Clone Information

BLAST Search Result

Clone Name	rbags39m18
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	gb\|AE009947.2\| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	1029	0.0
2	dbj\|AP006714.1\| Saccharum officinarum chloroplast DNA, complete ...	1029	0.0
3	dbj\|AB042240.3\| Triticum aestivum chloroplast DNA, complete genome	950	0.0
4	ref\|XM_481018.1\| Oryza sativa (japonica cultivar-group), mRNA	805	0.0
5	ref\|XM_481019.1\| Oryza sativa (japonica cultivar-group), mRNA	805	0.0
6	ref\|XM_507181.1\| PREDICTED Oryza sativa (japonica cultivar-group...	805	0.0
7	gb\|AY522330.1\| Oryza sativa (japonica cultivar-group) cultivar N...	805	0.0
8	gb\|AY522331.1\| Oryza sativa (japonica cultivar-group) isolate PA...	805	0.0
9	gb\|AY522329.1\| Oryza sativa (indica cultivar-group) isolate 93-1...	805	0.0
10	gb\|AC136521.2\| Oryza sativa (japonica cultivar-group) chromosome...	805	0.0
11	gb\|AC134345.2\| Oryza sativa (jpaonica cultivar-group) chromosome...	805	0.0
12	emb\|X15901.1\|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	805	0.0
13	emb\|BX569685.1\|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	805	0.0
14	gb\|AC122148.1\| Oryza sativa (japonica cultivar-group) chromosome...	805	0.0
15	gb\|AC099402.2\| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	805	0.0
16	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	805	0.0
17	dbj\|AP008216.1\| Oryza sativa (japonica cultivar-group) genomic D...	805	0.0
18	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	805	0.0
19	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	805	0.0
20	dbj\|AP005161.3\| Oryza sativa (japonica cultivar-group) genomic D...	805	0.0
21	dbj\|AK105308.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	805	0.0
22	dbj\|AK071967.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	805	0.0
23	gb\|AE016959.3\| Oryza sativa (japonica cultivar-group) chromosome...	805	0.0
24	dbj\|AP008218.1\| Oryza sativa (japonica cultivar-group) genomic D...	797	0.0
25	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	797	0.0
26	dbj\|AP003280.2\| Oryza sativa (japonica cultivar-group) genomic D...	797	0.0
27	dbj\|AK063122.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	797	0.0
28	gb\|DP000011.1\| Oryza sativa (japonica cultivar-group) chromosome...	797	0.0
29	emb\|AL954853.5\|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb...	797	0.0
30	dbj\|AP006728.1\| Oryza nivara chloroplast DNA, complete genome	797	0.0
31	ref\|XM_479424.1\| Oryza sativa (japonica cultivar-group), mRNA	789	0.0
32	ref\|XM_479423.1\| Oryza sativa (japonica cultivar-group), mRNA	789	0.0
33	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	789	0.0
34	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	789	0.0
35	dbj\|AP005452.5\| Oryza sativa (japonica cultivar-group) genomic D...	789	0.0
36	dbj\|AP003825.3\| Oryza sativa (japonica cultivar-group) genomic D...	789	0.0
37	dbj\|AP004236.3\| Oryza sativa (japonica cultivar-group) genomic D...	789	0.0
38	dbj\|AP003623.3\| Oryza sativa (japonica cultivar-group) genomic D...	789	0.0
39	ref\|XM_450630.1\| Oryza sativa (japonica cultivar-group), mRNA	765	0.0
40	ref\|XM_450631.1\| Oryza sativa (japonica cultivar-group), mRNA	765	0.0
41	ref\|XM_506652.1\| PREDICTED Oryza sativa (japonica cultivar-group...	765	0.0
42	dbj\|AP008215.1\| Oryza sativa (japonica cultivar-group) genomic D...	765	0.0
43	dbj\|AP005675.3\| Oryza sativa (japonica cultivar-group) genomic D...	765	0.0
44	dbj\|AP005422.3\| Oryza sativa (japonica cultivar-group) genomic D...	765	0.0
45	gb\|AC120991.3\| Oryza sativa (japonica cultivar-group) chromosome...	757	0.0
46	gb\|AC104708.2\| Oryza sativa (japonica cultivar-group) chromosome...	757	0.0
47	emb\|X86563.2\|ZMA86563 Zea mays complete chloroplast genome	757	0.0
48	emb\|X06734.1\|CHZMRP14 Maize chloroplast genes for ribosomal prot...	757	0.0
49	gb\|AY928077.1\| Zea mays cultivar B73 chloroplast, complete genome	757	0.0
50	ref\|NM_190859.1\| Oryza sativa (japonica cultivar-group), predic...	618	e-174
51	gb\|AC145383.3\| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genom...	539	e-150
52	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	539	e-150
53	emb\|AL732379.5\|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0...	539	e-150
54	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	539	e-150
55	gb\|AC084748.11\| Oryza sativa chromosome 3 BAC OSJNBa0010I09 geno...	462	e-127
56	gb\|AC084320.10\| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno...	462	e-127
57	gb\|DQ069425.1\| Typha latifolia ribosomal protein L14 (rpl14) gen...	402	e-109
58	gb\|DQ069426.1\| Yucca schidigera ribosomal protein L14 (rpl14) ge...	387	e-104
59	emb\|AL731738.6\|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa...	385	e-103
60	gb\|AC093492.3\| Oryza sativa (japonica cultivar-group) chromosome...	351	2e-93
61	gb\|AC093493.2\| Oryza sativa (japonica cultivar-group) chromosome...	351	2e-93
62	emb\|AJ428413.1\|CFE428413 Calycanthus fertilis var. ferax complet...	349	8e-93
63	gb\|AY916449.1\| Phalaenopsis aphrodite subsp. formosana plastid, ...	323	5e-85
64	emb\|AJ879453.1\| Acorus calamus chloroplast, complete genome	319	7e-84
65	gb\|DQ347958.1\| Solanum bulbocastanum cultivar PT29 chloroplast, ...	307	3e-80
66	gb\|M15176.1\|MZECPPG Zea mays chloroplast Eco x DNA	307	3e-80
67	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	305	1e-79
68	dbj\|AP006523.2\| Oryza sativa (japonica cultivar-group) genomic D...	305	1e-79
69	gb\|DQ069421.1\| Acorus americanus ribosomal protein L14 (rpl14) g...	299	7e-78
70	gb\|DQ383815.1\| Helianthus annuus cultivar line HA383 chloroplast...	299	7e-78
71	gb\|DQ386163.1\| Solanum tuberosum cultivar Desiree chloroplast, c...	299	7e-78
72	gb\|DQ231562.1\| Solanum tuberosum chloroplast, complete genome	299	7e-78
73	gb\|DQ069423.1\| Nuphar advena ribosomal protein L14 (rpl14) gene,...	291	2e-75
74	gb\|AY582139.1\| Panax ginseng chloroplast, complete genome	291	2e-75
75	emb\|AM087200.2\| Lycopersicon esculentum complete chloroplast genome	291	2e-75
76	gb\|DQ347959.1\| Lycopersicon esculentum cultivar LA3023 chloropla...	291	2e-75
77	gb\|DQ424856.1\| Vitis vinifera cultivar Maxxa chloroplast, comple...	289	6e-75
78	gb\|DQ383816.1\| Lactuca sativa cultivar Salinas chloroplast, comp...	287	3e-74
79	emb\|AJ627251.1\| Nymphaea alba chloroplast, complete genome	287	3e-74
80	dbj\|AP007232.1\| Lactuca sativa chloroplast DNA, complete genome	287	3e-74
81	emb\|AJ970307.1\| Cucumis sativus chloroplast complete genome	285	1e-73
82	gb\|AF441853.1\|AF441853 Cucumis sativus RBL1 mRNA, complete cds; ...	285	1e-73
83	gb\|DQ119058.1\| Cucumis sativus cultivar Baekmibaekdadagi plastid...	285	1e-73
84	dbj\|AB240139.1\| Nicotiana tomentosiformis chloroplast DNA, compl...	283	4e-73
85	emb\|Z00044.2\|CHNTXX Nicotiana tabacum chloroplast genome DNA	276	1e-70
86	emb\|AJ400848.1\|SOL400848 Spinacia oleracea complete chloroplast ...	276	1e-70
87	emb\|AJ316582.1\|ABE316582 Atropa belladonna complete chloroplast ...	276	1e-70
88	dbj\|AB237912.1\| Nicotiana sylvestris chloroplast DNA, complete s...	276	1e-70
89	gb\|DQ345959.1\| Gossypium hirsutum cultivar coker 310 FR chloropl...	274	4e-70
90	dbj\|AP005707.3\| Oryza sativa (japonica cultivar-group) genomic D...	262	1e-66
91	dbj\|AP005683.2\| Oryza sativa (japonica cultivar-group) genomic D...	262	1e-66
92	emb\|X13336.1\|CHSORP Spinacia oleracea plastid genes rps3, rps19,...	254	4e-64
93	dbj\|AP000423.1\| Arabidopsis thaliana chloroplast genomic DNA, co...	250	6e-63
94	dbj\|AP004556.3\| Oryza sativa (japonica cultivar-group) genomic D...	242	1e-60
95	dbj\|AP005415.2\| Oryza sativa (japonica cultivar-group) genomic D...	242	1e-60
96	gb\|DQ069424.1\| Ranunculus macranthus ribosomal protein L14 (rpl1...	238	2e-59
97	emb\|AJ506156.2\|ATR506156 Amborella trichopoda chloroplast genomi...	234	3e-58
98	emb\|AJ271079.2\|OEL271079 Oenothera elata subsp. hookeri chloropl...	234	3e-58
99	gb\|AY780259.1\| Eucalyptus globulus subsp. globulus chloroplast, ...	218	2e-53
100	gb\|DQ231548.1\| Brassica rapa subsp. pekinensis chloroplast sequence	216	8e-53
101	dbj\|AP002983.1\| Lotus japonicus chloroplast DNA, complete genome	212	1e-51
102	dbj\|AP008982.1\| Triticum aestivum mitochondrial DNA, complete ge...	210	5e-51
103	dbj\|AP006174.3\| Oryza sativa (japonica cultivar-group) genomic D...	186	7e-44
104	dbj\|AP006067.3\| Oryza sativa (japonica cultivar-group) genomic D...	186	7e-44
105	dbj\|AP005389.3\| Oryza sativa (japonica cultivar-group) genomic D...	186	7e-44
106	dbj\|AP005298.3\| Oryza sativa (japonica cultivar-group) genomic D...	186	7e-44
107	dbj\|AB077365.1\| Iris dichotoma plastid DNA, intron region	180	4e-42
108	gb\|AC135498.3\| Oryza sativa (japonica cultivar-group) chromosome...	176	7e-41
109	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	176	7e-41
110	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	176	7e-41
111	gb\|DQ069420.1\| Yucca schidigera ribosomal protein L16 (rpl16) ge...	172	1e-39
112	gb\|DQ167399.1\| Oryza sativa (indica cultivar-group) isolate 93-1...	170	4e-39
113	gb\|DQ167807.1\| Oryza sativa (japonica cultivar-group) isolate PA...	170	4e-39
114	gb\|DQ167400.1\| Oryza sativa (japonica cultivar-group) cultivar N...	170	4e-39
115	dbj\|BA000029.3\| Oryza sativa (japonica cultivar-group) mitochond...	170	4e-39
116	gb\|AC137998.2\| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genom...	163	1e-36
117	gb\|DQ069419.1\| Typha latifolia ribosomal protein L16 (rpl16) gen...	159	2e-35
118	gb\|AF229187.1\|AF229187 Oryza sativa subsp. japonica BAC clone nb...	155	2e-34
119	dbj\|D13105.1\|RICMT09 Oryza sativa (japonica cultivar-group) mito...	155	2e-34
120	gb\|DQ069415.1\| Acorus americanus ribosomal protein L16 (rpl16) g...	149	2e-32
121	dbj\|AB077366.1\| Iris bungei plastid DNA, intron region	149	2e-32
122	dbj\|AP003768.3\| Oryza sativa (japonica cultivar-group) genomic D...	145	2e-31
123	gb\|AF536225.1\| Vigna angularis chloroplast S10B operon, partial ...	141	4e-30
124	dbj\|AP003861.2\| Oryza sativa (japonica cultivar-group) genomic D...	141	4e-30
125	dbj\|AB096925.1\| Papaver somniferum chloroplast rpl16 gene for ri...	141	4e-30
126	dbj\|AB096924.1\| Papaver setigerum chloroplast rpl16 gene for rib...	141	4e-30
127	gb\|AC093544.8\| Medicago truncatula chloroplast, complete genome,...	139	1e-29
128	dbj\|AB096923.1\| Papaver rhoeas chloroplast rpl16 gene for riboso...	133	9e-28
129	dbj\|AB096922.1\| Papaver pseudo-orientale chloroplast rpl16 gene ...	133	9e-28
130	dbj\|AB096921.1\| Papaver orientale chloroplast rpl16 gene for rib...	133	9e-28
131	dbj\|AB077335.1\| Allium altaicum plastid DNA, intron region	129	1e-26
132	gb\|DQ069417.1\| Nuphar advena ribosomal protein L16 (rpl16) gene,...	127	6e-26
133	dbj\|AB096920.1\| Papaver bracteatum chloroplast rpl16 gene for ri...	125	2e-25
134	gb\|DQ317523.1\| Glycine max cultivar PI 437654 chloroplast, compl...	125	2e-25
135	dbj\|D17510.1\|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	123	9e-25
136	dbj\|AB199893.1\| Angelica acutiloba var. iwatensis chloroplast rp...	121	3e-24
137	dbj\|AB199892.1\| Angelica acutiloba var. sugiyamae chloroplast rp...	121	3e-24
138	dbj\|AB199891.1\| Angelica acutiloba chloroplast rpl16 gene for ri...	121	3e-24
139	emb\|X03834.1\|CHSOL16 Spirodela oligorhiza chloroplast gene for r...	121	3e-24
140	emb\|X68048.1\|CHPVHISG Phaseolus vulgaris chloroplast DNA for tRN...	117	5e-23
141	gb\|AC133862.6\| Medicago truncatula clone mth2-30d7, complete seq...	115	2e-22
142	gb\|AC124957.18\| Medicago truncatula clone mth2-15k14, complete s...	115	2e-22
143	gb\|AY228468.1\| Pinus Koraiensis chloroplast, complete genome	115	2e-22
144	dbj\|AB077337.1\| Saussurea involucrata plastid DNA, intron region	109	1e-20
145	gb\|DQ069418.1\| Ranunculus macranthus ribosomal protein L16 (rpl1...	98	5e-17
146	dbj\|AB201297.1\| Prunus campanulata chloroplast rpl16 gene for ri...	98	5e-17
147	dbj\|AB201296.1\| Prunus pseudocerasus chloroplast rpl16 gene for ...	98	5e-17
148	dbj\|AB201295.1\| Prunus maximowiczii chloroplast rpl16 gene for r...	98	5e-17
149	dbj\|AB201294.1\| Prunus subhirtella var. ascendens chloroplast rp...	98	5e-17
150	dbj\|AB201293.1\| Prunus apetala chloroplast rpl16 gene for riboso...	98	5e-17
151	dbj\|AB201292.1\| Prunus apetala chloroplast rpl16 gene for riboso...	98	5e-17
152	dbj\|AB112068.1\| Scutellaria baicalensis chloroplast rpl16 gene f...	98	5e-17
153	gb\|M60180.1\|OBECPRPB O.ammophila ribosomal protein L14 and S8 (r...	98	5e-17
154	gb\|AY958086.1\| Zygnema circumcarinatum chloroplast, complete genome	92	3e-15
155	dbj\|AB077333.1\| Ferula feruloides plastid DNA, intron region	92	3e-15
156	dbj\|AB112072.1\| Scutellaria lateriflora chloroplast rpl16 gene f...	90	1e-14
157	dbj\|AB112071.1\| Scutellaria indica chloroplast rpl16 gene for ro...	90	1e-14
158	dbj\|AB112069.1\| Scutellaria galericulata chloroplast rpl16 gene ...	90	1e-14
159	dbj\|AB112067.1\| Scutellaria altissima chloroplast rpl16 gene for...	90	1e-14
160	gb\|DQ069416.1\| Ginkgo biloba ribosomal protein L16 (rpl16) gene,...	88	5e-14
161	emb\|X04465.1\|CHMPXX Marchantia polymorpha chloroplast genome DNA	88	5e-14
162	dbj\|AP003281.3\| Oryza sativa (japonica cultivar-group) genomic D...	88	5e-14
163	gb\|AC011806.1\|AC011806 Genomic Sequence For Oryza sativa Clone 1...	88	5e-14
164	dbj\|AP003236.3\| Oryza sativa (japonica cultivar-group) genomic D...	88	5e-14
165	dbj\|AB116628.1\| Cistanche deserticola chloroplast rpl16 gene for...	88	5e-14
166	dbj\|AB116625.1\| Cistanche deserticola chloroplast rpl16 gene for...	88	5e-14
167	dbj\|AB116624.1\| Cistanche deserticola chloroplast rpl16 gene for...	88	5e-14
168	dbj\|AB062414.1\| Cistanche salsa chloroplast rpl16 gene for ribos...	88	5e-14
169	dbj\|AB062413.1\| Cistanche salsa chloroplast rpl16 gene for ribos...	88	5e-14
170	dbj\|AB062412.1\| Cistanche salsa chloroplast rpl16 gene for ribos...	88	5e-14
171	dbj\|AB062411.1\| Cistanche deserticola chloroplast rpl16 gene for...	88	5e-14
172	emb\|AL663020.4\|OSJN00220 Oryza sativa genomic DNA, chromosome 4,...	86	2e-13
173	dbj\|AB077439.1\| Sophora alopecuroides plastid DNA, intron region	86	2e-13
174	dbj\|AP005672.1\| Physcomitrella patens subsp. patens chloroplast ...	86	2e-13
175	dbj\|AB062415.1\| Cistanche tubulosa chloroplast rpl16 gene for ri...	86	2e-13
176	dbj\|AB116627.1\| Cistanche sinensis chloroplast rpl16 gene for ri...	84	7e-13
177	dbj\|AB116626.1\| Cistanche sinensis chloroplast rpl16 gene for ri...	84	7e-13
178	dbj\|AB087470.1\| Anthoceros formosae chloroplast rpl16 mRNA for r...	84	7e-13
179	dbj\|AB112070.1\| Scutellaria incana chloroplast rpl16 gene for ri...	82	3e-12
180	dbj\|AB087469.1\| Anthoceros formosae chloroplast rpl14 mRNA for r...	82	3e-12
181	dbj\|AB086179.1\| Anthoceros formosae chloroplast DNA, complete ge...	82	3e-12
182	gb\|M80799.1\|VIRCPRPL Vigna unguiculata chloroplast ribosomal pro...	82	3e-12
183	gb\|M60179.1\|OBECPRPA O.ammophila ribosomal protein L14 and L16 (...	82	3e-12
184	gb\|AY660566.1\| Huperzia lucidula chloroplast, complete genome	80	1e-11
185	emb\|AL662985.3\|OSJN00189 Oryza sativa genomic DNA, chromosome 4,...	78	5e-11
186	dbj\|AP004038.2\| Oryza sativa (japonica cultivar-group) genomic D...	76	2e-10
187	dbj\|AP004638.1\| Psilotum nudum chloroplast DNA, complete genome	74	7e-10
188	dbj\|AP003418.2\| Oryza sativa (japonica cultivar-group) genomic D...	70	1e-08
189	gb\|DQ069422.1\| Ginkgo biloba ribosomal protein L14 (rpl14) gene,...	68	4e-08
190	dbj\|AB077440.1\| Incarvillea potaninii plastid DNA, intron region	68	4e-08
191	dbj\|AB077334.1\| Zygophyllum pterocarpum plastid DNA, intron region	68	4e-08
192	gb\|DQ396875.1\| Scenedesmus obliquus strain UTEX 393 chloroplast,...	62	3e-06
193	dbj\|AP004159.3\| Oryza sativa (japonica cultivar-group) genomic D...	62	3e-06
194	gb\|DQ291132.1\| Oltmannsiellopsis viridis chloroplast, complete g...	58	4e-05
195	gb\|AY178864.1\| Adiantum capillus-veneris chloroplast, complete g...	56	2e-04
196	tpg\|BK000554.2\| TPA: TPA_inf: Chlamydomonas reinhardtii chloropl...	56	2e-04
197	emb\|X14062.1\|CHCRL14 Chlamydomonas reinhardtii plasti gene for r...	56	2e-04
198	dbj\|AB197035.2\| Selaginella uncinata chloroplast DNA, complete g...	54	7e-04
199	gb\|AY224188.1\| Medicago truncatula adenosylhomocysteinase (AHC1)...	54	7e-04
200	gb\|M30487.1\|CPACYRP Cyanophora paradoxa ribosomal protein l22 (r...	54	7e-04
201	emb\|AL928780.5\|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa...	54	7e-04
202	gb\|U30821.1\|CPU30821 Cyanophora paradoxa cyanelle, complete genome	54	7e-04
203	gb\|AE001437.1\| Clostridium acetobutylicum ATCC 824, complete genome	52	0.003
204	gb\|AF050665.1\|AF050665 Spirogyra maxima tRNA-Ile gene, complete ...	52	0.003
205	gb\|CP000117.1\| Anabaena variabilis ATCC 29413 chromosome, comple...	50	0.010
206	gb\|AC144759.11\| Medicago truncatula clone mth2-15b21, complete s...	50	0.010
207	gb\|AC123596.13\| Medicago truncatula clone mth1-17n5, complete se...	50	0.010
208	dbj\|BA000019.2\| Nostoc sp. PCC 7120 DNA, complete genome	50	0.010
209	emb\|CT025839.2\| Medicago truncatula chromosome 5 clone mth4-19c2...	50	0.010
210	gb\|AY958085.1\| Staurastrum punctulatum chloroplast, complete genome	48	0.041
211	gb\|AC135558.6\| Oryza sativa (japonica cultivar-group) chromosome...	48	0.041
212	ref\|NM_128441.3\| Arabidopsis thaliana structural constituent of ...	46	0.16
213	emb\|AL359081.10\| Human DNA sequence from clone RP11-541F9 on chr...	46	0.16
214	gb\|AC005727.3\| Arabidopsis thaliana chromosome 2 clone F8N16 map...	46	0.16
215	gb\|AY219111.2\| Arabidopsis thaliana hypothetical protein (At2g28...	46	0.16
216	dbj\|AP000606.1\| Arabidopsis thaliana genomic DNA, chromosome 3, ...	46	0.16
217	dbj\|AB028608.1\| Arabidopsis thaliana genomic DNA, chromosome 3, ...	46	0.16
218	gb\|AC157473.1\| Medicago truncatula chromosome 7 BAC clone mte1-1...	46	0.16
219	gb\|M81884.1\|EPFCPCG Epifagus virginiana chloroplast, complete ge...	44	0.64
220	gb\|AC132335.3\| Mus musculus BAC clone RP24-230C24 from chromosom...	44	0.64
221	dbj\|AB025638.1\| Arabidopsis thaliana genomic DNA, chromosome 5, ...	44	0.64
222	gb\|AC166165.3\| Mus musculus BAC clone RP23-381I17 from chromosom...	44	0.64
223	gb\|CP000109.1\| Thiomicrospira crunogena XCL-2, complete genome	42	2.5
224	emb\|CT009479.4\| M.truncatula DNA sequence from clone MTH2-164E3 ...	42	2.5
225	gb\|AC132083.3\| Mus musculus BAC clone RP24-540G23 from chromosom...	42	2.5
226	emb\|CR753838.10\| Zebrafish DNA sequence from clone DKEY-189H5 in...	42	2.5
227	gb\|AY115835.1\| Pinus krempfii ribosomal protein L16 (rpl16) gene...	42	2.5
228	gb\|AY115834.1\| Pinus squamata ribosomal protein L16 (rpl16) gene...	42	2.5
229	gb\|AY115833.1\| Pinus gerardiana ribosomal protein L16 (rpl16) ge...	42	2.5
230	gb\|AY115832.1\| Pinus bungeana ribosomal protein L16 (rpl16) gene...	42	2.5
231	gb\|AY115831.1\| Pinus balfouriana specimen-voucher Kew1969.10666 ...	42	2.5
232	gb\|AY115830.1\| Pinus balfouriana specimen-voucher Olinecm11 Cali...	42	2.5
233	gb\|AY115829.1\| Pinus longaeva specimen-voucher Kew1972.6349 Cali...	42	2.5
234	gb\|AY115828.1\| Pinus longaeva specimen-voucher DSG3099 Californi...	42	2.5
235	gb\|AY115827.1\| Pinus aristata specimen-voucher Kew1992.747 Color...	42	2.5
236	gb\|AY115826.1\| Pinus aristata specimen-voucher DSG3299 Colorado ...	42	2.5
237	gb\|AY115825.1\| Pinus nelsonii ribosomal protein L16 (rpl16) gene...	42	2.5
238	gb\|AY115824.1\| Pinus rzedowskii ribosomal protein L16 (rpl16) ge...	42	2.5
239	gb\|AY115823.1\| Pinus pinceana specimen-voucher DSG8899 Coahuila ...	42	2.5
240	gb\|AY115822.1\| Pinus pinceana specimen-voucher DSG3998 Hidalgo r...	42	2.5
241	gb\|AY115821.1\| Pinus maximartinezii ribosomal protein L16 (rpl16...	42	2.5
242	gb\|AY115820.1\| Pinus quadrifolia ribosomal protein L16 (rpl16) g...	42	2.5
243	gb\|AY115819.1\| Pinus juarezensis specimen-voucher DSG1099 Baja C...	42	2.5
244	gb\|AY115818.1\| Pinus juarezensis specimen-voucher DSG1499 Baja C...	42	2.5
245	gb\|AY115817.1\| Pinus monophylla specimen-voucher DSG2399 Califor...	42	2.5
246	gb\|AY115816.1\| Pinus monophylla specimen-voucher Kew1986.5767 Ca...	42	2.5
247	gb\|AY115815.1\| Pinus discolor ribosomal protein L16 (rpl16) gene...	42	2.5
248	gb\|AY115814.1\| Pinus johannis specimen-voucher DSG2001 San Luis ...	42	2.5
249	gb\|AY115813.1\| Pinus johannis specimen-voucher DSG8199 Zacatecas...	42	2.5
250	gb\|AY115812.1\| Pinus catarinae specimen-voucher DSG1301 Nuevo Le...	42	2.5
251	gb\|AY115811.1\| Pinus catarinae specimen-voucher DSG6899 Chapingo...	42	2.5
252	gb\|AY115810.1\| Pinus remota specimen-voucher DSG801 Coahuila rib...	42	2.5
253	gb\|AY115809.1\| Pinus remota specimen-voucher DSG19298 Coahuila r...	42	2.5
254	gb\|AY115808.1\| Pinus edulis specimen-voucher Kew1995.3959 Colora...	42	2.5
255	gb\|AY115807.1\| Pinus edulis specimen-voucher DSG3399 Colorado ri...	42	2.5
256	gb\|AY115806.1\| Pinus culminicola ribosomal protein L16 (rpl16) g...	42	2.5
257	gb\|AY115805.1\| Pinus cembroides subsp. lagunae ribosomal protein...	42	2.5
258	gb\|AY115804.1\| Pinus cembroides subsp. orizabensis ribosomal pro...	42	2.5
259	gb\|AY115803.1\| Pinus cembroides ribosomal protein L16 (rpl16) ge...	42	2.5
260	emb\|AL606489.26\| Human DNA sequence from clone RP11-739N20 on ch...	42	2.5
261	ref\|XM_503361.1\| Yarrowia lipolytica CLIB122, YALI0E00154g predi...	42	2.5
262	emb\|AL359821.11\| Human DNA sequence from clone RP11-175G14 on ch...	42	2.5
263	emb\|AL355355.25\| Human DNA sequence from clone RP11-730A19 on ch...	42	2.5
264	emb\|AL122003.17\|HSJ659I19 Human DNA sequence from clone RP4-659I...	42	2.5
265	emb\|AL162752.2\|NMA1Z2491 Neisseria meningitidis serogroup A stra...	42	2.5
266	gb\|AC084817.5\| Oryza sativa (japonica cultivar-group) chromosome...	42	2.5
267	gb\|AY835431.1\| Pseudendoclonium akinetum chloroplast, complete g...	42	2.5
268	gb\|AC025821.7\| Homo sapiens BAC clone RP11-472F4 from 4, complet...	42	2.5
269	dbj\|AK034773.1\| Mus musculus 12 days embryo embryonic body betwe...	42	2.5
270	gb\|AE002098.2\| Neisseria meningitidis MC58, complete genome	42	2.5
271	gb\|AC109358.3\| Homo sapiens BAC clone RP11-648D16 from 2, comple...	42	2.5
272	gb\|AC073885.5\| Homo sapiens BAC clone RP11-70L16 from 2, complet...	42	2.5
273	gb\|AF283525.1\|AF283519S7 Homo sapiens FIP2 gene, exons 11, 12 an...	42	2.5
274	dbj\|AK120872.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.5
275	gb\|AE004969.1\| Neisseria gonorrhoeae FA 1090, complete genome	42	2.5
276	emb\|BX322606.6\| Zebrafish DNA sequence from clone DKEY-40F12, co...	42	2.5
277	gb\|U38804.1\|PPU38804 Porphyra purpurea chloroplast, complete genome	42	2.5
278	emb\|CR382131.1\| Yarrowia lipolytica chromosome E of strain CLIB ...	42	2.5
279	gb\|AC165159.2\| Mus musculus BAC clone RP23-234N1 from chromosome...	42	2.5

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score = 1029 bits (519), Expect = 0.0
 Identities = 674/726 (92%), Gaps = 3/726 (0%)
 Strand = Plus / Plus

                                                                       
Query: 9   tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
           ||||||| | ||||||||||||||| ||  |||||||||||| || ||| ||||||||||
Sbjct: 81  tatacgtgagacacaatctactaatttt--ttctttgatctatatctcgtctactagtat 138

                                                                       
Query: 69  ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
           ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| ||
Sbjct: 139 ttataatacttcaggagctaatgaaactattttagtataattcaattctcttaattcttc 198

                                                                       
Query: 129 ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
           ||||| ||||||||||||||||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 199 ggcaaccgcgccaaaaactcgagttccttttggatttcctttttgatcaatgataactgc 258

