>PRIM_STAAC (Q5HFJ8) DNA primase (EC 2.7.7.-)|
          Length = 599

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
 Frame = -3

Query: 604 NLAQNALEVIITR-----------GAYQNGHYSSV----DKAGHHYQCENVEEFAATSDG 470
           NL Q  L V + +           G Y N  +++      K+  HY+   +++  A +D 
Sbjct: 325 NLLQQGLNVFVIQLPSGMDPDEYIGKYGNDAFTAFVKNDKKSFAHYKVSILKDEIAHNDL 384

Query: 469 SEKGYYNKTEHELTVASTS---QVALQRKEPYCRVEPELL 359
           S + Y  +  H++++  +S   Q AL    P+  V PE L
Sbjct: 385 SYERYLKELSHDISLMKSSILQQKALNDVAPFFNVSPEQL 424


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,484,787
Number of Sequences: 219361
Number of extensions: 1983100
Number of successful extensions: 5325
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5324
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)