggcttccatagacacc 1414 Query: 442 accgttggagatggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagt 501 |||||||||||||||||||||||| || ||||| || |||||||| |||||||||||||| Sbjct: 1413 accgttggagatggtgaatgttccacctgccatgtcatcaattgagagcgccccctcagt 1354 Query: 502 agccttctttgcaaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagc 561 || |||||||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 1353 tgctttctttgcaaggttgtttatccctttctcaatgtcagcaaagttcatggtatcagc 1294 Query: 562 atctcggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcgac 621 |||||||||||| || |||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 1293 atctcggataacaggaaccacaaggcccttggaagtgccaacagcaacactgacgtctac 1234 Query: 622 atagtctctgtaaatgatgtcatcaccgtcaatgacagcattcacgattggctggttctg 681 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||| || Sbjct: 1233 gtagtctctgtatatgatgtcatcaccatcaatgacagcattgacaattggctggttttg 1174 Query: 682 gagtccagaaacagcagcctt 702 ||| |||||||||||||||| Sbjct: 1173 aagtgcagaaacagcagcctt 1153
>gb|AY581835.1| Cynodon dactylon putative 2-oxoglutarate dehydrogenase E2 subunit mRNA, partial cds Length = 741 Score = 418 bits (211), Expect = e-113 Identities = 427/499 (85%) Strand = Plus / Minus Query: 201 cttatatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcagga 260 |||||||||| || |||| |||| ||||| || || || ||||||||||| || |||| Sbjct: 502 cttatatgtcaagcagcaatctcctagggtcttcaaccacatccttgatgcgccggagga 443 Query: 261 agtagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatca 320 || |||| ||||||||||| || ||||||||||||||||| |||| ||||||||||||| Sbjct: 442 agaagacagcttctctgccatcaatcagcctgtggtcgtacgtcaaagcgaggtacatca 383 Query: 321 tgggcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatcc 380 | ||||| || |||||| || | ||| ||||| || || ||||||||||| ||||||| Sbjct: 382 ttggcctcgcgaggatgtcaccattcacaaccacaggtcgttgcacaatggaatgcatcc 323 Query: 381 caagaatcgctgactgtggggggttgatgatgggcgtgctaataaggcttccgtagacac 440 ||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 322 caagaattgctgactgtggcgggttgatgataggcgtgctaataaggcttccatagacac 263 Query: 441 caccgttggagatggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcag 500 |||| || || |||||||| |||||||| ||||| || |||||||| || ||||| |||| Sbjct: 262 caccatttgaaatggtgaaggttcctcctgccatgtcatcaattgatagtgccccttcag 203 Query: 501 tagccttctttgcaaggttgtttatccctttttcgatgtcagcaaagttcattgtatcag 560 | ||||||||||||||||||||||||||||| || |||||||| || ||||| | |||| Sbjct: 202 tcgccttctttgcaaggttgtttatccctttctcaatgtcagcgaaattcatgttttcag 143 Query: 561 catctcggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcga 620 ||||||||||||| || |||||||||||||| ||||| |||||||||||||| || || | Sbjct: 142 catctcggataacgggaaccacaagaccctttgaagtaccaacagcaacactgacatcaa 83 Query: 621 catagtctctgtaaatgatgtcatcaccgtcaatgacagcattcacgattggctggttct 680 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||| | Sbjct: 82 tgtagtctctgtatatgatgtcatcaccatcaatgacagcattgacaattggctggtttt 23 Query: 681 ggagtccagaaacagcagc 699 | ||| |||| || ||||| Sbjct: 22 gaagtgcagacacggcagc 4 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 123 tcagtcaaaaatttgcacggcattattt 150 |||||||||||||||||||| ||||||| Sbjct: 577 tcagtcaaaaatttgcacggtattattt 550
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 256 bits (129), Expect = 9e-65 Identities = 180/197 (91%) Strand = Plus / Minus Query: 394 ctgtggggggttgatgatgggcgtgctaataaggcttccgtagacaccaccgttggagat 453 |||||||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 44236 ctgtggggggttgatgataggtgtgctgataaggcttccgtaaacaccaccgttagagat 44177 Query: 454 ggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagtagccttctttgc 513 ||||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 44176 ggtgaatgttcctcctgccatctcatcaattgagagtgccccctcagtagccttctttgc 44117 Query: 514 aaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagcatctcggataac 573 |||| |||||||||||| || ||||| ||||||||||| ||||||||||||||||||| Sbjct: 44116 aagggcgtttatccctttctcaatgtccgcaaagttcatgttatcagcatctcggataac 44057 Query: 574 cggcaccacaagaccct 590 |||||||||||||||| Sbjct: 44056 aggcaccacaagaccct 44040 Score = 228 bits (115), Expect = 2e-56 Identities = 175/195 (89%) Strand = Plus / Minus Query: 202 ttatatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaa 261 ||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||| Sbjct: 44516 ttatatgtcgaggagcaatctccgtgggtcttcaaccacgtccttgatgcggcgcaggaa 44457 Query: 262 gtagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 44456 gtagacagcttctctgccgtcgatcagcctgtggtcatatgtcagcgcaaggtacatcat 44397 Query: 322 gggcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatccc 381 ||||| || || ||| |||||||||||||||| ||||| || |||||||||||||| || Sbjct: 44396 tggcctcgcgagaatgttgccgtccacgaccacagggcgttgtacaatggagtgcattcc 44337 Query: 382 aagaatcgctgactg 396 |||||| || ||||| Sbjct: 44336 aagaatagcagactg 44322 Score = 115 bits (58), Expect = 2e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 588 ccttggaagtgccaacagcaacactaacgtcgacatagtctctgtaaatgatgtcatcac 647 |||||||||| |||||||||||||| | ||| |||||||||||||| ||||||||||||| Sbjct: 43943 ccttggaagtaccaacagcaacactgatgtcaacatagtctctgtatatgatgtcatcac 43884 Query: 648 cgtcaatgacagcattcacgattggctggttctggagtccagaaacagcagcct 701 | |||||||||||||| || ||||| ||||| || ||| | | ||||||||||| Sbjct: 43883 catcaatgacagcattgacaattggttggttttgaagtgctgtaacagcagcct 43830 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/50 (94%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 110 gcaactctttgtatcagtcaaaaatttgcacggcattattttccagacaa 159 |||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 44609 gcaactctttgtatcagtcaaaaatttgca--gtattattttccagacaa 44562 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%), Gaps = 5/62 (8%) Strand = Plus / Minus Query: 4 atctattgctcttgcattgaaaattaaagcaaatttcgtcgtttagggaactacacccca 63 |||||||||||||||||||||| | |||||||||| ||||||||||||||| |||| Sbjct: 44781 atctattgctcttgcattgaaactaaaagcaaatt-----gtttagggaactacatccca 44727 Query: 64 aa 65 || Sbjct: 44726 aa 44725