                                                                       
Query: 189 agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
            ||||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||
Sbjct: 259 tgcattgtcatcatagcgtattattataccgtcgtcgcctttgaattctttacgtgtacg 318

                                                                       
Query: 249 tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 319 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 378

                                                                       
Query: 309 gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
           ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 379 gattacagcaataataacatcaccaatacgagcatatcgctgattaccagcggctcctat 438

                                                                       
Query: 369 gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
           ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 439 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 498

                                                                       
Query: 429 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 499 aggttgaatcatattattttgatttccatttgttatttcaatgcaaaaggatgaaagaaa 558

                                                                       
Query: 489 tattgtctttccagaaagaaaaaccgggcannnnnnnncttccatacccct-tttagggt 547
           ||||||||||||||||||||||||| ||          |||| |||| ||| ||| ||||
Sbjct: 559 tattgtctttccagaaagaaaaaccaggggttttttatcttcaatactcctttttggggt 618

                                                                       
Query: 548 tctatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggaga 607
           |||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 619 tctatatctctaatcgaagaaattgacttcgtatgggcattttactggcagctatagaga 678

                                                                       
Query: 608 tagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggtt 667
           |||||||||||||||||||||| |||||||| | ||||||||||||||| ||||||||||
Sbjct: 679 tagctgctctagctacagtttcggatactccgctcatttcataaagtattcgacctggtt 738

                                                                       
Query: 668 taacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgg 727
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 739 taacaacggctacccaatattcgggggatccctttcccgagcccatacgtgtttctgtgg 798

                 
Query: 728 gtctta 733
           ||||||
Sbjct: 799 gtctta 804

to top

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score = 1029 bits (519), Expect = 0.0
 Identities = 674/726 (92%), Gaps = 3/726 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| | ||||||||||||||| ||  |||||||||||| || ||| ||||||||||
Sbjct: 79638 tatacgtgagacacaatctactaatttt--ttctttgatctatatctcgtctactagtat 79695

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| ||
Sbjct: 79696 ttataatacttcaggagctaatgaaactattttagtataattcaattctcttaattcttc 79755

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||||| ||||||||||||||||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 79756 ggcaaccgcgccaaaaactcgagttccttttggatttcctttttgatcaatgataactgc 79815

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              ||||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||
Sbjct: 79816 tgcattgtcatcatagcgtattattataccgtcgtcgcctttgaattctttacgtgtacg 79875

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 79876 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 79935

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 79936 gattacagcaataataacatcaccaatacgagcatatcgctgattaccagcggctcctat 79995

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 79996 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 80055

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 80056 aggttgaatcatattattttgatttccatttgttatttcaatgcaaaaggatgaaagaaa 80115

                                                                         
Query: 489   tattgtctttccagaaagaaaaaccgggcannnnnnnncttccatacccct-tttagggt 547
             ||||||||||||||||||||||||| ||          |||| |||| ||| ||| ||||
Sbjct: 80116 tattgtctttccagaaagaaaaaccaggggttttttatcttcaatactcctttttggggt 80175

                                                                         
Query: 548   tctatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggaga 607
             |||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 80176 tctatatctctaatcgaagaaattgacttcgtatgggcattttactggcagctatagaga 80235

                                                                         
Query: 608   tagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggtt 667
             |||||||||||||||||||||| |||||||| | ||||||||||||||| ||||||||||
Sbjct: 80236 tagctgctctagctacagtttcggatactccgctcatttcataaagtattcgacctggtt 80295

                                                                         
Query: 668   taacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgg 727
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 80296 taacaacggctacccaatattcgggggatccctttcccgagcccatacgtgtttctgtgg 80355

                   
Query: 728   gtctta 733
             ||||||
Sbjct: 80356 gtctta 80361

to top

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  950 bits (479), Expect = 0.0
 Identities = 511/519 (98%), Gaps = 2/519 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     tttaaaac-tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcc 59
             |||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 76966 tttaaaacatatacgtaaaacacaatctactaa-attaattctttgatctcaatttcgcc 77024

                                                                         
Query: 60    tactagtatttataatacttcaggagctaatgaaactattttggtaaaattcaattctct 119
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 77025 tactagtatttataatacttcaggagctaatgaaactattttggtaaaattcaatcctct 77084

                                                                         
Query: 120   caattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaat 179
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 77085 caattcctcggcaatcgcgccaaaaactcgagttccttttggattgcctttttgatcaat 77144

                                                                         
Query: 180   tataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattcttt 239
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 77145 tataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaactcttt 77204

                                                                         
Query: 240   acatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaa 299
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77205 acatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaa 77264

                                                                         
Query: 300   tgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagc 359
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77265 tgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagc 77324

                                                                         
Query: 360   agctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaa 419
             ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 77325 agctcctatgactcgaatacacatcaattttcgagctccactattatcggctacatttaa 77384

                                                                         
Query: 420   aagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaagga 479
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77385 aagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaagga 77444

                                                    
Query: 480   tgaaagaaatattgtctttccagaaagaaaaaccgggca 518
             |||||||||||||||||||||||||||||||||||||||
Sbjct: 77445 tgaaagaaatattgtctttccagaaagaaaaaccgggca 77483



 Score =  381 bits (192), Expect = e-102
 Identities = 204/208 (98%)
 Strand = Plus / Plus

                                                                         
Query: 527   cttccataccccttttagggttctatatctctaatcgaataaattgacttcgtatgggca 586
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77496 cttccataccccttttagggttctatatctctaatcgaataaattgacttcgtatgggca 77555

                                                                         
Query: 587   ttttactggccgctatggagatagctgctctagctacagtttcagatactccccccattt 646
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77556 ttttactggcagctatggagatagctgctctagctacagtttcagatactccccccattt 77615

                                                                         
Query: 647   cataaagtatacgacctggtttaacaacggctacccaatattcgggggacccctttcccg 706
             |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 77616 cataaagtatacgaccaggtttaacaacggatacccaatattcgggggacccctttcccg 77675

                                         
Query: 707   agcccatacgtgtttccgtgggtcttag 734
             |||||||||||||||| |||||||||||
Sbjct: 77676 agcccatacgtgtttctgtgggtcttag 77703

to top

>ref|XM_481018.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 793

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                       
Query: 9   tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
           ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 780 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 723

                                                                       
Query: 69  ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 722 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 663

                                                                       
Query: 129 ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
           ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 662 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 603

                                                                       
Query: 189 agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
            |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 602 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 543

                                                                       
Query: 249 tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 542 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 483

                                                                       
Query: 309 gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 482 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 423

                                                                       
Query: 369 gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
           ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 422 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 363

                                                                       
Query: 429 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 303

                                    
Query: 489 tattgtctttccagaaagaaaaacc 513
           |||||||||||||||||||| ||||
Sbjct: 302 tattgtctttccagaaagaagaacc 278



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                       
Query: 550 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 239 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 180

                                                                       
Query: 610 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
           ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 179 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 120

                                                                       
Query: 670 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 119 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 60

               
Query: 730 ctta 733
           ||||
Sbjct: 59  ctta 56

to top

>ref|XM_481019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2157

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
            ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 1522 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 1465

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1464 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 1405

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
            ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1404 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 1345

                                                                        
Query: 189  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1344 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 1285

                                                                        
Query: 249  tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1284 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 1225

                                                                        
Query: 309  gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1224 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 1165

                                                                        
Query: 369  gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
            ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1164 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 1105

                                                                        
Query: 429  aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 1045

                                     
Query: 489  tattgtctttccagaaagaaaaacc 513
            |||||||||||||||||||| ||||
Sbjct: 1044 tattgtctttccagaaagaagaacc 1020



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                       
Query: 550 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 981 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 922

                                                                       
Query: 610 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
           ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 921 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 862

                                                                       
Query: 670 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 861 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 802

               
Query: 730 ctta 733
           ||||
Sbjct: 801 ctta 798

to top

>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24
            mRNA
          Length = 2157

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
            ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 1522 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 1465

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1464 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 1405

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
            ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1404 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 1345

                                                                        
Query: 189  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1344 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 1285

                                                                        
Query: 249  tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1284 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 1225

                                                                        
Query: 309  gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1224 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 1165

                                                                        
Query: 369  gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
            ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1164 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 1105

                                                                        
Query: 429  aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 1045

                                     
Query: 489  tattgtctttccagaaagaaaaacc 513
            |||||||||||||||||||| ||||
Sbjct: 1044 tattgtctttccagaaagaagaacc 1020



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                       
Query: 550 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 981 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 922

                                                                       
Query: 610 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
           ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 921 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 862

                                                                       
Query: 670 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 861 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 802

               
Query: 730 ctta 733
           ||||
Sbjct: 801 ctta 798

to top

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 77203 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 77260

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 77261 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 77320

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 77321 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 77380

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 77381 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 77440

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 77441 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 77500

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 77501 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 77560

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 77561 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 77620

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77621 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 77680

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||| ||||
Sbjct: 77681 tattgtctttccagaaagaagaacc 77705



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77743 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77802

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 77803 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 77862

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 77863 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 77922

                 
Query: 730   ctta 733
             ||||
Sbjct: 77923 ctta 77926

to top

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 77203 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 77260

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 77261 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 77320

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 77321 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 77380

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 77381 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 77440

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 77441 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 77500

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 77501 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 77560

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 77561 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 77620

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77621 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 77680

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||| ||||
Sbjct: 77681 tattgtctttccagaaagaagaacc 77705



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77743 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77802

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 77803 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 77862

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 77863 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 77922

                 
Query: 730   ctta 733
             ||||
Sbjct: 77923 ctta 77926

to top

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 77144 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 77201

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 77202 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 77261

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 77262 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 77321

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 77322 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 77381

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 77382 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 77441

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 77442 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 77501

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 77502 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 77561

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77562 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 77621

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||| ||||
Sbjct: 77622 tattgtctttccagaaagaagaacc 77646



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77687 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77746

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 77747 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 77806

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 77807 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 77866

                 
Query: 730   ctta 733
             ||||
Sbjct: 77867 ctta 77870

to top

>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0034M22, complete sequence
          Length = 149435

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 53214 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 53271

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 53272 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 53331

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 53332 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 53391

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 53392 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 53451

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 53452 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 53511

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 53512 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 53571

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 53572 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 53631

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53632 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 53691

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||| ||||
Sbjct: 53692 tattgtctttccagaaagaagaacc 53716



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 53754 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 53813

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 53814 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 53873

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 53874 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 53933

                 
Query: 730   ctta 733
             ||||
Sbjct: 53934 ctta 53937

to top

>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07,
              complete sequence
          Length = 136858

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                          
Query: 9      tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
              ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 126042 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 126099

                                                                          
Query: 69     ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
              ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 126100 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 126159

                                                                          
Query: 129    ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
              ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 126160 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 126219

                                                                          
Query: 189    agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
               |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 126220 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 126279

                                                                          
Query: 249    tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 126280 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 126339

                                                                          
Query: 309    gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
              ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 126340 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 126399

                                                                          
Query: 369    gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
              ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 126400 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 126459

                                                                          
Query: 429    aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126460 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 126519

                                       
Query: 489    tattgtctttccagaaagaaaaacc 513
              |||||||||||||||||||| ||||
Sbjct: 126520 tattgtctttccagaaagaagaacc 126544



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                          
Query: 550    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 126582 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 126641

                                                                          
Query: 610    gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
              |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 126642 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 126701

                                                                          
Query: 670    acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
              |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 126702 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 126761

                  
Query: 730    ctta 733
              ||||
Sbjct: 126762 ctta 126765

to top

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 77190 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 77247

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 77248 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 77307

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 77308 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 77367

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 77368 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 77427

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 77428 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 77487

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 77488 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 77547

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 77548 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 77607

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77608 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 77667

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||| ||||
Sbjct: 77668 tattgtctttccagaaagaagaacc 77692



 Score =  246 bits (124), Expect = 9e-62
 Identities = 169/184 (91%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77730 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77789

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             |||  ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 77790 gctcgtctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 77849

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 77850 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 77909

                 
Query: 730   ctta 733
             ||||
Sbjct: 77910 ctta 77913

to top

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
             complete sequence
          Length = 145980

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 73590 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 73533

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 73532 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 73473

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 73472 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 73413

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 73412 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 73353

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 73352 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 73293

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 73292 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 73233

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 73232 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 73173

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73172 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 73113

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||| ||||
Sbjct: 73112 tattgtctttccagaaagaagaacc 73088



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 73009 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 72950

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 72949 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 72890

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 72889 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 72830

                 
Query: 730   ctta 733
             ||||
Sbjct: 72829 ctta 72826



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 550   tatatctctaatcgaataaattgacttcgtatggg 584
             ||||| ||||| |||| ||||||||||||||||||
Sbjct: 73049 tatatttctaaccgaagaaattgacttcgtatggg 73015

to top

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 75391 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 75448

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 75449 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 75508

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 75509 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 75568

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 75569 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 75628

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 75629 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 75688

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 75689 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 75748

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 75749 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 75808

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75809 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 75868

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||| ||||
Sbjct: 75869 tattgtctttccagaaagaagaacc 75893



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 75932 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 75991

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 75992 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 76051

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 76052 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 76111

                 
Query: 730   ctta 733
             ||||
Sbjct: 76112 ctta 76115

to top

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                        
Query: 9    tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
            ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 9455 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 9512

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 9513 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 9572

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
            ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 9573 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 9632

                                                                        
Query: 189  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 9633 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 9692

                                                                        
Query: 249  tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9693 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 9752

                                                                        
Query: 309  gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9753 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 9812

                                                                        
Query: 369  gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
            ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 9813 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 9872

                                                                        
Query: 429  aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9873 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 9932

                                     
Query: 489  tattgtctttccagaaagaaaaacc 513
            |||||||||||||||||||| ||||
Sbjct: 9933 tattgtctttccagaaagaagaacc 9957



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 9996  tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 10055

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 10056 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 10115

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 10116 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 10175

                 
Query: 730   ctta 733
             ||||
Sbjct: 10176 ctta 10179

to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                           
Query: 9       tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
               ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 9192517 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 9192460

                                                                           
Query: 69      ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
               ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 9192459 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 9192400

                                                                           
Query: 129     ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
               ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 9192399 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 9192340

                                                                           
Query: 189     agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 9192339 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 9192280

                                                                           
Query: 249     tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
               |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9192279 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 9192220

                                                                           
Query: 309     gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9192219 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 9192160

                                                                           
Query: 369     gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
               ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 9192159 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 9192100

                                                                           
Query: 429     aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192099 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 9192040

                                        
Query: 489     tattgtctttccagaaagaaaaacc 513
               |||||||||||||||||||| ||||
Sbjct: 9192039 tattgtctttccagaaagaagaacc 9192015



 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                           
Query: 9       tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
               ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 9115564 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 9115507

                                                                           
Query: 69      ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
               ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 9115506 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 9115447

                                                                           
Query: 129     ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
               ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 9115446 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 9115387

                                                                           
Query: 189     agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 9115386 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 9115327

                                                                           
Query: 249     tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
               |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9115326 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 9115267

                                                                           
Query: 309     gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9115266 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 9115207

                                                                           
Query: 369     gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
               ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 9115206 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 9115147

                                                                           
Query: 429     aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9115146 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 9115087

                                        
Query: 489     tattgtctttccagaaagaaaaacc 513
               |||||||||||||||||||| ||||
Sbjct: 9115086 tattgtctttccagaaagaagaacc 9115062



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                           
Query: 550     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 9191936 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 9191877

                                                                           
Query: 610     gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
               ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 9191876 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 9191817

                                                                           
Query: 670     acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
               |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 9191816 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 9191757

                   
Query: 730     ctta 733
               ||||
Sbjct: 9191756 ctta 9191753



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                           
Query: 550     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 9114983 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 9114924

                                                                           
Query: 610     gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
               ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 9114923 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 9114864

                                                                           
Query: 670     acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
               |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 9114863 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 9114804

                   
Query: 730     ctta 733
               ||||
Sbjct: 9114803 ctta 9114800



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                                   
Query: 245      tacgtacaattacagctcgaattacttcggatctttctagaggcatttggg 295
                |||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 17722552 tacgtacaattacagctcaaattacttcggatctttccagaggcatttggg 17722502



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 73/84 (86%), Gaps = 4/84 (4%)
 Strand = Plus / Plus

                                                                           
Query: 236     ctttacatgtacgtacaattacagctcgaattact----tcggatctttctagaggcatt 291
               ||||||||||||||||||||||||||||  |||||    || ||||||||||||||||||
Sbjct: 2072703 ctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttctagaggcatt 2072762

                                       
Query: 292     tggggcaatgcgtctttgattaca 315
               | ||||| ||| |||||| |||||
Sbjct: 2072763 ttgggcactgcttctttggttaca 2072786



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 550     tatatctctaatcgaataaattgacttcgtatggg 584
               ||||| ||||| |||| ||||||||||||||||||
Sbjct: 9191976 tatatttctaaccgaagaaattgacttcgtatggg 9191942



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 550     tatatctctaatcgaataaattgacttcgtatggg 584
               ||||| ||||| |||| ||||||||||||||||||
Sbjct: 9115023 tatatttctaaccgaagaaattgacttcgtatggg 9114989

to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                            
Query: 9        tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
                ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 10368999 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 10369056

                                                                            
Query: 69       ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 10369057 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 10369116

                                                                            
Query: 129      ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
                ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 10369117 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 10369176

                                                                            
Query: 189      agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 10369177 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 10369236

                                                                            
Query: 249      tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
                |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 10369237 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 10369296

                                                                            
Query: 309      gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 10369297 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 10369356

                                                                            
Query: 369      gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
                ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 10369357 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 10369416

                                                                            
Query: 429      aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10369417 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 10369476

                                         
Query: 489      tattgtctttccagaaagaaaaacc 513
                |||||||||||||||||||| ||||
Sbjct: 10369477 tattgtctttccagaaagaagaacc 10369501



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                            
Query: 550      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 10369540 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 10369599

                                                                            
Query: 610      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
                ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 10369600 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 10369659

                                                                            
Query: 670      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
                |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 10369660 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 10369719

                    
Query: 730      ctta 733
                ||||
Sbjct: 10369720 ctta 10369723



 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/165 (87%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                            
Query: 228      tttgaattctttacatgtacgtacaattacagctcgaattacttcgg----atctttcta 283
                ||||| ||||||||||||||||||||||||||||||  ||||||| |    |||||||||
Sbjct: 14021582 tttgagttctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttcta 14021523

                                                                            
Query: 284      gaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcat 343
                ||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 14021522 gaggcattttgggcactgcttctttgattacagcaacaataacgtcaccaatatgagcat 14021463

                                                             
Query: 344      atcgctgattaccagcagctcctatgactcgaatacacatcaatt 388
                |||  |||||||   ||||||||| || ||||||||| |||||||
Sbjct: 14021462 atcagtgattac---cagctcctaagattcgaatacatatcaatt 14021421

to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                           
Query: 9       tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
               ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 9259859 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 9259802

                                                                           
Query: 69      ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
               ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 9259801 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 9259742

                                                                           
Query: 129     ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
               ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 9259741 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 9259682

                                                                           
Query: 189     agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 9259681 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 9259622

                                                                           
Query: 249     tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
               |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9259621 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 9259562

                                                                           
Query: 309     gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9259561 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 9259502

                                                                           
Query: 369     gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
               ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 9259501 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 9259442

                                                                           
Query: 429     aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259441 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 9259382

                                        
Query: 489     tattgtctttccagaaagaaaaacc 513
               |||||||||||||||||||| ||||
Sbjct: 9259381 tattgtctttccagaaagaagaacc 9259357



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                           
Query: 550     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 9259318 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 9259259

                                                                           
Query: 610     gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
               ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 9259258 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 9259199

                                                                           
Query: 670     acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
               |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 9259198 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 9259139

                   
Query: 730     ctta 733
               ||||
Sbjct: 9259138 ctta 9259135



 Score =  242 bits (122), Expect = 1e-60
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                            
Query: 168      tttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtcttcgca 227
                |||||||||||| |||||| | |||||||  |||||||| ||||||||||| ||||||||
Sbjct: 10791213 tttttgatcaatgataacctctgcattgttgtcatagcgtattattataccatcttcgca 10791154

                                                                            
Query: 228      tttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttctagagg 287
                |||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 10791153 tttgaactctttacatgtatgtacaattacacctcaaattacttcggatctttctagagg 10791094

                                                                  
Query: 288      catttggggcaatgcgtctttgattacagcaacaataacatcaccaatac 337
                ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 10791093 catttggggcactgcgtctttgattacagcaacaataacatcaccaatac 10791044



 Score =  186 bits (94), Expect = 7e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 72       taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 131
                |||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 17206218 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattcctcggc 17206277

                                                                            
Query: 132      aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 191
                 || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 17206278 cattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 17206336

                                                          
Query: 192      attgtcatcatagcggattattataccgtcttcgcatttgaa 233
                | |||  |||||||| ||||||||||||||||||||||||||
Sbjct: 17206337 actgttgtcatagcgtattattataccgtcttcgcatttgaa 17206378

to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                            
Query: 9        tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
                ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 12755755 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 12755812

                                                                            
Query: 69       ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 12755813 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 12755872

                                                                            
Query: 129      ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
                ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 12755873 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 12755932

                                                                            
Query: 189      agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 12755933 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 12755992

                                                                            
Query: 249      tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
                |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 12755993 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 12756052

                                                                            
Query: 309      gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 12756053 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 12756112

                                                                            
Query: 369      gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
                ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 12756113 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 12756172

                                                                            
Query: 429      aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12756173 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 12756232

                                         
Query: 489      tattgtctttccagaaagaaaaacc 513
                |||||||||||||||||||| ||||
Sbjct: 12756233 tattgtctttccagaaagaagaacc 12756257



 Score =  757 bits (382), Expect = 0.0
 Identities = 475/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                            
Query: 9        tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
                ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 19545826 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 19545769

                                                                            
Query: 69       ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
                ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 19545768 ttataatacttcaggagctaatgaaactagtttagtaaaattcaattctctcaattcctc 19545709

                                                                            
Query: 129      ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
                | | |||| ||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 19545708 gacgatcgtgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 19545649

                                                                            
Query: 189      agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 19545648 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 19545589

                                                                            
Query: 249      tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
                |||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||
Sbjct: 19545588 tacaattacagctcgaattacttgagatctttctagaggcatttggggcactgcgtcttt 19545529

                                                                            
Query: 309      gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
                ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 19545528 gattacagcaacaataacatcaccaatacgagcatattgctgattactagcagctcctat 19545469

                                                                            
Query: 369      gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
                ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 19545468 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 19545409

                                                                            
Query: 429      aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19545408 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 19545349

                                         
Query: 489      tattgtctttccagaaagaaaaacc 513
                |||||||||||||||||||| ||||
Sbjct: 19545348 tattgtctttccagaaagaagaacc 19545324



 Score =  351 bits (177), Expect = 2e-93
 Identities = 195/201 (97%)
 Strand = Plus / Minus

                                                                           
Query: 183     aaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttaca 242
               |||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 3036155 aaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttaca 3036096

                                                                           
Query: 243     tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 302
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3036095 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 3036036

                                                                           
Query: 303     gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagc 362
               ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3036035 gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagc 3035976

                                    
Query: 363     tcctatgactcgaatacacat 383
               |||||||||||||||||||||
Sbjct: 3035975 tcctatgactcgaatacacat 3035955



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                            
Query: 550      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 12756295 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 12756354

                                                                            
Query: 610      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 12756355 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 12756414

                                                                            
Query: 670      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
                |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 12756415 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 12756474

                    
Query: 730      ctta 733
                ||||
Sbjct: 12756475 ctta 12756478



 Score =  246 bits (124), Expect = 9e-62
 Identities = 169/184 (91%)
 Strand = Plus / Minus

                                                                            
Query: 550      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 19545285 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 19545226

                                                                            
Query: 610      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
                ||||||||||||| |||||| |||||||  ||||||||||||||||| |||| |||||||
Sbjct: 19545225 gctgctctagctatagtttcggatactctgcccatttcataaagtattcgacttggttta 19545166

                                                                            
Query: 670      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
                |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 19545165 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgtcggt 19545106

                    
Query: 730      ctta 733
                ||||
Sbjct: 19545105 ctta 19545102



 Score =  174 bits (88), Expect = 3e-40
 Identities = 235/280 (83%), Gaps = 3/280 (1%)
 Strand = Plus / Plus

                                                                           
Query: 88      aatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaact 147
               ||||||| ||||||  || |||||||||||||||||||| |||| |||  ||||||||| 
Sbjct: 3109053 aatgaaattattttaatacaattcaattctctcaattcc-cggcgatcatgccaaaaacg 3109111

                                                                           
Query: 148     cgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcgg 207
                |||| || ||||| || | ||||||||| || |||||||  | ||  ||  ||||||| 
Sbjct: 3109112 tgagtgccctttggatttcttttttgatcgatgataaccgttgtata-tcggcatagcgt 3109170

                                                                           
Query: 208     attattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaatt 267
               |||||||||| || ||| |||||||| ||||||||||||| || ||||||  ||| ||||
Sbjct: 3109171 attattatactgt-ttcacatttgaactctttacatgtacatataattacttctctaatt 3109229

                                                                           
Query: 268     acttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaataaca 327
               |||| || ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 3109230 actttgggtctttctagaggcatttggggcactgcatctttcattacagcaacaataaca 3109289

                                                       
Query: 328     tcaccaatacgagcatatcgctgattaccagcagctccta 367
               ||| ||||| |||||||| | ||||||| |||||| ||||
Sbjct: 3109290 tcatcaatatgagcatattgttgattactagcagcaccta 3109329



 Score =  107 bits (54), Expect = 5e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                           
Query: 410     ctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaa 469
               |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3109364 ctacatttaaaagggtttgaggttgaatcatattattttgatgtcaatttgttatttcaa 3109423

                 
Query: 470     tg 471
               ||
Sbjct: 3109424 tg 3109425



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 451     tttcaatttgttatttcaatgcaaa 475
               ||||||||||| |||||||||||||
Sbjct: 4108954 tttcaatttgtaatttcaatgcaaa 4108978

to top

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 71072 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 71015

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 71014 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 70955

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 70954 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 70895

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 70894 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 70835

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 70834 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 70775

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 70774 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 70715

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 70714 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 70655

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70654 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 70595

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||| ||||
Sbjct: 70594 tattgtctttccagaaagaagaacc 70570



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 70531 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 70472

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 70471 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 70412

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 70411 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 70352

                 
Query: 730   ctta 733
             ||||
Sbjct: 70351 ctta 70348

to top

>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full
            insert sequence
          Length = 2166

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
            ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 1530 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 1473

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1472 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 1413

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
            ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1412 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 1353

                                                                        
Query: 189  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1352 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 1293

                                                                        
Query: 249  tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1292 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 1233

                                                                        
Query: 309  gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1232 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 1173

                                                                        
Query: 369  gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
            ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1172 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 1113

                                                                        
Query: 429  aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1112 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 1053

                                     
Query: 489  tattgtctttccagaaagaaaaacc 513
            |||||||||||||||||||| ||||
Sbjct: 1052 tattgtctttccagaaagaagaacc 1028



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                       
Query: 550 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 990 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 931

                                                                       
Query: 610 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
           |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 930 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 871

                                                                       
Query: 670 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 870 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 811

               
Query: 730 ctta 733
           ||||
Sbjct: 810 ctta 807

to top

>dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G06, full
            insert sequence
          Length = 1764

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
            ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 1745 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 1688

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1687 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 1628

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
            ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1627 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 1568

                                                                        
Query: 189  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1567 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 1508

                                                                        
Query: 249  tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1507 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 1448

                                                                        
Query: 309  gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1447 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 1388

                                                                        
Query: 369  gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
            ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1387 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 1328

                                                                        
Query: 429  aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 1268

                                     
Query: 489  tattgtctttccagaaagaaaaacc 513
            |||||||||||||||||||| ||||
Sbjct: 1267 tattgtctttccagaaagaagaacc 1243



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                        
Query: 550  tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
            ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 1205 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 1146

                                                                        
Query: 610  gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
            |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 1145 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 1086

                                                                        
Query: 670  acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
            |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 1085 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 1026

                
Query: 730  ctta 733
            ||||
Sbjct: 1025 ctta 1022

to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  805 bits (406), Expect = 0.0
 Identities = 481/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                            
Query: 9        tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
                ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 10375038 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 10375095

                                                                            
Query: 69       ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 10375096 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 10375155

                                                                            
Query: 129      ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
                ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 10375156 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 10375215

                                                                            
Query: 189      agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 10375216 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 10375275

                                                                            
Query: 249      tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
                |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 10375276 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 10375335

                                                                            
Query: 309      gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 10375336 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 10375395

                                                                            
Query: 369      gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
                ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 10375396 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 10375455

                                                                            
Query: 429      aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375456 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 10375515

                                         
Query: 489      tattgtctttccagaaagaaaaacc 513
                |||||||||||||||||||| ||||
Sbjct: 10375516 tattgtctttccagaaagaagaacc 10375540



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                            
Query: 550      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 10375579 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 10375638

                                                                            
Query: 610      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
                ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 10375639 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 10375698

                                                                            
Query: 670      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
                |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 10375699 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 10375758

                    
Query: 730      ctta 733
                ||||
Sbjct: 10375759 ctta 10375762



 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/165 (87%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                            
Query: 228      tttgaattctttacatgtacgtacaattacagctcgaattacttcgg----atctttcta 283
                ||||| ||||||||||||||||||||||||||||||  ||||||| |    |||||||||
Sbjct: 14029824 tttgagttctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttcta 14029765

                                                                            
Query: 284      gaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcat 343
                ||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 14029764 gaggcattttgggcactgcttctttgattacagcaacaataacgtcaccaatatgagcat 14029705

                                                             
Query: 344      atcgctgattaccagcagctcctatgactcgaatacacatcaatt 388
                |||  |||||||   ||||||||| || ||||||||| |||||||
Sbjct: 14029704 atcagtgattac---cagctcctaagattcgaatacatatcaatt 14029663

to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  797 bits (402), Expect = 0.0
 Identities = 480/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                           
Query: 9       tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
               ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 5656653 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 5656710

                                                                           
Query: 69      ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
               ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 5656711 ttataatacttcaggagctaatgaaactattgtagtaaaattcaattctctcaattcctc 5656770

                                                                           
Query: 129     ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
               ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 5656771 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 5656830

