ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags39o03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY109932.1| Zea mays CL35695_1 mRNA sequence Length = 855 Score = 287 bits (145), Expect = 2e-74 Identities = 208/229 (90%) Strand = Plus / Plus Query: 425 aagatgggaactgtcctgtgtgtggagcaccaagcaagacctccctaatgacttcttgtg 484 |||||||||| || ||||||| ||| |||||||||||||| ||||| |||||||| |||| Sbjct: 236 aagatgggaattgccctgtgtatggtgcaccaagcaagacttccctgatgacttcatgtg 295 Query: 485 attccaaaccgtcaatgcccatgttctcataactccagaatgcacctagggttcccaaga 544 |||||| ||| || |||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 296 ccgccaaactgtcgatccccatgttctcataactccaaaatgcacctagtgttcccaaga 355 Query: 545 acccttcatggcacagaaatgttgtttgaacttcacctttggaccaatacttgagggaac 604 ||||||||||||| |||||||| || ||||||||||||||||||||||| || ||||||| Sbjct: 356 acccttcatggcatagaaatgtcgtctgaacttcacctttggaccaatattttagggaac 415 Query: 605 gagaaatcttgtccatagtcttctcatgaccacagacataagcacctcg 653 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gagaaattttgtccatagtcttctcatgaccacagacataagcacctcg 464
>dbj|AK067115.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095O17, full insert sequence Length = 2673 Score = 274 bits (138), Expect = 3e-70 Identities = 189/206 (91%) Strand = Plus / Minus Query: 448 ggagcaccaagcaagacctccctaatgacttcttgtgattccaaaccgtcaatgcccatg 507 ||||| ||||||||||||||||| |||||||| |||| | |||| |||||||| |||||| Sbjct: 1950 ggagcgccaagcaagacctcccttatgacttcatgtgctgccaagccgtcaatacccatg 1891 Query: 508 ttctcataactccagaatgcacctagggttcccaagaacccttcatggcacagaaatgtt 567 |||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 1890 ttctcatagctccaaaatgcacctagtgttcccaagaacccctcatggcacagaaatgtt 1831 Query: 568 gtttgaacttcacctttggaccaatacttgagggaacgagaaatcttgtccatagtcttc 627 |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 1830 gtttgaacttggcctttggaccaatacttgagggaatgggaaatcttgtccatagtcttc 1771 Query: 628 tcatgaccacagacataagcacctcg 653 ||||| ||||||| |||||||||||| Sbjct: 1770 tcatggccacagatataagcacctcg 1745 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 292 gctttcagctctgcattctccctttgtaaccgttcaagctcag 334 ||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 2106 gctttgagctctgtgttctccctttgtaaccgttcaagctcag 2064
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 178 bits (90), Expect = 2e-41 Identities = 129/142 (90%) Strand = Plus / Minus Query: 448 ggagcaccaagcaagacctccctaatgacttcttgtgattccaaaccgtcaatgcccatg 507 ||||| ||||||||||||||||| |||||||| |||| | |||| |||||||| |||||| Sbjct: 5437207 ggagcgccaagcaagacctcccttatgacttcatgtgctgccaagccgtcaatacccatg 5437148 Query: 508 ttctcataactccagaatgcacctagggttcccaagaacccttcatggcacagaaatgtt 567 |||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 5437147 ttctcatagctccaaaatgcacctagtgttcccaagaacccctcatggcacagaaatgtt 5437088 Query: 568 gtttgaacttcacctttggacc 589 |||||||||| |||||||||| Sbjct: 5437087 gtttgaacttggcctttggacc 5437066 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 587 accaatacttgagggaacgagaaatcttgtccatagtcttctcatgaccacagacataag 646 ||||||||||||||||| | |||||||||||||||||||||||||| ||||||| ||||| Sbjct: 5436968 accaatacttgagggaatgggaaatcttgtccatagtcttctcatggccacagatataag 5436909 Query: 647 cacctcg 653 ||||||| Sbjct: 5436908 cacctcg 5436902 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 292 gctttcagctctgcattctccctttgtaaccgttcaagctcag 334 ||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 5437501 gctttgagctctgtgttctccctttgtaaccgttcaagctcag 5437459
>dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529B09 Length = 138188 Score = 178 bits (90), Expect = 2e-41 Identities = 129/142 (90%) Strand = Plus / Minus Query: 448 ggagcaccaagcaagacctccctaatgacttcttgtgattccaaaccgtcaatgcccatg 507 ||||| ||||||||||||||||| |||||||| |||| | |||| |||||||| |||||| Sbjct: 68141 ggagcgccaagcaagacctcccttatgacttcatgtgctgccaagccgtcaatacccatg 68082 Query: 508 ttctcataactccagaatgcacctagggttcccaagaacccttcatggcacagaaatgtt 567 |||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 68081 ttctcatagctccaaaatgcacctagtgttcccaagaacccctcatggcacagaaatgtt 68022 Query: 568 gtttgaacttcacctttggacc 589 |||||||||| |||||||||| Sbjct: 68021 gtttgaacttggcctttggacc 68000 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 587 accaatacttgagggaacgagaaatcttgtccatagtcttctcatgaccacagacataag 646 ||||||||||||||||| | |||||||||||||||||||||||||| ||||||| ||||| Sbjct: 67902 accaatacttgagggaatgggaaatcttgtccatagtcttctcatggccacagatataag 67843 Query: 647 cacctcg 653 ||||||| Sbjct: 67842 cacctcg 67836 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 292 gctttcagctctgcattctccctttgtaaccgttcaagctcag 334 ||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 68435 gctttgagctctgtgttctccctttgtaaccgttcaagctcag 68393