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 256 bits (129), Expect = 9e-65 Identities = 180/197 (91%) Strand = Plus / Minus Query: 394 ctgtggggggttgatgatgggcgtgctaataaggcttccgtagacaccaccgttggagat 453 |||||||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 19392982 ctgtggggggttgatgataggtgtgctgataaggcttccgtaaacaccaccgttagagat 19392923 Query: 454 ggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagtagccttctttgc 513 ||||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 19392922 ggtgaatgttcctcctgccatctcatcaattgagagtgccccctcagtagccttctttgc 19392863 Query: 514 aaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagcatctcggataac 573 |||| |||||||||||| || ||||| ||||||||||| ||||||||||||||||||| Sbjct: 19392862 aagggcgtttatccctttctcaatgtccgcaaagttcatgttatcagcatctcggataac 19392803 Query: 574 cggcaccacaagaccct 590 |||||||||||||||| Sbjct: 19392802 aggcaccacaagaccct 19392786 Score = 228 bits (115), Expect = 2e-56 Identities = 175/195 (89%) Strand = Plus / Minus Query: 202 ttatatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaa 261 ||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||| Sbjct: 19393262 ttatatgtcgaggagcaatctccgtgggtcttcaaccacgtccttgatgcggcgcaggaa 19393203 Query: 262 gtagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 19393202 gtagacagcttctctgccgtcgatcagcctgtggtcatatgtcagcgcaaggtacatcat 19393143 Query: 322 gggcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatccc 381 ||||| || || ||| |||||||||||||||| ||||| || |||||||||||||| || Sbjct: 19393142 tggcctcgcgagaatgttgccgtccacgaccacagggcgttgtacaatggagtgcattcc 19393083 Query: 382 aagaatcgctgactg 396 |||||| || ||||| Sbjct: 19393082 aagaatagcagactg 19393068 Score = 115 bits (58), Expect = 2e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 588 ccttggaagtgccaacagcaacactaacgtcgacatagtctctgtaaatgatgtcatcac 647 |||||||||| |||||||||||||| | ||| |||||||||||||| ||||||||||||| Sbjct: 19392689 ccttggaagtaccaacagcaacactgatgtcaacatagtctctgtatatgatgtcatcac 19392630 Query: 648 cgtcaatgacagcattcacgattggctggttctggagtccagaaacagcagcct 701 | |||||||||||||| || ||||| ||||| || ||| | | ||||||||||| Sbjct: 19392629 catcaatgacagcattgacaattggttggttttgaagtgctgtaacagcagcct 19392576 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/50 (94%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 110 gcaactctttgtatcagtcaaaaatttgcacggcattattttccagacaa 159 |||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 19393355 gcaactctttgtatcagtcaaaaatttgca--gtattattttccagacaa 19393308 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%), Gaps = 5/62 (8%) Strand = Plus / Minus Query: 4 atctattgctcttgcattgaaaattaaagcaaatttcgtcgtttagggaactacacccca 63 |||||||||||||||||||||| | |||||||||| ||||||||||||||| |||| Sbjct: 19393527 atctattgctcttgcattgaaactaaaagcaaatt-----gtttagggaactacatccca 19393473 Query: 64 aa 65 || Sbjct: 19393472 aa 19393471
>ref|XM_465972.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1353 Score = 222 bits (112), Expect = 1e-54 Identities = 403/500 (80%) Strand = Plus / Minus Query: 203 tatatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaag 262 |||||||| ||||||| ||| || || || || || || |||||||| ||||||| |||| Sbjct: 1352 tatatgtcaaggagcaaccttcgtggatcttcaaccacatccttgatacggcgcaagaag 1293 Query: 263 tagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatg 322 || ||||| || || ||||||||||| ||||| || | || || ||||||||||| Sbjct: 1292 agaacagcttccctaccatcgatcagcctatggtcatacattagtgcaaggtacatcatt 1233 Query: 323 ggcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatccca 382 ||||| ||||||| ||||| | ||| ||||| | || || |||||||| ||||| || Sbjct: 1232 ggccttgcaaggacactgccattcacaaccacaagacgttgaacaatggaatgcattccg 1173 Query: 383 agaatcgctgactgtggggggttgatgatgggcgtgctaataaggcttccgtagacacca 442 || || | ||||||||| | || ||||| || || || ||||||||||| || |||||| Sbjct: 1172 aggattgatgactgtggagaattaatgataggtgtactgataaggcttccataaacacca 1113 Query: 443 ccgttggagatggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagta 502 || || |||||||| || || ||||| ||||| | || || ||| | ||||||||||| Sbjct: 1112 ccatttgagatggtaaaggtccctcctgccatattgttgatggactgtgccccctcagtt 1053 Query: 503 gccttctttgcaaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagca 562 ||||||||||||||||||||||| || || || ||||||||||| ||||||| ||| | Sbjct: 1052 gccttctttgcaaggttgtttatacccttctctatgtcagcaaaattcattgcatctata 993 Query: 563 tctcggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcgaca 622 || ||||||| |||||||||||||||||||||| |||||||||||||| | ||| | Sbjct: 992 tcgtggataacaagcaccacaagacccttggaagttccaacagcaacactgatgtcaatg 933 Query: 623 tagtctctgtaaatgatgtcatcaccgtcaatgacagcattcacgattggctggttctgg 682 || || ||||| |||||||||||||| |||||||||||||| || ||||| ||||| || Sbjct: 932 tactccctgtagatgatgtcatcaccatcaatgacagcattaacaattggttggttttga 873 Query: 683 agtccagaaacagcagcctt 702 || |||||||||||||||| Sbjct: 872 agcgcagaaacagcagcctt 853
>emb|AJ223803.1|ART223803 Arabidopsis thaliana mRNA for 2-oxoglutarate dehydrogenase E2 subunit Length = 1724 Score = 131 bits (66), Expect = 3e-27 Identities = 348/442 (78%) Strand = Plus / Minus Query: 204 atatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaagt 263 |||||||||| || |||||| | || || || || || ||||| || ||||||| ||| | Sbjct: 1476 atatgtcgagaagaagcctctgaggatcttccacaacatccttaatacggcgcaagaaat 1417 Query: 264 agacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatgg 323 | || || ||||| || || || ||||| || ||||| |||||||||| |||||||| | Sbjct: 1416 acacagcctctcttccatcaattagcctatgatcgtaagtcagcgcgacatacatcattg 1357 Query: 324 gcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatcccaa 383 |||| | || | ||| || |||| |||| || || |||||||| || ||||| |||| Sbjct: 1356 gcctcggaactacgcttcctcccacaaccattggacgttgcacaatcgaatgcattccaa 1297 Query: 384 gaatcgctgactgtggggggttgatgatgggcgtgctaataaggcttccgtagacaccac 443 |||| || ||||| || ||||||||||| || ||||| ||||| ||||| |||||||||| Sbjct: 1296 gaatagcagactgaggagggttgatgataggagtgcttataagacttccatagacaccac 1237 Query: 444 cgttggagatggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagtag 503 | || || | ||||||| |||||| |||||||| || ||||| | | || ||||||| Sbjct: 1236 catttgatactgtgaatgatcctcctgccatctcatcgattgatatggttccttcagtag 1177 Query: 504 ccttctttgcaaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagcat 563 ||||||| ||||| |||||| ||| || |||||||||||||||||| | ||||||| Sbjct: 1176 ccttcttagcaagaccgtttattgttttctctatgtcagcaaagttcattttgtcagcat 1117 Query: 564 ctcggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcgacat 623 ||| || || || || ||||||||||| || || |||||||| | ||| | || || | Sbjct: 1116 ctcttatgactggaactacaagacccttagaggtaccaacagcgatactgatatccacgt 1057 Query: 624 agtctctgtaaatgatgtcatc 645 |||||||||||||||| ||||| Sbjct: 1056 agtctctgtaaatgatatcatc 1035
