ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags39n16 |
|---|---|
| Clone Library Name | barley_pub |
>EF1D1_ORYSA (Q40680) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation| factor 1B-beta 1) (eEF-1B beta 1) Length = 228 Score = 173 bits (439), Expect = 4e-43 Identities = 96/161 (59%), Positives = 103/161 (63%), Gaps = 2/161 (1%) Frame = -1 Query: 678 GVTAPGQGVKVLSSIVPETST--TXXXXXXXXXXXXXXXXDLFXXXXXXXXXXXXXXXXX 505 GVTA GQGVKV S+ VP ST DLF Sbjct: 68 GVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKKAAEERAAA 127 Query: 504 XXXXXXXXXXXXXSVLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKL 325 SVLLDVKPWDDETDM KLEEAVR++KMEGLLWGASKL+PVGYGIKKL Sbjct: 128 VKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKL 187 Query: 324 QIMMTIIDDLVSVDTLIEDHLCVEPANEYIQSCDIVAFNKI 202 QIMMTI+DDLVSVD+LIED+ EPANEYIQSCDIVAFNKI Sbjct: 188 QIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 228
>EF1D2_ORYSA (Q40682) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation| factor 1B-beta 2) (eEF-1B beta 2) Length = 225 Score = 166 bits (419), Expect = 8e-41 Identities = 92/159 (57%), Positives = 101/159 (63%) Frame = -1 Query: 678 GVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXDLFXXXXXXXXXXXXXXXXXXX 499 GVTA G+GVKV S+ S T DLF Sbjct: 68 GVTAEGEGVKVESTAC-SVSPTADQKAPAADEEDDDDVDLFGEETEEEKKAAEERAAAVK 126 Query: 498 XXXXXXXXXXXSVLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQI 319 SVLLDVKPWDDETDM KLEEAVR++KMEGLLWGASKL+PVGYGIKKLQI Sbjct: 127 ASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQI 186 Query: 318 MMTIIDDLVSVDTLIEDHLCVEPANEYIQSCDIVAFNKI 202 MMTI+DDLVSVD+LIED+ EPANE+IQSCDIVAFNKI Sbjct: 187 MMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI 225
>EF1D_PIMBR (P93447) Elongation factor 1-delta (EF-1-delta) (Elongation factor| 1B-beta) (eEF-1B beta) Length = 225 Score = 158 bits (400), Expect = 1e-38 Identities = 90/159 (56%), Positives = 97/159 (61%) Frame = -1 Query: 678 GVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXDLFXXXXXXXXXXXXXXXXXXX 499 GV+A G GV V S V T DLF Sbjct: 68 GVSAEGCGVTVEGSSVA-TPPVADTKASAAEDDDDDDVDLFGEETEEEKKASEERAAAVK 126 Query: 498 XXXXXXXXXXXSVLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQI 319 SVLLDVKPWDDETDM KLEEAVRSIKM+GLLWGASKL+ VGYGIKKLQI Sbjct: 127 ASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQI 186 Query: 318 MMTIIDDLVSVDTLIEDHLCVEPANEYIQSCDIVAFNKI 202 M+TI+DDLVSVD L+ED+L EPANEYIQSCDIVAFNKI Sbjct: 187 MLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 225
>EF1B_ORYSA (P29545) Elongation factor 1-beta (EF-1-beta) (Elongation factor| 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') Length = 223 Score = 154 bits (390), Expect = 2e-37 Identities = 73/87 (83%), Positives = 82/87 (94%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 VLLDVKPWDDETDM KLEEAVRS++MEGL WGASKL+PVGYGIKKLQIM+TI+DDLVSVD Sbjct: 137 VLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVDDLVSVD 196 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 +LIE+HL EP NE++QSCDIVAFNKI Sbjct: 197 SLIEEHLTEEPINEFVQSCDIVAFNKI 223
>EF1D2_ARATH (Q9SI20) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation| factor 1B-beta 2) (eEF-1B beta 2) Length = 231 Score = 152 bits (384), Expect = 9e-37 Identities = 71/87 (81%), Positives = 80/87 (91%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 VL+D+KPWDDETDM KLEEAVRSI+MEGL WGASKL+PVGYGIKKL IM TI+DDLVS+D Sbjct: 145 VLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVSID 204 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 T+IE+ L VEP NEY+QSCDIVAFNKI Sbjct: 205 TMIEEQLTVEPINEYVQSCDIVAFNKI 231