                                                                           
Query: 189     agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5656831 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 5656890

                                                                           
Query: 249     tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
               |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5656891 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 5656950

                                                                           
Query: 309     gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5656951 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 5657010

                                                                           
Query: 369     gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
               ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 5657011 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 5657070

                                                                           
Query: 429     aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5657071 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 5657130

                                        
Query: 489     tattgtctttccagaaagaaaaacc 513
               |||||||||||||||||||| ||||
Sbjct: 5657131 tattgtctttccagaaagaagaacc 5657155



 Score =  385 bits (194), Expect = e-103
 Identities = 254/273 (93%), Gaps = 2/273 (0%)
 Strand = Plus / Plus

                                                                            
Query: 9        tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
                ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 20514165 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 20514222

                                                                            
Query: 69       ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 20514223 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 20514282

                                                                            
Query: 129      ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
                ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 20514283 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 20514342

                                                                            
Query: 189      agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 20514343 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 20514402

                                                 
Query: 249      tacaattacagctcgaattacttcggatctttc 281
                |||||||||||||||||||||||||||||||||
Sbjct: 20514403 tacaattacagctcgaattacttcggatctttc 20514435



 Score =  198 bits (100), Expect = 2e-47
 Identities = 133/144 (92%)
 Strand = Plus / Plus

                                                                           
Query: 550     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 5657194 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 5657253

                                                                           
Query: 610     gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
               |||||| |||||||| |||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 5657254 gctgctatagctacaatttcggatactccgcccatttcataaagtattcgacctggttta 5657313

                                       
Query: 670     acaacggctacccaatattcgggg 693
               ||||||||||||||||||||||||
Sbjct: 5657314 acaacggctacccaatattcgggg 5657337



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 95       ctattttggtaaaattcaattctctcaattc 125
                ||||||| |||||||||||||||||||||||
Sbjct: 25823760 ctattttagtaaaattcaattctctcaattc 25823730

to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  797 bits (402), Expect = 0.0
 Identities = 480/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                            
Query: 9        tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
                ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 33496969 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 33497026

                                                                            
Query: 69       ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 33497027 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 33497086

                                                                            
Query: 129      ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
                ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 33497087 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 33497146

                                                                            
Query: 189      agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 33497147 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 33497206

                                                                            
Query: 249      tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
                |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 33497207 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcatcttt 33497266

                                                                            
Query: 309      gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 33497267 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 33497326

                                                                            
Query: 369      gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
                ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 33497327 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 33497386

                                                                            
Query: 429      aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33497387 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 33497446

                                         
Query: 489      tattgtctttccagaaagaaaaacc 513
                |||||||||||||||||||| ||||
Sbjct: 33497447 tattgtctttccagaaagaagaacc 33497471



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                            
Query: 550      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 33497509 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 33497568

                                                                            
Query: 610      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
                ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 33497569 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 33497628

                                                                            
Query: 670      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
                |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 33497629 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 33497688

                    
Query: 730      ctta 733
                ||||
Sbjct: 33497689 ctta 33497692



 Score =  145 bits (73), Expect = 2e-31
 Identities = 160/189 (84%)
 Strand = Plus / Minus

                                                                            
Query: 157      tttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattata 216
                ||||| || |||||||||||||| |||||  | |||||||  | |||| | |||||||||
Sbjct: 30976459 tttggatttcctttttgatcaatgataacgactgcattgttgttatagagtattattata 30976400

                                                                            
Query: 217      ccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggat 276
                |||| || ||||||||| ||  |||||||| | |||||||||| ||| |||||||  |||
Sbjct: 30976399 ccgtttttgcatttgaaatccatacatgtatgcacaattacagatcgtattacttttgat 30976340

                                                                            
Query: 277      ctttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaata 336
                |||||||||||||| | || || ||| ||||| |||||||||||||||||||||||||||
Sbjct: 30976339 ctttctagaggcatcttggacactgcatcttttattacagcaacaataacatcaccaata 30976280

                         
Query: 337      cgagcatat 345
                |||| ||||
Sbjct: 30976279 cgagtatat 30976271



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                            
Query: 621      tacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctac 680
                |||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||
Sbjct: 15131590 tacagtttcagatactccgcccttttcataaagtactcgacctggtttaacaacggctac 15131531



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 101/124 (81%), Gaps = 8/124 (6%)
 Strand = Plus / Minus

                                                                            
Query: 139      ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 198
                ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 39109319 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 39109268

                                                                            
Query: 199      tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 258
                ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||| 
Sbjct: 39109267 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattact 39109208

                    
Query: 259      gctc 262
                ||||
Sbjct: 39109207 gctc 39109204



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 139      ccaaaaactcgagttccttttgggttgcctttttgat 175
                ||||||||||||||||||||||| || |||| |||||
Sbjct: 39108053 ccaaaaactcgagttccttttggatttccttcttgat 39108017



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 139      ccaaaaactcgagttccttttgggttgcctttttgat 175
                ||||||||||||||||||||||| || |||| |||||
Sbjct: 39103979 ccaaaaactcgagttccttttggatttccttcttgat 39103943

to top

>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score =  797 bits (402), Expect = 0.0
 Identities = 480/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 42166 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 42223

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 42224 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 42283

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 42284 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 42343

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 42344 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 42403

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 42404 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcatcttt 42463

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 42464 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 42523

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 42524 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 42583

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42584 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 42643

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||| ||||
Sbjct: 42644 tattgtctttccagaaagaagaacc 42668



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 42706 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 42765

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 42766 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 42825

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 42826 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 42885

                 
Query: 730   ctta 733
             ||||
Sbjct: 42886 ctta 42889

to top

>dbj|AK063122.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-E09, full
           insert sequence
          Length = 792

 Score =  797 bits (402), Expect = 0.0
 Identities = 480/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                       
Query: 9   tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
           ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 779 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 722

                                                                       
Query: 69  ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 721 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 662

                                                                       
Query: 129 ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
           ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 661 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 602

                                                                       
Query: 189 agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
            |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 601 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 542

                                                                       
Query: 249 tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
           |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 541 tacaattacagctcgaattacttcggatctttctagaggcatttggagcactgcgtcttt 482

                                                                       
Query: 309 gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 481 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 422

                                                                       
Query: 369 gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
           ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 421 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 362

                                                                       
Query: 429 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 302

                                    
Query: 489 tattgtctttccagaaagaaaaacc 513
           |||||||||||||||||||| ||||
Sbjct: 301 tattgtctttccagaaagaagaacc 277



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                       
Query: 550 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 239 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 180

                                                                       
Query: 610 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
           |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 179 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 120

                                                                       
Query: 670 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 119 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 60

               
Query: 730 ctta 733
           ||||
Sbjct: 59  ctta 56

to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  797 bits (402), Expect = 0.0
 Identities = 480/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                           
Query: 9       tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
               ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 5656646 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 5656703

                                                                           
Query: 69      ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
               ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 5656704 ttataatacttcaggagctaatgaaactattgtagtaaaattcaattctctcaattcctc 5656763

                                                                           
Query: 129     ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
               ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 5656764 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 5656823

                                                                           
Query: 189     agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5656824 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 5656883

                                                                           
Query: 249     tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
               |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5656884 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 5656943

                                                                           
Query: 309     gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5656944 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 5657003

                                                                           
Query: 369     gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
               ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 5657004 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 5657063

                                                                           
Query: 429     aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5657064 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 5657123

                                        
Query: 489     tattgtctttccagaaagaaaaacc 513
               |||||||||||||||||||| ||||
Sbjct: 5657124 tattgtctttccagaaagaagaacc 5657148



 Score =  385 bits (194), Expect = e-103
 Identities = 254/273 (93%), Gaps = 2/273 (0%)
 Strand = Plus / Plus

                                                                            
Query: 9        tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
                ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 20440379 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 20440436

                                                                            
Query: 69       ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 20440437 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 20440496

                                                                            
Query: 129      ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
                ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 20440497 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 20440556

                                                                            
Query: 189      agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 20440557 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 20440616

                                                 
Query: 249      tacaattacagctcgaattacttcggatctttc 281
                |||||||||||||||||||||||||||||||||
Sbjct: 20440617 tacaattacagctcgaattacttcggatctttc 20440649



 Score =  198 bits (100), Expect = 2e-47
 Identities = 133/144 (92%)
 Strand = Plus / Plus

                                                                           
Query: 550     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 5657187 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 5657246

                                                                           
Query: 610     gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
               |||||| |||||||| |||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 5657247 gctgctatagctacaatttcggatactccgcccatttcataaagtattcgacctggttta 5657306

                                       
Query: 670     acaacggctacccaatattcgggg 693
               ||||||||||||||||||||||||
Sbjct: 5657307 acaacggctacccaatattcgggg 5657330



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 95       ctattttggtaaaattcaattctctcaattc 125
                ||||||| |||||||||||||||||||||||
Sbjct: 25751936 ctattttagtaaaattcaattctctcaattc 25751906

to top

>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 159056

 Score =  797 bits (402), Expect = 0.0
 Identities = 480/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 11176 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 11233

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 11234 ttataatacttcaggagctaatgaaactattgtagtaaaattcaattctctcaattcctc 11293

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 11294 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 11353

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 11354 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 11413

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 11414 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 11473

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 11474 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 11533

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 11534 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 11593

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11594 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 11653

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||| ||||
Sbjct: 11654 tattgtctttccagaaagaagaacc 11678



 Score =  198 bits (100), Expect = 2e-47
 Identities = 133/144 (92%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 11717 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 11776

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             |||||| |||||||| |||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 11777 gctgctatagctacaatttcggatactccgcccatttcataaagtattcgacctggttta 11836

                                     
Query: 670   acaacggctacccaatattcgggg 693
             ||||||||||||||||||||||||
Sbjct: 11837 acaacggctacccaatattcgggg 11860

to top

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  797 bits (402), Expect = 0.0
 Identities = 480/505 (95%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 77146 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 77203

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 77204 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 77263

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 77264 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 77323

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 77324 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 77383

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 77384 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 77443

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 77444 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 77503

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             |||||||||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct: 77504 gactcgaatacacatcaattttcgagctccgctgttatctgctacatttaaaagggtctg 77563

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77564 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 77623

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||| ||||
Sbjct: 77624 tattgtctttccagaaagaagaacc 77648



 Score =  254 bits (128), Expect = 4e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77687 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77746

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 77747 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 77806

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 77807 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 77866

                 
Query: 730   ctta 733
             ||||
Sbjct: 77867 ctta 77870

to top

>ref|XM_479424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2154

 Score =  789 bits (398), Expect = 0.0
 Identities = 479/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
            ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 1520 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 1463

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1462 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 1403

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
            ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1402 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 1343

                                                                        
Query: 189  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1342 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 1283

                                                                        
Query: 249  tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1282 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 1223

                                                                        
Query: 309  gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1222 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 1163

                                                                        
Query: 369  gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
            |||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||
Sbjct: 1162 gactcgaatacacatcaatttttgagctccactgttatctgctacatttaaaagggtctg 1103

                                                                        
Query: 429  aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 1043

                                     
Query: 489  tattgtctttccagaaagaaaaacc 513
            ||| |||||||||||||||| ||||
Sbjct: 1042 tatcgtctttccagaaagaagaacc 1018



 Score =  240 bits (121), Expect = 5e-60
 Identities = 160/173 (92%)
 Strand = Plus / Minus

                                                                       
Query: 550 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
           ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 980 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 921

                                                                       
Query: 610 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
           |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 920 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 861

                                                                
Query: 670 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
           ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 860 acaacggatacccaatattcgggggatccctttcccgaacccatacgtgtttc 808

to top

>ref|XM_479423.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2154

 Score =  789 bits (398), Expect = 0.0
 Identities = 479/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
            ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 1520 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 1463

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1462 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 1403

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
            ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1402 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 1343

                                                                        
Query: 189  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1342 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 1283

                                                                        
Query: 249  tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1282 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 1223

                                                                        
Query: 309  gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1222 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 1163

                                                                        
Query: 369  gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
            |||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||
Sbjct: 1162 gactcgaatacacatcaatttttgagctccactgttatctgctacatttaaaagggtctg 1103

                                                                        
Query: 429  aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 1043

                                     
Query: 489  tattgtctttccagaaagaaaaacc 513
            ||| |||||||||||||||| ||||
Sbjct: 1042 tatcgtctttccagaaagaagaacc 1018



 Score =  240 bits (121), Expect = 5e-60
 Identities = 160/173 (92%)
 Strand = Plus / Minus

                                                                       
Query: 550 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
           ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 980 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 921

                                                                       
Query: 610 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
           |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 920 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 861

                                                                
Query: 670 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
           ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 860 acaacggatacccaatattcgggggatccctttcccgaacccatacgtgtttc 808

to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  789 bits (398), Expect = 0.0
 Identities = 479/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                            
Query: 9        tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
                ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 27922686 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 27922743

                                                                            
Query: 69       ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 27922744 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 27922803

                                                                            
Query: 129      ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
                ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 27922804 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 27922863

                                                                            
Query: 189      agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 27922864 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 27922923

                                                                            
Query: 249      tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
                |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 27922924 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 27922983

                                                                            
Query: 309      gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 27922984 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 27923043

                                                                            
Query: 369      gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
                |||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||
Sbjct: 27923044 gactcgaatacacatcaatttttgagctccactgttatctgctacatttaaaagggtctg 27923103

                                                                            
Query: 429      aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27923104 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 27923163

                                         
Query: 489      tattgtctttccagaaagaaaaacc 513
                ||| |||||||||||||||| ||||
Sbjct: 27923164 tatcgtctttccagaaagaagaacc 27923188



 Score =  240 bits (121), Expect = 5e-60
 Identities = 160/173 (92%)
 Strand = Plus / Plus

                                                                            
Query: 550      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
                ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 27923226 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 27923285

                                                                            
Query: 610      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 27923286 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 27923345

                                                                     
Query: 670      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
                ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 27923346 acaacggatacccaatattcgggggatccctttcccgaacccatacgtgtttc 27923398



 Score =  141 bits (71), Expect = 4e-30
 Identities = 126/143 (88%), Gaps = 1/143 (0%)
 Strand = Plus / Minus

                                                                           
Query: 91      gaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcga 150
               ||||||||||| |||||||||||||||||||||| |||| | |||||||||||||| | |
Sbjct: 4509148 gaaactattttagtaaaattcaattctctcaattactcgacgatcgcgccaaaaacgcaa 4509089

                                                                           
Query: 151     gttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggatt 210
               ||||| ||||| || ||||||| |  ||| ||| |||  ||||||||||||||||| |||
Sbjct: 4509088 gttccatttggatttccttttt-actaatgatatccgttgcattgtcatcatagcgtatt 4509030

                                      
Query: 211     attataccgtcttcgcatttgaa 233
               |||||||||||||||||||||||
Sbjct: 4509029 attataccgtcttcgcatttgaa 4509007

to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  789 bits (398), Expect = 0.0
 Identities = 479/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                            
Query: 9        tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
                ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 23181899 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 23181842

                                                                            
Query: 69       ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 23181841 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 23181782

                                                                            
Query: 129      ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
                ||| |||| |||||||||  ||||||||||||| || |||||||||||||| ||||||||
Sbjct: 23181781 ggcgatcgtgccaaaaacgtgagttccttttggatttcctttttgatcaatgataaccgc 23181722

                                                                            
Query: 189      agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 23181721 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 23181662

                                                                            
Query: 249      tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
                |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 23181661 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 23181602

                                                                            
Query: 309      gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 23181601 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 23181542

                                                                            
Query: 369      gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
                ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 23181541 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 23181482

                                                                            
Query: 429      aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23181481 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 23181422

                                         
Query: 489      tattgtctttccagaaagaaaaacc 513
                |||||||||||||||||||| ||||
Sbjct: 23181421 tattgtctttccagaaagaagaacc 23181397



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                            
Query: 550      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 23181359 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 23181300

                                                                            
Query: 610      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 23181299 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 23181240

                                                                            
Query: 670      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
                |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 23181239 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 23181180

                    
Query: 730      ctta 733
                ||||
Sbjct: 23181179 ctta 23181176

to top

>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score =  789 bits (398), Expect = 0.0
 Identities = 479/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 86044 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 86101

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 86102 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 86161

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 86162 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 86221

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 86222 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 86281

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 86282 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 86341

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 86342 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 86401

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             |||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||
Sbjct: 86402 gactcgaatacacatcaatttttgagctccactgttatctgctacatttaaaagggtctg 86461

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86462 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 86521

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             ||| |||||||||||||||| ||||
Sbjct: 86522 tatcgtctttccagaaagaagaacc 86546



 Score =  240 bits (121), Expect = 5e-60
 Identities = 160/173 (92%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 86584 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 86643

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 86644 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 86703

                                                                  
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
             ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 86704 acaacggatacccaatattcgggggatccctttcccgaacccatacgtgtttc 86756

to top

>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score =  789 bits (398), Expect = 0.0
 Identities = 479/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 12020 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 12077

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 12078 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 12137

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 12138 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 12197

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 12198 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 12257

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 12258 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 12317

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 12318 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 12377

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             |||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||
Sbjct: 12378 gactcgaatacacatcaatttttgagctccactgttatctgctacatttaaaagggtctg 12437

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12438 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 12497

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             ||| |||||||||||||||| ||||
Sbjct: 12498 tatcgtctttccagaaagaagaacc 12522



 Score =  240 bits (121), Expect = 5e-60
 Identities = 160/173 (92%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 12560 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 12619

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 12620 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 12679

                                                                  
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
             ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 12680 acaacggatacccaatattcgggggatccctttcccgaacccatacgtgtttc 12732

to top

>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0417D05
          Length = 165752

 Score =  789 bits (398), Expect = 0.0
 Identities = 479/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                          
Query: 9      tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
              ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 132547 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 132490

                                                                          
Query: 69     ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
              ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 132489 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 132430

                                                                          
Query: 129    ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
              ||| |||| |||||||||  ||||||||||||| || |||||||||||||| ||||||||
Sbjct: 132429 ggcgatcgtgccaaaaacgtgagttccttttggatttcctttttgatcaatgataaccgc 132370

                                                                          
Query: 189    agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
               |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 132369 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 132310

                                                                          
Query: 249    tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 132309 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 132250

                                                                          
Query: 309    gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
              ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 132249 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 132190

                                                                          
Query: 369    gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
              ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 132189 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 132130

                                                                          
Query: 429    aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132129 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 132070

                                       
Query: 489    tattgtctttccagaaagaaaaacc 513
              |||||||||||||||||||| ||||
Sbjct: 132069 tattgtctttccagaaagaagaacc 132045



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 550    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 132007 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 131948

                                                                          
Query: 610    gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
              |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 131947 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 131888

                                                                          
Query: 670    acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
              |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 131887 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 131828

                  
Query: 730    ctta 733
              ||||
Sbjct: 131827 ctta 131824

to top

>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0642B07
          Length = 139297

 Score =  789 bits (398), Expect = 0.0
 Identities = 479/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 16661 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 16604

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 16603 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 16544

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||| |||||||||  ||||||||||||| || |||||||||||||| ||||||||
Sbjct: 16543 ggcgatcgtgccaaaaacgtgagttccttttggatttcctttttgatcaatgataaccgc 16484

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 16483 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 16424

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 16423 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 16364

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 16363 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 16304

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 16303 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 16244

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16243 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 16184

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||| ||||
Sbjct: 16183 tattgtctttccagaaagaagaacc 16159



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 16121 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 16062

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 16061 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 16002

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 16001 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 15942

                 
Query: 730   ctta 733
             ||||
Sbjct: 15941 ctta 15938

to top

>ref|XM_450630.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 793

 Score =  765 bits (386), Expect = 0.0
 Identities = 476/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                       
Query: 9   tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
           ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 780 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 723

                                                                       
Query: 69  ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 722 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 663

                                                                       
Query: 129 ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
           ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 662 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 603

                                                                       
Query: 189 agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
            |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 602 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 543

                                                                       
Query: 249 tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
           |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 542 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactacgtcttt 483

                                                                       
Query: 309 gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
           ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 482 gattacagcaacaataacatcaccaatacgagcatatcgctgactactagcagctcctat 423

                                                                       
Query: 369 gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
           ||||||||||||||| ||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 422 gactcgaatacacattaattttcgagctccagtgttatctgctacatttaaaagggtctg 363

                                                                       
Query: 429 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 362 aggttgaatcatattattttgatttcaatttattatttcaatgcaaaaggatgaaagaaa 303

                                    
Query: 489 tattgtctttccagaaagaaaaacc 513
           |||||||||||||||||||| ||||
Sbjct: 302 tattgtctttccagaaagaagaacc 278



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                       
Query: 550 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
           ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 239 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 180

                                                                       
Query: 610 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
           |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 179 gctgctctagctacagtttcggatactccgcccattttataaagtattcgacctggttta 120

                                                                       
Query: 670 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
           |||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || |||
Sbjct: 119 acaacggctacccaatattcgggggatccctttcccgaacccatatgtgtttcggtcggt 60

               
Query: 730 ctta 733
           ||||
Sbjct: 59  ctta 56

to top

>ref|XM_450631.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2141

 Score =  765 bits (386), Expect = 0.0
 Identities = 476/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
            ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 1508 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 1451

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1450 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 1391

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
            ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1390 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 1331

                                                                        
Query: 189  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1330 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 1271

                                                                        
Query: 249  tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
            |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 1270 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactacgtcttt 1211

                                                                        
Query: 309  gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
            ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 1210 gattacagcaacaataacatcaccaatacgagcatatcgctgactactagcagctcctat 1151

                                                                        
Query: 369  gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
            ||||||||||||||| ||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 1150 gactcgaatacacattaattttcgagctccagtgttatctgctacatttaaaagggtctg 1091

                                                                        
Query: 429  aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1090 aggttgaatcatattattttgatttcaatttattatttcaatgcaaaaggatgaaagaaa 1031

                                     
Query: 489  tattgtctttccagaaagaaaaacc 513
            |||||||||||||||||||| ||||
Sbjct: 1030 tattgtctttccagaaagaagaacc 1006



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                       
Query: 550 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
           ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 967 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 908

                                                                       
Query: 610 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
           |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 907 gctgctctagctacagtttcggatactccgcccattttataaagtattcgacctggttta 848

                                                                       
Query: 670 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
           |||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || |||
Sbjct: 847 acaacggctacccaatattcgggggatccctttcccgaacccatatgtgtttcggtcggt 788

               
Query: 730 ctta 733
           ||||
Sbjct: 787 ctta 784

to top

>ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1001_G09.24 mRNA
          Length = 1742

 Score =  765 bits (386), Expect = 0.0
 Identities = 476/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
            ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 1723 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 1666

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1665 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 1606

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
            ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1605 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 1546

                                                                        
Query: 189  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1545 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 1486

                                                                        
Query: 249  tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
            |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 1485 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactacgtcttt 1426

                                                                        
Query: 309  gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
            ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 1425 gattacagcaacaataacatcaccaatacgagcatatcgctgactactagcagctcctat 1366

                                                                        
Query: 369  gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
            ||||||||||||||| ||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 1365 gactcgaatacacattaattttcgagctccagtgttatctgctacatttaaaagggtctg 1306

                                                                        
Query: 429  aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1305 aggttgaatcatattattttgatttcaatttattatttcaatgcaaaaggatgaaagaaa 1246

                                     
Query: 489  tattgtctttccagaaagaaaaacc 513
            |||||||||||||||||||| ||||
Sbjct: 1245 tattgtctttccagaaagaagaacc 1221



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                        
Query: 550  tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
            ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 1182 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 1123

                                                                        
Query: 610  gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
            |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 1122 gctgctctagctacagtttcggatactccgcccattttataaagtattcgacctggttta 1063

                                                                        
Query: 670  acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
            |||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || |||
Sbjct: 1062 acaacggctacccaatattcgggggatccctttcccgaacccatatgtgtttcggtcggt 1003

                
Query: 730  ctta 733
            ||||
Sbjct: 1002 ctta 999

to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  765 bits (386), Expect = 0.0
 Identities = 476/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                            
Query: 9        tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
                ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 11896680 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 11896623

                                                                            
Query: 69       ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 11896622 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 11896563

                                                                            
Query: 129      ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
                ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 11896562 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 11896503

                                                                            
Query: 189      agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
                 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 11896502 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 11896443

                                                                            
Query: 249      tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
                |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 11896442 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactacgtcttt 11896383

                                                                            
Query: 309      gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
                ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 11896382 gattacagcaacaataacatcaccaatacgagcatatcgctgactactagcagctcctat 11896323

                                                                            
Query: 369      gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
                ||||||||||||||| ||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 11896322 gactcgaatacacattaattttcgagctccagtgttatctgctacatttaaaagggtctg 11896263

                                                                            
Query: 429      aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
                ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11896262 aggttgaatcatattattttgatttcaatttattatttcaatgcaaaaggatgaaagaaa 11896203

                                         
Query: 489      tattgtctttccagaaagaaaaacc 513
                |||||||||||||||||||| ||||
Sbjct: 11896202 tattgtctttccagaaagaagaacc 11896178



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                            
Query: 550      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 14455950 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 14455891

                                                                            
Query: 610      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 14455890 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 14455831

                                                                            
Query: 670      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
                |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 14455830 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 14455771

                    
Query: 730      ctta 733
                ||||
Sbjct: 14455770 ctta 14455767



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                            
Query: 550      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
                ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 11896139 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 11896080

                                                                            
Query: 610      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
                |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 11896079 gctgctctagctacagtttcggatactccgcccattttataaagtattcgacctggttta 11896020

                                                                            
Query: 670      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
                |||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || |||
Sbjct: 11896019 acaacggctacccaatattcgggggatccctttcccgaacccatatgtgtttcggtcggt 11895960

                    
Query: 730      ctta 733
                ||||
Sbjct: 11895959 ctta 11895956



 Score =  186 bits (94), Expect = 7e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 72       taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 131
                |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 20862633 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 20862692

                                                                            
Query: 132      aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 191
                 || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 20862693 gattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 20862751

                                                          
Query: 192      attgtcatcatagcggattattataccgtcttcgcatttgaa 233
                |||||  |||||||| ||||||||||||||||||||||||||
Sbjct: 20862752 attgttgtcatagcgtattattataccgtcttcgcatttgaa 20862793



 Score =  153 bits (77), Expect = 1e-33
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                            
Query: 433      tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 492
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14456068 tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 14456009

                                     
Query: 493      gtctttccagaaagaaaaacc 513
                |||||||||||||||| ||||
Sbjct: 14456008 gtctttccagaaagaagaacc 14455988

to top

>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1001_G09
          Length = 118018

 Score =  765 bits (386), Expect = 0.0
 Identities = 476/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 78170 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 78113

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 78112 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 78053

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 78052 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 77993

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 77992 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 77933

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 77932 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactacgtcttt 77873

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 77872 gattacagcaacaataacatcaccaatacgagcatatcgctgactactagcagctcctat 77813

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||| ||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 77812 gactcgaatacacattaattttcgagctccagtgttatctgctacatttaaaagggtctg 77753

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 77752 aggttgaatcatattattttgatttcaatttattatttcaatgcaaaaggatgaaagaaa 77693

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||| ||||
Sbjct: 77692 tattgtctttccagaaagaagaacc 77668



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 77629 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 77570

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 77569 gctgctctagctacagtttcggatactccgcccattttataaagtattcgacctggttta 77510

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || |||
Sbjct: 77509 acaacggctacccaatattcgggggatccctttcccgaacccatatgtgtttcggtcggt 77450

                 
Query: 730   ctta 733
             ||||
Sbjct: 77449 ctta 77446

to top

>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0441A12
          Length = 185437

 Score =  765 bits (386), Expect = 0.0
 Identities = 476/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
            ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 1160 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 1103

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1102 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 1043

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
            ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1042 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 983

                                                                        
Query: 189  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 982  tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 923

                                                                        
Query: 249  tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
            |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 922  tacaattacagctcgaattacttcggatctttctagaggcatttggggcactacgtcttt 863

                                                                        
Query: 309  gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
            ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 862  gattacagcaacaataacatcaccaatacgagcatatcgctgactactagcagctcctat 803

                                                                        
Query: 369  gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
            ||||||||||||||| ||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 802  gactcgaatacacattaattttcgagctccagtgttatctgctacatttaaaagggtctg 743

                                                                        
Query: 429  aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 742  aggttgaatcatattattttgatttcaatttattatttcaatgcaaaaggatgaaagaaa 683

                                     
Query: 489  tattgtctttccagaaagaaaaacc 513
            |||||||||||||||||||| ||||
Sbjct: 682  tattgtctttccagaaagaagaacc 658



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                       
Query: 550 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
           ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 619 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 560

                                                                       
Query: 610 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
           |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 559 gctgctctagctacagtttcggatactccgcccattttataaagtattcgacctggttta 500

                                                                       
Query: 670 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
           |||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || |||
Sbjct: 499 acaacggctacccaatattcgggggatccctttcccgaacccatatgtgtttcggtcggt 440

               
Query: 730 ctta 733
           ||||
Sbjct: 439 ctta 436

to top

>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12,
              complete sequence
          Length = 157069

 Score =  757 bits (382), Expect = 0.0
 Identities = 475/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                          
Query: 9      tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
              ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 146538 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 146481

                                                                          
Query: 69     ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
              ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 146480 ttataatacttcaggagctaatgaaactagtttagtaaaattcaattctctcaattcctc 146421

                                                                          
Query: 129    ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
              | | |||| ||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 146420 gacgatcgtgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 146361

                                                                          
Query: 189    agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
               |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 146360 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 146301

                                                                          
Query: 249    tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
              |||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||
Sbjct: 146300 tacaattacagctcgaattacttgagatctttctagaggcatttggggcactgcgtcttt 146241

                                                                          
Query: 309    gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
              ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 146240 gattacagcaacaataacatcaccaatacgagcatattgctgattactagcagctcctat 146181

                                                                          
Query: 369    gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
              ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 146180 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 146121

                                                                          
Query: 429    aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146120 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 146061

                                       
Query: 489    tattgtctttccagaaagaaaaacc 513
              |||||||||||||||||||| ||||
Sbjct: 146060 tattgtctttccagaaagaagaacc 146036



 Score =  246 bits (124), Expect = 9e-62
 Identities = 169/184 (91%)
 Strand = Plus / Minus

                                                                          
Query: 550    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 145997 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 145938