>ref|NM_124889.3| Arabidopsis thaliana acyltransferase/ dihydrolipoyllysine-residue succinyltransferase AT5G55070 mRNA, complete cds Length = 1945 Score = 123 bits (62), Expect = 8e-25 Identities = 347/442 (78%) Strand = Plus / Minus Query: 204 atatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaagt 263 |||||||||| || |||||| | || || || || || ||||| || ||||||| ||| | Sbjct: 1535 atatgtcgagaagaagcctctgaggatcttccacaacatccttaatacggcgcaagaaat 1476 Query: 264 agacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatgg 323 | || || ||||| || || || ||||| || ||||| |||||||||| |||||||| | Sbjct: 1475 acacagcctctcttccatcaattagcctatgatcgtaagtcagcgcgacatacatcattg 1416 Query: 324 gcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatcccaa 383 |||| | || | ||| || |||| |||| || || |||||||| || ||||| |||| Sbjct: 1415 gcctcggaactacgcttcctcccacaaccattggacgttgcacaattgaatgcattccaa 1356 Query: 384 gaatcgctgactgtggggggttgatgatgggcgtgctaataaggcttccgtagacaccac 443 |||| || ||||| || ||||||||||| || ||||| ||||| ||||| |||||||||| Sbjct: 1355 gaatagcagactgaggagggttgatgataggagtgcttataagacttccatagacaccac 1296 Query: 444 cgttggagatggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagtag 503 | || || | ||||||| |||||| |||||||| || ||||| | | || ||||||| Sbjct: 1295 catttgatactgtgaatgatcctcctgccatctcatcgattgatatggttccttcagtag 1236 Query: 504 ccttctttgcaaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagcat 563 ||||||| || || |||||| ||| || |||||||||||||||||| | ||||||| Sbjct: 1235 ccttcttagcgagaccgtttattgttttctctatgtcagcaaagttcattttgtcagcat 1176 Query: 564 ctcggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcgacat 623 ||| || || || || ||||||||||| || || |||||||| | ||| | || || | Sbjct: 1175 ctcttatgactggaactacaagacccttagaggtaccaacagcgatactgatatccacgt 1116 Query: 624 agtctctgtaaatgatgtcatc 645 |||||||||||||||| ||||| Sbjct: 1115 agtctctgtaaatgatatcatc 1094
>gb|AY128726.1| Arabidopsis thaliana 2-oxoglutarate dehydrogenase E2 subunit (At5g55070) mRNA, complete cds Length = 1575 Score = 123 bits (62), Expect = 8e-25 Identities = 347/442 (78%) Strand = Plus / Minus Query: 204 atatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaagt 263 |||||||||| || |||||| | || || || || || ||||| || ||||||| ||| | Sbjct: 1393 atatgtcgagaagaagcctctgaggatcttccacaacatccttaatacggcgcaagaaat 1334 Query: 264 agacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatgg 323 | || || ||||| || || || ||||| || ||||| |||||||||| |||||||| | Sbjct: 1333 acacagcctctcttccatcaattagcctatgatcgtaagtcagcgcgacatacatcattg 1274 Query: 324 gcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatcccaa 383 |||| | || | ||| || |||| |||| || || |||||||| || ||||| |||| Sbjct: 1273 gcctcggaactacgcttcctcccacaaccattggacgttgcacaattgaatgcattccaa 1214 Query: 384 gaatcgctgactgtggggggttgatgatgggcgtgctaataaggcttccgtagacaccac 443 |||| || ||||| || ||||||||||| || ||||| ||||| ||||| |||||||||| Sbjct: 1213 gaatagcagactgaggagggttgatgataggagtgcttataagacttccatagacaccac 1154 Query: 444 cgttggagatggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagtag 503 | || || | ||||||| |||||| |||||||| || ||||| | | || ||||||| Sbjct: 1153 catttgatactgtgaatgatcctcctgccatctcatcgattgatatggttccttcagtag 1094 Query: 504 ccttctttgcaaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagcat 563 ||||||| || || |||||| ||| || |||||||||||||||||| | ||||||| Sbjct: 1093 ccttcttagcgagaccgtttattgttttctctatgtcagcaaagttcattttgtcagcat 1034 Query: 564 ctcggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcgacat 623 ||| || || || || ||||||||||| || || |||||||| | ||| | || || | Sbjct: 1033 ctcttatgactggaactacaagacccttagaggtaccaacagcgatactgatatccacgt 974 Query: 624 agtctctgtaaatgatgtcatc 645 |||||||||||||||| ||||| Sbjct: 973 agtctctgtaaatgatatcatc 952
>gb|AY042897.1| Arabidopsis thaliana 2-oxoglutarate dehydrogenase E2 subunit (MCO15.2) mRNA, complete cds Length = 1794 Score = 123 bits (62), Expect = 8e-25 Identities = 347/442 (78%) Strand = Plus / Minus Query: 204 atatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaagt 263 |||||||||| || |||||| | || || || || || ||||| || ||||||| ||| | Sbjct: 1519 atatgtcgagaagaagcctctgaggatcttccacaacatccttaatacggcgcaagaaat 1460 Query: 264 agacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatgg 323 | || || ||||| || || || ||||| || ||||| |||||||||| |||||||| | Sbjct: 1459 acacagcctctcttccatcaattagcctatgatcgtaagtcagcgcgacatacatcattg 1400 Query: 324 gcctggcaaggatgctgccgtccacgaccacggggcgctgcacaatggagtgcatcccaa 383 |||| | || | ||| || |||| |||| || || |||||||| || ||||| |||| Sbjct: 1399 gcctcggaactacgcttcctcccacaaccattggacgttgcacaattgaatgcattccaa 1340 Query: 384 gaatcgctgactgtggggggttgatgatgggcgtgctaataaggcttccgtagacaccac 443 |||| || ||||| || ||||||||||| || ||||| ||||| ||||| |||||||||| Sbjct: 1339 gaatagcagactgaggagggttgatgataggagtgcttataagacttccatagacaccac 1280 Query: 444 cgttggagatggtgaatgttcctcccgccatctcgtcaattgacagcgccccctcagtag 503 | || || | ||||||| |||||| |||||||| || ||||| | | || ||||||| Sbjct: 1279 catttgatactgtgaatgatcctcctgccatctcatcgattgatatggttccttcagtag 1220 Query: 504 ccttctttgcaaggttgtttatccctttttcgatgtcagcaaagttcattgtatcagcat 563 ||||||| || || |||||| ||| || |||||||||||||||||| | ||||||| Sbjct: 1219 ccttcttagcgagaccgtttattgttttctctatgtcagcaaagttcattttgtcagcat 1160 Query: 564 ctcggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcgacat 623 ||| || || || || ||||||||||| || || |||||||| | ||| | || || | Sbjct: 1159 ctcttatgactggaactacaagacccttagaggtaccaacagcgatactgatatccacgt 1100 Query: 624 agtctctgtaaatgatgtcatc 645 |||||||||||||||| ||||| Sbjct: 1099 agtctctgtaaatgatatcatc 1078
>emb|BX831487.1|CNS0A1W1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZE01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1720 Score = 111 bits (56), Expect = 3e-21 Identities = 227/284 (79%) Strand = Plus / Minus Query: 362 tgcacaatggagtgcatcccaagaatcgctgactgtggggggttgatgatgggcgtgcta 421 |||||||| || ||||| |||||||| || ||||| || ||||||||||| || ||||| Sbjct: 1324 tgcacaattgaatgcattccaagaatagcagactgaggagggttgatgataggagtgctt 1265 Query: 422 ataaggcttccgtagacaccaccgttggagatggtgaatgttcctcccgccatctcgtca 481 || || ||||| ||||||||||| || || | ||||||| |||||| |||||||| || Sbjct: 1264 atgagacttccatagacaccaccatttgatactgtgaatgatcctcctgccatctcatcg 1205 Query: 482 attgacagcgccccctcagtagccttctttgcaaggttgtttatccctttttcgatgtca 541 ||||| | | || |||||||||||||| || || |||||| ||| || |||||| Sbjct: 1204 attgatatggttccttcagtagccttcttagcgagaccgtttattgttttctctatgtca 1145 Query: 542 gcaaagttcattgtatcagcatctcggataaccggcaccacaagacccttggaagtgcca 601 |||||||||||| | |||||||||| || || || || ||||||||||| || || ||| Sbjct: 1144 gcaaagttcattttgtcagcatctcttatgactggaactacaagacccttagaggtacca 1085 Query: 602 acagcaacactaacgtcgacatagtctctgtaaatgatgtcatc 645 ||||| | ||| | || || ||||||||||||||||| ||||| Sbjct: 1084 acagcgatactgatatccacgtagtctctgtaaatgatatcatc 1041