>gb|AY020154.1| Oryza sativa microsatellite MRG2479 containing (CT)X22, genomic sequence Length = 244 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 310 tccctttgtaaccgttcaagctcag 334 ||||||||||||||||||||||||| Sbjct: 244 tccctttgtaaccgttcaagctcag 220
>gb|AC125202.3| Mus musculus BAC clone RP23-231N20 from chromosome 19, complete sequence Length = 207191 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 gataaacaataaagcttacaaa 25 |||||||||||||||||||||| Sbjct: 94795 gataaacaataaagcttacaaa 94774
>emb|BX000486.13| Zebrafish DNA sequence from clone DKEY-149M16 in linkage group 10, complete sequence Length = 195419 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 acacaaacacacttgtataaaa 57 |||||||||||||||||||||| Sbjct: 149126 acacaaacacacttgtataaaa 149105
>emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 in linkage group 20, complete sequence Length = 86384 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caaacacacttgtataaaaagaaaataca 67 |||||||||||| ||||||| |||||||| Sbjct: 16540 caaacacacttggataaaaataaaataca 16512
>gb|AC023716.4| Drosophila melanogaster X BAC RP98-45E21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169124 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 taaacaataaagcttacaaaa 26 ||||||||||||||||||||| Sbjct: 11142 taaacaataaagcttacaaaa 11162
>gb|AC023694.4| Drosophila melanogaster X BAC RP98-18B11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170301 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 taaacaataaagcttacaaaa 26 ||||||||||||||||||||| Sbjct: 53317 taaacaataaagcttacaaaa 53337
>gb|AC159267.2| Mus musculus BAC clone RP23-460B2 from chromosome 14, complete sequence Length = 204629 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 36 acacaaacacacttgtataaaaaga 60 ||||| ||||||||||||||||||| Sbjct: 59325 acacacacacacttgtataaaaaga 59301
>gb|AC084193.5| Homo sapiens BAC clone RP11-545M11 from 2, complete sequence Length = 185671 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 tatatgagcaactctattttg 100 ||||||||||||||||||||| Sbjct: 115076 tatatgagcaactctattttg 115056
>gb|AC154876.7| Mus musculus chromosome 3, clone RP23-190D19, complete sequence Length = 196840 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 tgtgtgtggagcaccaagcaa 461 ||||||||||||||||||||| Sbjct: 81841 tgtgtgtggagcaccaagcaa 81821
>dbj|AP000052.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 23/28, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gtcaatgcccatgttctcataactc 519 |||||||||||| |||||||||||| Sbjct: 57346 gtcaatgcccattttctcataactc 57322
>emb|BX510368.7| Zebrafish DNA sequence from clone DKEY-190P19 in linkage group 20, complete sequence Length = 84687 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caaacacacttgtataaaaagaaaataca 67 |||||||||||| ||||||| |||||||| Sbjct: 13149 caaacacacttggataaaaataaaataca 13121
>dbj|BS000188.1| Pan troglodytes chromosome 22 clone:RP43-084B17, map 22, complete sequences Length = 170687 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gtcaatgcccatgttctcataactc 519 |||||||||||| |||||||||||| Sbjct: 140509 gtcaatgcccattttctcataactc 140485
>gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 of 74 of the complete sequence Length = 307201 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 taaacaataaagcttacaaaa 26 ||||||||||||||||||||| Sbjct: 243144 taaacaataaagcttacaaaa 243164
>dbj|AP001719.1| Homo sapiens genomic DNA, chromosome 21q, section 63/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gtcaatgcccatgttctcataactc 519 |||||||||||| |||||||||||| Sbjct: 278555 gtcaatgcccattttctcataactc 278531
>gb|AF095465.1|AF095465 Oryctolagus cuniculus fibrinogen A-alpha chain gene, partial cds Length = 1152 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 aaccatcaccaagactattacaggt 169 |||||||||||||||| |||||||| Sbjct: 708 aaccatcaccaagactgttacaggt 732
>dbj|AP000167.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B2344F14-f50E8, segment 3/9, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gtcaatgcccatgttctcataactc 519 |||||||||||| |||||||||||| Sbjct: 49314 gtcaatgcccattttctcataactc 49290