>EF1D1_ARATH (P48006) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation| factor 1B-beta 1) (eEF-1B beta 1) Length = 231 Score = 152 bits (383), Expect = 1e-36 Identities = 70/87 (80%), Positives = 81/87 (93%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 VL+D+KPWDDETDM KLEEAV+SI+MEGL WGASKL+PVGYGIKKLQI+ TI+DDLVS+D Sbjct: 145 VLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVSID 204 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 T+IE+ L VEP NEY+QSCDIVAFNKI Sbjct: 205 TMIEEQLTVEPINEYVQSCDIVAFNKI 231
>EF1D_BETVU (O81918) Elongation factor 1-delta (EF-1-delta) (Elongation factor| 1B-beta) (eEF-1B beta) Length = 230 Score = 149 bits (376), Expect = 8e-36 Identities = 73/87 (83%), Positives = 79/87 (90%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 VLLDVKPWDDETDM KLEEAVRS++ EGL GASKL+PVGYGIKKL IMMTI+DDLVSVD Sbjct: 144 VLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDDLVSVD 203 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 LIED+L VEP NEY+QSCDIVAFNKI Sbjct: 204 NLIEDYLTVEPINEYVQSCDIVAFNKI 230
>EF1B1_ARATH (Q84WM9) Elongation factor 1-beta 1 (EF-1-beta 1) (Elongation| factor 1B-alpha 1) (eEF-1B alpha 1) (Elongation factor 1-beta' 1) (EF-1-beta' 1) Length = 228 Score = 148 bits (374), Expect = 1e-35 Identities = 73/87 (83%), Positives = 78/87 (89%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 VLL+VKPWDDETDM KLEEAVRS++M GL WGASKL+PVGYGIKKL IMMTI+DDLVSVD Sbjct: 142 VLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVDDLVSVD 201 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 LIEDHL EP NEYIQS DIVAFNKI Sbjct: 202 NLIEDHLTSEPNNEYIQSVDIVAFNKI 228
>EF1B2_ARATH (Q9SCX3) Elongation factor 1-beta 2 (EF-1-beta 2) (Elongation| factor 1B-alpha 2) (eEF-1B alpha 2) (Elongation factor 1-beta' 2) (EF-1-beta' 2) Length = 224 Score = 144 bits (363), Expect = 2e-34 Identities = 70/87 (80%), Positives = 75/87 (86%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 VL+DVKPWDDETDM KLEEAVR ++M GL WGASKL+PVGYGIKKL IM TI+DDLVS D Sbjct: 138 VLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVDDLVSPD 197 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 LIED L EP NEYIQSCDIVAFNKI Sbjct: 198 NLIEDFLTSEPNNEYIQSCDIVAFNKI 224
>EF1B_WHEAT (P29546) Elongation factor 1-beta (EF-1-beta) (Elongation factor| 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') Length = 215 Score = 142 bits (359), Expect = 7e-34 Identities = 70/87 (80%), Positives = 77/87 (88%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 VL+D+KPWDDETDM KLEEAVRS++MEGL WGASKLMPVGYGIKKLQIM+TIIDDL S Sbjct: 131 VLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLTIIDDLAS-- 188 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 T IE+ LC P NEY+QSCDIVAFNKI Sbjct: 189 TPIEEVLCEAPINEYVQSCDIVAFNKI 215
>EF1B_XENTR (Q6DET9) Elongation factor 1-beta (EF-1-beta)| Length = 227 Score = 115 bits (289), Expect = 9e-26 Identities = 57/87 (65%), Positives = 67/87 (77%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +LLDVKPWDDETDM KLEE VRSI+MEGL+WGASKL+PVGYGIKKLQI + DD V D Sbjct: 144 ILLDVKPWDDETDMAKLEECVRSIQMEGLVWGASKLVPVGYGIKKLQIQCVVEDDKVGTD 203 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E+ E +++QS D+ AFNKI Sbjct: 204 VLEENITAFE---DFVQSMDVAAFNKI 227
>EF1B2_BOMMO (P29522) Elongation factor 1-beta'| Length = 221 Score = 114 bits (286), Expect = 2e-25 Identities = 57/87 (65%), Positives = 68/87 (78%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +LLDVKPWDDETDM ++E VR+I+MEGLLWGASKL+PVGYGI KLQIM I DD VSVD Sbjct: 138 ILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVD 197 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E ++ +++QS DI AFNKI Sbjct: 198 LLTEK---IQEFEDFVQSVDIAAFNKI 221