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 422 ataaggcttccgtagacaccaccgttggagatggtgaatgttcctcccgccatctcgtca 481 ||||||||||| || |||||||| || |||||||| || || ||||| ||||| | || Sbjct: 18651722 ataaggcttccataaacaccaccatttgagatggtaaaggtccctcctgccatattgttg 18651663 Query: 482 attgacagcgccccctcagtagccttctttgcaaggttgtttatccctttttcgatgtca 541 || ||| | ||||||||||| ||||||||||||||||||||||| || || || |||||| Sbjct: 18651662 atggactgtgccccctcagttgccttctttgcaaggttgtttatacccttctctatgtca 18651603 Query: 542 gcaaagttcattgtatcagcatctcggataaccggcaccacaagaccct 590 ||||| ||||||| ||| ||| ||||||| ||||||||||||||| Sbjct: 18651602 gcaaaattcattgcatctatatcgtggataacaagcaccacaagaccct 18651554 Score = 91.7 bits (46), Expect = 3e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 588 ccttggaagtgccaacagcaacactaacgtcgacatagtctctgtaaatgatgtcatcac 647 |||||||||| |||||||||||||| | ||| | || || ||||| ||||||||||||| Sbjct: 18651467 ccttggaagttccaacagcaacactgatgtcaatgtactccctgtagatgatgtcatcac 18651408 Query: 648 cgtcaatgacagcattcacgattggctggttctggagtccagaaacagcagcct 701 | |||||||||||||| || ||||| ||||| || || ||||||||||||||| Sbjct: 18651407 catcaatgacagcattaacaattggttggttttgaagcgcagaaacagcagcct 18651354 Score = 50.1 bits (25), Expect = 0.010 Identities = 106/133 (79%) Strand = Plus / Minus Query: 203 tatatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaag 262 |||||||| ||||||| ||| || || || || || || |||||||| ||||||| |||| Sbjct: 18652017 tatatgtcaaggagcaaccttcgtggatcttcaaccacatccttgatacggcgcaagaag 18651958 Query: 263 tagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatg 322 || ||||| || || ||||||||||| ||||| || | || || ||||||||||| Sbjct: 18651957 agaacagcttccctaccatcgatcagcctatggtcatacattagtgcaaggtacatcatt 18651898 Query: 323 ggcctggcaagga 335 ||||| ||||||| Sbjct: 18651897 ggccttgcaagga 18651885
>dbj|AP004062.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1471_E11 Length = 103912 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 422 ataaggcttccgtagacaccaccgttggagatggtgaatgttcctcccgccatctcgtca 481 ||||||||||| || |||||||| || |||||||| || || ||||| ||||| | || Sbjct: 78078 ataaggcttccataaacaccaccatttgagatggtaaaggtccctcctgccatattgttg 78019 Query: 482 attgacagcgccccctcagtagccttctttgcaaggttgtttatccctttttcgatgtca 541 || ||| | ||||||||||| ||||||||||||||||||||||| || || || |||||| Sbjct: 78018 atggactgtgccccctcagttgccttctttgcaaggttgtttatacccttctctatgtca 77959 Query: 542 gcaaagttcattgtatcagcatctcggataaccggcaccacaagaccct 590 ||||| ||||||| ||| ||| ||||||| ||||||||||||||| Sbjct: 77958 gcaaaattcattgcatctatatcgtggataacaagcaccacaagaccct 77910 Score = 91.7 bits (46), Expect = 3e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 588 ccttggaagtgccaacagcaacactaacgtcgacatagtctctgtaaatgatgtcatcac 647 |||||||||| |||||||||||||| | ||| | || || ||||| ||||||||||||| Sbjct: 77823 ccttggaagttccaacagcaacactgatgtcaatgtactccctgtagatgatgtcatcac 77764 Query: 648 cgtcaatgacagcattcacgattggctggttctggagtccagaaacagcagcct 701 | |||||||||||||| || ||||| ||||| || || ||||||||||||||| Sbjct: 77763 catcaatgacagcattaacaattggttggttttgaagcgcagaaacagcagcct 77710 Score = 50.1 bits (25), Expect = 0.010 Identities = 106/133 (79%) Strand = Plus / Minus Query: 203 tatatgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaag 262 |||||||| ||||||| ||| || || || || || || |||||||| ||||||| |||| Sbjct: 78373 tatatgtcaaggagcaaccttcgtggatcttcaaccacatccttgatacggcgcaagaag 78314 Query: 263 tagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatg 322 || ||||| || || ||||||||||| ||||| || | || || ||||||||||| Sbjct: 78313 agaacagcttccctaccatcgatcagcctatggtcatacattagtgcaaggtacatcatt 78254 Query: 323 ggcctggcaagga 335 ||||| ||||||| Sbjct: 78253 ggccttgcaagga 78241
>emb|BX831002.1|CNS0A1WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZG10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1790 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Minus Query: 362 tgcacaatggagtgcatcccaagaatcgctgactgtggggggttgatgatgggcgtgcta 421 |||||||| || ||| | |||||||| || ||||| || ||||||||||| || ||||| Sbjct: 1377 tgcacaattgaatgccttccaagaatagcagactgaggagggttgatgataggagtgctt 1318 Query: 422 ataaggcttccgtagacaccaccgttggagatggtgaatgttcctcccgccatctcgtca 481 || || ||||| ||||||||||| || || | ||||||| |||||| |||||||| || Sbjct: 1317 atgagacttccatagacaccaccatttgatactgtgaatgatcctcctgccatctcatcg 1258 Query: 482 attgacagcgccccctcagtagccttctttgcaaggttgtttatccctttttcgatgtca 541 ||||| | | || |||||||||||||| || || |||||| ||| || |||||| Sbjct: 1257 attgatatggttccttcagtagccttcttagcgagaccgtttattgttttctctatgtca 1198 Query: 542 gcaaagttcattgtatcagcatctcggataaccggcaccacaagacccttggaagtgcca 601 |||||||||||| | |||||||||| || || || || ||||||||||| || || ||| Sbjct: 1197 gcaaagttcattttgtcagcatctcttatgactgggactacaagacccttagaggtacca 1138 Query: 602 acagc 606 ||||| Sbjct: 1137 acagc 1133
>emb|CR692238.1|CNS0FX2Y Tetraodon nigroviridis full-length cDNA Length = 1817 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 206 atgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaagtag 265 ||||||||||||||| |||||||||||| || || |||||| ||||| |||| | Sbjct: 1396 atgtcgaggagcagcacccgggggtcctccaccaccgacttgatcttgcgcaagaaggtg 1337 Query: 266 acggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatggg 324 || |||||||| ||||||||||| | ||||||||| ||||| |||| |||||||||||| Sbjct: 1336 accgcttctctcccgtcgatcagacggtggtcgtacgtcagggcgacgtacatcatggg 1278
>emb|CR653995.2|CNS0F3LD Tetraodon nigroviridis full-length cDNA Length = 1832 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 206 atgtcgaggagcagcctccgggggtcctcgacgacgtccttgatgcggcgcaggaagtag 265 ||||||||||||||| |||||||||||| || || |||||| ||||| |||| | Sbjct: 1398 atgtcgaggagcagcacccgggggtcctccaccaccgacttgatcttgcgcaagaaggtg 1339 Query: 266 acggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatggg 324 || |||||||| ||||||||||| | ||||||||| ||||| |||| |||||||||||| Sbjct: 1338 accgcttctctcccgtcgatcagacggtggtcgtacgtcagggcgacgtacatcatggg 1280
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 277 gccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatgggcc 326 |||||||||||||| ||||||||| ||||||||||| ||||||||||||| Sbjct: 1250977 gccgtcgatcagccggtggtcgtaggtcagcgcgagatacatcatgggcc 1250928