                                                                          
Query: 610    gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
              ||||||||||||| |||||| |||||||  ||||||||||||||||| |||| |||||||
Sbjct: 145937 gctgctctagctatagtttcggatactctgcccatttcataaagtattcgacttggttta 145878

                                                                          
Query: 670    acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
              |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 145877 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgtcggt 145818

                  
Query: 730    ctta 733
              ||||
Sbjct: 145817 ctta 145814

to top

>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11,
            complete sequence
          Length = 102567

 Score =  757 bits (382), Expect = 0.0
 Identities = 475/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
            ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 5725 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 5668

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 5667 ttataatacttcaggagctaatgaaactagtttagtaaaattcaattctctcaattcctc 5608

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
            | | |||| ||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 5607 gacgatcgtgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 5548

                                                                        
Query: 189  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5547 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 5488

                                                                        
Query: 249  tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
            |||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||
Sbjct: 5487 tacaattacagctcgaattacttgagatctttctagaggcatttggggcactgcgtcttt 5428

                                                                        
Query: 309  gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
            ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 5427 gattacagcaacaataacatcaccaatacgagcatattgctgattactagcagctcctat 5368

                                                                        
Query: 369  gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
            ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 5367 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 5308

                                                                        
Query: 429  aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5307 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 5248

                                     
Query: 489  tattgtctttccagaaagaaaaacc 513
            |||||||||||||||||||| ||||
Sbjct: 5247 tattgtctttccagaaagaagaacc 5223



 Score =  246 bits (124), Expect = 9e-62
 Identities = 169/184 (91%)
 Strand = Plus / Minus

                                                                        
Query: 550  tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
            ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 5184 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 5125

                                                                        
Query: 610  gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
            ||||||||||||| |||||| |||||||  ||||||||||||||||| |||| |||||||
Sbjct: 5124 gctgctctagctatagtttcggatactctgcccatttcataaagtattcgacttggttta 5065

                                                                        
Query: 670  acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
            |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 5064 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgtcggt 5005

                
Query: 730  ctta 733
            ||||
Sbjct: 5004 ctta 5001

to top

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  757 bits (382), Expect = 0.0
 Identities = 475/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| | ||| ||||||||||| ||  |||||||||||| || ||| ||||||||||
Sbjct: 78980 tatacgtgagacaaaatctactaatttt--ttctttgatctatatctcgtctactagtat 79037

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 79038 ttataatacttcaggagctaatgaaactattttagtcaaattcaattctcttaattcttc 79097

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||||| ||||||||||||||||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 79098 ggcaaccgcgccaaaaactcgagttccttttggatttcctttttgatcaatgataactgc 79157

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              ||||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||
Sbjct: 79158 tgcattgtcatcatagcgtattattataccgtcgtcgcctttgaattctttacgtgtacg 79217

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 79218 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 79277

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 79278 gattacagcaataataacatcaccaatacgagcatatcgctgattaccagcggctcctat 79337

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 79338 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 79397

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 79398 aggttgaatcatattatttggatttccatttgttatttcaatgcaaaaggatgaaagaaa 79457

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||||||||
Sbjct: 79458 tattgtctttccagaaagaaaaacc 79482



 Score =  307 bits (155), Expect = 3e-80
 Identities = 185/195 (94%)
 Strand = Plus / Plus

                                                                         
Query: 539   ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 598
             |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 79509 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 79568

                                                                         
Query: 599   ctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtatac 658
             |||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 79569 ctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtattc 79628

                                                                         
Query: 659   gacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtg 718
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 79629 gacctggtttaacaacggctacccaatattcgggggatccctttcccgagcccatacgtg 79688

                            
Query: 719   tttccgtgggtctta 733
             |||| ||||||||||
Sbjct: 79689 tttctgtgggtctta 79703

to top

>emb|X06734.1|CHZMRP14 Maize chloroplast genes for ribosomal proteins L14, S8 and L16
           partial
          Length = 1287

 Score =  757 bits (382), Expect = 0.0
 Identities = 475/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Minus

                                                                       
Query: 9   tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
           ||||||| | ||| ||||||||||| ||  |||||||||||| || ||| ||||||||||
Sbjct: 689 tatacgtgagacaaaatctactaatttt--ttctttgatctatatctcgtctactagtat 632

                                                                       
Query: 69  ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
           ||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 631 ttataatacttcaggagctaatgaaactattttagtcaaattcaattctcttaattcttc 572

                                                                       
Query: 129 ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
           ||||| ||||||||||||||||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 571 ggcaaccgcgccaaaaactcgagttccttttggatttcctttttgatcaatgataactgc 512

                                                                       
Query: 189 agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
            ||||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||
Sbjct: 511 tgcattgtcatcatagcgtattattataccgtcgtcgcctttgaattctttacgtgtacg 452

                                                                       
Query: 249 tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 451 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 392

                                                                       
Query: 309 gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
           ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 391 gattacagcaataataacatcaccaatacgagcatatcgctgattaccagcggctcctat 332

                                                                       
Query: 369 gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
           ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 331 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 272

                                                                       
Query: 429 aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
           ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 271 aggttgaatcatattatttggatttccatttgttatttcaatgcaaaaggatgaaagaaa 212

                                    
Query: 489 tattgtctttccagaaagaaaaacc 513
           |||||||||||||||||||||||||
Sbjct: 211 tattgtctttccagaaagaaaaacc 187



 Score =  248 bits (125), Expect = 2e-62
 Identities = 149/157 (94%)
 Strand = Plus / Minus

                                                                       
Query: 539 ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 598
           |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 160 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 101

                                                                       
Query: 599 ctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtatac 658
           |||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 100 ctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtattc 41

                                                
Query: 659 gacctggtttaacaacggctacccaatattcggggga 695
           |||||||||||||||||||||||||||||||||||||
Sbjct: 40  gacctggtttaacaacggctacccaatattcggggga 4

to top

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  757 bits (382), Expect = 0.0
 Identities = 475/505 (94%), Gaps = 2/505 (0%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| | ||| ||||||||||| ||  |||||||||||| || ||| ||||||||||
Sbjct: 78996 tatacgtgagacaaaatctactaatttt--ttctttgatctatatctcgtctactagtat 79053

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 79054 ttataatacttcaggagctaatgaaactattttagtcaaattcaattctcttaattcttc 79113

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||||| ||||||||||||||||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 79114 ggcaaccgcgccaaaaactcgagttccttttggatttcctttttgatcaatgataactgc 79173

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              ||||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||
Sbjct: 79174 tgcattgtcatcatagcgtattattataccgtcgtcgcctttgaattctttacgtgtacg 79233

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 79234 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcgtcttt 79293

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 79294 gattacagcaataataacatcaccaatacgagcatatcgctgattaccagcggctcctat 79353

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 79354 gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 79413

                                                                         
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaa 488
             ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 79414 aggttgaatcatattatttggatttccatttgttatttcaatgcaaaaggatgaaagaaa 79473

                                      
Query: 489   tattgtctttccagaaagaaaaacc 513
             |||||||||||||||||||||||||
Sbjct: 79474 tattgtctttccagaaagaaaaacc 79498



 Score =  307 bits (155), Expect = 3e-80
 Identities = 185/195 (94%)
 Strand = Plus / Plus

                                                                         
Query: 539   ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 598
             |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 79525 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 79584

                                                                         
Query: 599   ctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtatac 658
             |||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 79585 ctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtattc 79644

                                                                         
Query: 659   gacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtg 718
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 79645 gacctggtttaacaacggctacccaatattcgggggatccctttcccgagcccatacgtg 79704

                            
Query: 719   tttccgtgggtctta 733
             |||| ||||||||||
Sbjct: 79705 tttctgtgggtctta 79719

to top

>ref|NM_190859.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 372

 Score =  618 bits (312), Expect = e-174
 Identities = 357/372 (95%)
 Strand = Plus / Minus

                                                                       
Query: 69  ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 372 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 313

                                                                       
Query: 129 ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
           ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 312 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 253

                                                                       
Query: 189 agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
            |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 252 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 193

                                                                       
Query: 249 tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 192 tacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcatcttt 133

                                                                       
Query: 309 gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 132 gattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctcctat 73

                                                                       
Query: 369 gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
           ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 72  gactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctg 13

                       
Query: 429 aggttgaatcat 440
           ||||||||||||
Sbjct: 12  aggttgaatcat 1

to top

>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete
             sequence
          Length = 141691

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                         
Query: 202   tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 261
             ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 14317 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 14376

                                                                         
Query: 262   cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 321
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 14377 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 14436

                                                                         
Query: 322   ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 381
             |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 14437 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 14496

                                                                         
Query: 382   atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 441
             |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 14497 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 14556

                                                                         
Query: 442   ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 501
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 14557 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 14616

                 
Query: 502   gaaa 505
             ||||
Sbjct: 14617 gaaa 14620



 Score =  246 bits (124), Expect = 9e-62
 Identities = 169/184 (91%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| ||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 14667 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagctatggaaata 14726

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             |||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||
Sbjct: 14727 gctgctctagctacagtttcggatactccgcccatttcataaagtattctacctggttta 14786

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 14787 acaatggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgttggt 14846

                 
Query: 730   ctta 733
             ||||
Sbjct: 14847 ctta 14850



 Score =  222 bits (112), Expect = 1e-54
 Identities = 176/195 (90%), Gaps = 3/195 (1%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 13947 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 14004

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| 
Sbjct: 14005 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattccta 14064

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || ||||||| |||||| ||||||||
Sbjct: 14065 ggcgatcgcgccaaaaacgcgagttccttttggatttccttttt-atcaatgataaccgc 14123

                            
Query: 189   agcattgtcatcata 203
              |||||||| |||||
Sbjct: 14124 tgcattgtcgtcata 14138

to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                            
Query: 202      tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 261
                ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 24638131 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 24638190

                                                                            
Query: 262      cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 321
                ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 24638191 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 24638250

                                                                            
Query: 322      ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 381
                |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 24638251 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 24638310

                                                                            
Query: 382      atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 441
                |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 24638311 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 24638370

                                                                            
Query: 442      ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 501
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 24638371 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 24638430

                    
Query: 502      gaaa 505
                ||||
Sbjct: 24638431 gaaa 24638434



 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                            
Query: 192      attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 251
                |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32000439 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 32000498

                                                                            
Query: 252      aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 311
                ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 32000499 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 32000558

                                                                            
Query: 312      tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 371
                |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 32000559 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 32000618

                                                                            
Query: 372      tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 431
                |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 32000619 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 32000678

                                                         
Query: 432      ttgaatcatattattttgatttcaatttgttatttcaatgc 472
                |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 32000679 ttgaatcatattattttgattttaatttgttatttcaatgc 32000719



 Score =  246 bits (124), Expect = 9e-62
 Identities = 169/184 (91%)
 Strand = Plus / Plus

                                                                            
Query: 550      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
                ||||| ||||| |||| ||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 24638481 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagctatggaaata 24638540

                                                                            
Query: 610      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
                |||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||
Sbjct: 24638541 gctgctctagctacagtttcggatactccgcccatttcataaagtattctacctggttta 24638600

                                                                            
Query: 670      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
                |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 24638601 acaatggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgttggt 24638660

                    
Query: 730      ctta 733
                ||||
Sbjct: 24638661 ctta 24638664



 Score =  222 bits (112), Expect = 1e-54
 Identities = 176/195 (90%), Gaps = 3/195 (1%)
 Strand = Plus / Plus

                                                                            
Query: 9        tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
                ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 24637761 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 24637818

                                                                            
Query: 69       ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| 
Sbjct: 24637819 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattccta 24637878

                                                                            
Query: 129      ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
                ||| |||||||||||||| |||||||||||||| || ||||||| |||||| ||||||||
Sbjct: 24637879 ggcgatcgcgccaaaaacgcgagttccttttggatttccttttt-atcaatgataaccgc 24637937

                               
Query: 189      agcattgtcatcata 203
                 |||||||| |||||
Sbjct: 24637938 tgcattgtcgtcata 24637952



 Score =  163 bits (82), Expect = 1e-36
 Identities = 143/162 (88%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 72       taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 131
                |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 27557409 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 27557468

                                                                            
Query: 132      aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 191
                 || || |||||||| | |||||| ||||| || ||||||| |||||| ||||||| |||
Sbjct: 27557469 gattgcaccaaaaacgcaagttccatttggatttccttttt-atcaatgataaccgtagc 27557527

                                                          
Query: 192      attgtcatcatagcggattattataccgtcttcgcatttgaa 233
                | |||| |||||||| |||||||||| |||||||||||||||
Sbjct: 27557528 actgtcgtcatagcgtattattatactgtcttcgcatttgaa 27557569

to top

>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136470

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                         
Query: 202   tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 261
             ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 70177 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 70236

                                                                         
Query: 262   cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 321
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 70237 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 70296

                                                                         
Query: 322   ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 381
             |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 70297 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 70356

                                                                         
Query: 382   atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 441
             |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 70357 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 70416

                                                                         
Query: 442   ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 501
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 70417 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 70476

                 
Query: 502   gaaa 505
             ||||
Sbjct: 70477 gaaa 70480



 Score =  246 bits (124), Expect = 9e-62
 Identities = 169/184 (91%)
 Strand = Plus / Plus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| ||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 70527 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagctatggaaata 70586

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             |||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||
Sbjct: 70587 gctgctctagctacagtttcggatactccgcccatttcataaagtattctacctggttta 70646

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 70647 acaatggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgttggt 70706

                 
Query: 730   ctta 733
             ||||
Sbjct: 70707 ctta 70710



 Score =  222 bits (112), Expect = 1e-54
 Identities = 176/195 (90%), Gaps = 3/195 (1%)
 Strand = Plus / Plus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 69807 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 69864

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| 
Sbjct: 69865 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattccta 69924

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || ||||||| |||||| ||||||||
Sbjct: 69925 ggcgatcgcgccaaaaacgcgagttccttttggatttccttttt-atcaatgataaccgc 69983

                            
Query: 189   agcattgtcatcata 203
              |||||||| |||||
Sbjct: 69984 tgcattgtcgtcata 69998

to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                            
Query: 202      tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 261
                ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 24555600 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 24555659

                                                                            
Query: 262      cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 321
                ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 24555660 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 24555719

                                                                            
Query: 322      ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 381
                |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 24555720 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 24555779

                                                                            
Query: 382      atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 441
                |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 24555780 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 24555839

                                                                            
Query: 442      ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 501
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 24555840 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 24555899

                    
Query: 502      gaaa 505
                ||||
Sbjct: 24555900 gaaa 24555903



 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                            
Query: 192      attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 251
                |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32090951 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 32091010

                                                                            
Query: 252      aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 311
                ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 32091011 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 32091070

                                                                            
Query: 312      tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 371
                |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 32091071 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 32091130

                                                                            
Query: 372      tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 431
                |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 32091131 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 32091190

                                                         
Query: 432      ttgaatcatattattttgatttcaatttgttatttcaatgc 472
                |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 32091191 ttgaatcatattattttgattttaatttgttatttcaatgc 32091231



 Score =  246 bits (124), Expect = 9e-62
 Identities = 169/184 (91%)
 Strand = Plus / Plus

                                                                            
Query: 550      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
                ||||| ||||| |||| ||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 24555950 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagctatggaaata 24556009

                                                                            
Query: 610      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
                |||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||
Sbjct: 24556010 gctgctctagctacagtttcggatactccgcccatttcataaagtattctacctggttta 24556069

                                                                            
Query: 670      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
                |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 24556070 acaatggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgttggt 24556129

                    
Query: 730      ctta 733
                ||||
Sbjct: 24556130 ctta 24556133



 Score =  222 bits (112), Expect = 1e-54
 Identities = 176/195 (90%), Gaps = 3/195 (1%)
 Strand = Plus / Plus

                                                                            
Query: 9        tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
                ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 24555230 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 24555287

                                                                            
Query: 69       ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| 
Sbjct: 24555288 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattccta 24555347

                                                                            
Query: 129      ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
                ||| |||||||||||||| |||||||||||||| || ||||||| |||||| ||||||||
Sbjct: 24555348 ggcgatcgcgccaaaaacgcgagttccttttggatttccttttt-atcaatgataaccgc 24555406

                               
Query: 189      agcattgtcatcata 203
                 |||||||| |||||
Sbjct: 24555407 tgcattgtcgtcata 24555421



 Score =  163 bits (82), Expect = 1e-36
 Identities = 143/162 (88%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 72       taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 131
                |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 27648732 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 27648791

                                                                            
Query: 132      aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 191
                 || || |||||||| | |||||| ||||| || ||||||| |||||| ||||||| |||
Sbjct: 27648792 gattgcaccaaaaacgcaagttccatttggatttccttttt-atcaatgataaccgtagc 27648850

                                                          
Query: 192      attgtcatcatagcggattattataccgtcttcgcatttgaa 233
                | |||| |||||||| |||||||||| |||||||||||||||
Sbjct: 27648851 actgtcgtcatagcgtattattatactgtcttcgcatttgaa 27648892

to top

>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete
             sequence
          Length = 144306

 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                         
Query: 192   attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 251
             |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92391 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 92450

                                                                         
Query: 252   aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 311
             ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 92451 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 92510

                                                                         
Query: 312   tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 371
             |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 92511 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 92570

                                                                         
Query: 372   tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 431
             |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 92571 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 92630

                                                      
Query: 432   ttgaatcatattattttgatttcaatttgttatttcaatgc 472
             |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 92631 ttgaatcatattattttgattttaatttgttatttcaatgc 92671

to top

>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence,
            complete sequence
          Length = 178158

 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                        
Query: 192  attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 251
            |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 1623

                                                                        
Query: 252  aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 311
            ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 1624 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 1683

                                                                        
Query: 312  tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 371
            |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1684 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 1743

                                                                        
Query: 372  tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 431
            |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1744 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 1803

                                                     
Query: 432  ttgaatcatattattttgatttcaatttgttatttcaatgc 472
            |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1804 ttgaatcatattattttgattttaatttgttatttcaatgc 1844

to top

>gb|DQ069425.1| Typha latifolia ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  402 bits (203), Expect = e-109
 Identities = 325/365 (89%), Gaps = 3/365 (0%)
 Strand = Plus / Minus

                                                                       
Query: 76  acttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatc 135
           |||||||||||||||||||||||||| ||||||||||| | ||||||||||   || |||
Sbjct: 362 acttcaggagctaatgaaactattttagtaaaattcaactgtctcaattcccgagcgatc 303

                                                                       
Query: 136 gcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattg 195
           || ||||||||||||||||||||||| || |||| ||||||||| | ||| |||||||||
Sbjct: 302 gcaccaaaaactcgagttccttttggatttccttcttgatcaatgacaactgcagcattg 243

                                                                       
Query: 196 tcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaatt 255
           |||||||| || ||||| ||||||| ||| | ||||| ||||||||||||||||||||||
Sbjct: 242 tcatcatatcgtattatgataccgttttcacgtttgagttctttacatgtacgtacaatt 183

                                                                       
Query: 256 acagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattaca 315
           ||||||| ||||||||| ||||||||||||||||| | ||| | ||| ||||||||||||
Sbjct: 182 acagctctaattacttctgatctttctagaggcatattgggaactgcttctttgattaca 123

                                                                       
Query: 316 gcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcga 375
           ||||||||||||||||||||| |||||||||| |||||||   |||||||||||| ||||
Sbjct: 122 gcaacaataacatcaccaatatgagcatatcggtgattac---cagctcctatgattcga 66

                                                                       
Query: 376 atacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttga 435
           |||||||| |||||||||||||| || || || |||||||| ||||||||||||||||||
Sbjct: 65  atacacattaattttcgagctccgctgttatccgctacattcaaaagggtctgaggttga 6

                
Query: 436 atcat 440
           |||||
Sbjct: 5   atcat 1

to top

>gb|DQ069426.1| Yucca schidigera ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  387 bits (195), Expect = e-104
 Identities = 326/369 (88%), Gaps = 3/369 (0%)
 Strand = Plus / Minus

                                                                       
Query: 72  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 131
           |||||| || |||||||||||||||||||| ||||||||||| | ||||||||||   ||
Sbjct: 366 taatacctcgggagctaatgaaactattttagtaaaattcaactgtctcaattcccgagc 307

                                                                       
Query: 132 aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 191
           |||||| ||||||| |||||||||||||||||| |||| ||||||||| | |||||| ||
Sbjct: 306 aatcgccccaaaaattcgagttccttttgggtttccttcttgatcaatgacaaccgctgc 247

                                                                       
Query: 192 attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 251
           |||||||||||| || ||||| |||||||  || | ||||| ||||||||||||||||||
Sbjct: 246 attgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtac 187

                                                                       
Query: 252 aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 311
           ||||||||||| ||||||||| ||||||||||||||||| | ||||| ||| ||||||||
Sbjct: 186 aattacagctctaattacttctgatctttctagaggcatattgggcactgcttctttgat 127

                                                                       
Query: 312 tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 371
           ||||||||||||||| ||||||||| |||||||||| |||||||   |||| ||||||| 
Sbjct: 126 tacagcaacaataacgtcaccaatatgagcatatcggtgattac---cagcccctatgat 70

                                                                       
Query: 372 tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 431
           ||||||||||||||||| ||||||||| || || ||||||||||| |||||||| |||||
Sbjct: 69  tcgaatacacatcaattctcgagctccgctgttatctgctacattcaaaagggtttgagg 10

                    
Query: 432 ttgaatcat 440
           |||||||||
Sbjct: 9   ttgaatcat 1

to top

>emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa0005K20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 143618

 Score =  385 bits (194), Expect = e-103
 Identities = 254/273 (93%), Gaps = 2/273 (0%)
 Strand = Plus / Minus

                                                                         
Query: 9     tatacgtaaaacacaatctactaatattaattctttgatctaaatttcgcctactagtat 68
             ||||||| ||||||||||||||||| ||  || ||||||||| || | | ||||||||||
Sbjct: 79068 tatacgtgaaacacaatctactaatttt--ttatttgatctatatcttgtctactagtat 79011

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 79010 ttataatacttcaggagctaatgaaactattttagtaaaattcaattctctcaattcctc 78951

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| |||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 78950 ggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccgc 78891

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 78890 tgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtacg 78831

                                              
Query: 249   tacaattacagctcgaattacttcggatctttc 281
             |||||||||||||||||||||||||||||||||
Sbjct: 78830 tacaattacagctcgaattacttcggatctttc 78798

to top

>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0059G01, complete sequence
          Length = 141661

 Score =  351 bits (177), Expect = 2e-93
 Identities = 195/201 (97%)
 Strand = Plus / Minus

                                                                         
Query: 183   aaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttaca 242
             |||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 23399 aaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttaca 23340

                                                                         
Query: 243   tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 302
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 23339 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 23280

                                                                         
Query: 303   gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagc 362
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23279 gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagc 23220

                                  
Query: 363   tcctatgactcgaatacacat 383
             |||||||||||||||||||||
Sbjct: 23219 tcctatgactcgaatacacat 23199



 Score =  174 bits (88), Expect = 3e-40
 Identities = 235/280 (83%), Gaps = 3/280 (1%)
 Strand = Plus / Plus

                                                                         
Query: 88    aatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaact 147
             ||||||| ||||||  || |||||||||||||||||||| |||| |||  ||||||||| 
Sbjct: 96297 aatgaaattattttaatacaattcaattctctcaattcc-cggcgatcatgccaaaaacg 96355

                                                                         
Query: 148   cgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcgg 207
              |||| || ||||| || | ||||||||| || |||||||  | ||  ||  ||||||| 
Sbjct: 96356 tgagtgccctttggatttcttttttgatcgatgataaccgttgtata-tcggcatagcgt 96414

                                                                         
Query: 208   attattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaatt 267
             |||||||||| || ||| |||||||| ||||||||||||| || ||||||  ||| ||||
Sbjct: 96415 attattatactgt-ttcacatttgaactctttacatgtacatataattacttctctaatt 96473

                                                                         
Query: 268   acttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaataaca 327
             |||| || ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 96474 actttgggtctttctagaggcatttggggcactgcatctttcattacagcaacaataaca 96533

                                                     
Query: 328   tcaccaatacgagcatatcgctgattaccagcagctccta 367
             ||| ||||| |||||||| | ||||||| |||||| ||||
Sbjct: 96534 tcatcaatatgagcatattgttgattactagcagcaccta 96573



 Score =  107 bits (54), Expect = 5e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                         
Query: 410   ctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaa 469
             |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 96608 ctacatttaaaagggtttgaggttgaatcatattattttgatgtcaatttgttatttcaa 96667

               
Query: 470   tg 471
             ||
Sbjct: 96668 tg 96669

to top

>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16,
              complete sequence
          Length = 159525

 Score =  351 bits (177), Expect = 2e-93
 Identities = 195/201 (97%)
 Strand = Plus / Minus

                                                                          
Query: 183    aaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttaca 242
              |||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 130171 aaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttaca 130112

                                                                          
Query: 243    tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 302
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 130111 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 130052

                                                                          
Query: 303    gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagc 362
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 130051 gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagc 129992

                                   
Query: 363    tcctatgactcgaatacacat 383
              |||||||||||||||||||||
Sbjct: 129991 tcctatgactcgaatacacat 129971

to top

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  349 bits (176), Expect = 8e-93
 Identities = 337/390 (86%), Gaps = 3/390 (0%)
 Strand = Plus / Plus

                                                                         
Query: 59    ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattcaattctc 118
             |||||||||||||||| |||||||| |||||||| |||||||| || ||||| || | ||
Sbjct: 81909 ctactagtatttataagacttcaggggctaatgagactattttagtgaaatttaactttc 81968

                                                                         
Query: 119   tcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaa 178
             ||||||||   |||||||| ||||||||||||||||||||||| || |||| ||||||||
Sbjct: 81969 tcaattcccgagcaatcgctccaaaaactcgagttccttttggatttccttcttgatcaa 82028

                                                                         
Query: 179   ttataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctt 238
             | | ||| || |||||||||||||| || ||||| |||||||  |||| ||||| |||||
Sbjct: 82029 tgacaactgccgcattgtcatcatatcgtattatcataccgttgtcgcgtttgagttctt 82088

                                                                         
Query: 239   tacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggca 298
             |||||||||||||||||||||||||||| ||||| |||||||| |||||||| | |||||
Sbjct: 82089 tacatgtacgtacaattacagctcgaataacttctgatctttcgagaggcatattgggca 82148

                                                                         
Query: 299   atgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccag 358
              ||| ||||||||||||||||||||||| ||||| ||| ||||||||||  ||||||   
Sbjct: 82149 ctgcttctttgattacagcaacaataacgtcaccgatatgagcatatcggcgattac--- 82205

                                                                         
Query: 359   cagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattta 418
              ||| ||||||| |||||| |||||||||| |||||| || || ||||| |||||||| |
Sbjct: 82206 tagcccctatgattcgaatgcacatcaattctcgagccccgctgttgtccgctacattca 82265

                                           
Query: 419   aaagggtctgaggttgaatcatattatttt 448
             || ||||||||||||||||||||| |||||
Sbjct: 82266 aatgggtctgaggttgaatcatatcatttt 82295



 Score =  163 bits (82), Expect = 1e-36
 Identities = 145/166 (87%)
 Strand = Plus / Plus

                                                                         
Query: 568   aattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagtt 627
             |||||| ||||||| |||||||| |  || ||||| || ||||| ||||| |||||||||
Sbjct: 82437 aattgagttcgtataggcattttgcacgcagctattgaaatagccgctctggctacagtt 82496

                                                                         
Query: 628   tcagatactccccccatttcataaagtatacgacctggtttaacaacggctacccaatat 687
             || |||||||| ||||||||||||||||| |||||||||||||| || | ||||||||||
Sbjct: 82497 tcggatactccgcccatttcataaagtattcgacctggtttaacgacagatacccaatat 82556

                                                           
Query: 688   tcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
             |||||||| || || ||||| ||||||||||||||||| |||||||
Sbjct: 82557 tcgggggatcctttccccgaacccatacgtgtttccgtaggtctta 82602

to top

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  323 bits (163), Expect = 5e-85
 Identities = 344/401 (85%), Gaps = 5/401 (1%)
 Strand = Plus / Plus

                                                                         
Query: 70    tataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg 129
             ||||| ||||| || ||||||||||| ||||| ||||||||||| | || |||||| |||
Sbjct: 82583 tataagacttcgggtgctaatgaaacgattttagtaaaattcaactgtcgcaattc-tcg 82641

                                                                         
Query: 130   -gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
              ||||| || ||||||| ||||||||||||||| || |||| ||||||||| ||||||||
Sbjct: 82642 agcaattgcaccaaaaattcgagttccttttggatttccttcttgatcaatgataaccgc 82701

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||||||||| || ||||| || ||||  || | ||||| |||||||||||| ||
Sbjct: 82702 tgcattgtcatcatatcgtattatcatgccgttgtcacgtttgagttctttacatgtgcg 82761

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||| ||||||| ||||| ||| ||||||||||||||||| | ||||| ||| |||||
Sbjct: 82762 tacaatcacagctctaattatttctgatctttctagaggcatgttgggcactgcttcttt 82821

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||||||||||||||||||||| |||| | |||||||||| |||||||   ||| ||||||
Sbjct: 82822 gattacagcaacaataacatcgccaagatgagcatatcggtgattac---cagttcctat 82878

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             || |||||||||||| |||||| |||||||||| || || |||||||| |||||||||||
Sbjct: 82879 gattcgaatacacattaatttttgagctccactgttatccgctacattcaaaagggtctg 82938

                                                      
Query: 429   aggttgaatcatattattttgatttcaatttgttatttcaa 469
             |||||||||||||| ||||| | || ||| | |||||||||
Sbjct: 82939 aggttgaatcatatcatttttaatttaatctcttatttcaa 82979



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                         
Query: 619   gctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggct 678
             ||||||| |||||||||||| | ||||||||||| ||| || || ||||||||||||| |
Sbjct: 83144 gctacagcttcagatactccactcatttcataaattattcggcccggtttaacaacggat 83203

                                                                    
Query: 679   acccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
             ||||||||||||||||| || || || || |||||||||||||| || |||||||
Sbjct: 83204 acccaatattcgggggatcctttgccggaacccatacgtgtttctgtaggtctta 83258

to top

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  319 bits (161), Expect = 7e-84
 Identities = 328/383 (85%), Gaps = 3/383 (0%)
 Strand = Plus / Plus