>EF1D_XENLA (P29693) Elongation factor 1-delta (EF-1-delta) (P36)| Length = 265 Score = 113 bits (283), Expect = 5e-25 Identities = 54/87 (62%), Positives = 67/87 (77%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +LLDVKPWDDETDM KLEE VR+++M+GL+WG+SKL+PVGYGIKKLQI + DD V D Sbjct: 182 ILLDVKPWDDETDMAKLEECVRTVQMDGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 241 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E+ + +Y+QS DI AFNKI Sbjct: 242 ILEEE---ITKFEDYVQSVDIAAFNKI 265
>EF1B_DROME (O96827) Probable elongation factor 1-beta (EF-1-beta)| Length = 221 Score = 113 bits (283), Expect = 5e-25 Identities = 57/87 (65%), Positives = 68/87 (78%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 VLLDVKPWDDETDM ++E VR+I+M+GLLWGASKL+PVGYGI KLQIM I DD VS+D Sbjct: 138 VLLDVKPWDDETDMKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKVSID 197 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E +E +++QS DI AFNKI Sbjct: 198 LLQEK---IEEFEDFVQSVDIAAFNKI 221
>EF1B_RABIT (P34826) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 113 bits (283), Expect = 5e-25 Identities = 56/87 (64%), Positives = 66/87 (75%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +LLDVKPWDDETDMVKLEE VRSI+ +GL+WG+SKL+PVGYGIKKLQI + DD V D Sbjct: 141 ILLDVKPWDDETDMVKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 200 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E E +Y+QS D+ AFNKI Sbjct: 201 MLEEQITAFE---DYVQSMDVAAFNKI 224
>EF1B_BOVIN (Q5E983) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 113 bits (282), Expect = 6e-25 Identities = 55/87 (63%), Positives = 66/87 (75%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +LLDVKPWDDETDM KLEE VRSI+ +GL+WG+SKL+PVGYGIKKLQI + DD V D Sbjct: 141 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 200 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E + +EY+QS D+ AFNKI Sbjct: 201 MLEEQ---ITAFDEYVQSMDVAAFNKI 224
>EF1B_MOUSE (O70251) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 112 bits (279), Expect = 1e-24 Identities = 55/87 (63%), Positives = 65/87 (74%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +LLDVKPWDDETDM KLEE VRSI+ +GL+WG+SKL+PVGYGIKKLQI + DD V D Sbjct: 141 ILLDVKPWDDETDMTKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 200 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E E +Y+QS D+ AFNKI Sbjct: 201 MLEEQITAFE---DYVQSMDVAAFNKI 224
>EF1B_HUMAN (P24534) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 112 bits (279), Expect = 1e-24 Identities = 55/87 (63%), Positives = 65/87 (74%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +LLDVKPWDDETDM KLEE VRSI+ +GL+WG+SKL+PVGYGIKKLQI + DD V D Sbjct: 141 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 200 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E E +Y+QS D+ AFNKI Sbjct: 201 MLEEQITAFE---DYVQSMDVAAFNKI 224
>EF1B_CHICK (Q9YGQ1) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 112 bits (279), Expect = 1e-24 Identities = 55/87 (63%), Positives = 65/87 (74%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +LLDVKPWDDETDM KLEE VRSI+ +GL+WG+SKL+PVGYGIKKLQI + DD V D Sbjct: 141 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 200 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E E +Y+QS D+ AFNKI Sbjct: 201 MLEEQITAFE---DYVQSMDVAAFNKI 224
>EF1B_XENLA (P30151) Elongation factor 1-beta (EF-1-beta) (p30)| Length = 226 Score = 111 bits (278), Expect = 2e-24 Identities = 55/87 (63%), Positives = 66/87 (75%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +LLDVKPWDDETDM KLEE +RSI+M+GLLWG+SKL+PVGYGIKKLQI + DD V D Sbjct: 143 ILLDVKPWDDETDMGKLEECLRSIQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 202 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E E +++QS D+ AFNKI Sbjct: 203 VLEEKITAFE---DFVQSMDVAAFNKI 226