>dbj|AB010071.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCO15 Length = 82918 Score = 75.8 bits (38), Expect = 2e-10 Identities = 134/166 (80%) Strand = Plus / Minus Query: 401 gggttgatgatgggcgtgctaataaggcttccgtagacaccaccgttggagatggtgaat 460 ||||||||||| || ||||| ||||| ||||| ||||||||||| || || | |||||| Sbjct: 8834 gggttgatgataggagtgcttataagacttccatagacaccaccatttgatactgtgaat 8775 Query: 461 gttcctcccgccatctcgtcaattgacagcgccccctcagtagccttctttgcaaggttg 520 | |||||| |||||||| || ||||| | | || |||||||||||||| || || | Sbjct: 8774 gatcctcctgccatctcatcgattgatatggttccttcagtagccttcttagcgagaccg 8715 Query: 521 tttatccctttttcgatgtcagcaaagttcattgtatcagcatctc 566 ||||| ||| || |||||||||||||||||| | |||||||||| Sbjct: 8714 tttattgttttctctatgtcagcaaagttcattttgtcagcatctc 8669
>gb|BT013306.1| Lycopersicon esculentum clone 134953R, mRNA sequence Length = 1878 Score = 63.9 bits (32), Expect = 7e-07 Identities = 98/120 (81%) Strand = Plus / Minus Query: 566 cggataaccggcaccacaagacccttggaagtgccaacagcaacactaacgtcgacatag 625 ||||||||||| || ||||||||||| | || |||||||| | ||| | ||| | ||| Sbjct: 1163 cggataaccggaacaacaagaccctttggtgtaccaacagcgatactgatgtctatataa 1104 Query: 626 tctctgtaaatgatgtcatcaccgtcaatgacagcattcacgattggctggttctggagt 685 || || || |||||||||||||| || || |||||||| || |||||||| ||||||||| Sbjct: 1103 tccctatatatgatgtcatcaccatcgataacagcattaacaattggctgattctggagt 1044 Score = 46.1 bits (23), Expect = 0.16 Identities = 53/63 (84%) Strand = Plus / Minus Query: 259 gaagtagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacat 318 |||| |||| || ||||| || ||||||||||| || ||||||||||| || | |||||| Sbjct: 1470 gaagaagactgcctctcttccatcgatcagcctatgatcgtatgtcagagcaatgtacat 1411 Query: 319 cat 321 ||| Sbjct: 1410 cat 1408
>ref|XM_776429.1| PREDICTED: Strongylocentrotus purpuratus similar to dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) (LOC576084), mRNA Length = 1272 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 264 agacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatgg 323 |||| ||||| |||||||| ||||| |||||||||||||||| |||| ||||||||| | Sbjct: 1210 agaccgcttccctgccgtcaatcagtctgtggtcgtatgtcaaggcgatgtacatcatag 1151 Query: 324 gcct 327 |||| Sbjct: 1150 gcct 1147
>ref|NM_179122.1| Arabidopsis thaliana acyltransferase/ dihydrolipoyllysine-residue succinyltransferase AT4G26910 transcript variant AT4G26910.3 mRNA, complete cds Length = 1565 Score = 60.0 bits (30), Expect = 1e-05 Identities = 99/122 (81%) Strand = Plus / Minus Query: 542 gcaaagttcattgtatcagcatctcggataaccggcaccacaagacccttggaagtgcca 601 |||||||||||| |||||||| ||| || || || || ||||| ||||| || || ||| Sbjct: 909 gcaaagttcattttatcagcacctcttatgactggtactacaagtcccttagaggtacca 850 Query: 602 acagcaacactaacgtcgacatagtctctgtaaatgatgtcatcaccgtcaatgacagca 661 ||||| | ||| | || |||||||||||||| ||||| ||||| |||||||| || ||| Sbjct: 849 acagcgatactgatatccacatagtctctgtatatgatatcatccccgtcaataactgca 790 Query: 662 tt 663 || Sbjct: 789 tt 788 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 242 tccttgatgcggcgcaggaagtagacggcttctctgccgtcgatcagcctgtg 294 ||||||| |||||||||||||| || || ||||| || || ||||||||||| Sbjct: 1209 tccttgacacggcgcaggaagtacacagcctctctaccatcaatcagcctgtg 1157
>ref|NM_179121.1| Arabidopsis thaliana acyltransferase/ dihydrolipoyllysine-residue succinyltransferase AT4G26910 transcript variant AT4G26910.2 mRNA, complete cds Length = 1708 Score = 60.0 bits (30), Expect = 1e-05 Identities = 99/122 (81%) Strand = Plus / Minus Query: 542 gcaaagttcattgtatcagcatctcggataaccggcaccacaagacccttggaagtgcca 601 |||||||||||| |||||||| ||| || || || || ||||| ||||| || || ||| Sbjct: 1052 gcaaagttcattttatcagcacctcttatgactggtactacaagtcccttagaggtacca 993 Query: 602 acagcaacactaacgtcgacatagtctctgtaaatgatgtcatcaccgtcaatgacagca 661 ||||| | ||| | || |||||||||||||| ||||| ||||| |||||||| || ||| Sbjct: 992 acagcgatactgatatccacatagtctctgtatatgatatcatccccgtcaataactgca 933 Query: 662 tt 663 || Sbjct: 932 tt 931 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 242 tccttgatgcggcgcaggaagtagacggcttctctgccgtcgatcagcctgtg 294 ||||||| |||||||||||||| || || ||||| || || ||||||||||| Sbjct: 1352 tccttgacacggcgcaggaagtacacagcctctctaccatcaatcagcctgtg 1300
>ref|NM_118825.2| Arabidopsis thaliana acyltransferase/ dihydrolipoyllysine-residue succinyltransferase AT4G26910 transcript variant AT4G26910.1 mRNA, complete cds Length = 1807 Score = 60.0 bits (30), Expect = 1e-05 Identities = 99/122 (81%) Strand = Plus / Minus Query: 542 gcaaagttcattgtatcagcatctcggataaccggcaccacaagacccttggaagtgcca 601 |||||||||||| |||||||| ||| || || || || ||||| ||||| || || ||| Sbjct: 1151 gcaaagttcattttatcagcacctcttatgactggtactacaagtcccttagaggtacca 1092 Query: 602 acagcaacactaacgtcgacatagtctctgtaaatgatgtcatcaccgtcaatgacagca 661 ||||| | ||| | || |||||||||||||| ||||| ||||| |||||||| || ||| Sbjct: 1091 acagcgatactgatatccacatagtctctgtatatgatatcatccccgtcaataactgca 1032 Query: 662 tt 663 || Sbjct: 1031 tt 1030 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 242 tccttgatgcggcgcaggaagtagacggcttctctgccgtcgatcagcctgtg 294 ||||||| |||||||||||||| || || ||||| || || ||||||||||| Sbjct: 1451 tccttgacacggcgcaggaagtacacagcctctctaccatcaatcagcctgtg 1399
>gb|BT000926.1| Arabidopsis thaliana clone C105123 putative dihydrolipoamide succinyltransferase (At4g26910) mRNA, complete cds Length = 1423 Score = 60.0 bits (30), Expect = 1e-05 Identities = 99/122 (81%) Strand = Plus / Minus Query: 542 gcaaagttcattgtatcagcatctcggataaccggcaccacaagacccttggaagtgcca 601 |||||||||||| |||||||| ||| || || || || ||||| ||||| || || ||| Sbjct: 1052 gcaaagttcattttatcagcacctcttatgactggtactacaagtcccttagaggtacca 993 Query: 602 acagcaacactaacgtcgacatagtctctgtaaatgatgtcatcaccgtcaatgacagca 661 ||||| | ||| | || |||||||||||||| ||||| ||||| |||||||| || ||| Sbjct: 992 acagcgatactgatatccacatagtctctgtatatgatatcatccccgtcaataactgca 933 Query: 662 tt 663 || Sbjct: 932 tt 931 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 242 tccttgatgcggcgcaggaagtagacggcttctctgccgtcgatcagcctgtg 294 ||||||| |||||||||||||| || || ||||| || || ||||||||||| Sbjct: 1352 tccttgacacggcgcaggaagtacacagcctctctaccatcaatcagcctgtg 1300
>gb|AY096643.1| Arabidopsis thaliana At4g26910 mRNA sequence Length = 1498 Score = 60.0 bits (30), Expect = 1e-05 Identities = 99/122 (81%) Strand = Plus / Minus Query: 542 gcaaagttcattgtatcagcatctcggataaccggcaccacaagacccttggaagtgcca 601 |||||||||||| |||||||| ||| || || || || ||||| ||||| || || ||| Sbjct: 907 gcaaagttcattttatcagcacctcttatgactggtactacaagtcccttagaggtacca 848 Query: 602 acagcaacactaacgtcgacatagtctctgtaaatgatgtcatcaccgtcaatgacagca 661 ||||| | ||| | || |||||||||||||| ||||| ||||| |||||||| || ||| Sbjct: 847 acagcgatactgatatccacatagtctctgtatatgatatcatccccgtcaataactgca 788 Query: 662 tt 663 || Sbjct: 787 tt 786 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 242 tccttgatgcggcgcaggaagtagacggcttctctgccgtcgatcagcctgtg 294 ||||||| |||||||||||||| || || ||||| || || ||||||||||| Sbjct: 1207 tccttgacacggcgcaggaagtacacagcctctctaccatcaatcagcctgtg 1155
