ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags39n09 |
|---|---|
| Clone Library Name | barley_pub |
>NADD_STRR6 (P65505) Probable nicotinate-nucleotide adenylyltransferase (EC| 2.7.7.18) (Deamido-NAD(+) pyrophosphorylase) (Deamido-NAD(+) diphosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase) Length = 209 Score = 33.5 bits (75), Expect = 0.56 Identities = 26/89 (29%), Positives = 38/89 (42%) Frame = -2 Query: 331 QVLLNPFL*HFQPPSSSHNKSQGEGGENNHLSTGFHLIGKVCIATVEAVCPQLSFTIVAW 152 QVLL P +QPP ++ E L I + I T+E +S+T Sbjct: 55 QVLLMP---EYQPPHVDKKETIPEHHRLKMLELAIEGIDGLVIETIELERKGISYTYDTM 111 Query: 151 ELLQERNHITDI*FACYWNLVFDATSWYR 65 ++L E+N TD F ++V WYR Sbjct: 112 KILTEKNPDTDYYFIIGADMVDYLPKWYR 140
>NADD_STRPN (P65504) Probable nicotinate-nucleotide adenylyltransferase (EC| 2.7.7.18) (Deamido-NAD(+) pyrophosphorylase) (Deamido-NAD(+) diphosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase) Length = 209 Score = 33.5 bits (75), Expect = 0.56 Identities = 26/89 (29%), Positives = 38/89 (42%) Frame = -2 Query: 331 QVLLNPFL*HFQPPSSSHNKSQGEGGENNHLSTGFHLIGKVCIATVEAVCPQLSFTIVAW 152 QVLL P +QPP ++ E L I + I T+E +S+T Sbjct: 55 QVLLMP---EYQPPHVDKKETIPEHHRLKMLELAIEGIDGLVIETIELERKGISYTYDTM 111 Query: 151 ELLQERNHITDI*FACYWNLVFDATSWYR 65 ++L E+N TD F ++V WYR Sbjct: 112 KILTEKNPDTDYYFIIGADMVDYLPKWYR 140
>HRPB_ECOLI (P37024) ATP-dependent RNA helicase hrpB (EC 3.6.1.-)| Length = 809 Score = 32.7 bits (73), Expect = 0.96 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -2 Query: 604 VQAEKKGKRPDHPWTNDPAGRAP 536 VQ E KG+ P H W +DPA AP Sbjct: 779 VQKEMKGRYPKHVWPDDPANTAP 801
>HEMA_IAXIA (P28731) Hemagglutinin precursor [Contains: Hemagglutinin HA1| chain] (Fragment) Length = 344 Score = 29.6 bits (65), Expect = 8.1 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -3 Query: 192 KLCALSSVSPLLLGNCYKRGTIL 124 KLC L ++PL LGNC G IL Sbjct: 57 KLCRLKGIAPLQLGNCSIAGWIL 79
>HEMA_IATAI (P12590) Hemagglutinin precursor [Contains: Hemagglutinin HA1| chain] (Fragment) Length = 344 Score = 29.6 bits (65), Expect = 8.1 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -3 Query: 192 KLCALSSVSPLLLGNCYKRGTIL 124 KLC L ++PL LGNC G IL Sbjct: 57 KLCRLKGIAPLQLGNCSIAGWIL 79
>HEMA_IAHAR (P28730) Hemagglutinin precursor [Contains: Hemagglutinin HA1| chain] (Fragment) Length = 344 Score = 29.6 bits (65), Expect = 8.1 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -3 Query: 192 KLCALSSVSPLLLGNCYKRGTIL 124 KLC L ++PL LGNC G IL Sbjct: 57 KLCRLKGIAPLQLGNCSIAGWIL 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,358,681 Number of Sequences: 219361 Number of extensions: 2110955 Number of successful extensions: 5587 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5416 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5586 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