>EF1D_ARTSA (P32192) Elongation factor 1-delta (EF-1-delta)| Length = 237 Score = 110 bits (276), Expect = 3e-24 Identities = 53/87 (60%), Positives = 66/87 (75%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +LLD+KPWDDETDM +E VRSI M+GL+WGASKL+PV +G+KKLQI + DD VSVD Sbjct: 154 ILLDIKPWDDETDMGAMEREVRSIAMDGLIWGASKLVPVAFGVKKLQISCVVEDDKVSVD 213 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L+E +E +Y+QS DI AFNKI Sbjct: 214 ELVEK---IEAFEDYVQSVDIAAFNKI 237
>EF1D_RABIT (P53787) Elongation factor 1-delta (EF-1-delta)| Length = 280 Score = 109 bits (272), Expect = 9e-24 Identities = 52/87 (59%), Positives = 66/87 (75%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +LLDVKPWDDETDM +LE VRS++++GL+WGASKL+PVGYGI+KLQI + DD V D Sbjct: 197 ILLDVKPWDDETDMARLEACVRSVQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 256 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E+ + E++QS DI AFNKI Sbjct: 257 LLEEE---ITKFEEHVQSVDIAAFNKI 280
>EF1D_HUMAN (P29692) Elongation factor 1-delta (EF-1-delta) (Antigen NY-CO-4)| Length = 280 Score = 109 bits (272), Expect = 9e-24 Identities = 53/87 (60%), Positives = 66/87 (75%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +LLDVKPWDDETDM +LE VRSI+++GL+WGASKL+PVGYGI+KLQI + DD V D Sbjct: 197 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 256 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E+ + E++QS DI AFNKI Sbjct: 257 LLEEE---ITKFEEHVQSVDIAAFNKI 280
>EF1D_MOUSE (P57776) Elongation factor 1-delta (EF-1-delta)| Length = 280 Score = 107 bits (267), Expect = 3e-23 Identities = 52/87 (59%), Positives = 66/87 (75%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +LLDVKPWDDETDM +LE VRSI+++GL+WGASKL+PVGYGI+KLQI + DD V D Sbjct: 197 ILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 256 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E+ + E++QS DI AF+KI Sbjct: 257 LLEEE---ITKFEEHVQSVDIAAFDKI 280
>EF1B_ARTSA (P12262) Elongation factor 1-beta (EF-1-beta)| Length = 206 Score = 106 bits (264), Expect = 7e-23 Identities = 48/87 (55%), Positives = 67/87 (77%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 V+LD+KPWDDETDM ++E+ VRS++M+GL+WGA+KL+P+ YGIKKL IM + DD VS+D Sbjct: 123 VILDIKPWDDETDMAEMEKLVRSVQMDGLVWGAAKLIPLAYGIKKLSIMCVVEDDKVSID 182 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E + +++QS DI AFNK+ Sbjct: 183 ELQEK---ISEFEDFVQSVDIAAFNKV 206
>EF1B1_CAEEL (P34460) Probable elongation factor 1-beta/1-delta 1| (EF-1-beta/delta 1) Length = 213 Score = 105 bits (263), Expect = 1e-22 Identities = 53/87 (60%), Positives = 68/87 (78%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 V+LDVKPWDDETD+ ++E+ VRSI+M+GL+WG +KL+P+GYGIKKLQI+ I D VSVD Sbjct: 129 VILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVD 188 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 LIE +++QS DIVAFNKI Sbjct: 189 DLIEK--ITGDFEDHVQSVDIVAFNKI 213
>EF1B2_CAEEL (Q9U2H9) Probable elongation factor 1-beta/1-delta 2| (EF-1-beta/delta 2) Length = 262 Score = 105 bits (263), Expect = 1e-22 Identities = 53/87 (60%), Positives = 68/87 (78%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 V+LDVKPWDDETD+ ++E+ VRSI+M+GL+WG +KL+P+GYGIKKLQI+ I D VSVD Sbjct: 178 VILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVD 237 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 LIE +++QS DIVAFNKI Sbjct: 238 DLIEK--ITGDFEDHVQSVDIVAFNKI 262
>EF1B_SCHPO (O74173) Elongation factor 1-beta (EF-1-beta)| Length = 214 Score = 99.4 bits (246), Expect = 9e-21 Identities = 48/87 (55%), Positives = 66/87 (75%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 V LDVKPWDDET M +LE+AVRSI+M+GL+WG SKL+PVG+G+ K QI + + DD VS++ Sbjct: 131 VTLDVKPWDDETPMDELEKAVRSIQMDGLVWGLSKLVPVGFGVNKFQINLVVEDDKVSLE 190 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E+ +E +Y+QS DI A +K+ Sbjct: 191 ALQEE---LEGFEDYVQSTDIAAMSKL 214