                                                                         
Query: 66    tatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattc 125
             |||||||||||| ||||||||||  ||||||||||| || |||||||| | |||||||||
Sbjct: 80435 tatttataatacctcaggagctagggaaactattttagtgaaattcaaatgtctcaattc 80494

                                                                         
Query: 126   ctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataac 185
             |   || ||||| ||||||||||||||||||||||| || |||| ||||||||| | |||
Sbjct: 80495 ccgagcgatcgcaccaaaaactcgagttccttttggattcccttcttgatcaatgacaac 80554

                                                                         
Query: 186   cgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgt 245
              || |||||||||||||| || ||||| |||||||  || | ||||| ||||||||||||
Sbjct: 80555 tgctgcattgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacatgt 80614

                                                                         
Query: 246   acgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtc 305
             |||||||||||||||||  |  ||||| ||||||||||||| ||| | ||| | ||| ||
Sbjct: 80615 acgtacaattacagctctgaccacttctgatctttctagagacatattgggtactgcttc 80674

                                                                         
Query: 306   tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 365
             ||||||||||||||||||||| ||||||||| ||||||||||  ||||||     |||||
Sbjct: 80675 tttgattacagcaacaataacgtcaccaatatgagcatatcggcgattac---tggctcc 80731

                                                                         
Query: 366   tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 425
             ||||| ||||||||||||||||| |||||| || || || || |||||||||||||||||
Sbjct: 80732 tatgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaaagggt 80791

                                    
Query: 426   ctgaggttgaatcatattatttt 448
             ||||||||||||||||| |||||
Sbjct: 80792 ctgaggttgaatcatatcatttt 80814



 Score =  149 bits (75), Expect = 2e-32
 Identities = 114/127 (89%)
 Strand = Plus / Plus

                                                                         
Query: 607   atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
             ||||| ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||| |||
Sbjct: 81003 atagcggctctggctacagtttctgatactccacccatctcataaagtattcgacccggt 81062

                                                                         
Query: 667   ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 726
             |||||||||| |||||| ||||||||||| ||||| ||||| |||||||||||||||| |
Sbjct: 81063 ttaacaacggatacccagtattcgggggatcccttccccgaacccatacgtgtttccgcg 81122

                    
Query: 727   ggtctta 733
             |||||||
Sbjct: 81123 ggtctta 81129

to top

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  307 bits (155), Expect = 3e-80
 Identities = 319/373 (85%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82356 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82415

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 82416 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 82475

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             |||||||||||||||| |||||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82476 cagcattgtcatcatatcggattatcatcccgttgtcacgtttgagttctttacaggtac 82535

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82536 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82595

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82596 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82652

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82653 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82712

                          
Query: 428   gaggttgaatcat 440
             |||||||||||||
Sbjct: 82713 gaggttgaatcat 82725



 Score =  107 bits (54), Expect = 5e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| ||||||||||||||||| || || ||||||||||| |||||||||||||| ||
Sbjct: 82928 tactccacccatttcataaagtattcgccccggtttaacaacagctacccaatattcagg 82987

                                                       
Query: 693   ggacccctttcccgagcccatacgtgtttccgtgggtcttag 734
             ||| || ||||| || |||||||||||||| | |||||||||
Sbjct: 82988 ggatccttttcctgaacccatacgtgtttctgcgggtcttag 83029

to top

>gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA
          Length = 1368

 Score =  307 bits (155), Expect = 3e-80
 Identities = 185/195 (94%)
 Strand = Plus / Minus

                                                                        
Query: 539  ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 598
            |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 1068 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 1009

                                                                        
Query: 599  ctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtatac 658
            |||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 1008 ctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtattc 949

                                                                        
Query: 659  gacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtg 718
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 948  gacctggtttaacaacggctacccaatattcgggggatccctttcccgagcccatacgtg 889

                           
Query: 719  tttccgtgggtctta 733
            |||| ||||||||||
Sbjct: 888  tttctgtgggtctta 874



 Score =  194 bits (98), Expect = 3e-46
 Identities = 104/106 (98%)
 Strand = Plus / Minus

                                                                        
Query: 243  tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 302
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1365 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 1306

                                                          
Query: 303  gtctttgattacagcaacaataacatcaccaatacgagcatatcgc 348
            ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1305 gtctttgattacagcaataataacatcaccaatacgagcatatcgc 1260



 Score =  161 bits (81), Expect = 4e-36
 Identities = 101/105 (96%), Gaps = 2/105 (1%)
 Strand = Plus / Minus

                                                                        
Query: 409  gctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttca 468
            ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 1199 gctacatttaaaagggtctgaggttgaatcatattatttgg-tttccatttgttatttca 1141

                                                         
Query: 469  a-tgcaaaaggatgaaagaaatattgtctttccagaaagaaaaac 512
            | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 aatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaac 1096



 Score =  107 bits (54), Expect = 5e-20
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                        
Query: 287  gcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcatatc 346
            |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1261 gcatttggggcactgcgtctttgattacagcaataataacatcaccaatacgagcatatc 1202

              
Query: 347  gc 348
            ||
Sbjct: 1201 gc 1200

to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  305 bits (154), Expect = 1e-79
 Identities = 184/194 (94%)
 Strand = Plus / Minus

                                                                            
Query: 320      caataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatac 379
                |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 24916826 caattacatcaccaatacgagcatatcgctgattactagcagctcctatgacttgaatac 24916767

                                                                            
Query: 380      acatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatca 439
                |||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
Sbjct: 24916766 acattaattttcgagctccactattatctgctacatttaaaagggtctgaggttaaatta 24916707

                                                                            
Query: 440      tattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttc 499
                ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 24916706 tattattttgatttcaatttgctatttcaatgcaaaaagatgaaagaaatattgtctttc 24916647

                              
Query: 500      cagaaagaaaaacc 513
                ||||||||| ||||
Sbjct: 24916646 cagaaagaagaacc 24916633



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                            
Query: 550      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 24916596 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 24916537

                                                                            
Query: 610      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 24916536 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 24916477

                                                                            
Query: 670      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
                |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||
Sbjct: 24916476 acaacggctacccaatattcggtggatccctttcccgaacccatacgtgtttccgtcggt 24916417

                    
Query: 730      ctta 733
                ||||
Sbjct: 24916416 ctta 24916413



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                            
Query: 123      ttcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattat 182
                ||||||||| |||| ||||||||| |||||||||||||| || | ||||||| |||| ||
Sbjct: 20875041 ttcctcggcgatcgtgccaaaaacgcgagttccttttggatttcttttttgaccaatgat 20875100

                                  
Query: 183      aaccgcagcattgtcatc 200
                |||||  |||||||||||
Sbjct: 20875101 aaccgttgcattgtcatc 20875118



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 104      taaaattcaattctctcaattcctcggcaatcgcgccaaaaac 146
                ||||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 32000475 taaaattcaatactctcgattcctcggcgatcgcgccaaaaac 32000433

to top

>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1215B07
          Length = 165957

 Score =  305 bits (154), Expect = 1e-79
 Identities = 184/194 (94%)
 Strand = Plus / Minus

                                                                         
Query: 320   caataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatac 379
             |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 78109 caattacatcaccaatacgagcatatcgctgattactagcagctcctatgacttgaatac 78050

                                                                         
Query: 380   acatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatca 439
             |||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
Sbjct: 78049 acattaattttcgagctccactattatctgctacatttaaaagggtctgaggttaaatta 77990

                                                                         
Query: 440   tattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttc 499
             ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 77989 tattattttgatttcaatttgctatttcaatgcaaaaagatgaaagaaatattgtctttc 77930

                           
Query: 500   cagaaagaaaaacc 513
             ||||||||| ||||
Sbjct: 77929 cagaaagaagaacc 77916



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77879 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77820

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 77819 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 77760

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||
Sbjct: 77759 acaacggctacccaatattcggtggatccctttcccgaacccatacgtgtttccgtcggt 77700

                 
Query: 730   ctta 733
             ||||
Sbjct: 77699 ctta 77696

to top

>gb|DQ069421.1| Acorus americanus ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  299 bits (151), Expect = 7e-78
 Identities = 315/369 (85%), Gaps = 3/369 (0%)
 Strand = Plus / Minus

                                                                       
Query: 72  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 131
           |||||| ||||||||||  ||||||||||| || |||||||| | ||||||||||   ||
Sbjct: 366 taatacctcaggagctagggaaactattttagtgaaattcaaatgtctcaattcccgagc 307

                                                                       
Query: 132 aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 191
            ||||| ||||||||||||||||||||||| || |||| ||||||||| | ||| || ||
Sbjct: 306 gatcgcaccaaaaactcgagttccttttggattcccttcttgatcaatgacaactgctgc 247

                                                                       
Query: 192 attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 251
           |||||||||||| || ||||| |||||||  || | ||||| ||||||||||||||||||
Sbjct: 246 attgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtac 187

                                                                       
Query: 252 aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 311
           |||||||||||  |  ||||| ||||||||||||| ||| | ||| | ||| ||||||||
Sbjct: 186 aattacagctctgaccacttctgatctttctagagacatattgggtactgcttctttgat 127

                                                                       
Query: 312 tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 371
           ||||||||||||||| ||||||||| ||||||||||  ||||||     |||||||||| 
Sbjct: 126 tacagcaacaataacgtcaccaatatgagcatatcggcgattac---tggctcctatgat 70

                                                                       
Query: 372 tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 431
           ||||||||||||||||| |||||| || || || || |||||||||||||||||||||||
Sbjct: 69  tcgaatacacatcaattctcgagccccgctgttatccgctacatttaaaagggtctgagg 10

                    
Query: 432 ttgaatcat 440
           |||||||||
Sbjct: 9   ttgaatcat 1

to top

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  299 bits (151), Expect = 7e-78
 Identities = 324/381 (85%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||| || |||||||||||||||||||| |||||||| || | |||||||||  
Sbjct: 80082 tttataatacctcgggagctaatgaaactattttagtaaaattgaactgtctcaattctc 80141

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              ||||||||| |||||||| |||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 80142 gggcaatcgcaccaaaaacgcgagttccttttggatttccttcttgatcaatcacaactg 80201

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             |||||||||||||||| || ||||| |||||||  || | ||| | ||||||||| ||||
Sbjct: 80202 cagcattgtcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtac 80261

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             | |||||||||||||  |  ||||| ||||||||||||||||| |  || | ||||||||
Sbjct: 80262 ggacaattacagctctgaccacttctgatctttctagaggcatgtttggaactgcgtctt 80321

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 80322 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 80378

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| ||||||||||||||||| |||||| || || || ||||||||||| ||| ||||||
Sbjct: 80379 tgattcgaatacacatcaattctcgagccccgctgttatctgctacattcaaatgggtct 80438

                                  
Query: 428   gaggttgaatcatattatttt 448
             ||||||||||||||| |||||
Sbjct: 80439 gaggttgaatcatatcatttt 80459



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||||
Sbjct: 80655 tactccacccatttcataaaggattcgacctggtttaacaacagctacccaatattcggg 80714

                                           
Query: 693   ggacccctttcccgagcccatacgtgtttc 722
              || || || || || ||||||||||||||
Sbjct: 80715 agagcctttacctgaacccatacgtgtttc 80744

to top

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  299 bits (151), Expect = 7e-78
 Identities = 318/373 (85%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82305 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82364

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              ||| || || ||||||| ||||||||| ||||| || |||| ||||||||| | ||| |
Sbjct: 82365 gggcgattgcaccaaaaattcgagttccctttggatttccttcttgatcaataacaactg 82424

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             |||||||||||||||| |||||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82425 cagcattgtcatcatatcggattatcatcccgttgtcacgtttgagttctttacaggtac 82484

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82485 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82544

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82545 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82601

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82602 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82661

                          
Query: 428   gaggttgaatcat 440
             |||||||||||||
Sbjct: 82662 gaggttgaatcat 82674



 Score =  107 bits (54), Expect = 5e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| ||||||||||||||||| || || ||||||||||| |||||||||||||| ||
Sbjct: 82882 tactccacccatttcataaagtattcgccccggtttaacaacagctacccaatattcagg 82941

                                                       
Query: 693   ggacccctttcccgagcccatacgtgtttccgtgggtcttag 734
             ||| || ||||| || |||||||||||||| | |||||||||
Sbjct: 82942 ggatccttttcctgaacccatacgtgtttctgcgggtcttag 82983

to top

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  299 bits (151), Expect = 7e-78
 Identities = 318/373 (85%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82317 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82376

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              ||| || || ||||||| ||||||||| ||||| || |||| ||||||||| | ||| |
Sbjct: 82377 gggcgattgcaccaaaaattcgagttccctttggatttccttcttgatcaataacaactg 82436

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             |||||||||||||||| |||||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82437 cagcattgtcatcatatcggattatcatcccgttgtcacgtttgagttctttacaggtac 82496

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82497 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82556

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82557 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82613

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82614 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82673

                          
Query: 428   gaggttgaatcat 440
             |||||||||||||
Sbjct: 82674 gaggttgaatcat 82686



 Score =  107 bits (54), Expect = 5e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| ||||||||||||||||| || || ||||||||||| |||||||||||||| ||
Sbjct: 82894 tactccacccatttcataaagtattcgccccggtttaacaacagctacccaatattcagg 82953

                                                       
Query: 693   ggacccctttcccgagcccatacgtgtttccgtgggtcttag 734
             ||| || ||||| || |||||||||||||| | |||||||||
Sbjct: 82954 ggatccttttcctgaacccatacgtgtttctgcgggtcttag 82995

to top

>gb|DQ069423.1| Nuphar advena ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  291 bits (147), Expect = 2e-75
 Identities = 314/369 (85%), Gaps = 3/369 (0%)
 Strand = Plus / Minus

                                                                       
Query: 72  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 131
           ||||||||| ||||||||||| ||||| || || ||||| || | |||||||||    ||
Sbjct: 366 taatacttcgggagctaatgagactatcttagtgaaatttaactgtctcaattcacgagc 307

                                                                       
Query: 132 aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 191
           |||||  |||||||||||||| |||||||| || |||| ||||||||| | ||| || ||
Sbjct: 306 aatcgaaccaaaaactcgagtgccttttggatttccttcttgatcaatgacaactgctgc 247

                                                                       
Query: 192 attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 251
           |||||||||||| || ||||| |||||||  |||| ||||| ||||||||||||||||||
Sbjct: 246 attgtcatcataccgtattatcataccgttgtcgcgtttgagttctttacatgtacgtac 187

                                                                       
Query: 252 aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 311
           |||||||||||  |||||||| |||||||| || ||||| |  |||| ||| ||||||||
Sbjct: 186 aattacagctctgattacttctgatctttccaggggcatatttggcactgcttctttgat 127

                                                                       
Query: 312 tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 371
           ||||||||||||||| ||||| ||| |||||||||| | |||||    ||||||||||| 
Sbjct: 126 tacagcaacaataacgtcaccgatatgagcatatcggtaattac---tagctcctatgat 70

                                                                       
Query: 372 tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 431
           |||||||||||||| |||||||||||| || ||||| |||||||| ||| ||||||||||
Sbjct: 69  tcgaatacacatcagttttcgagctccgctgttgtccgctacattcaaatgggtctgagg 10

                    
Query: 432 ttgaatcat 440
           |||||||||
Sbjct: 9   ttgaatcat 1

to top

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  291 bits (147), Expect = 2e-75
 Identities = 323/381 (84%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||| || |||||||||||||||||||| |||||||| || | |||||||||| 
Sbjct: 82667 tttataatacctccggagctaatgaaactattttagtaaaatttaactgtctcaattccc 82726

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              |||||| || |||||||| |||||||| |||||||| |||| |||||| || | |||||
Sbjct: 82727 gggcaattgcaccaaaaacccgagttccctttgggtttccttcttgatcgatgacaaccg 82786

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             |||||||||||||||| || ||||| |||||||  || | ||||| ||||||||| ||||
Sbjct: 82787 cagcattgtcatcatatcgtattatcataccgttatcacgtttgagttctttacaagtac 82846

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             |||||||||||||||  |  ||||| |||||| |||| ||||| |  |||| ||| ||||
Sbjct: 82847 gtacaattacagctctgaccacttctgatcttgctaggggcatgtttggcactgcttctt 82906

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             |||| |||||||||||||| ||||| ||| ||||||||||  |||| |    ||||||||
Sbjct: 82907 tgatcacagcaacaataacgtcaccgatatgagcatatcgacgattgc---tagctccta 82963

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| ||||||||||||||||| |||||| || || || || |||||||| ||||||||||
Sbjct: 82964 tgattcgaatacacatcaattctcgagccccgctgttatccgctacattcaaaagggtct 83023

                                  
Query: 428   gaggttgaatcatattatttt 448
             ||||||||||||||| |||||
Sbjct: 83024 gaggttgaatcatatcatttt 83044



 Score =  113 bits (57), Expect = 8e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| |||||||||||||| || ||||||||||||||||| |||||||||||||| ||
Sbjct: 83256 tactccacccatttcataaaggattcgacctggtttaacaacagctacccaatattcagg 83315

                                                      
Query: 693   ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
             ||| || || ||||| |||||||||||||| | ||||||||
Sbjct: 83316 ggatcctttccccgaacccatacgtgtttctgcgggtctta 83356

to top

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  291 bits (147), Expect = 2e-75
 Identities = 317/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82452 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82511

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 82512 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 82571

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             ||||||||||||| || || ||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82572 cagcattgtcatcgtatcgtattatcatcccgttgtcacgtttgagttctttacaggtac 82631

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82632 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82691

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82692 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82748

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82749 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82808

                          
Query: 428   gaggttgaatcat 440
             |||||||||||||
Sbjct: 82809 gaggttgaatcat 82821



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| ||||||||||||||||| || || ||||||||||| |||||||||||||| ||
Sbjct: 83025 tactccacccatttcataaagtattcgccccggtttaacaacagctacccaatattcagg 83084

                                           
Query: 693   ggacccctttcccgagcccatacgtgtttc 722
             ||| || ||||| || |||||||| |||||
Sbjct: 83085 ggatccttttcctgaacccatacgggtttc 83114

to top

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  291 bits (147), Expect = 2e-75
 Identities = 317/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82449 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82508

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 82509 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 82568

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             ||||||||||||| || || ||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 82569 cagcattgtcatcgtatcgtattatcatcccgttgtcacgtttgagttctttacaggtac 82628

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 82629 gcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttctt 82688

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 82689 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 82745

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| ||||||||||||||||| |||||| || ||||| || |||||||||||| ||||||
Sbjct: 82746 tgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtct 82805

                          
Query: 428   gaggttgaatcat 440
             |||||||||||||
Sbjct: 82806 gaggttgaatcat 82818



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| ||||||||||||||||| || || ||||||||||| |||||||||||||| ||
Sbjct: 83022 tactccacccatttcataaagtattcgccccggtttaacaacagctacccaatattcagg 83081

                                           
Query: 693   ggacccctttcccgagcccatacgtgtttc 722
             ||| || ||||| || |||||||| |||||
Sbjct: 83082 ggatccttttcctgaacccatacgggtttc 83111

to top

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  289 bits (146), Expect = 6e-75
 Identities = 322/380 (84%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||| ||||| ||||| ||||||||||| |||||||| || | ||||||||||  
Sbjct: 85542 ttataatacctcaggggctaaggaaactattttagtaaaatttaactgtctcaattcccg 85601

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             | | ||||| ||||||| |||||||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 85602 gacgatcgcaccaaaaattcgagttccttttgggtttccttcttgatcaataataactgc 85661

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             ||||||||||||||| || ||||| |||||||  || | ||||| ||||||||| |||||
Sbjct: 85662 agcattgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacaggtacg 85721

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             ||||||||||||||  |||||||| ||||||||||||||||| |  || | | | |||||
Sbjct: 85722 tacaattacagctctgattacttctgatctttctagaggcatatttggtactacttcttt 85781

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||| |||||||||||||| ||||||||| |||| |||||  ||||||    || ||||||
Sbjct: 85782 gatcacagcaacaataacgtcaccaatatgagcgtatcggcgattac---tagttcctat 85838

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             || ||||||||||||||||| ||| || || || ||||| |||||||| ||| |||||||
Sbjct: 85839 gattcgaatacacatcaattctcgggccccgctgttgtccgctacattcaaatgggtctg 85898

                                 
Query: 429   aggttgaatcatattatttt 448
              ||||||||||||| |||||
Sbjct: 85899 gggttgaatcatatcatttt 85918



 Score =  139 bits (70), Expect = 1e-29
 Identities = 142/166 (85%)
 Strand = Plus / Plus

                                                                         
Query: 568   aattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagtt 627
             |||||| ||||||| ||||||||    |||||||| || ||||||  |||||||| | ||
Sbjct: 86054 aattgagttcgtataggcattttggacgccgctattgaaatagcttttctagctatattt 86113

                                                                         
Query: 628   tcagatactccccccatttcataaagtatacgacctggtttaacaacggctacccaatat 687
             || | |||||| ||||||||||||||||| | |||||||||||| || ||||||||||||
Sbjct: 86114 tctgctactccgcccatttcataaagtattctacctggtttaacgacagctacccaatat 86173

                                                           
Query: 688   tcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
             |||||||| || || ||||| ||||||||||||||||| |||||||
Sbjct: 86174 tcgggggatcctttccccgaacccatacgtgtttccgtaggtctta 86219

to top

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  287 bits (145), Expect = 3e-74
 Identities = 321/379 (84%), Gaps = 3/379 (0%)
 Strand = Plus / Plus

                                                                         
Query: 70    tataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg 129
             |||||||| ||||| ||||||||||||||||| |||||||| || | |||||||||   |
Sbjct: 80638 tataatacctcaggggctaatgaaactattttagtaaaattgaactgtctcaattctcgg 80697

                                                                         
Query: 130   gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgca 189
             |||||||| ||||||||||| ||||||||||| || |||| ||||||||| | ||| || 
Sbjct: 80698 gcaatcgcaccaaaaactcgcgttccttttggatttccttcttgatcaatcacaactgcg 80757

                                                                         
Query: 190   gcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgt 249
             |||||||||||||| || ||||| |||||||  || | ||| | ||||||||| ||||| 
Sbjct: 80758 gcattgtcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtacgg 80817

                                                                         
Query: 250   acaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttg 309
             |||||||||||||  |  ||||| ||||||||||||||||| |  || | ||||||||||
Sbjct: 80818 acaattacagctctgaccacttctgatctttctagaggcatgtttggaactgcgtctttg 80877

                                                                         
Query: 310   attacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatg 369
             || |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||||
Sbjct: 80878 atcacagcaacaataacgtcaccaatatgagcatatcggcgattgc---tagctcctatg 80934

                                                                         
Query: 370   actcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctga 429
             | ||||||||||||||||| |||||| || || || ||||||||||| ||| ||||||||
Sbjct: 80935 attcgaatacacatcaattctcgagccccgctgttatctgctacattcaaatgggtctga 80994

                                
Query: 430   ggttgaatcatattatttt 448
             ||||||||||||| |||||
Sbjct: 80995 ggttgaatcatatcatttt 81013



 Score =  113 bits (57), Expect = 8e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 81203 tactccacccatttcataaagtattcgacctggtttaacaacagctacccaatattcggg 81262

                                                      
Query: 693   ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
              || || || || || |||||||||||||| | ||||||||
Sbjct: 81263 agagcctttacctgaacccatacgtgtttctgcgggtctta 81303

to top

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  287 bits (145), Expect = 3e-74
 Identities = 318/375 (84%), Gaps = 3/375 (0%)
 Strand = Plus / Plus

                                                                         
Query: 66    tatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattc 125
             ||||||||||||||| ||||||||||| ||||| || || ||||| || | |||||||||
Sbjct: 86608 tatttataatacttcgggagctaatgagactatcttagtgaaatttaactgtctcaattc 86667

                                                                         
Query: 126   ctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataac 185
                 |||||||  ||||||||||| || |||||||| || |||| ||||||||| | |||
Sbjct: 86668 acgagcaatcgaaccaaaaactcgggtgccttttggatttccttcttgatcaatgacaac 86727

                                                                         
Query: 186   cgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgt 245
              || |||||||||||||| |||||||| |||||||  ||||  |||| ||||||||||||
Sbjct: 86728 tgctgcattgtcatcataccggattatcataccgttgtcgcgcttgagttctttacatgt 86787

                                                                         
Query: 246   acgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtc 305
             |||||||||||||||||  |||||||| |||||||| || ||||| |  |||| ||| ||
Sbjct: 86788 acgtacaattacagctctgattacttctgatctttccaggggcatatttggcactgcttc 86847

                                                                         
Query: 306   tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 365
             ||||||||||||||||||||| ||||| ||| |||||||||| | |||||    ||||||
Sbjct: 86848 tttgattacagcaacaataacgtcaccgatatgagcatatcggtaattac---tagctcc 86904

                                                                         
Query: 366   tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 425
             ||||| |||||||||||| | |||||| ||||| || ||||| |||||||| ||||||||
Sbjct: 86905 tatgattcgaatacacataagttttcgggctccgctgttgtccgctacattcaaaagggt 86964

                            
Query: 426   ctgaggttgaatcat 440
             |||||||||||||||
Sbjct: 86965 ctgaggttgaatcat 86979



 Score =  135 bits (68), Expect = 2e-28
 Identities = 113/128 (88%)
 Strand = Plus / Plus

                                                                         
Query: 607   atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
             ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| ||| | |||
Sbjct: 87172 atagcggctctggctacggtttctgatactccgcccatttcataaagtattcgatccggt 87231

                                                                         
Query: 667   ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 726
             ||||| |||| ||||||||||||||| || ||||| ||||| |||||||||||||||| |
Sbjct: 87232 ttaacgacggatacccaatattcgggagatcccttccccgaacccatacgtgtttccgcg 87291

                     
Query: 727   ggtcttag 734
             ||||||||
Sbjct: 87292 ggtcttag 87299

to top

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  287 bits (145), Expect = 3e-74
 Identities = 321/379 (84%), Gaps = 3/379 (0%)
 Strand = Plus / Plus

                                                                         
Query: 70    tataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg 129
             |||||||| ||||| ||||||||||||||||| |||||||| || | |||||||||   |
Sbjct: 80636 tataatacctcaggggctaatgaaactattttagtaaaattgaactgtctcaattctcgg 80695

                                                                         
Query: 130   gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgca 189
             |||||||| ||||||||||| ||||||||||| || |||| ||||||||| | ||| || 
Sbjct: 80696 gcaatcgcaccaaaaactcgcgttccttttggatttccttcttgatcaatcacaactgcg 80755

                                                                         
Query: 190   gcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgt 249
             |||||||||||||| || ||||| |||||||  || | ||| | ||||||||| ||||| 
Sbjct: 80756 gcattgtcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtacgg 80815

                                                                         
Query: 250   acaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttg 309
             |||||||||||||  |  ||||| ||||||||||||||||| |  || | ||||||||||
Sbjct: 80816 acaattacagctctgaccacttctgatctttctagaggcatgtttggaactgcgtctttg 80875

                                                                         
Query: 310   attacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatg 369
             || |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||||
Sbjct: 80876 atcacagcaacaataacgtcaccaatatgagcatatcggcgattgc---tagctcctatg 80932

                                                                         
Query: 370   actcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctga 429
             | ||||||||||||||||| |||||| || || || ||||||||||| ||| ||||||||
Sbjct: 80933 attcgaatacacatcaattctcgagccccgctgttatctgctacattcaaatgggtctga 80992

                                
Query: 430   ggttgaatcatattatttt 448
             ||||||||||||| |||||
Sbjct: 80993 ggttgaatcatatcatttt 81011



 Score =  113 bits (57), Expect = 8e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 81201 tactccacccatttcataaagtattcgacctggtttaacaacagctacccaatattcggg 81260

                                                      
Query: 693   ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
              || || || || || |||||||||||||| | ||||||||
Sbjct: 81261 agagcctttacctgaacccatacgtgtttctgcgggtctta 81301

to top

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  285 bits (144), Expect = 1e-73
 Identities = 323/382 (84%), Gaps = 3/382 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||||||||| |||||||||| |||||| || ||||| || | |||||||||  
Sbjct: 82960 tttataatacttcaggtgctaatgaaattatttttgtgaaatttaactgtctcaattctc 83019

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              ||||||||| ||||||| ||||||||||||||| || |||| ||||||||| | |||||
Sbjct: 83020 gggcaatcgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaaccg 83079

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             |||||||||||||||| || ||||| ||||| | ||| | ||||| ||||||||| ||||
Sbjct: 83080 cagcattgtcatcatatcgtattatcataccattttctcgtttgagttctttacaagtac 83139

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             |||||||||||||||  || ||||| |||||||||| |||  | |  || |  || |  |
Sbjct: 83140 gtacaattacagctctgatcacttctgatctttctaaaggtgtatttgggacggctttct 83199

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             ||||||||||||||||||| ||||||||| ||||||||||  ||||||    ||| ||||
Sbjct: 83200 tgattacagcaacaataacgtcaccaatatgagcatatcgtcgattac---tagccccta 83256

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| ||||||||||||||||| ||| ||||| || || ||||||||||| |||||||| |
Sbjct: 83257 tgattcgaatacacatcaattctcgggctccgctgttatctgctacattcaaaagggttt 83316

                                   
Query: 428   gaggttgaatcatattattttg 449
             ||||||||||||||||||||||
Sbjct: 83317 gaggttgaatcatattattttg 83338



 Score =  119 bits (60), Expect = 1e-23
 Identities = 120/140 (85%)
 Strand = Plus / Plus

                                                                         
Query: 595   gccgctatggagatagctgctctagctacagtttcagatactccccccatttcataaagt 654
             |||||||| || ||||||  ||| |||| | |||| | |||||| | |||||||||||||
Sbjct: 83516 gccgctattgaaatagcttttctggctatattttcggctactccactcatttcataaagt 83575

                                                                         
Query: 655   atacgacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccata 714
             || | ||||||||||||||| |||||||||||||||||||| || || || || ||||||
Sbjct: 83576 attctacctggtttaacaacagctacccaatattcgggggatcctttccctgaacccata 83635

                                 
Query: 715   cgtgtttccgtgggtcttag 734
             |||||||| |||||||||||
Sbjct: 83636 cgtgtttctgtgggtcttag 83655

to top

>gb|AF441853.1|AF441853 Cucumis sativus RBL1 mRNA, complete cds; chloroplast gene for
           chloroplast product
          Length = 703