>gb|AY084248.1| Arabidopsis thaliana clone 101175 mRNA, complete sequence Length = 1721 Score = 60.0 bits (30), Expect = 1e-05 Identities = 99/122 (81%) Strand = Plus / Minus Query: 542 gcaaagttcattgtatcagcatctcggataaccggcaccacaagacccttggaagtgcca 601 |||||||||||| |||||||| ||| || || || || ||||| ||||| || || ||| Sbjct: 1152 gcaaagttcattttatcagcacctcttatgactggtactacaagtcccttagaggtacca 1093 Query: 602 acagcaacactaacgtcgacatagtctctgtaaatgatgtcatcaccgtcaatgacagca 661 ||||| | ||| | || |||||||||||||| ||||| ||||| |||||||| || ||| Sbjct: 1092 acagcgatactgatatccacatagtctctgtatatgatatcatccccgtcaataactgca 1033 Query: 662 tt 663 || Sbjct: 1032 tt 1031 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 242 tccttgatgcggcgcaggaagtagacggcttctctgccgtcgatcagcctgtg 294 ||||||| |||||||||||||| || || ||||| || || ||||||||||| Sbjct: 1452 tccttgacacggcgcaggaagtacacagcctctctaccatcaatcagcctgtg 1400
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 265 gacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 ||||||||| | |||||||||||| | ||||||||| ||||||||| ||||||||| Sbjct: 1660846 gacggcttcgcggccgtcgatcaggcggtggtcgtaactcagcgcgatgtacatcat 1660790
>gb|U40758.1|FRU40758 Fugu rubripes dihydrolipoamide succinyltransferase gene, partial cds Length = 2748 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 339 tgccgtccacgaccacggggcgctgcacaatggagtgcatcccaagaatcgctgactgtg 398 ||||||| ||| |||| |||||||| | |||| |||||| || || || || ||||||| Sbjct: 2096 tgccgtcgacggccaccgggcgctggaaaatgccgtgcatgcccaggatggcggactgtg 2037 Query: 399 gggggttgatgatgggcgtgc 419 ||||||||||||| ||||||| Sbjct: 2036 gggggttgatgatcggcgtgc 2016
>ref|XM_504044.1| Yarrowia lipolytica CLIB122, YALI0E16929g predicted mRNA Length = 1344 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 437 acaccaccgttggagatggtgaatgttcctcccgccat 474 ||||||||||||||||||||||| ||||| || ||||| Sbjct: 1112 acaccaccgttggagatggtgaaggttccgccggccat 1075
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 52.0 bits (26), Expect = 0.003 Identities = 41/46 (89%) Strand = Plus / Plus Query: 276 tgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 ||||||||||||| | ||||||||| | |||||| ||||||||||| Sbjct: 3923913 tgccgtcgatcaggcggtggtcgtaggacagcgccaggtacatcat 3923958
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 437 acaccaccgttggagatggtgaatgttcctcccgccat 474 ||||||||||||||||||||||| ||||| || ||||| Sbjct: 2006056 acaccaccgttggagatggtgaaggttccgccggccat 2006093
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 278 ccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatgggcc 326 |||||||||| || ||||||||| ||| ||| |||||||||||||||| Sbjct: 3443654 ccgtcgatcaaccggtggtcgtagctcaacgccaggtacatcatgggcc 3443606
>ref|NM_214397.1| Sus scrofa similar to dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) (DLST), mRNA Length = 2547 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 266 acggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatgggc 325 ||||| ||||| ||||||||||||| ||| || || ||||| || | ||||||||||||| Sbjct: 1329 acggcctctctaccgtcgatcagccggtgatcatacgtcagggccacgtacatcatgggc 1270 Query: 326 c 326 | Sbjct: 1269 c 1269 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 392 gactgtggggggttgatgatgggcgt 417 ||||| |||||||||||||||||||| Sbjct: 1203 gactgcggggggttgatgatgggcgt 1178
>dbj|AB035206.1| Sus scrofa mRNA for dihydrolipoamide succinyltransferase, complete cds Length = 2547 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 266 acggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatgggc 325 ||||| ||||| ||||||||||||| ||| || || ||||| || | ||||||||||||| Sbjct: 1329 acggcctctctaccgtcgatcagccggtgatcatacgtcagggccacgtacatcatgggc 1270 Query: 326 c 326 | Sbjct: 1269 c 1269 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 392 gactgtggggggttgatgatgggcgt 417 ||||| |||||||||||||||||||| Sbjct: 1203 gactgcggggggttgatgatgggcgt 1178
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 620 acatagtctctgtaaatgatgtcatcaccgtcaatgacagcatt 663 |||||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 24580 acatagtctctgtatatgatatcatccccgtcaataactgcatt 24623 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 242 tccttgatgcggcgcaggaagtagacggcttctctgccgtcgatcagcctgtg 294 ||||||| |||||||||||||| || || ||||| || || ||||||||||| Sbjct: 24022 tccttgacacggcgcaggaagtacacagcctctctaccatcaatcagcctgtg 24074
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 620 acatagtctctgtaaatgatgtcatcaccgtcaatgacagcatt 663 |||||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 68737 acatagtctctgtatatgatatcatccccgtcaataactgcatt 68780 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 242 tccttgatgcggcgcaggaagtagacggcttctctgccgtcgatcagcctgtg 294 ||||||| |||||||||||||| || || ||||| || || ||||||||||| Sbjct: 68179 tccttgacacggcgcaggaagtacacagcctctctaccatcaatcagcctgtg 68231
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 266 acggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 ||||||||| | ||||||||||| | ||| ||||| | |||||| ||||||||||| Sbjct: 1925885 acggcttctttaccgtcgatcaggcggtgatcgtaggacagcgccaggtacatcat 1925830
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 277 gccgtcgatcagcctgtggtcgtatgtcagcg 308 |||||||||||||| ||||||||| ||||||| Sbjct: 2161029 gccgtcgatcagccggtggtcgtaggtcagcg 2160998
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 278 ccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 |||||||||| | ||||||||||| |||||| ||||||||||| Sbjct: 4878076 ccgtcgatcatgcggtggtcgtatgacagcgccaggtacatcat 4878119
>ref|XM_864371.1| PREDICTED: Bos taurus similar to dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex), transcript variant 2 (LOC506888), mRNA Length = 1523 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 272 tctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatgggcc 326 |||||||| |||||||||| ||| || || ||||| || | |||||||||||||| Sbjct: 1285 tctctgccatcgatcagccggtgatcatacgtcagggccacgtacatcatgggcc 1231
>ref|XM_583400.2| PREDICTED: Bos taurus similar to dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex), transcript variant 1 (LOC506888), mRNA Length = 1452 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 272 tctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatgggcc 326 |||||||| |||||||||| ||| || || ||||| || | |||||||||||||| Sbjct: 1214 tctctgccatcgatcagccggtgatcatacgtcagggccacgtacatcatgggcc 1160