>EF1D_DROME (Q9VL18) Probable elongation factor 1-delta (EF-1-delta)| Length = 256 Score = 99.0 bits (245), Expect = 1e-20 Identities = 46/87 (52%), Positives = 62/87 (71%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 ++LDVKPWDDETD+ +E +R I +GLLWGASK +PV +GI+KL I + DD VS+D Sbjct: 173 IILDVKPWDDETDLKVMETEIRKITQDGLLWGASKFVPVAFGIQKLSISCVVEDDKVSID 232 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E+ +E +++QS DI AFNKI Sbjct: 233 WLTEE---IEKLEDFVQSVDIAAFNKI 256
>EF1B_CANAL (P78590) Elongation factor 1-beta (EF-1-beta)| Length = 213 Score = 90.5 bits (223), Expect = 4e-18 Identities = 46/87 (52%), Positives = 61/87 (70%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 V LDVKPWDDETD+ +L V++I+MEGL WGA + +PVG+GIKKLQI + + D LVS+D Sbjct: 130 VTLDVKPWDDETDLDELLTNVKAIEMEGLTWGAHQWIPVGFGIKKLQINLVVEDALVSLD 189 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L VE +++QS DI A K+ Sbjct: 190 DL---QAAVEEDEDHVQSTDIAAMQKL 213
>EF1B_YEAST (P32471) Elongation factor 1-beta (EF-1-beta) (Translation| elongation factor 1B alpha) (Eukaryotic elongation factor 1Balpha) (eEF1Balpha) Length = 205 Score = 88.2 bits (217), Expect = 2e-17 Identities = 42/87 (48%), Positives = 61/87 (70%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 V LDVKPWDDET++ ++ V++I+MEGL WGA + +P+G+GIKKLQI + DD VS+D Sbjct: 122 VTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVSLD 181 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L + +E +++QS DI A K+ Sbjct: 182 DLQQS---IEEDEDHVQSTDIAAMQKL 205
>EF1B_TRYCR (P34827) 25 kDa elongation factor 1-beta (EF-1-beta)| Length = 222 Score = 81.6 bits (200), Expect = 2e-15 Identities = 42/87 (48%), Positives = 57/87 (65%) Frame = -1 Query: 462 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 283 +L DVKPWDD D+ L + ++K +GLLWG KL+PV +G+KKLQ ++ I DD V D Sbjct: 139 ILFDVKPWDDTVDLQALANKLHAVKRDGLLWGDHKLVPVAFGVKKLQQLIVIEDDKVLSD 198 Query: 282 TLIEDHLCVEPANEYIQSCDIVAFNKI 202 L E + E + +QS DIVA+NKI Sbjct: 199 DLEELIMSFE---DEVQSMDIVAWNKI 222
>EF1B_PIG (P29412) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 77.0 bits (188), Expect = 5e-14 Identities = 41/83 (49%), Positives = 48/83 (57%) Frame = -1 Query: 450 VKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIE 271 VKPWDDE M KLEE V SI+ +GL+ L+PVGYGIK DD V D L E Sbjct: 145 VKPWDDEXXMAKLEEXVXSIQADGLVXXXXXLVPVGYGIKXXXXXXXXXDDKVGTDMLEE 204 Query: 270 DHLCVEPANEYIQSCDIVAFNKI 202 E +Y+QS D+ AFNKI Sbjct: 205 QITAFE---DYVQSMDVAAFNKI 224
>EF1B_ARCFU (O29681) Elongation factor 1-beta (EF-1-beta) (aEF-1beta)| Length = 88 Score = 36.6 bits (83), Expect = 0.072 Identities = 18/62 (29%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Frame = -1 Query: 450 VKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSV-DTLI 274 V P D + D+ ++ E +++I+MEG+ S + P+ +G+K + ++M ++ D+ + D I Sbjct: 10 VMPSDVDVDLNEVLEKIKNIQMEGVEIRDSAIQPIAFGLKAI-VLMAVMPDMEGIGDRYI 68 Query: 273 ED 268 E+ Sbjct: 69 EE 70
>SYM_BACTN (Q8A3M1) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 679 Score = 29.6 bits (65), Expect = 8.8 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = -1 Query: 411 EEAVRSIKMEGLLW---GASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIEDHLCVEPANE 241 E+ + + ME W G + L+PVG+ + K +++ I+D V ++ ++ L + ANE Sbjct: 503 EKLRKMLNMESFEWSELGRNDLLPVGHQLNKPELLFEKIEDSV-IEAQVQKLLDTKKANE 561 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,370,095 Number of Sequences: 219361 Number of extensions: 1610612 Number of successful extensions: 4212 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4072 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4188 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