 Score =  285 bits (144), Expect = 1e-73
 Identities = 323/382 (84%), Gaps = 3/382 (0%)
 Strand = Plus / Minus

                                                                       
Query: 68  tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
           |||||||||||||||| |||||||||| |||||| || ||||| || | |||||||||  
Sbjct: 436 tttataatacttcaggtgctaatgaaattatttttgtgaaatttaactgtctcaattctc 377

                                                                       
Query: 128 cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
            ||||||||| ||||||| ||||||||||||||| || |||| ||||||||| | |||||
Sbjct: 376 gggcaatcgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaaccg 317

                                                                       
Query: 188 cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
           |||||||||||||||| || ||||| ||||| | ||| | ||||| ||||||||| ||||
Sbjct: 316 cagcattgtcatcatatcgtattatcataccattttctcgtttgagttctttacaagtac 257

                                                                       
Query: 248 gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
           |||||||||||||||  || ||||| |||||||||| |||  | |  || |  || |  |
Sbjct: 256 gtacaattacagctctgatcacttctgatctttctaaaggtgtatttgggacggctttct 197

                                                                       
Query: 308 tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
           ||||||||||||||||||| ||||||||| ||||||||||  ||||||    ||| ||||
Sbjct: 196 tgattacagcaacaataacgtcaccaatatgagcatatcgtcgattac---tagccccta 140

                                                                       
Query: 368 tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
           ||| ||||||||||||||||| ||| ||||| || || ||||||||||| |||||||| |
Sbjct: 139 tgattcgaatacacatcaattctcgggctccgctgttatctgctacattcaaaagggttt 80

                                 
Query: 428 gaggttgaatcatattattttg 449
           ||||||||||||||||||||||
Sbjct: 79  gaggttgaatcatattattttg 58

to top

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  285 bits (144), Expect = 1e-73
 Identities = 323/382 (84%), Gaps = 3/382 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||||||||| |||||||||| |||||| || ||||| || | |||||||||  
Sbjct: 83188 tttataatacttcaggtgctaatgaaattatttttgtgaaatttaactgtctcaattctc 83247

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              ||||||||| ||||||| ||||||||||||||| || |||| ||||||||| | |||||
Sbjct: 83248 gggcaatcgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaaccg 83307

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             |||||||||||||||| || ||||| ||||| | ||| | ||||| ||||||||| ||||
Sbjct: 83308 cagcattgtcatcatatcgtattatcataccattttctcgtttgagttctttacaagtac 83367

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             |||||||||||||||  || ||||| |||||||||| |||  | |  || |  || |  |
Sbjct: 83368 gtacaattacagctctgatcacttctgatctttctaaaggtgtatttgggacggctttct 83427

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             ||||||||||||||||||| ||||||||| ||||||||||  ||||||    ||| ||||
Sbjct: 83428 tgattacagcaacaataacgtcaccaatatgagcatatcgtcgattac---tagccccta 83484

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| ||||||||||||||||| ||| ||||| || || ||||||||||| |||||||| |
Sbjct: 83485 tgattcgaatacacatcaattctcgggctccgctgttatctgctacattcaaaagggttt 83544

                                   
Query: 428   gaggttgaatcatattattttg 449
             ||||||||||||||||||||||
Sbjct: 83545 gaggttgaatcatattattttg 83566



 Score =  119 bits (60), Expect = 1e-23
 Identities = 120/140 (85%)
 Strand = Plus / Plus

                                                                         
Query: 595   gccgctatggagatagctgctctagctacagtttcagatactccccccatttcataaagt 654
             |||||||| || ||||||  ||| |||| | |||| | |||||| | |||||||||||||
Sbjct: 83744 gccgctattgaaatagcttttctggctatattttcggctactccactcatttcataaagt 83803

                                                                         
Query: 655   atacgacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccata 714
             || | ||||||||||||||| |||||||||||||||||||| || || || || ||||||
Sbjct: 83804 attctacctggtttaacaacagctacccaatattcgggggatcctttccctgaacccata 83863

                                 
Query: 715   cgtgtttccgtgggtcttag 734
             |||||||| |||||||||||
Sbjct: 83864 cgtgtttctgtgggtcttag 83883

to top

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  283 bits (143), Expect = 4e-73
 Identities = 316/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 82940 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 82999

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 83000 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 83059

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             |||||||||||||||| || |||||||| ||||  || | ||||| ||||||||| || |
Sbjct: 83060 cagcattgtcatcatatcgtattattatcccgttgtcacgtttgagttctttacaggtcc 83119

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || |  || ||||
Sbjct: 83120 gcacaattacagctctgactacttctgatctttctaggggcatatttggtatggcttctt 83179

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 83180 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 83236

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| ||||||||||||||||| |||||| || || || || |||||||||||| ||||||
Sbjct: 83237 tgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaatgggtct 83296

                          
Query: 428   gaggttgaatcat 440
             |||||||||||||
Sbjct: 83297 gaggttgaatcat 83309



 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||
Sbjct: 83517 tactccacccatttcataaagtattcgacccggtttaacaactgctacccaatattcagg 83576

                                                       
Query: 693   ggacccctttcccgagcccatacgtgtttccgtgggtcttag 734
             ||| || ||||| || |||||||||||||| | |||||||||
Sbjct: 83577 ggatccttttcctgaacccatacgtgtttctgcgggtcttag 83618

to top

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  276 bits (139), Expect = 1e-70
 Identities = 315/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 83177 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 83236

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 83237 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 83296

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             |||||||||||||||| || ||||| || ||||  || | ||||| ||||||||| || |
Sbjct: 83297 cagcattgtcatcatatcgtattatcatcccgttgtcacgtttgagttctttacaggtcc 83356

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || |  || ||||
Sbjct: 83357 gcacaattacagctctgactacttctgatctttctaggggcatatttggtacggcttctt 83416

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 83417 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 83473

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| ||||||||||||||||| |||||| || || || || |||||||||||| ||||||
Sbjct: 83474 tgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaatgggtct 83533

                          
Query: 428   gaggttgaatcat 440
             |||||||||||||
Sbjct: 83534 gaggttgaatcat 83546



 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||
Sbjct: 83749 tactccacccatttcataaagtattcgacccggtttaacaacagctacccaatattcagg 83808

                                                       
Query: 693   ggacccctttcccgagcccatacgtgtttccgtgggtcttag 734
             ||| || ||||| || |||||||||||||| | |||||||||
Sbjct: 83809 ggatccttttcctgaacccatacgtgtttctgcgggtcttag 83850

to top

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  276 bits (139), Expect = 1e-70
 Identities = 317/375 (84%), Gaps = 6/375 (1%)
 Strand = Plus / Plus

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||| ||||||||||||||||||||||| | ||| ||   || || |||||||  
Sbjct: 79239 ttataatacctcaggagctaatgaaactattttcgcaaattt---ttgtcgcaattcccg 79295

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             |||||| || ||||||| ||||||||||||||| || |||| ||||||||| ||||| ||
Sbjct: 79296 ggcaattgcaccaaaaattcgagttccttttggatttccttcttgatcaatgataactgc 79355

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             ||||||||||||||| || ||||| |||||||  |||| ||| | ||||||||| |||||
Sbjct: 79356 agcattgtcatcatatcgtattatcataccgttgtcgcgttttagttctttacaagtacg 79415

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             ||||| ||||||||  || ||||| ||||||||||  ||| | | ||| | ||| |||||
Sbjct: 79416 tacaactacagctctgatcacttctgatctttctaagggcgtgttggggattgcttcttt 79475

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||| |||||||||||||| ||||||||||||||||||||  | || |    |||||||||
Sbjct: 79476 gatcacagcaacaataacgtcaccaatacgagcatatcgacggttgc---tagctcctat 79532

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             || ||||||||||||||||| |||||| || || |||||||||||||| ||| |||||||
Sbjct: 79533 gattcgaatacacatcaattctcgagccccgctgttgtctgctacattcaaatgggtctg 79592

                            
Query: 429   aggttgaatcatatt 443
             |||||||||||||||
Sbjct: 79593 aggttgaatcatatt 79607



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Plus

                                                                         
Query: 643   atttcataaagtatacgacctggtttaacaacggctacccaatattcgggggaccccttt 702
             |||||||||||||| ||||||||||| ||||| ||||||||||||||||| || || || 
Sbjct: 79828 atttcataaagtattcgacctggtttgacaacagctacccaatattcgggagatcctttc 79887

                                            
Query: 703   cccgagcccatacgtgtttccgtgggtctta 733
             ||||| |||||||| ||||||| ||||||||
Sbjct: 79888 cccgaacccatacgggtttccgcgggtctta 79918

to top

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  276 bits (139), Expect = 1e-70
 Identities = 315/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 83420 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 83479

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 83480 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 83539

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             |||||||||||||||| || ||||| || ||||  || | ||||| ||||||||| ||||
Sbjct: 83540 cagcattgtcatcatatcgtattatcatcccgttgtcacgtttgagttctttacaggtac 83599

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             | |||||||||||||  | || ||| ||||||||||| ||||| |  || | ||| ||||
Sbjct: 83600 gcacaattacagctctgactatttctgatctttctaggggcatatttggtactgcttctt 83659

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 83660 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 83716

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| |||||||||||| |||| |||||| || || || || |||||||||||| ||||||
Sbjct: 83717 tgattcgaatacacattaattctcgagccccgctgttatccgctacatttaaatgggtct 83776

                          
Query: 428   gaggttgaatcat 440
             |||||||||||||
Sbjct: 83777 gaggttgaatcat 83789



 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||
Sbjct: 83997 tactccacccatttcataaagtattcgacccggtttaacaacagctacccaatattcagg 84056

                                                       
Query: 693   ggacccctttcccgagcccatacgtgtttccgtgggtcttag 734
             ||| || ||||| || |||||||||||||| | |||||||||
Sbjct: 84057 ggatccttttcctgaacccatacgtgtttctgcgggtcttag 84098

to top

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  276 bits (139), Expect = 1e-70
 Identities = 315/373 (84%), Gaps = 3/373 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 83175 tttataatacctcgggagctaatgaaactattttagtaaaatttaattctctcaattccc 83234

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 83235 gggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaactg 83294

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             |||||||||||||||| || ||||| || ||||  || | ||||| ||||||||| || |
Sbjct: 83295 cagcattgtcatcatatcgtattatcatcccgttgtcacgtttgagttctttacaggtcc 83354

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             | |||||||||||||  | |||||| ||||||||||| ||||| |  || |  || ||||
Sbjct: 83355 gcacaattacagctctgactacttctgatctttctaggggcatatttggtacggcttctt 83414

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             |||| |||||||||||||| ||||||||| ||||||||||  |||| |    ||||||||
Sbjct: 83415 tgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctccta 83471

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| ||||||||||||||||| |||||| || || || || |||||||||||| ||||||
Sbjct: 83472 tgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaatgggtct 83531

                          
Query: 428   gaggttgaatcat 440
             |||||||||||||
Sbjct: 83532 gaggttgaatcat 83544



 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||
Sbjct: 83747 tactccacccatttcataaagtattcgacccggtttaacaacagctacccaatattcagg 83806

                                                       
Query: 693   ggacccctttcccgagcccatacgtgtttccgtgggtcttag 734
             ||| || ||||| || |||||||||||||| | |||||||||
Sbjct: 83807 ggatccttttcctgaacccatacgtgtttctgcgggtcttag 83848

to top

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  274 bits (138), Expect = 4e-70
 Identities = 314/372 (84%), Gaps = 3/372 (0%)
 Strand = Plus / Plus

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||| || |||||||||||||||||||| || ||||| || | ||||||||||  
Sbjct: 85087 ttataatacctcgggagctaatgaaactattttagtgaaatttaactgtctcaattcccg 85146

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| ||||| ||||||| ||||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 85147 ggcgatcgcaccaaaaattcgagttccttttggatttccttcttgatcaatgacaacggc 85206

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             ||||||||||||||| || ||||| || ||||  |||| ||||| ||||||||  |||||
Sbjct: 85207 agcattgtcatcatatcgtattatcatcccgttgtcgcgtttgagttctttacgagtacg 85266

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             ||||||||||||||  || ||||| ||||||||||||||  | |  || | ||| || ||
Sbjct: 85267 tacaattacagctctgatcacttctgatctttctagaggtgtatttggtactgcttcctt 85326

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||| |||||||||||||| ||||||||| ||||||||||  ||||||    |||||||||
Sbjct: 85327 gatcacagcaacaataacgtcaccaatatgagcatatcggcgattac---tagctcctat 85383

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             |||||||||||||||||||| ||| || || || || ||||||||||| ||| |||||||
Sbjct: 85384 gactcgaatacacatcaattctcgggccccgctgttatctgctacattcaaatgggtctg 85443

                         
Query: 429   aggttgaatcat 440
             ||||||||||||
Sbjct: 85444 aggttgaatcat 85455



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                         
Query: 633   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
             |||||| | ||||||||||||||| |  || |||||||| || ||||||||||| |||||
Sbjct: 85669 tactccgctcatttcataaagtattctgcccggtttaacgacagctacccaatactcggg 85728

                                                      
Query: 693   ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
              || || || ||||| |||||||||||||| || |||||||
Sbjct: 85729 agatcctttccccgaacccatacgtgtttctgtaggtctta 85769

to top

>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0465E03
          Length = 151206

 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 550    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 147753 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 147694

                                                                          
Query: 610    gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
              |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 147693 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 147634

                                                                          
Query: 670    acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
              |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 147633 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 147574

                  
Query: 730    ctta 733
              ||||
Sbjct: 147573 ctta 147570



 Score =  153 bits (77), Expect = 1e-33
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                          
Query: 433    tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 492
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147871 tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 147812

                                   
Query: 493    gtctttccagaaagaaaaacc 513
              |||||||||||||||| ||||
Sbjct: 147811 gtctttccagaaagaagaacc 147791

to top

>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1585_D02
          Length = 103172

 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                         
Query: 550   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 609
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 55515 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 55456

                                                                         
Query: 610   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 55455 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 55396

                                                                         
Query: 670   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 729
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 55395 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 55336

                 
Query: 730   ctta 733
             ||||
Sbjct: 55335 ctta 55332



 Score =  153 bits (77), Expect = 1e-33
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                         
Query: 433   tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 492
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55633 tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 55574

                                  
Query: 493   gtctttccagaaagaaaaacc 513
             |||||||||||||||| ||||
Sbjct: 55573 gtctttccagaaagaagaacc 55553

to top

>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22
            for ribosomal proteins S3, S19, L14, L16 and L22
          Length = 4102

 Score =  254 bits (128), Expect = 4e-64
 Identities = 317/378 (83%), Gaps = 9/378 (2%)
 Strand = Plus / Minus

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||| ||||||||||||||||||||||| | ||| ||   || || |||||||  
Sbjct: 3697 ttataatacctcaggagctaatgaaactattttcgcaaattt---ttgtcgcaattcccg 3641

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc-- 186
            |||||| || ||||||| ||||||||||||||| || |||| ||||||||| |||||   
Sbjct: 3640 ggcaattgcaccaaaaattcgagttccttttggatttccttcttgatcaatgataacaac 3581

                                                                        
Query: 187  -gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgt 245
             ||||||||||||||||| || ||||| |||||||  |||| ||| | ||||||||| ||
Sbjct: 3580 tgcagcattgtcatcatatcgtattatcataccgttgtcgcgttttagttctttacaagt 3521

                                                                        
Query: 246  acgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtc 305
            |||||||| ||||||||  || ||||| ||||||||||  ||| | | ||| | ||| ||
Sbjct: 3520 acgtacaactacagctctgatcacttctgatctttctaagggcgtgttggggattgcttc 3461

                                                                        
Query: 306  tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 365
            |||||| |||||||||||||| ||||||||||||||||||||  | || |    ||||||
Sbjct: 3460 tttgatcacagcaacaataacgtcaccaatacgagcatatcgacggttgc---tagctcc 3404

                                                                        
Query: 366  tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 425
            ||||| ||||||||||||||||| |||||| || || |||||||||||||| ||| ||||
Sbjct: 3403 tatgattcgaatacacatcaattctcgagccccgctgttgtctgctacattcaaatgggt 3344

                              
Query: 426  ctgaggttgaatcatatt 443
            ||||||||||||||||||
Sbjct: 3343 ctgaggttgaatcatatt 3326



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                        
Query: 643  atttcataaagtatacgacctggtttaacaacggctacccaatattcgggggaccccttt 702
            |||||||||||||| ||||||||||| ||||| ||||||||||||||||| || || || 
Sbjct: 3105 atttcataaagtattcgacctggtttgacaacagctacccaatattcgggagatcctttc 3046

                                           
Query: 703  cccgagcccatacgtgtttccgtgggtctta 733
            ||||| |||||||| ||||||| ||||||||
Sbjct: 3045 cccgaacccatacgggtttccgcgggtctta 3015

to top

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
             strain:Columbia
          Length = 154478

 Score =  250 bits (126), Expect = 6e-63
 Identities = 317/380 (83%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||| ||||||||||||||||||||||| ||||| || |||| ||||||||||  
Sbjct: 80696 ttataatacctcaggagctaatgaaactattttagtaaagtttaattgtctcaattcccg 80755

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
              |  ||||| ||||||||||||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 80756 tgggatcgccccaaaaactcgagttccttttggatttccttcttgatcaatgacaactgc 80815

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||||||||| || |||||  | || |  |  | ||||| ||||||||| |||||
Sbjct: 80816 ggcattgtcatcatatcgtattatcgtcccattgttacgtttgagttctttacaagtacg 80875

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             |||||||||||||| ||| ||||| ||||||||||||||  | |  || | ||| |||||
Sbjct: 80876 tacaattacagctctaatcacttctgatctttctagaggagtatttggtattgcttcttt 80935

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             |||||||||||||||||| ||||||||| ||||||||||  ||||||    |||||||||
Sbjct: 80936 gattacagcaacaataacgtcaccaatatgagcatatcggcgattac---tagctcctat 80992

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
              | ||||||||||||||||| || ||| || || |||||||||||||| |||  ||| ||
Sbjct: 80993 tattcgaatacacatcaattctctagccccgctgttgtctgctacattcaaataggtttg 81052

                                 
Query: 429   aggttgaatcatattatttt 448
              ||||||||||||| |||||
Sbjct: 81053 tggttgaatcatatcatttt 81072



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 112/139 (80%)
 Strand = Plus / Plus

                                                                         
Query: 595   gccgctatggagatagctgctctagctacagtttcagatactccccccatttcataaagt 654
             |||||||| || ||||||  ||| |||| | |||| | ||| || |||||||||||||| 
Sbjct: 81232 gccgctattgaaatagcttttcttgctatattttcgggtacaccacccatttcataaagg 81291

                                                                         
Query: 655   atacgacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccata 714
             ||   |||||||||||| || ||||||||||| || ||||| || || || || ||||||
Sbjct: 81292 attttacctggtttaaccacagctacccaatactcaggggatcctttcccagaacccata 81351

                                
Query: 715   cgtgtttccgtgggtctta 733
             || |||||||  |||||||
Sbjct: 81352 cgcgtttccgcaggtctta 81370

to top

>dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0026A08
          Length = 171272

 Score =  242 bits (122), Expect = 1e-60
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                        
Query: 168  tttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtcttcgca 227
            |||||||||||| |||||| | |||||||  |||||||| ||||||||||| ||||||||
Sbjct: 4998 tttttgatcaatgataacctctgcattgttgtcatagcgtattattataccatcttcgca 4939

                                                                        
Query: 228  tttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttctagagg 287
            |||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 4938 tttgaactctttacatgtatgtacaattacacctcaaattacttcggatctttctagagg 4879

                                                              
Query: 288  catttggggcaatgcgtctttgattacagcaacaataacatcaccaatac 337
            ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4878 catttggggcactgcgtctttgattacagcaacaataacatcaccaatac 4829

to top

>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0091M20
          Length = 132976

 Score =  242 bits (122), Expect = 1e-60
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                         
Query: 168   tttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtcttcgca 227
             |||||||||||| |||||| | |||||||  |||||||| ||||||||||| ||||||||
Sbjct: 88345 tttttgatcaatgataacctctgcattgttgtcatagcgtattattataccatcttcgca 88286

                                                                         
Query: 228   tttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttctagagg 287
             |||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 88285 tttgaactctttacatgtatgtacaattacacctcaaattacttcggatctttctagagg 88226

                                                               
Query: 288   catttggggcaatgcgtctttgattacagcaacaataacatcaccaatac 337
             ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 88225 catttggggcactgcgtctttgattacagcaacaataacatcaccaatac 88176

to top

>gb|DQ069424.1| Ranunculus macranthus ribosomal protein L14 (rpl14) gene, partial
           cds; chloroplast
          Length = 366

 Score =  238 bits (120), Expect = 2e-59
 Identities = 310/370 (83%), Gaps = 5/370 (1%)
 Strand = Plus / Minus

                                                                       
Query: 72  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg-g 130
           |||||||||||| ||||||||||||||||| ||||||||||| | |||||| || ||| |
Sbjct: 366 taatacttcaggggctaatgaaactattttagtaaaattcaactgtctcaactc-tcgag 308

                                                                       
Query: 131 caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 190
           | || || ||||||||||||||||||||||| || |||| ||||||||| | ||| || |
Sbjct: 307 cgattgcaccaaaaactcgagttccttttggatttccttcttgatcaatgacaactgctg 248

                                                                       
Query: 191 cattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgta 250
           |||||||||||||  | ||||| ||||| |  || | ||||| ||||||||| || ||||
Sbjct: 247 cattgtcatcatattgtattatcataccattgtcacgtttgagttctttacacgtgcgta 188

                                                                       
Query: 251 caattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttga 310
           ||||||||||||  || ||||| ||||||| ||||||||| | ||| | ||| |||||||
Sbjct: 187 caattacagctctgatcacttctgatctttgtagaggcatattgggaactgcttctttga 128

                                                                       
Query: 311 ttacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatga 370
           |||| ||||||||||| || |||||| ||||||| ||  ||||||    |||||||||||
Sbjct: 127 ttaccgcaacaataacgtcgccaatatgagcataacgtcgattac---tagctcctatga 71

                                                                       
Query: 371 ctcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgag 430
            || ||||||||| ||||||| ||| || || ||||| ||||||||||||  ||||||||
Sbjct: 70  ttctaatacacattaattttctagccccgctgttgtccgctacatttaaataggtctgag 11

                     
Query: 431 gttgaatcat 440
           ||||||||||
Sbjct: 10  gttgaatcat 1

to top

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  234 bits (118), Expect = 3e-58
 Identities = 306/368 (83%), Gaps = 3/368 (0%)
 Strand = Plus / Plus

                                                                         
Query: 73    aatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggca 132
             ||||| || ||||||||||| ||||| || || |||||||| | |||||||||| | || 
Sbjct: 87322 aatacctcgggagctaatgatactatcttagtgaaattcaaatgtctcaattccccagcg 87381

                                                                         
Query: 133   atcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagca 192
             ||||  ||||| ||||||||||||||||| || || | | ||||||| | ||| || |||
Sbjct: 87382 atcgaaccaaagactcgagttccttttggatttccctctggatcaataacaactgctgca 87441

                                                                         
Query: 193   ttgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtaca 252
             ||||||||||| || |||||||||||||  || | ||||| |||||||||||||||||||
Sbjct: 87442 ttgtcatcatatcgtattattataccgttgtcacgtttgagttctttacatgtacgtaca 87501

                                                                         
Query: 253   attacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgatt 312
             ||||||||||  || ||||| |||||||| || ||||| | ||| | ||| |||||||||
Sbjct: 87502 attacagctctgatcacttctgatctttccaggggcatattgggtactgcttctttgatt 87561

                                                                         
Query: 313   acagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgact 372
             |||||||||||||| ||||||||| ||||||||||  | ||||    |||||||| || |
Sbjct: 87562 acagcaacaataacgtcaccaatatgagcatatcgggggttac---tagctcctacgatt 87618

                                                                         
Query: 373   cgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggt 432
             |||||||||||||||| |||||| || || ||||| |||||||| |||  ||| |||| |
Sbjct: 87619 cgaatacacatcaattctcgagccccgctgttgtccgctacattcaaataggtttgagct 87678

                     
Query: 433   tgaatcat 440
             ||||||||
Sbjct: 87679 tgaatcat 87686



 Score =  101 bits (51), Expect = 3e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                         
Query: 607   atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
             ||||||||||| || |||||||| |  ||||| |||||||||| |||||| ||||| |||
Sbjct: 87859 atagctgctctggcgacagtttctggcactccgcccatttcatgaagtattcgacccggt 87918

                                                                         
Query: 667   ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 726
             ||||  || |  ||||||||||| || || ||||||||||| |||||||||||||||| |
Sbjct: 87919 ttaattacagaaacccaatattcaggagatccctttcccgaacccatacgtgtttccgcg 87978

                    
Query: 727   ggtctta 733
             |||||||
Sbjct: 87979 ggtctta 87985

to top

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete
             sequence
          Length = 163935

 Score =  234 bits (118), Expect = 3e-58
 Identities = 315/380 (82%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||| ||||| ||||||||||||||||| || ||| | || ||||||||||| | 
Sbjct: 85802 ttataatacctcaggtgctaatgaaactattttagtgaaacttaactctctcaattcgtg 85861

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||||||||| ||||||||||| ||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 85862 ggcaatcgcaccaaaaactcgggttccttttggatttccttcttgatcaatgacaacagc 85921

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             ||||||||||||||| || ||||| |||||||| || ||||| | ||||||||| |||||
Sbjct: 85922 agcattgtcatcatatcgtattatgataccgtcgtcacatttaagttctttacaagtacg 85981

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             ||||||||||||||  |  ||||| ||||||||||| |   |    || ||||| || ||
Sbjct: 85982 tacaattacagctctgaccacttctgatctttctagggaggtgcttggtaatgcttcctt 86041

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||| |||||||||||||  ||||| ||| ||||||||||  ||||||    |||||| ||
Sbjct: 86042 gatcacagcaacaataatgtcaccgatatgagcatatcgacgattac---tagctccgat 86098

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             || |||||||||||| |||| |||||| ||||| || || || ||||| ||| |||| ||
Sbjct: 86099 gattcgaatacacattaattctcgagccccactgttatccgcgacattcaaacgggtttg 86158

                                 
Query: 429   aggttgaatcatattatttt 448
             |||||||||||||| |||||
Sbjct: 86159 aggttgaatcatatcatttt 86178



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                         
Query: 634   actccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggg 693
             ||||| ||||||||||||||||| | ||| ||||| || || ||||||||||||||||||
Sbjct: 86388 actccacccatttcataaagtattctacccggtttgacgacagctacccaatattcgggg 86447

                                          
Query: 694   gacccctttcccgagcccatacgtgtttc 722
                || || ||||| ||||||||||||||
Sbjct: 86448 tttcctttacccgaacccatacgtgtttc 86476

to top

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  218 bits (110), Expect = 2e-53
 Identities = 313/380 (82%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||| ||||| ||||||||||||||||| || ||||| || | |||||||||   
Sbjct: 85487 ttataatacctcaggtgctaatgaaactattttagtgaaatttaactgtctcaattctcg 85546

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||||||||| ||||||||||||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 85547 ggcaatcgcaccaaaaactcgagttccttttggatttccttcttgatcaatcacaactgc 85606

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             |||||| |||||||| || ||||| |||||||  || | ||| | ||||||||| |||||
Sbjct: 85607 agcattatcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtacg 85666

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 308
             ||||||||||||||  || || || ||||||||||||||  | |  || ||||| || ||
Sbjct: 85667 tacaattacagctctgatcacctctgatctttctagaggtgtgtttggtaatgcttcctt 85726

                                                                         
Query: 309   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 368
             ||| |||||||||||||  ||||| ||| ||||||||||  ||||||    |||||||||
Sbjct: 85727 gatcacagcaacaataatgtcaccgatatgagcatatcggcgattac---tagctcctat 85783

                                                                         
Query: 369   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 428
             || || ||||||||| |||| ||| || || || || || |||||||| ||| || | ||
Sbjct: 85784 gattctaatacacattaattctcgggccccgctgttatccgctacattcaaatggctttg 85843

                                 
Query: 429   aggttgaatcatattatttt 448
             |||||||||||||| |||||
Sbjct: 85844 aggttgaatcatatcatttt 85863



 Score =  131 bits (66), Expect = 4e-27
 Identities = 144/170 (84%)
 Strand = Plus / Plus

                                                                         
Query: 564   aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 623
             |||||||||| ||||||| ||||||||    |||||||| || |||||   ||| |||| 
Sbjct: 85998 aataaattgagttcgtataggcattttggacgccgctattgaaatagcctttctggctat 86057

                                                                         
Query: 624   agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 683
             | |||| | |||||| ||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 86058 attttctgctactccgcccatttcataaagtattcgacctggtttaacgacagctaccca 86117

                                                               
Query: 684   atattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
             ||||||||| || || || ||||| ||||||||||||||||| |||||||
Sbjct: 86118 atattcgggagatcctttacccgaacccatacgtgtttccgtaggtctta 86167

to top

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  216 bits (109), Expect = 8e-53
 Identities = 312/377 (82%), Gaps = 7/377 (1%)
 Strand = Plus / Plus

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||||||||||||||||||||||||||| ||||| || |||| ||||||||||  
Sbjct: 79787 ttataatacttcaggagctaatgaaactattttagtaaagtttaattgtctcaattcccg 79846

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
              |  ||||| |||||||| |||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 79847 tgggatcgccccaaaaacgcgagttccttttggatttccttcttgatcaatgacaactgc 79906

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              |||||||| ||||| || |||||  | || |  |  | ||||| ||||||||| |||||
Sbjct: 79907 ggcattgtcgtcatatcgtattatcgtcccattcttacgtttgagttctttacaagtacg 79966

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagag--gcatttggggcaatgcgtct 306
             ||||||||||||||  |  ||||| |||||||||||||  | |||||||  | ||| || 
Sbjct: 79967 tacaattacagctctgaccacttctgatctttctagagtagtatttggg--attgcttcc 80024

                                                                         
Query: 307   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 366
             |||||||||||||||||||| ||||||||| ||||||| ||  ||||||    |||||||
Sbjct: 80025 ttgattacagcaacaataacgtcaccaatatgagcatagcggcgattac---tagctcct 80081