>gb|BT012996.1| Lycopersicon esculentum clone 114217F, mRNA sequence Length = 1897 Score = 46.1 bits (23), Expect = 0.16 Identities = 86/107 (80%) Strand = Plus / Minus Query: 596 gtgccaacagcaacactaacgtcgacatagtctctgtaaatgatgtcatcaccgtcaatg 655 ||||||||||| | ||| | ||| |||||||| | || |||||||||||||| ||||| Sbjct: 1113 gtgccaacagctatactgatgtctacatagtcccgatatatgatgtcatcaccatcaata 1054 Query: 656 acagcattcacgattggctggttctggagtccagaaacagcagcctt 702 || ||||| || || || || ||||||||| || |||||| ||||| Sbjct: 1053 actgcatttactataggttgattctggagtgcactaacagctgcctt 1007
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 44.1 bits (22), Expect = 0.62 Identities = 43/50 (86%) Strand = Plus / Plus Query: 277 gccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatgggcc 326 ||||||||| | || ||||||||| | ||| || |||||||||||||||| Sbjct: 2685006 gccgtcgatgatccggtggtcgtaggacagggccaggtacatcatgggcc 2685055
>gb|AE004586.1| Pseudomonas aeruginosa PAO1, section 147 of 529 of the complete genome Length = 15358 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Minus Query: 276 tgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 ||||||||||||| | ||||||||| | |||||| || |||||||| Sbjct: 13585 tgccgtcgatcagacggtggtcgtaggacagcgccagatacatcat 13540 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 ccaccgttggagatggtgaa 459 |||||||||||||||||||| Sbjct: 13421 ccaccgttggagatggtgaa 13402
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Plus Query: 276 tgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 ||||||||||||| | ||| ||||| | |||||| ||||||||||| Sbjct: 4731610 tgccgtcgatcaggcggtgatcgtacgacagcgccaggtacatcat 4731655
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Plus Query: 276 tgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 ||||||||||||| | ||||||||| | || |||||||||||||| Sbjct: 83143 tgccgtcgatcaggcggtggtcgtaggacacggcgaggtacatcat 83188 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Minus Query: 277 gccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcatg 322 |||||||||||| | ||||||| | | ||||| ||||||||||||| Sbjct: 33747 gccgtcgatcaggcggtggtcgaacgacagcgagaggtacatcatg 33702
>ref|NM_118824.2| Arabidopsis thaliana AT-HF AT4G26900 (AT-HF) mRNA, complete cds Length = 2514 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 242 tccttgatgcggcgcaggaagtagacggcttctctgccgtcgatcagcctgtg 294 ||||||| |||||||||||||| || || ||||| || || ||||||||||| Sbjct: 2370 tccttgacacggcgcaggaagtacacagcctctctaccatcaatcagcctgtg 2422
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 431 ccgtagacaccaccgttggagatggtgaa 459 |||||||| || ||||||||||||||||| Sbjct: 3125793 ccgtagaccccgccgttggagatggtgaa 3125821
>ref|XM_453789.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D16522g predicted mRNA Length = 1407 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 435 agacaccaccgttggagatggtgaa 459 ||||||||||||| ||||||||||| Sbjct: 1177 agacaccaccgttagagatggtgaa 1153
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 431 ccgtagacaccaccgttggagatggtgaa 459 |||||||| || ||||||||||||||||| Sbjct: 265335 ccgtagacgccgccgttggagatggtgaa 265363
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 435 agacaccaccgttggagatggtgaa 459 ||||||||||||| ||||||||||| Sbjct: 1395080 agacaccaccgttagagatggtgaa 1395104
>gb|AC117495.3| Homo sapiens 12 BAC RP11-619O7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168747 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 638 atgtcatcaccgtcaatgacagcat 662 |||||||||||||||||| |||||| Sbjct: 64168 atgtcatcaccgtcaatgtcagcat 64192
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 42.1 bits (21), Expect = 2.4 Identities = 48/57 (84%) Strand = Plus / Minus Query: 265 gacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 ||||| |||| | |||||||| ||||||||||| || | |||||| || |||||||| Sbjct: 1435951 gacggattcttttccgtcgataagcctgtggtcataagacagcgccagatacatcat 1435895
>gb|AC104040.3| Homo sapiens chromosome 8, clone CTD-2023L15, complete sequence Length = 136646 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 aactctttgtatcagtcaaaa 132 ||||||||||||||||||||| Sbjct: 7939 aactctttgtatcagtcaaaa 7919
>gb|DQ086164.1| Ictalurus punctatus dihydrolipoamide S-succinyltransferase mRNA, partial cds Length = 561 Score = 42.1 bits (21), Expect = 2.4 Identities = 60/73 (82%) Strand = Plus / Minus Query: 253 gcgcaggaagtagacggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgag 312 |||||||||| |||||| |||||||| || |||| | |||||||||||||| || | Sbjct: 513 gcgcaggaaggtgacggcctctctgccatcaatcaaacgatggtcgtatgtcagggcaac 454 Query: 313 gtacatcatgggc 325 |||||||||||| Sbjct: 453 atacatcatgggc 441
>gb|AC018377.6|AC018377 Homo sapiens, clone RP11-4C16, complete sequence Length = 163644 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 aactctttgtatcagtcaaaa 132 ||||||||||||||||||||| Sbjct: 111799 aactctttgtatcagtcaaaa 111779
>ref|XM_309608.2| Anopheles gambiae str. PEST ENSANGP00000010144 (ENSANGG00000007655), partial mRNA Length = 1448 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 648 cgtcaatgacagcattcacga 668 ||||||||||||||||||||| Sbjct: 673 cgtcaatgacagcattcacga 653
>gb|AC118698.7| Mus musculus chromosome 1, clone RP24-82I5, complete sequence Length = 233783 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 627 ctctgtaaatgatgtcatca 646 |||||||||||||||||||| Sbjct: 105629 ctctgtaaatgatgtcatca 105648
>ref|XM_360606.1| Magnaporthe grisea 70-15 hypothetical protein (MG03149.4) partial mRNA Length = 1266 Score = 40.1 bits (20), Expect = 9.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 266 acggcttctctgccgtcgatcagcctgtggtcgtatgtcagcgcgaggtacatcat 321 |||||||| ||||| || | ||| | ||||||||| |||| |||||||||||||| Sbjct: 1208 acggcttccctgccatcaagcagacggtggtcgtaggtcaaggcgaggtacatcat 1153
>gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome 7, complete sequence Length = 208880 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tgaaaattaaagcaaatttc 40 |||||||||||||||||||| Sbjct: 188419 tgaaaattaaagcaaatttc 188438
>gb|BC068302.1| Mus musculus cDNA sequence BC049806, mRNA (cDNA clone MGC:76460 IMAGE:30431671), complete cds Length = 4176 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 ctctgtaaatgatgtcatca 646 |||||||||||||||||||| Sbjct: 957 ctctgtaaatgatgtcatca 938
>ref|NM_172513.2| Mus musculus cDNA sequence BC049806 (BC049806), mRNA Length = 4176 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 ctctgtaaatgatgtcatca 646 |||||||||||||||||||| Sbjct: 957 ctctgtaaatgatgtcatca 938
