ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39m22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase ... 358 1e-98
2PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6... 62 2e-09
3PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase p... 48 3e-05
4PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.... 46 1e-04
5PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (... 44 5e-04
6Y2577_MYCTU (Q50644) Hypothetical protein Rv2577/MT2654 39 0.012
7RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigment... 30 5.4

>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)|
           (Fragments)
          Length = 368

 Score =  358 bits (918), Expect = 1e-98
 Identities = 166/166 (100%), Positives = 166/166 (100%)
 Frame = -3

Query: 699 KHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERT 520
           KHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERT
Sbjct: 203 KHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERT 262

Query: 519 CPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGFTKLTA 340
           CPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGFTKLTA
Sbjct: 263 CPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGFTKLTA 322

Query: 339 FNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 202
           FNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS
Sbjct: 323 FNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 368



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>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid|
           phosphatase) (APase6)
          Length = 614

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
 Frame = -3

Query: 690 PWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERTCPL 511
           PW+I  +HR +  S+ S Y       +   RE+ + L  +Y VD    GH+H YER  PL
Sbjct: 457 PWVIVMSHRPMYSSAYSSY-------QLHVREAFEGLLLKYGVDAYLSGHIHWYERLYPL 509

Query: 510 YQSQCVNA-----DKTHYSGTMNGTIFVVAGGGG-----SHLSSYTTAIPKWSIFRDHDY 361
             +  ++      + T+Y+        ++ G  G     S  S         ++     Y
Sbjct: 510 GANGTIDTAAIVNNNTYYAHNGKSITHIINGMAGNIESHSEFSDGEGLTNITALLDKVHY 569

Query: 360 GFTKLTAFNHSSLLFEYMKSSDGKVYDSFTI 268
           GF+KLT FN ++L +E ++  DG V DS T+
Sbjct: 570 GFSKLTIFNETALKWELIRGDDGTVGDSLTL 600



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>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC|
           3.1.3.2) (PAP)
          Length = 469

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
 Frame = -3

Query: 690 PWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERTCPL 511
           PWLI   H    YSS   +  +G       R   ++ + +Y+VD+ + GHVH YER+   
Sbjct: 312 PWLIVLVHSPF-YSSYVHHYMEGETL----RVMYEQWFVKYKVDVVFAGHVHAYERS--- 363

Query: 510 YQSQCVNADKTHYSGTM------NGTIFVVAGGGGSH---LSSYTTAIPKWSIFRDHDYG 358
              +  N      +G        +  I++  G GG+    L+      PK+S FR+  +G
Sbjct: 364 --ERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQPQPKYSAFREASFG 421

Query: 357 FTKLTAFNHSSLLFEYMKSSDG 292
              L   N +   F + ++ DG
Sbjct: 422 HGLLEIKNRTHAYFSWNRNQDG 443



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>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)|
           (Manganese(II) purple acid phosphatase)
          Length = 464

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 11/144 (7%)
 Frame = -3

Query: 690 PWLIFTAHRVLGYSSNSWYADQG-SFEEPEGRESLQKLW-QRYRVDIAYFGHVHNYERTC 517
           PWLI   H       + WY      + E E    + + W  +Y+VD+ + GHVH YER+ 
Sbjct: 306 PWLIVLMH-------SPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERS- 357

Query: 516 PLYQSQCVNADKTHYSG------TMNGTIFVVAGGGGS---HLSSYTTAIPKWSIFRDHD 364
                +  N      +G        +  +++  G GG+     ++ T   PK+S FR+  
Sbjct: 358 ----ERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLATNMTEPQPKYSAFREAS 413

Query: 363 YGFTKLTAFNHSSLLFEYMKSSDG 292
           +G       N +   + + ++ DG
Sbjct: 414 FGHAIFDITNRTHAHYSWHRNQDG 437



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>PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2)|
           (PAP)
          Length = 432

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 5/146 (3%)
 Frame = -3

Query: 690 PWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQKLW-QRYRVDIAYFGHVHNYERTCP 514
           PWLI   H  L  S N        F E E   +  + W  +Y+VD+ + GHVH YER+  
Sbjct: 279 PWLIVLMHSPLYNSYNH------HFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSER 332

Query: 513 LYQ-SQCVNADKTHYSGTMNGTIFVVAGGGGSH---LSSYTTAIPKWSIFRDHDYGFTKL 346
           +   +  +           +  +++  G  G++    S+     P++S FR+  +G    
Sbjct: 333 VSNIAYKITDGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMF 392

Query: 345 TAFNHSSLLFEYMKSSDGKVYDSFTI 268
              N +   F + ++ DG   ++ ++
Sbjct: 393 DIKNRTHAHFSWNRNQDGVAVEADSV 418



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>Y2577_MYCTU (Q50644) Hypothetical protein Rv2577/MT2654|
          Length = 529

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 38/120 (31%)
 Frame = -3

Query: 600 RESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNA-------DKTHYSGTMNGTIFV 442
           R+    L+ +Y+VD+   GH H+YER+ PL  +   +         ++    +  GT+ +
Sbjct: 366 RQEWLPLFDQYQVDLVVCGHEHHYERSHPLRGALGTDTRTPIPVDTRSDLIDSTRGTVHL 425

Query: 441 VAGGGGSHLSSYTTAIPK-----------------------------WSIFRDHD--YGF 355
           V GGGG+   +     P+                             WS FRD D  YGF
Sbjct: 426 VIGGGGTSKPTNALLFPQPRCQVITGVGDFDPAIRRKPSIFVLEDAPWSAFRDRDNPYGF 485



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>RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein|
            homolog)
          Length = 2095

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 2/133 (1%)
 Frame = -3

Query: 531  YERTCPLYQ--SQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYG 358
            + ++ PL Q  S  VN ++  + G    T      G     +   T    WS   + + G
Sbjct: 914  HRKSGPLCQNRSDVVNYNRNGFLGNNLHTTSSKGNGFLMESNKSKTKNDNWSGNTNQETG 973

Query: 357  FTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS*LISSGRH 178
             + +   N   L   + +S +G +YDS+         L  +HD+C  +       S+  H
Sbjct: 974  KSLVAKDNGEELNKHHCESQNGSLYDSY---------LVSLHDNCTLSQTTINEPSTKSH 1024

Query: 177  VNVMEGHPSNKIV 139
            +++ +  P  K+V
Sbjct: 1025 LSIEKSRPEVKLV 1037


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,824,267
Number of Sequences: 219361
Number of extensions: 1543744
Number of successful extensions: 3983
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3972
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7026286028
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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