>dbj|AP000319.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:Q94A10, complete sequence Length = 27170 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gtcaatgcccatgttctcataactc 519 |||||||||||| |||||||||||| Sbjct: 19821 gtcaatgcccattttctcataactc 19797
>gb|AC022351.3| Drosophila melanogaster clone BACR29G15, complete sequence Length = 179396 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 aaaatgaaatagacacaaacacac 47 ||||||||||||| |||||||||| Sbjct: 50061 aaaatgaaatagatacaaacacac 50084
>gb|AC121542.8| Mus musculus chromosome 15, clone RP24-137J5, complete sequence Length = 164489 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tctcaccatcttgttatttt 221 |||||||||||||||||||| Sbjct: 74706 tctcaccatcttgttatttt 74725
>gb|AC131335.11| Mus musculus chromosome 8, clone RP23-32D9, complete sequence Length = 190133 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 actaacttagctttcagctctgca 306 ||||||| |||||||||||||||| Sbjct: 154721 actaactcagctttcagctctgca 154698
>gb|AC131107.3| Mus musculus BAC clone RP23-339P15 from chromosome 8, complete sequence Length = 214894 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 actaacttagctttcagctctgca 306 ||||||| |||||||||||||||| Sbjct: 185411 actaactcagctttcagctctgca 185434
>gb|AC159197.3| Mus musculus BAC clone RP23-421P10 from chromosome 12, complete sequence Length = 188400 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tgaaccatcaccaagactat 162 |||||||||||||||||||| Sbjct: 108124 tgaaccatcaccaagactat 108143
>emb|BX901914.13| Zebrafish DNA sequence from clone DKEY-27F18 in linkage group 4, complete sequence Length = 149383 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tgtataaaaagaaaatacaa 68 |||||||||||||||||||| Sbjct: 110750 tgtataaaaagaaaatacaa 110769
>emb|AL163533.14| Human DNA sequence from clone RP11-114G1 on chromosome 13q31.3-33.1 Contains a Sp3 transcription factor (SP3) pseudogene and a novel gene, complete sequence Length = 153592 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 aaaaagaaaatacaacatga 73 |||||||||||||||||||| Sbjct: 149824 aaaaagaaaatacaacatga 149843
>emb|AL035088.1|HS3D11 Human DNA sequence from clone RP1-3D11 on chromosome Xq22.1-23 Contains a pseudogene similar to part of keratin 18 (K18, CYK18) (KRT18), a novel gene, the 5' end of a novel gene and two CpG islands, complete sequence Length = 146358 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aaaaagaaaatacaacatga 73 |||||||||||||||||||| Sbjct: 7274 aaaaagaaaatacaacatga 7255
>emb|CR378665.1| Photobacterium profundum SS9; segment 3/12 Length = 347213 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 564 tgttgtttgaacttcacctt 583 |||||||||||||||||||| Sbjct: 149453 tgttgtttgaacttcacctt 149434
>gb|AC087498.8| Homo sapiens chromosome 17, clone RP11-64J4, complete sequence Length = 153482 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 tgcccccacatctcaccatc 211 |||||||||||||||||||| Sbjct: 143164 tgcccccacatctcaccatc 143145
>gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, complete sequence Length = 152794 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 acacacttgtataaaaagaaaata 65 |||||||||||| ||||||||||| Sbjct: 37442 acacacttgtattaaaagaaaata 37419
>tpg|BK003163.1| TPA: TPA_inf: Drosophila melanogaster HDC19232 (HDC19232) gene, complete cds Length = 1605 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 aaaatgaaatagacacaaacacac 47 ||||||||||||| |||||||||| Sbjct: 627 aaaatgaaatagatacaaacacac 650
>gb|AC108475.5| Homo sapiens BAC clone RP11-1365D11 from 4, complete sequence Length = 51975 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 acacttgtataaaaagaaaa 63 |||||||||||||||||||| Sbjct: 41957 acacttgtataaaaagaaaa 41976
>gb|AC112223.2| Homo sapiens chromosome 3 clone RP11-237P23, complete sequence Length = 166745 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 agttgaggctgtttgtgccc 196 |||||||||||||||||||| Sbjct: 53210 agttgaggctgtttgtgccc 53229
>gb|AC067855.6| Homo sapiens chromosome 17, clone RP11-727P19, complete sequence Length = 90159 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 tgcccccacatctcaccatc 211 |||||||||||||||||||| Sbjct: 7259 tgcccccacatctcaccatc 7278
>gb|AC073991.2| Homo sapiens BAC clone RP11-512I20 from 4, complete sequence Length = 159838 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tataaaaagaaaatacaaca 70 |||||||||||||||||||| Sbjct: 151085 tataaaaagaaaatacaaca 151066