>gb|AC122232.3| Mus musculus BAC clone RP23-136G1 from chromosome 7, complete sequence Length = 182272 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tgaaaattaaagcaaatttc 40 |||||||||||||||||||| Sbjct: 48256 tgaaaattaaagcaaatttc 48275
>gb|AC117234.4| Mus musculus BAC clone RP23-410J2 from chromosome 6, complete sequence Length = 193027 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 ttatcatatcctcaactcaaatct 93 |||||||||||| ||||||||||| Sbjct: 119993 ttatcatatcctgaactcaaatct 119970
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 374 tgcatcccaagaatcgctgactgtggggggttgatgatgggcgt 417 |||||||||||||| || ||||| || ||||| ||||| ||||| Sbjct: 4812062 tgcatcccaagaatggccgactgcggcgggttaatgattggcgt 4812019
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 374 tgcatcccaagaatcgctgactgtggggggttgatgatgggcgt 417 |||||||||||||| || ||||| || ||||| ||||| ||||| Sbjct: 4528276 tgcatcccaagaatggccgactgcggcgggttaatgattggcgt 4528233
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 9.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 383 agaatcgctgactgtggggggttgatgatgggcgtg 418 ||||| || ||||| || |||||||||||||||||| Sbjct: 2754551 agaatggcggactgcggtgggttgatgatgggcgtg 2754586
>gb|AC109707.5| Rattus norvegicus 13 BAC CH230-157O1 (Children's Hospital Oakland Research Institute) complete sequence Length = 205150 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 attgctcttgcattgaaaat 27 |||||||||||||||||||| Sbjct: 51361 attgctcttgcattgaaaat 51342
>gb|AC131631.5| Rattus norvegicus 2 BAC CH230-16C23 (Children's Hospital Oakland Research Institute) complete sequence Length = 207805 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ccccctcagtagccttcttt 511 |||||||||||||||||||| Sbjct: 154095 ccccctcagtagccttcttt 154076
>emb|AL596026.13| Zebrafish DNA sequence from clone BUSM1-234G15 in linkage group 17 Contains the sly1 gene for suppressor of ypt1, a novel gene similar to AP4 (adaptor-related protein complex 4, sigma subunit), the 3' part of the strn3 gene for striatin, calmodulin binding protein 3, a novel gene similar to COCH (coagulation factor C homolog, cochlin), a gene for a novel 7 transmembrane receptor (rhodopsin family) and a novel gene similar to KIAA1333, complete sequence Length = 127993 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 653 atgacagcattcacgattgg 672 |||||||||||||||||||| Sbjct: 112064 atgacagcattcacgattgg 112083
>emb|AJ581481.1|AAC581481 Aspergillus aculeatus mRNA for polygalacturonase 2 (pg2 gene) Length = 1361 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 642 catcaccgtcaatgacagca 661 |||||||||||||||||||| Sbjct: 433 catcaccgtcaatgacagca 414
>gb|AC110717.11| Homo sapiens 3 BAC RP11-419H8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 56528 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ctcttgcattgaaaattaaa 31 |||||||||||||||||||| Sbjct: 36583 ctcttgcattgaaaattaaa 36602
>emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in linkage group 17, complete sequence Length = 153540 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 653 atgacagcattcacgattgg 672 |||||||||||||||||||| Sbjct: 103445 atgacagcattcacgattgg 103464
>gb|AF031325.1| Geobacillus thermoleovorans catechol 2,3-dioxygenase (pheB) and phenol hydroxylase (pheA) genes, complete cds Length = 3808 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tgaaaattaaagcaaatttc 40 |||||||||||||||||||| Sbjct: 2473 tgaaaattaaagcaaatttc 2454
>dbj|AK144602.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730008B18 product:Weakly similar to DRCTNNB1A homolog [Mus musculus], full insert sequence Length = 4587 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 ctctgtaaatgatgtcatca 646 |||||||||||||||||||| Sbjct: 986 ctctgtaaatgatgtcatca 967
>dbj|AK168372.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920001H24 product:Weakly similar to DRCTNNB1A, full insert sequence Length = 4234 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 ctctgtaaatgatgtcatca 646 |||||||||||||||||||| Sbjct: 1039 ctctgtaaatgatgtcatca 1020
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 acaccaccgttggagatggt 456 |||||||||||||||||||| Sbjct: 322158 acaccaccgttggagatggt 322139
>dbj|AK052638.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630010C10 product:weakly similar to DRCTNNB1A [Mus musculus], full insert sequence Length = 2345 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 ctctgtaaatgatgtcatca 646 |||||||||||||||||||| Sbjct: 976 ctctgtaaatgatgtcatca 957
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 gcgaggtacatcatgggcct 327 |||||||||||||||||||| Sbjct: 279199 gcgaggtacatcatgggcct 279218
>emb|X52432.1|AVSUCCTR A.vinelandii gene for succinyltransferase Length = 1500 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 ccaccgttggagatggtgaa 459 |||||||||||||||||||| Sbjct: 1113 ccaccgttggagatggtgaa 1094
>ref|NM_211529.1| Eremothecium gossypii AGL200Wp (AGL200W), mRNA Length = 1311 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 acaccaccgttggagatggt 456 |||||||||||||||||||| Sbjct: 1079 acaccaccgttggagatggt 1060
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 gcgaggtacatcatgggcct 327 |||||||||||||||||||| Sbjct: 1614477 gcgaggtacatcatgggcct 1614458
>gb|BC049806.1| Mus musculus cDNA clone IMAGE:6333365, containing frame-shift errors Length = 4218 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 ctctgtaaatgatgtcatca 646 |||||||||||||||||||| Sbjct: 986 ctctgtaaatgatgtcatca 967
>gb|AC149281.2| Mus musculus BAC clone RP23-287D14 from 19, complete sequence Length = 188944 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 gacatagtctctgtaaatga 638 |||||||||||||||||||| Sbjct: 85369 gacatagtctctgtaaatga 85388
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gacgacgtccttgatgcggc 254 |||||||||||||||||||| Sbjct: 104826 gacgacgtccttgatgcggc 104807
>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome Length = 1197687 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 agcgcgaggtacatcatgggcctg 328 |||||||| ||||||||||||||| Sbjct: 981886 agcgcgagatacatcatgggcctg 981909 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,326,487 Number of Sequences: 3902068 Number of extensions: 5326487 Number of successful extensions: 102227 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101401 Number of HSP's gapped (non-prelim): 781 length of query: 702 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 679 effective length of database: 17,143,297,704 effective search space: 11640299141016 effective search space used: 11640299141016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