                                                                         
Query: 367   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 426
             || | |||||||||||||||||||| ||| || || |||||||||||||| |||  ||| 
Sbjct: 80082 attattcgaatacacatcaattttctagccccgctgttgtctgctacattcaaataggtt 80141

                              
Query: 427   tgaggttgaatcatatt 443
             || ||||||||||||||
Sbjct: 80142 tgtggttgaatcatatt 80158



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 78/94 (82%)
 Strand = Plus / Plus

                                                                         
Query: 640   cccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggacccc 699
             |||||||||||||| ||   |||||||||||| || |||||||| || || ||||| || 
Sbjct: 80360 cccatttcataaaggattttacctggtttaaccacagctacccagtactctggggatcct 80419

                                               
Query: 700   tttcccgagcccatacgtgtttccgtgggtctta 733
             || || || |||||||| ||||||| ||||||||
Sbjct: 80420 ttcccagaacccatacgcgtttccgcgggtctta 80453

to top

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  212 bits (107), Expect = 1e-51
 Identities = 313/381 (82%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||  ||||| ||||||||||||||||| || ||||| || | |||||||||| 
Sbjct: 78574 tttataatatctcaggcgctaatgaaactattttagtgaaattgaactgtctcaattccc 78633

                                                                         
Query: 128   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 187
              ||| || |||| ||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 78634 gggcgattgcgcaaaaaattcgagttccttttggatttccttcttgatcaatgacaactg 78693

                                                                         
Query: 188   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 247
             ||||||| ||||||||  | ||||||||||| |     | ||||| ||||||||| ||||
Sbjct: 78694 cagcattatcatcatactgtattattataccattgctacgtttgagttctttacaagtac 78753

                                                                         
Query: 248   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 307
             |||||||||||||||  || ||||| ||||||||||  ||  | |  || | ||| ||||
Sbjct: 78754 gtacaattacagctctgatcacttctgatctttctaagggtgtattcggtactgcttctt 78813

                                                                         
Query: 308   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 367
             ||||||||||||||| ||  |||||||||  ||| |||||  |||||| |||   |||||
Sbjct: 78814 tgattacagcaacaacaatgtcaccaatataagcgtatcgtcgattactagc---tccta 78870

                                                                         
Query: 368   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 427
             ||| |||||||||||||||||| || ||||| ||||| || |||||||||||| |||| |
Sbjct: 78871 tgattcgaatacacatcaatttgcgggctccgctattatcggctacatttaaatgggttt 78930

                                  
Query: 428   gaggttgaatcatattatttt 448
             ||||||||||||||| |||||
Sbjct: 78931 gaggttgaatcatatcatttt 78951



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                         
Query: 634   actccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggg 693
             ||||| ||||||||||||| |||    || |||||||| |||||||||||||||||||| 
Sbjct: 79160 actccgcccatttcataaactatttttccgggtttaactacggctacccaatattcggga 79219

                                                     
Query: 694   gacccctttcccgagcccatacgtgtttccgtgggtctta 733
             || ||||||||||| |||||||| ||||| || |||||||
Sbjct: 79220 gatccctttcccgaacccatacgcgtttcggtaggtctta 79259

to top

>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
          Length = 452528

 Score =  210 bits (106), Expect = 5e-51
 Identities = 277/334 (82%), Gaps = 15/334 (4%)
 Strand = Plus / Minus

                                                                         
Query: 59    ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattcaattctc 118
             |||||||||||| |||||| ||||||||| |||| ||| |||| || |||||||    ||
Sbjct: 99133 ctactagtatttttaatacctcaggagctcatgagactcttttagtgaaattcataagtc 99074

                                                                         
Query: 119   tcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaa 178
             ||||||||   || ||||| ||||||||||||||||||||||| || |||| ||||||||
Sbjct: 99073 tcaattcccgagcgatcgcaccaaaaactcgagttccttttggatttccttcttgatcaa 99014

                                                                         
Query: 179   ttataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctt 238
             | | |||||        |||||||| || ||||| |||||||  || | ||||| |||||
Sbjct: 99013 tgacaaccg--------tcatcatatcgtattatcataccgttgtcacgtttgagttctt 98962

                                                                         
Query: 239   tacatgtacgtacaattacagctcgaattacttcgg----atctttctagaggcatttgg 294
             |||||||||||||||||||||||||  ||||||| |    |||||||||||||||||| |
Sbjct: 98961 tacatgtacgtacaattacagctcgtcttacttctgtctgatctttctagaggcattttg 98902

                                                                         
Query: 295   ggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgatta 354
             |||| ||| ||||||||||||||||||||||| ||||||||| |||||||||  ||||||
Sbjct: 98901 ggcactgcttctttgattacagcaacaataacgtcaccaatatgagcatatcagtgatta 98842

                                               
Query: 355   ccagcagctcctatgactcgaatacacatcaatt 388
             |   ||||||||| || ||||||||| |||||||
Sbjct: 98841 c---cagctcctaagattcgaatacatatcaatt 98811

to top

>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0229B10
          Length = 114509

 Score =  186 bits (94), Expect = 7e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                         
Query: 72    taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 131
             |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 54859 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 54918

                                                                         
Query: 132   aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 191
              || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 54919 gattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 54977

                                                       
Query: 192   attgtcatcatagcggattattataccgtcttcgcatttgaa 233
             |||||  |||||||| ||||||||||||||||||||||||||
Sbjct: 54978 attgttgtcatagcgtattattataccgtcttcgcatttgaa 55019

to top

>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0569E11
          Length = 157319

 Score =  186 bits (94), Expect = 7e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                          
Query: 72     taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 131
              |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 137662 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 137721

                                                                          
Query: 132    aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 191
               || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 137722 gattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 137780

                                                        
Query: 192    attgtcatcatagcggattattataccgtcttcgcatttgaa 233
              |||||  |||||||| ||||||||||||||||||||||||||
Sbjct: 137781 attgttgtcatagcgtattattataccgtcttcgcatttgaa 137822

to top

>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0091C18
          Length = 154416

 Score =  186 bits (94), Expect = 7e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                          
Query: 72     taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 131
              |||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 130073 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattcctcggc 130132

                                                                          
Query: 132    aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 191
               || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 130133 cattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 130191

                                                        
Query: 192    attgtcatcatagcggattattataccgtcttcgcatttgaa 233
              | |||  |||||||| ||||||||||||||||||||||||||
Sbjct: 130192 actgttgtcatagcgtattattataccgtcttcgcatttgaa 130233

to top

>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1770_H03
          Length = 189893

 Score =  186 bits (94), Expect = 7e-44
 Identities = 146/162 (90%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                         
Query: 72    taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 131
             |||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 66843 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattcctcggc 66902

                                                                         
Query: 132   aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 191
              || ||||||||||| | |||||| ||||| || ||||||| |||||| |||||||||||
Sbjct: 66903 cattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcagc 66961

                                                       
Query: 192   attgtcatcatagcggattattataccgtcttcgcatttgaa 233
             | |||  |||||||| ||||||||||||||||||||||||||
Sbjct: 66962 actgttgtcatagcgtattattataccgtcttcgcatttgaa 67003

to top

>dbj|AB077365.1| Iris dichotoma plastid DNA, intron region
          Length = 566

 Score =  180 bits (91), Expect = 4e-42
 Identities = 142/159 (89%)
 Strand = Plus / Minus

                                                                       
Query: 567 aaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagt 626
           ||||||| ||||||| |||||||| |  || ||||| || ||||||||||| ||||||||
Sbjct: 379 aaattgagttcgtataggcattttgcacgcagctattgaaatagctgctctggctacagt 320

                                                                       
Query: 627 ttcagatactccccccatttcataaagtatacgacctggtttaacaacggctacccaata 686
           ||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 319 ttctgatactccgcccatttcataaagtattcgacctggtttaacaacggatacccaata 260

                                                  
Query: 687 ttcgggggacccctttcccgagcccatacgtgtttccgt 725
           ||||||||| ||||| || || |||||||||||||||||
Sbjct: 259 ttcgggggatcccttccctgaacccatacgtgtttccgt 221



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 413 catttaaaagggtctgaggttgaatcat 440
           ||||||||||||||||||||||||||||
Sbjct: 558 catttaaaagggtctgaggttgaatcat 531

to top

>gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0010M24, complete sequence
          Length = 164853

 Score =  176 bits (89), Expect = 7e-41
 Identities = 140/157 (89%)
 Strand = Plus / Minus

                                                                         
Query: 577   cgtatgggcattttactggccgctatggagatagctgctctagctacagtttcagatact 636
             ||||| ||||||||  |||| |||||||| ||||||||||||||||| | ||| | ||||
Sbjct: 75834 cgtataggcattttggtggcagctatggaaatagctgctctagctactgcttcgggtact 75775

                                                                         
Query: 637   ccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggac 696
             || ||||||||||||||||| || |||  |||||||||||||||||||||||||||||| 
Sbjct: 75774 ccacccatttcataaagtattcggccttttttaacaacggctacccaatattcgggggat 75715

                                                  
Query: 697   ccctttcccgagcccatacgtgtttccgtgggtctta 733
             ||||||||||| ||||||||||||||||| |||||||
Sbjct: 75714 ccctttcccgaacccatacgtgtttccgtcggtctta 75678

to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  176 bits (89), Expect = 7e-41
 Identities = 140/157 (89%)
 Strand = Plus / Plus

                                                                           
Query: 577     cgtatgggcattttactggccgctatggagatagctgctctagctacagtttcagatact 636
               ||||| ||||||||  |||| |||||||| ||||||||||||||||| | ||| | ||||
Sbjct: 9208186 cgtataggcattttggtggcagctatggaaatagctgctctagctactgcttcgggtact 9208245

                                                                           
Query: 637     ccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggac 696
               || ||||||||||||||||| || |||  |||||||||||||||||||||||||||||| 
Sbjct: 9208246 ccacccatttcataaagtattcggccttttttaacaacggctacccaatattcgggggat 9208305

                                                    
Query: 697     ccctttcccgagcccatacgtgtttccgtgggtctta 733
               ||||||||||| ||||||||||||||||| |||||||
Sbjct: 9208306 ccctttcccgaacccatacgtgtttccgtcggtctta 9208342



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 320      caataacatcaccaatacgagcatatcgctgattaccagc 359
                ||||||| ||||||||| |||||||||  |||||||||||
Sbjct: 11796144 caataacgtcaccaatatgagcatatcagtgattaccagc 11796105

to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  176 bits (89), Expect = 7e-41
 Identities = 140/157 (89%)
 Strand = Plus / Plus

                                                                           
Query: 577     cgtatgggcattttactggccgctatggagatagctgctctagctacagtttcagatact 636
               ||||| ||||||||  |||| |||||||| ||||||||||||||||| | ||| | ||||
Sbjct: 9279883 cgtataggcattttggtggcagctatggaaatagctgctctagctactgcttcgggtact 9279942

                                                                           
Query: 637     ccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggac 696
               || ||||||||||||||||| || |||  |||||||||||||||||||||||||||||| 
Sbjct: 9279943 ccacccatttcataaagtattcggccttttttaacaacggctacccaatattcgggggat 9280002

                                                    
Query: 697     ccctttcccgagcccatacgtgtttccgtgggtctta 733
               ||||||||||| ||||||||||||||||| |||||||
Sbjct: 9280003 ccctttcccgaacccatacgtgtttccgtcggtctta 9280039



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 320      caataacatcaccaatacgagcatatcgctgattaccagc 359
                ||||||| ||||||||| |||||||||  |||||||||||
Sbjct: 11874555 caataacgtcaccaatatgagcatatcagtgattaccagc 11874516

to top

>gb|DQ069420.1| Yucca schidigera ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 390

 Score =  172 bits (87), Expect = 1e-39
 Identities = 147/167 (88%)
 Strand = Plus / Minus

                                                                       
Query: 567 aaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagt 626
           ||||||| ||||||| |||||||| |  || ||||| || ||||||| ||| ||||||||
Sbjct: 387 aaattgagttcgtataggcattttgcacgcagctattgaaatagctgttctggctacagt 328

                                                                       
Query: 627 ttcagatactccccccatttcataaagtatacgacctggtttaacaacggctacccaata 686
           ||| |||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||
Sbjct: 327 ttcggatactccacccatttcataaagtattcgacctggtttaacaacagatacccaata 268

                                                          
Query: 687 ttcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
           ||||||||| ||||| ||||| |||||||||||||| || |||||||
Sbjct: 267 ttcgggggatcccttccccgaacccatacgtgtttctgtaggtctta 221

to top

>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion,
              complete genome
          Length = 491515

 Score =  170 bits (86), Expect = 4e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 139    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 198
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 331098 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 331047

                                                                          
Query: 199    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 258
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 331046 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330987

                                                                          
Query: 259    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 314
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330986 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 330927

                                                                          
Query: 315    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 374
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 330926 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 330870

                            
Query: 375    aatacacatcaatt 388
              |||||| |||||||
Sbjct: 330869 aatacatatcaatt 330856



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 59     ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 112
              ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 331166 ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 331113

to top

>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion,
              complete genome
          Length = 490673

 Score =  170 bits (86), Expect = 4e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 139    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 198
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 330288 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 330237

                                                                          
Query: 199    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 258
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 330236 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330177

                                                                          
Query: 259    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 314
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330176 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 330117

                                                                          
Query: 315    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 374
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 330116 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 330060

                            
Query: 375    aatacacatcaatt 388
              |||||| |||||||
Sbjct: 330059 aatacatatcaatt 330046



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 59     ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 112
              ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 330356 ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 330303

to top

>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion,
              complete genome
          Length = 490669

 Score =  170 bits (86), Expect = 4e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 139    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 198
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 330285 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 330234

                                                                          
Query: 199    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 258
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 330233 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330174

                                                                          
Query: 259    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 314
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330173 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 330114

                                                                          
Query: 315    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 374
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 330113 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 330057

                            
Query: 375    aatacacatcaatt 388
              |||||| |||||||
Sbjct: 330056 aatacatatcaatt 330043



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 59     ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 112
              ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 330353 ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 330300

to top

>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome
          Length = 490520

 Score =  170 bits (86), Expect = 4e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 139    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 198
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 330142 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 330091

                                                                          
Query: 199    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 258
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 330090 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330031

                                                                          
Query: 259    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 314
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330030 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 329971

                                                                          
Query: 315    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 374
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 329970 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 329914

                            
Query: 375    aatacacatcaatt 388
              |||||| |||||||
Sbjct: 329913 aatacatatcaatt 329900



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 59     ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 112
              ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 330210 ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 330157

to top

>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence,
            complete sequence
          Length = 27470

 Score =  163 bits (82), Expect = 1e-36
 Identities = 143/162 (88%), Gaps = 1/162 (0%)
 Strand = Plus / Minus

                                                                        
Query: 72   taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggc 131
            |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 5365 taatacttcatgagcttatgaaactattttagtaaaattcaattctctcaattccttggc 5306

                                                                        
Query: 132  aatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagc 191
             || || |||||||| | |||||| ||||| || ||||||| |||||| ||||||| |||
Sbjct: 5305 gattgcaccaaaaacgcaagttccatttggatttccttttt-atcaatgataaccgtagc 5247

                                                      
Query: 192  attgtcatcatagcggattattataccgtcttcgcatttgaa 233
            | |||| |||||||| |||||||||| |||||||||||||||
Sbjct: 5246 actgtcgtcatagcgtattattatactgtcttcgcatttgaa 5205

to top

>gb|DQ069419.1| Typha latifolia ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 408

 Score =  159 bits (80), Expect = 2e-35
 Identities = 137/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 567 aaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagt 626
           ||||||| ||||||| |||||||| |  || ||||| | |||||||||||||||||||||
Sbjct: 396 aaattgagttcgtataggcattttgcgcgcagctattgcgatagctgctctagctacagt 337

                                                                       
Query: 627 ttcagatactccccccatttcataaagtatacgacctggtttaacaacggctacccaata 686
           ||| |||||||| |||||||||||||| || ||||| ||||||||||||| |||||||||
Sbjct: 336 ttctgatactccacccatttcataaaggattcgacccggtttaacaacggatacccaata 277

                                               
Query: 687 ttcgggggacccctttcccgagcccatacgtgtttc 722
           ||||||||| || || || || ||||||||||||||
Sbjct: 276 ttcgggggatcctttaccggaacccatacgtgtttc 241

to top

>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/165 (87%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                         
Query: 228   tttgaattctttacatgtacgtacaattacagctcgaattacttcgg----atctttcta 283
             ||||| ||||||||||||||||||||||||||||||  ||||||| |    |||||||||
Sbjct: 37711 tttgagttctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttcta 37652

                                                                         
Query: 284   gaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcat 343
             ||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 37651 gaggcattttgggcactgcttctttgattacagcaacaataacgtcaccaatatgagcat 37592

                                                          
Query: 344   atcgctgattaccagcagctcctatgactcgaatacacatcaatt 388
             |||  |||||||   ||||||||| || ||||||||| |||||||
Sbjct: 37591 atcagtgattac---cagctcctaagattcgaatacatatcaatt 37550

to top

>dbj|D13105.1|RICMT09 Oryza sativa (japonica cultivar-group) mitochondrial rp114
           pseudogene, clone:pMTVSCT13
          Length = 645

 Score =  155 bits (78), Expect = 2e-34
 Identities = 210/254 (82%), Gaps = 15/254 (5%)
 Strand = Plus / Plus

                                                                       
Query: 139 ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 198
           ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 161 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 212

                                                                       
Query: 199 tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 258
           ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 213 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 272

                                                                       
Query: 259 gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 314
           |||||  ||||||| |    |||||||||||| ||||| ||||| ||| |||||||||||
Sbjct: 273 gctcgtcttacttctgtctgatctttctagagccattttgggcactgcttctttgattac 332

                                                                       
Query: 315 agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 374
           |||||||||||| || |||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 333 agcaacaataacgtccccaatatgagcatatcagtgattac---cagctcctaagattcg 389

                         
Query: 375 aatacacatcaatt 388
           |||||| |||||||
Sbjct: 390 aatacatatcaatt 403



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 59  ctactagtatttataatacttcaggagctaatgaaactattttggtaaaattca 112
           ||||||||||||||||||| ||||||||| |||| ||| |||| || |||||||
Sbjct: 93  ctactagtatttataatacctcaggagctcatgagactctttttgtgaaattca 146

to top

>gb|DQ069415.1| Acorus americanus ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 390

 Score =  149 bits (75), Expect = 2e-32
 Identities = 114/127 (89%)
 Strand = Plus / Minus

                                                                       
Query: 607 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
           ||||| ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||| |||
Sbjct: 347 atagcggctctggctacagtttctgatactccacccatctcataaagtattcgacccggt 288

                                                                       
Query: 667 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 726
           |||||||||| |||||| ||||||||||| ||||| ||||| |||||||||||||||| |
Sbjct: 287 ttaacaacggatacccagtattcgggggatcccttccccgaacccatacgtgtttccgcg 228

                  
Query: 727 ggtctta 733
           |||||||
Sbjct: 227 ggtctta 221

to top

>dbj|AB077366.1| Iris bungei plastid DNA, intron region
          Length = 576

 Score =  149 bits (75), Expect = 2e-32
 Identities = 114/127 (89%)
 Strand = Plus / Minus

                                                                       
Query: 607 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
           ||||||||||| ||||||||||| |||||||| ||||||||||||||||| || || |||
Sbjct: 330 atagctgctctggctacagtttctgatactccgcccatttcataaagtattcggcccggt 271

                                                                       
Query: 667 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 726
           |||||||||| |||||||||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 270 ttaacaacggatacccaatattcaggggatcccttccctgaacccatgcgtgtttccgtg 211

                  
Query: 727 ggtctta 733
           |||||||
Sbjct: 210 ggtctta 204



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                       
Query: 413 catttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgc 472
           |||||||||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||
Sbjct: 568 catttaaaagggtctgaggttgaatcatatcatttttatttgaatctgttatttcaatgc 509

              
Query: 473 aaa 475
           |||
Sbjct: 508 aaa 506

to top

>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0439E07
          Length = 176486

 Score =  145 bits (73), Expect = 2e-31
 Identities = 160/189 (84%)
 Strand = Plus / Minus

                                                                         
Query: 157   tttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattata 216
             ||||| || |||||||||||||| |||||  | |||||||  | |||| | |||||||||
Sbjct: 33438 tttggatttcctttttgatcaatgataacgactgcattgttgttatagagtattattata 33379

                                                                         
Query: 217   ccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggat 276
             |||| || ||||||||| ||  |||||||| | |||||||||| ||| |||||||  |||
Sbjct: 33378 ccgtttttgcatttgaaatccatacatgtatgcacaattacagatcgtattacttttgat 33319

                                                                         
Query: 277   ctttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaata 336
             |||||||||||||| | || || ||| ||||| |||||||||||||||||||||||||||
Sbjct: 33318 ctttctagaggcatcttggacactgcatcttttattacagcaacaataacatcaccaata 33259

                      
Query: 337   cgagcatat 345
             |||| ||||
Sbjct: 33258 cgagtatat 33250

to top

>gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial sequence
          Length = 6550

 Score =  141 bits (71), Expect = 4e-30
 Identities = 179/215 (83%)
 Strand = Plus / Minus

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||| ||||| ||||||||||||||||| || ||||| || | ||||||||||  
Sbjct: 5904 ttataatacctcaggtgctaatgaaactattttagtgaaatttaactgtctcaattcccg 5845

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
            ||| || |||| ||| | ||||||||||||||| || |||| ||||||||||||||| ||
Sbjct: 5844 ggcgattgcgcaaaagattcgagttccttttggatttccttcttgatcaattataactgc 5785

                                                                        
Query: 189  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
            |||||| ||||||||  | |||||||||||||     | ||| | || |||||| |||||
Sbjct: 5784 agcattatcatcatactgaattattataccgttgctacgttttagttgtttacaagtacg 5725

                                               
Query: 249  tacaattacagctcgaattacttcggatctttcta 283
            ||||||||||||||  || ||||| ||||||||||
Sbjct: 5724 tacaattacagctctgatcacttcagatctttcta 5690



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                        
Query: 633  tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
            |||||| |||||||||||||||||    || ||||||||||| |||||||||||||||||
Sbjct: 5321 tactccacccatttcataaagtattttcccaggtttaacaacagctacccaatattcggg 5262

                                                     
Query: 693  ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
              | || ||||| || |||||||||||||| || |||||||
Sbjct: 5261 aaatccttttcctgaacccatacgtgtttcagtaggtctta 5221



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 116/143 (81%), Gaps = 3/143 (2%)
 Strand = Plus / Minus

                                                                        
Query: 306  tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 365
            ||||||||||||||||| ||  || ||||||  |||||||||  |||||| |||   |||
Sbjct: 5667 tttgattacagcaacaacaatgtcgccaatataagcatatcgtcgattactagc---tcc 5611

                                                                        
Query: 366  tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 425
            || || |||||||||||||| ||  || ||||| || || || |||||||| ||| | ||
Sbjct: 5610 taggattcgaatacacatcagttcacgtgctccgctgttatccgctacattcaaatgagt 5551

                                   
Query: 426  ctgaggttgaatcatattatttt 448
             |||||||||||||||| |||||
Sbjct: 5550 ttgaggttgaatcatatcatttt 5528

to top

>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1046_F10
          Length = 118472

 Score =  141 bits (71), Expect = 4e-30
 Identities = 126/143 (88%), Gaps = 1/143 (0%)
 Strand = Plus / Minus

                                                                         
Query: 91    gaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcga 150
             ||||||||||| |||||||||||||||||||||| |||| | |||||||||||||| | |
Sbjct: 87867 gaaactattttagtaaaattcaattctctcaattactcgacgatcgcgccaaaaacgcaa 87808

                                                                         
Query: 151   gttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggatt 210
             ||||| ||||| || ||||||| |  ||| ||| |||  ||||||||||||||||| |||
Sbjct: 87807 gttccatttggatttccttttt-actaatgatatccgttgcattgtcatcatagcgtatt 87749

                                    
Query: 211   attataccgtcttcgcatttgaa 233
             |||||||||||||||||||||||
Sbjct: 87748 attataccgtcttcgcatttgaa 87726

to top

>dbj|AB096925.1| Papaver somniferum chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 493

 Score =  141 bits (71), Expect = 4e-30
 Identities = 113/127 (88%)
 Strand = Plus / Minus

                                                                       
Query: 607 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||| |||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgacccggt 245

                                                                       
Query: 667 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 726
           ||||| || | ||||||||||||||| || |||||||||||||||||||| |||||||| 
Sbjct: 244 ttaacgacagatacccaatattcgggagatccctttcccgagcccatacgcgtttccgta 185

                  
Query: 727 ggtctta 733
           |||||||
Sbjct: 184 ggtctta 178

to top

>dbj|AB096924.1| Papaver setigerum chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 493

 Score =  141 bits (71), Expect = 4e-30
 Identities = 113/127 (88%)
 Strand = Plus / Minus

                                                                       
Query: 607 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||| |||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgacccggt 245

                                                                       
Query: 667 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 726
           ||||| || | ||||||||||||||| || |||||||||||||||||||| |||||||| 
Sbjct: 244 ttaacgacagatacccaatattcgggagatccctttcccgagcccatacgcgtttccgta 185

                  
Query: 727 ggtctta 733
           |||||||
Sbjct: 184 ggtctta 178

to top

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  139 bits (70), Expect = 1e-29
 Identities = 306/382 (80%), Gaps = 7/382 (1%)
 Strand = Plus / Minus

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||| || || ||||||||||||||||| || ||||| || | |||||||||   
Sbjct: 45042 ttataatacctcgggtgctaatgaaactattttagtgaaatttaactgtctcaattctcg 44983

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| || |||  ||||| ||||||||||||||| || |||| || |||||| | ||||||
Sbjct: 44982 ggctattgcggaaaaaattcgagttccttttggatttccttctttatcaatgagaaccgc 44923

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
              ||||| ||||||||    ||||||||||| |     | ||| | ||||||||| |||||
Sbjct: 44922 cgcattatcatcatactttattattataccattactacgttttagttctttacaagtacg 44863

                                                                         
Query: 249   tacaattacagctcgaattacttcggatctttctagag--gcatttggggcaatgcgtct 306
             |||||||||||| |  || ||||| |||||||||| ||  | ||||||  |  ||| | |
Sbjct: 44862 tacaattacagccctgatcacttcagatctttctaaagatgaatttggtac--tgctttt 44805

                                                                         
Query: 307   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 366
             |||||||||||||||| ||  |||||||||  |||||| ||  |||||| |||   ||||
Sbjct: 44804 ttgattacagcaacaacaatgtcaccaatataagcataccgtcgattactagc---tcct 44748

                                                                         
Query: 367   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 426
             |||| |||||||||||||||||  || ||||| ||||| || ||||||||||||  ||| 
Sbjct: 44747 atgattcgaatacacatcaattcgcgggctccgctattatcggctacatttaaataggtt 44688

                                   
Query: 427   tgaggttgaatcatattatttt 448
             |||||||||||||||| |||||
Sbjct: 44687 tgaggttgaatcatatcatttt 44666



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                         
Query: 563   gaataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagcta 622
             |||| |||||| ||||||| ||||||||    |||||||| || |||||   ||||||||
Sbjct: 44537 gaatgaattgagttcgtataggcattttggatgccgctattgaaatagcctttctagcta 44478

                                                                         
Query: 623   cagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccc 682
              | |||| |  || || |||||||||||||||||    || |||||||| || |||||||
Sbjct: 44477 tattttctgggacccctcccatttcataaagtattttgccgggtttaacgacagctaccc 44418

                                                                
Query: 683   aatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
             |||||||||| || || |||||||| |||||||| ||||| || |||||||
Sbjct: 44417 aatattcgggagatccttttcccgaacccatacgcgtttcggtaggtctta 44367

to top

>dbj|AB096923.1| Papaver rhoeas chloroplast rpl16 gene for ribosomal protein large
           subunit 16, partial cds
          Length = 493

 Score =  133 bits (67), Expect = 9e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                       
Query: 607 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||| |||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgacccggt 245

                                                                       
Query: 667 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 726
           ||||| || | ||||||||||||||| || ||||| |||||||||||||| |||||||| 
Sbjct: 244 ttaacgacagatacccaatattcgggagatcccttccccgagcccatacgcgtttccgta 185

                  
Query: 727 ggtctta 733
           |||||||
Sbjct: 184 ggtctta 178

to top

>dbj|AB096922.1| Papaver pseudo-orientale chloroplast rpl16 gene for ribosomal
           protein large subunit 16, partial cds
          Length = 494

 Score =  133 bits (67), Expect = 9e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                       
Query: 607 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||| |||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgacccggt 245

                                                                       
Query: 667 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 726
           ||||| || | ||||||||||||||| || ||||| |||||||||||||| |||||||| 
Sbjct: 244 ttaacgacagatacccaatattcgggagatcccttccccgagcccatacgcgtttccgta 185

                  
Query: 727 ggtctta 733
           |||||||
Sbjct: 184 ggtctta 178

to top

>dbj|AB096921.1| Papaver orientale chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 494

 Score =  133 bits (67), Expect = 9e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                       
Query: 607 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||| |||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgacccggt 245

                                                                       
Query: 667 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 726
           ||||| || | ||||||||||||||| || ||||| |||||||||||||| |||||||| 
Sbjct: 244 ttaacgacagatacccaatattcgggagatcccttccccgagcccatacgcgtttccgta 185

                  
Query: 727 ggtctta 733
           |||||||
Sbjct: 184 ggtctta 178

to top

>dbj|AB077335.1| Allium altaicum plastid DNA, intron region
          Length = 551

 Score =  129 bits (65), Expect = 1e-26
 Identities = 101/113 (89%)
 Strand = Plus / Plus

                                                                       
Query: 610 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 669
           |||||||| ||||||||||| || ||||| |||||||| |||||||| ||||| ||||||
Sbjct: 205 gctgctctggctacagtttctgagactccgcccatttcgtaaagtattcgaccgggttta 264

                                                                
Query: 670 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
           ||||| | ||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 265 acaacagatacccaatattcgggagatccctttcccgaccccatacgtgtttc 317