>gb|AC156287.12| Mus musculus 6 BAC RP24-243F8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 159846 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 gtccatagtcttctcatgac 634 |||||||||||||||||||| Sbjct: 4302 gtccatagtcttctcatgac 4321
>emb|AL116770.1|CNS01DFU Botrytis cinerea strain T4 cDNA library Length = 780 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 aaatcttgtccatagtcttctcat 631 ||||||||||||||| |||||||| Sbjct: 464 aaatcttgtccatagccttctcat 441
>emb|AL116039.1|CNS01CVJ Botrytis cinerea strain T4 cDNA library Length = 720 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 aaatcttgtccatagtcttctcat 631 ||||||||||||||| |||||||| Sbjct: 397 aaatcttgtccatagccttctcat 374
>emb|AL116584.1|CNS01DAO Botrytis cinerea strain T4 cDNA library Length = 660 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 aaatcttgtccatagtcttctcat 631 ||||||||||||||| |||||||| Sbjct: 190 aaatcttgtccatagccttctcat 167
>emb|AL112099.1|CNS019U3 Botrytis cinerea strain T4 cDNA library Length = 720 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 aaatcttgtccatagtcttctcat 631 ||||||||||||||| |||||||| Sbjct: 499 aaatcttgtccatagccttctcat 476
>gb|AC153616.8| Mus musculus 6 BAC RP23-328I7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195332 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 615 gtccatagtcttctcatgac 634 |||||||||||||||||||| Sbjct: 62176 gtccatagtcttctcatgac 62157
>dbj|AB176525.1| Nicotiana tabacum mat1 mRNA for malonyltransferase MaT1, complete cds Length = 1497 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gcaactctattttggggtaa 106 |||||||||||||||||||| Sbjct: 1422 gcaactctattttggggtaa 1403
>gb|AC004674.1| Homo sapiens X BAC GSHB-600G8 (Genome Systems Human BAC library) complete sequence Length = 158886 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 atgggaactgtcctgtgtgt 447 |||||||||||||||||||| Sbjct: 65494 atgggaactgtcctgtgtgt 65513
>gb|AC117479.4| Homo sapiens 3 BAC RP11-490P18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 145285 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 aaagcttacaaaaatgaaat 33 |||||||||||||||||||| Sbjct: 9388 aaagcttacaaaaatgaaat 9369
>gb|AC025572.13|AC025572 Homo sapiens 3 BAC RP11-58O15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191510 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 acacacttgtataaaaagaaaata 65 |||||||||||| ||||||||||| Sbjct: 27158 acacacttgtattaaaagaaaata 27181
>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence Length = 204416 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 caaaaatgaaatagacacaa 41 |||||||||||||||||||| Sbjct: 97232 caaaaatgaaatagacacaa 97213
>gb|AC006230.11|AC006230 Homo sapiens chromosome 4 clone C0287J14 map 4p16, complete sequence Length = 166998 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tataaaaagaaaatacaaca 70 |||||||||||||||||||| Sbjct: 98359 tataaaaagaaaatacaaca 98340
>gb|AE003502.4| Drosophila melanogaster chromosome X, section 54 of 74 of the complete sequence Length = 304712 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 aaaatgaaatagacacaaacacac 47 ||||||||||||| |||||||||| Sbjct: 200994 aaaatgaaatagatacaaacacac 201017
>emb|CR450845.14| Zebrafish DNA sequence from clone DKEY-63K7 in linkage group 2, complete sequence Length = 232604 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tataaaaagaaaatacaaca 70 |||||||||||||||||||| Sbjct: 178696 tataaaaagaaaatacaaca 178677
>dbj|AP004468.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09A24, TM0003, complete sequence Length = 88828 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ttcaagctcagatttcagaa 343 |||||||||||||||||||| Sbjct: 62288 ttcaagctcagatttcagaa 62307
>emb|AL806533.8| Mouse DNA sequence from clone RP23-468I23 on chromosome 4, complete sequence Length = 201226 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 aagcttacaaaaatgaaata 34 |||||||||||||||||||| Sbjct: 18038 aagcttacaaaaatgaaata 18057 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,102,595 Number of Sequences: 3902068 Number of extensions: 7102595 Number of successful extensions: 152149 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 151982 Number of HSP's gapped (non-prelim): 167 length of query: 657 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 634 effective length of database: 17,143,297,704 effective search space: 10868850744336 effective search space used: 10868850744336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