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 413 catttaaaagggtctgaggttgaatcata 441
           |||||||||||||||||||||||||||||
Sbjct: 543 catttaaaagggtctgaggttgaatcata 515

to top

>gb|DQ069417.1| Nuphar advena ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 396

 Score =  127 bits (64), Expect = 6e-26
 Identities = 112/128 (87%)
 Strand = Plus / Minus

                                                                       
Query: 607 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
           ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| ||| | |||
Sbjct: 353 atagcggctctggctacggtttctgatactccgcccatttcataaagtattcgatccggt 294

                                                                       
Query: 667 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 726
           ||||| |||| |||||||||||| || || ||||| ||||| |||||||||||||||| |
Sbjct: 293 ttaacgacggatacccaatattcaggagatcccttccccgaacccatacgtgtttccgcg 234

                   
Query: 727 ggtcttag 734
           ||||||||
Sbjct: 233 ggtcttag 226

to top

>dbj|AB096920.1| Papaver bracteatum chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 494

 Score =  125 bits (63), Expect = 2e-25
 Identities = 111/127 (87%)
 Strand = Plus / Minus

                                                                       
Query: 607 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||| |||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgacccggt 245

                                                                       
Query: 667 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 726
           ||||| || | |||||||||||| || || ||||| |||||||||||||| |||||||| 
Sbjct: 244 ttaacgacagatacccaatattcaggagatcccttccccgagcccatacgagtttccgta 185

                  
Query: 727 ggtctta 733
           |||||||
Sbjct: 184 ggtctta 178

to top

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  125 bits (63), Expect = 2e-25
 Identities = 177/215 (82%)
 Strand = Plus / Plus

                                                                         
Query: 69    ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
             ||||||||| || || ||||||||||||||||| || ||||| || | ||||||||||  
Sbjct: 79709 ttataatacctcgggtgctaatgaaactattttagtgaaatttaactgtctcaattcccg 79768

                                                                         
Query: 129   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
             ||| || || | ||| | ||||||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 79769 ggcgattgcacaaaagattcgagttccttttggatttccttcttgatcaatgacaactgc 79828

                                                                         
Query: 189   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
             |||||| ||||||||  | |||||||||||||     | ||||| ||||||||| |||||
Sbjct: 79829 agcattatcatcatactgaattattataccgttgctacgtttgagttctttacaagtacg 79888

                                                
Query: 249   tacaattacagctcgaattacttcggatctttcta 283
             ||||||||||||||  || ||||| ||||||||||
Sbjct: 79889 tacaattacagctctgatcacttctgatctttcta 79923



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 118/143 (82%), Gaps = 3/143 (2%)
 Strand = Plus / Plus

                                                                         
Query: 306   tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 365
             ||||||||||||||||| ||  |||||||||  |||||||||  |||||| |||   |||
Sbjct: 79946 tttgattacagcaacaacaatgtcaccaatataagcatatcgtcgattactagc---tcc 80002

                                                                         
Query: 366   tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 425
             || || |||||||||||||| ||  || ||||| ||||| || |||||||| ||| | ||
Sbjct: 80003 taggattcgaatacacatcagttcgcgtgctccgctattatcagctacattcaaatgagt 80062

                                    
Query: 426   ctgaggttgaatcatattatttt 448
              |||||||||||||||| |||||
Sbjct: 80063 ttgaggttgaatcatatcatttt 80085



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                         
Query: 640   cccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggacccc 699
             |||||||||||||||||    || |||||||| || ||||||||||||||||| || || 
Sbjct: 80288 cccatttcataaagtattttcccaggtttaacgacagctacccaatattcgggagaacct 80347

                                               
Query: 700   tttcccgagcccatacgtgtttccgtgggtctta 733
             ||||| || |||||||||||||| || |||||||
Sbjct: 80348 tttcctgaacccatacgtgtttcagtaggtctta 80381

to top

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score =  123 bits (62), Expect = 9e-25
 Identities = 119/138 (86%)
 Strand = Plus / Plus

                                                                         
Query: 64    agtatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaat 123
             |||| |||||||||||| ||||| |||||||||||||| || |||||||||| |||||||
Sbjct: 60553 agtacttataatacttcgggagccaatgaaactattttcgtgaaattcaattgtctcaat 60612

                                                                         
Query: 124   tcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattata 183
             ||||  |||| ||  ||||||||||||||||||||||| || ||||  |||||||| | |
Sbjct: 60613 tcctgagcaaccggaccaaaaactcgagttccttttggatttccttcctgatcaatgaca 60672

                               
Query: 184   accgcagcattgtcatca 201
             || || ||||||||||||
Sbjct: 60673 acggctgcattgtcatca 60690



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 97/114 (85%)
 Strand = Plus / Plus

                                                                         
Query: 609   agctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttt 668
             |||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||| |
Sbjct: 61101 agctgctctagcgacggtttcggatactccgcccatttcataaagtattcgacctggtct 61160

                                                                   
Query: 669   aacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
              |  || | ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 61161 gatgacagatacccaatattcgggagatcctttcccggaacccatacgtgtttc 61214



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 361   gctcctatgactcgaatacacatcaattttcgagctccact 401
             |||||||  |||||||||||||| | |||||| ||||||||
Sbjct: 60847 gctcctagaactcgaatacacattatttttcgggctccact 60887

to top

>dbj|AB199893.1| Angelica acutiloba var. iwatensis chloroplast rpl16 gene for
           ribosomal protein large subunit 16, partial cds, and
           rpl16-rpl14 spacer
          Length = 463

 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 278 tactccacccatttcataaagtattcgacctggtttaacaacagctacccaatattcagg 219

                                                    
Query: 693 ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
           ||| || || ||||| |||||||||||||| | ||||||||
Sbjct: 218 ggatcctttccccgaacccatacgtgtttctgcgggtctta 178

to top

>dbj|AB199892.1| Angelica acutiloba var. sugiyamae chloroplast rpl16 gene for
           ribosomal protein large subunit 16, partial cds, and
           rpl16-rpl14 spacer
          Length = 463

 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 278 tactccacccatttcataaagtattcgacctggtttaacaacagctacccaatattcagg 219

                                                    
Query: 693 ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
           ||| || || ||||| |||||||||||||| | ||||||||
Sbjct: 218 ggatcctttccccgaacccatacgtgtttctgcgggtctta 178

to top

>dbj|AB199891.1| Angelica acutiloba chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds, and rpl16-rpl14 spacer
          Length = 463

 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 278 tactccacccatttcataaagtattcgacctggtttaacaacagctacccaatattcagg 219

                                                    
Query: 693 ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
           ||| || || ||||| |||||||||||||| | ||||||||
Sbjct: 218 ggatcctttccccgaacccatacgtgtttctgcgggtctta 178

to top

>emb|X03834.1|CHSOL16 Spirodela oligorhiza chloroplast gene for ribosomal protein L16
          Length = 2064

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                        
Query: 607  atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
            ||||||| ||| || |||||||| ||||| ||||| |||||||||||||| |||||||||
Sbjct: 1838 atagctgttctggcgacagtttcggataccccccctatttcataaagtattcgacctggt 1779

                                                                 
Query: 667  ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgt 719
            |||||||||| |||||| |||||||| || ||||| ||||| |||||||||||
Sbjct: 1778 ttaacaacggatacccagtattcgggagatcccttccccgaacccatacgtgt 1726



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 409  gctacatttaaaagggtctgaggttgaatcatattatttt 448
            |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 2049 gctacattcaaaagggtctgaggttgaatcatatcatttt 2010

to top

>emb|X68048.1|CHPVHISG Phaseolus vulgaris chloroplast DNA for tRNA-His gene region
          Length = 1698

 Score =  117 bits (59), Expect = 5e-23
 Identities = 176/215 (81%)
 Strand = Plus / Plus

                                                                        
Query: 69   ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
            ||||||||| || || ||||||||||||||||| || ||||| || | ||||||||||  
Sbjct: 954  ttataatacctcgggtgctaatgaaactattttagtgaaatttaactgtctcaattcccg 1013

                                                                        
Query: 129  ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 188
            ||| || |||| ||| | ||||||||||||||| || |||| ||||||||||| ||| ||
Sbjct: 1014 ggcgattgcgcaaaagattcgagttccttttggatttccttcttgatcaattacaactgc 1073

                                                                        
Query: 189  agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 248
            |||||| ||||||||  | |||||||||||||     | ||| | || |||||| || ||
Sbjct: 1074 agcattatcatcatactgaattattataccgttgctacgttttagttgtttacaagtccg 1133

                                               
Query: 249  tacaattacagctcgaattacttcggatctttcta 283
            ||||||||||||||  || ||||| ||||||||||
Sbjct: 1134 tacaattacagctctgatcacttctgatctttcta 1168



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                        
Query: 633  tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
            |||||| |||||||||||||||||    || ||||||||||| |||||||||||||||||
Sbjct: 1529 tactccacccatttcataaagtattttcccaggtttaacaacagctacccaatattcggg 1588

                                                     
Query: 693  ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
              | || ||||| || ||||||||| |||| || |||||||
Sbjct: 1589 aaatccttttcctgaacccatacgtctttcagtaggtctta 1629

to top

>gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete sequence
          Length = 130054

 Score =  115 bits (58), Expect = 2e-22
 Identities = 249/310 (80%), Gaps = 7/310 (2%)
 Strand = Plus / Plus

                                                                         
Query: 141   aaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatc 200
             ||||| ||||||||||||||| || |||| || |||||| | |||||| ||||| |||||
Sbjct: 30545 aaaaattcgagttccttttggatttccttctttatcaatgagaaccgccgcattatcatc 30604

                                                                         
Query: 201   atagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagc 260
             |||    ||||||||||| |     | ||| | ||||||||| |||||||||||||||||
Sbjct: 30605 atactttattattataccattactacgttttagttctttacaagtacgtacaattacagc 30664

                                                                         
Query: 261   tcgaattacttcggatctttctagag--gcatttggggcaatgcgtctttgattacagca 318
              |  || ||||| |||||||||| ||  | ||||||  |  ||| | |||||||||||||
Sbjct: 30665 cctgatcacttcagatctttctaaagatgaatttggtac--tgcttttttgattacagca 30722

                                                                         
Query: 319   acaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaata 378
             |||| ||  |||||||||  |||||| ||  |||||| |||   |||||||| |||||||
Sbjct: 30723 acaacaatgtcaccaatataagcataccgtcgattactagc---tcctatgattcgaata 30779

                                                                         
Query: 379   cacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatc 438
             ||||||||||  || ||||| ||||| || ||||||||||||  ||| ||||||||||||
Sbjct: 30780 cacatcaattcgcgggctccgctattatcggctacatttaaataggtttgaggttgaatc 30839

                       
Query: 439   atattatttt 448
             |||| |||||
Sbjct: 30840 atatcatttt 30849



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 138/171 (80%)
 Strand = Plus / Plus

                                                                         
Query: 563   gaataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagcta 622
             |||| |||||| ||||||| ||||||||    |||||||| || |||||   ||||||||
Sbjct: 30978 gaatgaattgagttcgtataggcattttggatgccgctattgaaatagcctttctagcta 31037

                                                                         
Query: 623   cagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccc 682
              | |||| |  || || |||||||||||||||||    || |||||||| || |||||||
Sbjct: 31038 tattttctgggacccctcccatttcataaagtattttgccgggtttaacgacagctaccc 31097

                                                                
Query: 683   aatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
             |||||||||| || || |||||||| |||||||| ||||| || |||||||
Sbjct: 31098 aatattcgggagatccttttcccgaacccatacgcgtttcggtaggtctta 31148

to top

>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence
          Length = 140624

 Score =  115 bits (58), Expect = 2e-22
 Identities = 249/310 (80%), Gaps = 7/310 (2%)
 Strand = Plus / Minus

                                                                          
Query: 141    aaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatc 200
              ||||| ||||||||||||||| || |||| || |||||| | |||||| ||||| |||||
Sbjct: 114958 aaaaattcgagttccttttggatttccttctttatcaatgagaaccgccgcattatcatc 114899

                                                                          
Query: 201    atagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagc 260
              |||    ||||||||||| |     | ||| | ||||||||| |||||||||||||||||
Sbjct: 114898 atactttattattataccattactacgttttagttctttacaagtacgtacaattacagc 114839

                                                                          
Query: 261    tcgaattacttcggatctttctagag--gcatttggggcaatgcgtctttgattacagca 318
               |  || ||||| |||||||||| ||  | ||||||  |  ||| | |||||||||||||
Sbjct: 114838 cctgatcacttcagatctttctaaagatgaatttggtac--tgcttttttgattacagca 114781

                                                                          
Query: 319    acaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaata 378
              |||| ||  |||||||||  |||||| ||  |||||| |||   |||||||| |||||||
Sbjct: 114780 acaacaatgtcaccaatataagcataccgtcgattactagc---tcctatgattcgaata 114724

                                                                          
Query: 379    cacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatc 438
              ||||||||||  || ||||| ||||| || ||||||||||||  ||| ||||||||||||
Sbjct: 114723 cacatcaattcgcgggctccgctattatcggctacatttaaataggtttgaggttgaatc 114664

                        
Query: 439    atattatttt 448
              |||| |||||
Sbjct: 114663 atatcatttt 114654



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                          
Query: 563    gaataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagcta 622
              |||| |||||| ||||||| ||||||||    |||||||| || |||||   ||||||||
Sbjct: 114525 gaatgaattgagttcgtataggcattttggatgccgctattgaaatagcctttctagcta 114466

                                                                          
Query: 623    cagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccc 682
               | |||| |  || || |||||||||||||||||    || |||||||| || |||||||
Sbjct: 114465 tattttctgggacccctcccatttcataaagtattttgccgggtttaacgacagctaccc 114406

                                                                 
Query: 683    aatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
              |||||||||| || || |||||||| |||||||| ||||| || |||||||
Sbjct: 114405 aatattcgggagatccttttcccgaacccatacgcgtttcggtaggtctta 114355

to top

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score =  115 bits (58), Expect = 2e-22
 Identities = 118/138 (85%)
 Strand = Plus / Plus

                                                                         
Query: 64    agtatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaat 123
             |||| |||||| ||||| ||||| |||||||||||||| || |||||||||| |||||||
Sbjct: 58649 agtacttataagacttcgggagccaatgaaactattttagtgaaattcaattgtctcaat 58708

                                                                         
Query: 124   tcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattata 183
             ||||  |||| ||  ||||||||||||||||||||||| || ||||  |||||||| | |
Sbjct: 58709 tcctgagcaaccggaccaaaaactcgagttccttttggatttccttcctgatcaatgaca 58768

                               
Query: 184   accgcagcattgtcatca 201
             || || ||||||||||||
Sbjct: 58769 acggctgcattgtcatca 58786



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 98/114 (85%)
 Strand = Plus / Plus

                                                                         
Query: 609   agctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttt 668
             |||||||||||| || ||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct: 59191 agctgctctagcgacggtttcggatactccgcccatttcataaagtattcgacctggttt 59250

                                                                   
Query: 669   aacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
              |  || | ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 59251 gatgacagatacccaatattcgggagatcctttcccggaacccatacgtgtttc 59304



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 361   gctcctatgactcgaatacacatcaattttcgagctccact 401
             |||||||  |||||||||||||| | |||||| ||||||||
Sbjct: 58943 gctcctagaactcgaatacacattatttttcgggctccact 58983

to top

>dbj|AB077337.1| Saussurea involucrata plastid DNA, intron region
          Length = 541

 Score =  109 bits (55), Expect = 1e-20
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 615 tctagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaac 674
           |||||||| | |||| | |||||| |||||||||||||| || |||||||||||||||||
Sbjct: 323 tctagctatattttctgttactccacccatttcataaaggattcgacctggtttaacaac 264

                                                                      
Query: 675 ggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
            ||||||||||||||||| || || || || || |||||||||||||| | ||||||||
Sbjct: 263 agctacccaatattcgggagagcctttacctgaacccatacgtgtttctgcgggtctta 205



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 413 catttaaaagggtctgaggttgaatcatattatttt 448
           |||||||||||||||||||||||||||||| |||||
Sbjct: 533 catttaaaagggtctgaggttgaatcatatgatttt 498

to top

>gb|DQ069418.1| Ranunculus macranthus ribosomal protein L16 (rpl16) gene, partial
           cds; chloroplast
          Length = 405

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 598 gctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtata 657
           ||||| || |||||| |||| |||||| |||| |||||||| ||||||||||||||||| 
Sbjct: 362 gctatagaaatagcttctctggctacaatttctgatactccacccatttcataaagtatt 303

                                                                       
Query: 658 cgacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgt 717
           ||||| |||||||| |||  ||||||| ||||||| || || || || || |||||||||
Sbjct: 302 cgaccaggtttaacgacgaatacccaaaattcgggagatcctttcccggaacccatacgt 243

                
Query: 718 gtttc 722
           |||||
Sbjct: 242 gtttc 238

to top

>dbj|AB201297.1| Prunus campanulata chloroplast rpl16 gene for ribosomal protein
           L16, partial cds, specimen_voucher:Cherry-Ohta 161 (TFA)
          Length = 414

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| | ||||||||||||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 250 tactccgctcatttcataaagtattctaccgggtttaacaacagctacccaatattcggg 191

                                                    
Query: 693 ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
            || || || ||||| |||||||||||||| || |||||||
Sbjct: 190 agatcctttacccgaacccatacgtgtttctgtaggtctta 150

to top

>dbj|AB201296.1| Prunus pseudocerasus chloroplast rpl16 gene for ribosomal protein
           L16, partial cds, specimen_voucher:Cherry-Ohta 009 (TFA)
          Length = 419

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| | ||||||||||||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 250 tactccgctcatttcataaagtattctaccgggtttaacaacagctacccaatattcggg 191

                                                    
Query: 693 ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
            || || || ||||| |||||||||||||| || |||||||
Sbjct: 190 agatcctttacccgaacccatacgtgtttctgtaggtctta 150

to top

>dbj|AB201295.1| Prunus maximowiczii chloroplast rpl16 gene for ribosomal protein
           L16, partial cds, specimen_voucher:Cherry-Ohta 158 (TFA)
          Length = 413

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| | ||||||||||||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 250 tactccgctcatttcataaagtattctaccgggtttaacaacagctacccaatattcggg 191

                                                    
Query: 693 ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
            || || || ||||| |||||||||||||| || |||||||
Sbjct: 190 agatcctttacccgaacccatacgtgtttctgtaggtctta 150

to top

>dbj|AB201294.1| Prunus subhirtella var. ascendens chloroplast rpl16 gene for
           ribosomal protein L16, partial cds,
           specimen_voucher:Cherry-Ohta 152 (TFA)
          Length = 419

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| | ||||||||||||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 250 tactccgctcatttcataaagtattctaccgggtttaacaacagctacccaatattcggg 191

                                                    
Query: 693 ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
            || || || ||||| |||||||||||||| || |||||||
Sbjct: 190 agatcctttacccgaacccatacgtgtttctgtaggtctta 150

to top

>dbj|AB201293.1| Prunus apetala chloroplast rpl16 gene for ribosomal protein L16,
           partial cds, specimen_voucher:Cherry-Ohta 093 (TFA)
          Length = 412

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| | ||||||||||||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 250 tactccgctcatttcataaagtattctaccgggtttaacaacagctacccaatattcggg 191

                                                    
Query: 693 ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
            || || || ||||| |||||||||||||| || |||||||
Sbjct: 190 agatcctttacccgaacccatacgtgtttctgtaggtctta 150

to top

>dbj|AB201292.1| Prunus apetala chloroplast rpl16 gene for ribosomal protein L16,
           partial cds, specimen_voucher:Cherry-Ohta 164 (TFA)
          Length = 413

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| | ||||||||||||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 250 tactccgctcatttcataaagtattctaccgggtttaacaacagctacccaatattcggg 191

                                                    
Query: 693 ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
            || || || ||||| |||||||||||||| || |||||||
Sbjct: 190 agatcctttacccgaacccatacgtgtttctgtaggtctta 150

to top

>dbj|AB112068.1| Scutellaria baicalensis chloroplast rpl16 gene for ribosomal
           protein large subunit 16, partial cds
          Length = 485

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 100/117 (85%)
 Strand = Plus / Minus

                                                                       
Query: 617 tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 676
           |||||| | |||||| |||||| |||||||| || ||||| |  || ||||||||||| |
Sbjct: 294 tagctatattttcagttactccacccatttcgtatagtattctccccggtttaacaacag 235

                                                                    
Query: 677 ctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
           ||||||||||||| ||||| || || ||||| |||||||||||||||| ||||||||
Sbjct: 234 ctacccaatattcaggggatcctttccccgaacccatacgtgtttccgcgggtctta 178

to top

>gb|M60180.1|OBECPRPB O.ammophila ribosomal protein L14 and S8 (rpl14, rps8) genes, 5'
           end and 3' end
          Length = 625

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                       
Query: 69  ttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctc 128
           ||||||||| ||||| ||||||||||||||||| || ||| | || ||||||||||| | 
Sbjct: 524 ttataatacctcaggtgctaatgaaactattttagtgaaacttaactctctcaattcgtg 583

                                            
Query: 129 ggcaatcgcgccaaaaactcgagttccttttgg 161
           ||||||||| ||||||||||| |||||||||||
Sbjct: 584 ggcaatcgcaccaaaaactcgggttccttttgg 616

to top

>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 106/126 (84%)
 Strand = Plus / Minus

                                                                         
Query: 76    acttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatc 135
             |||||||||||||| ||||||||||| |||||||| || |||||||||||   |||||  
Sbjct: 41481 acttcaggagctaaagaaactattttagtaaaatttaagtctctcaattctctggcaact 41422

                                                                         
Query: 136   gcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattg 195
             |  ||||||||||| |||||| |||| ||||||| |||||  || | |||||||||||| 
Sbjct: 41421 ggaccaaaaactcgtgttcctcttggattgccttcttgattgatgacaaccgcagcatta 41362

                   
Query: 196   tcatca 201
             ||||||
Sbjct: 41361 tcatca 41356



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 373   cgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggt 432
             ||||||||||| |  ||||||||||| || ||||| ||||||||||||   | |||||||
Sbjct: 41187 cgaatacacatgagctttcgagctccgctgttgtcggctacatttaaataagactgaggt 41128

                     
Query: 433   tgaatcat 440
             ||||||||
Sbjct: 41127 tgaatcat 41120



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 642   catttcataaagtatacgacctggtttaacaacggctacccaatattc 689
             |||||| |||||||| |  |||||||| ||||| ||||||||||||||
Sbjct: 40947 catttcgtaaagtattcttcctggttttacaactgctacccaatattc 40900

to top

>dbj|AB077333.1| Ferula feruloides plastid DNA, intron region
          Length = 531

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 80/90 (88%), Gaps = 1/90 (1%)
 Strand = Plus / Minus

                                                                       
Query: 645 ttcataaagtatacgacctggtttaac-aacggctacccaatattcgggggacccctttc 703
           |||||||||||| |||||||||||||| ||| |||||||||||||| ||||| || || |
Sbjct: 290 ttcataaagtattcgacctggtttaaccaacagctacccaatattcaggggatcctttac 231

                                         
Query: 704 ccgagcccatacgtgtttccgtgggtctta 733
           |||| |||||||||||||| | ||||||||
Sbjct: 230 ccgaacccatacgtgtttctgcgggtctta 201



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 413 catttaaaagggtctgaggttgaa 436
           ||||||||||||||||||||||||
Sbjct: 523 catttaaaagggtctgaggttgaa 500

to top

>dbj|AB112072.1| Scutellaria lateriflora chloroplast rpl16 gene for ribosomal
           protein large subunit 16, partial cds
          Length = 485

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                       
Query: 617 tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 676
           |||||| | |||||| |||||| |||||||| || ||||| |  || ||||||||||| |
Sbjct: 294 tagctatattttcagttactccacccatttcgtatagtattctccccggtttaacaacag 235

                                                                    
Query: 677 ctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
           ||||||||||||| ||||| || || ||||| ||||||||||||||||  |||||||
Sbjct: 234 ctacccaatattcaggggatcctttccccgaccccatacgtgtttccgcaggtctta 178

to top

>dbj|AB112071.1| Scutellaria indica chloroplast rpl16 gene for robosomal protein
           large subunit 16, partial cds
          Length = 484

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                       
Query: 617 tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 676
           |||||| | |||||| |||||| |||||||| || ||||| |  || ||||||||||| |
Sbjct: 294 tagctatattttcagttactccacccatttcgtatagtattctccccggtttaacaacag 235

                                                                    
Query: 677 ctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
           ||||||||||||| ||||| || || ||||| ||||||||||||||||  |||||||
Sbjct: 234 ctacccaatattcaggggatcctttccccgaacccatacgtgtttccgcaggtctta 178

to top

>dbj|AB112069.1| Scutellaria galericulata chloroplast rpl16 gene for ribosomal
           protein large subunit 16, partial cds
          Length = 485

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                       
Query: 617 tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 676
           |||||| | |||||| |||||| |||||||| || ||||| |  || ||||||||||| |
Sbjct: 294 tagctatattttcagttactccacccatttcgtatagtattctccccggtttaacaacag 235

                                                                    
Query: 677 ctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
           ||||||||||||| ||||| || || ||||| ||||||||||||||||  |||||||
Sbjct: 234 ctacccaatattcaggggatcctttccccgaacccatacgtgtttccgcaggtctta 178

to top

>dbj|AB112067.1| Scutellaria altissima chloroplast rpl16 gene for ribosormal protein
           large subunit 16, partial cds
          Length = 485

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                       
Query: 617 tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 676
           |||||| | |||||| |||||| |||||||| || ||||| |  || ||||||||||| |
Sbjct: 294 tagctatattttcagttactccacccatttcgtatagtattctccccggtttaacaacag 235

                                                                    
Query: 677 ctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
           ||||||||||||| ||||| || || ||||| ||||||||||||||||  |||||||
Sbjct: 234 ctacccaatattcaggggatcctttccccgaacccatacgtgtttccgcaggtctta 178

to top

>gb|DQ069416.1| Ginkgo biloba ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 414

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                       
Query: 607 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
           |||||||||||||||||||| || |||||||| || |||||||||||||| |||||||| 
Sbjct: 356 atagctgctctagctacagtctctgatactccgcctatttcataaagtattcgacctggc 297

                                                                   
Query: 667 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            | || || | |||||| |||||||  || || || ||||| ||||||||||||||
Sbjct: 296 ctgacgacagatacccagtattcggtagatcctttccccgaacccatacgtgtttc 241

to top

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Plus

                                                                         
Query: 66    tatttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattc 125
             ||||||||| ||||| |||||||| ||||||||||| ||||||||  ||||||| |||||
Sbjct: 76250 tatttataaaacttctggagctaacgaaactattttagtaaaattagattctcttaattc 76309

                                                                         
Query: 126   ctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataac 185
                 ||||| |  ||||||||||||||||||||||| || |||| ||||| ||| | |||
Sbjct: 76310 tctagcaattggaccaaaaactcgagttccttttggatttccttcttgattaataacaac 76369

                             
Query: 186   cgcagcattgtcatca 201
              || ||||| ||||||
Sbjct: 76370 tgctgcattatcatca 76385



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                         
Query: 363   tcctatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaag 422
             |||||| |||||||| ||||| | |||||||||||||||||| ||||| |||||||||  
Sbjct: 76544 tcctataactcgaatgcacattagttttcgagctccactattatctgcaacatttaaata 76603

                               
Query: 423   ggtctgaggttgaatcat 440
              || ||||||||||||||
Sbjct: 76604 agtttgaggttgaatcat 76621



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 232   aattctttacatgtacgtacaattacagctc 262
             ||||||||||| |||||||||||||||||||
Sbjct: 76416 aattctttacacgtacgtacaattacagctc 76446



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                         
Query: 613   gctctagctacagtttcagatactccccccatttcataaagtatacgacctggtttaaca 672
             |||||||| | | |||||||||| || |  ||||||||||||||    || |||||||| 
Sbjct: 76804 gctctagcaatattttcagatacgccactaatttcataaagtatttttccaggtttaact 76863

                                                               
Query: 673   acggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
             || |||||||||||||| || || || || ||||| ||||| ||||||||
Sbjct: 76864 acagctacccaatattctggagatcctttacccgatcccattcgtgtttc 76913

to top

>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0560B06
          Length = 161720

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                          
Query: 621    tacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctac 680
              |||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||
Sbjct: 147642 tacagtttcagatactccgcccttttcataaagtactcgacctggtttaacaacggctac 147583

to top

>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete
             Sequence, complete sequence
          Length = 105198

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                         
Query: 621   tacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctac 680
             |||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||
Sbjct: 85252 tacagtttcagatactccgcccttttcataaagtactcgacctggtttaacaacggctac 85193

to top

>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0043B10
          Length = 167399

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                          
Query: 621    tacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctac 680
              |||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||
Sbjct: 103556 tacagtttcagatactccgcccttttcataaagtactcgacctggtttaacaacggctac 103497

to top

>dbj|AB116628.1| Cistanche deserticola chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 486

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 564 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 623
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 624 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 683
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 684 atattcgggggacccctttccc-gagcccatacgtgtttc 722
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

to top

>dbj|AB116625.1| Cistanche deserticola chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds, strain: CdK/2
          Length = 484

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 564 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 623
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 624 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 683
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 684 atattcgggggacccctttccc-gagcccatacgtgtttc 722
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

to top

>dbj|AB116624.1| Cistanche deserticola chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds, strain: CdK/1
          Length = 484

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 564 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 623
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 624 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 683
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 684 atattcgggggacccctttccc-gagcccatacgtgtttc 722
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

to top

>dbj|AB062414.1| Cistanche salsa chloroplast rpl16 gene for ribosomal protein large
           subunit 16, partial cds, country:Turkey:Konya
          Length = 485

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 564 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 623
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 624 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 683
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 684 atattcgggggacccctttccc-gagcccatacgtgtttc 722
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

to top

>dbj|AB062413.1| Cistanche salsa chloroplast rpl16 gene for ribosomal protein large
           subunit 16, partial cds, country:China:Xinjian
          Length = 486

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 564 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 623
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 624 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 683
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 684 atattcgggggacccctttccc-gagcccatacgtgtttc 722
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

to top

>dbj|AB062412.1| Cistanche salsa chloroplast rpl16 gene for ribosomal protein large
           subunit 16, partial cds, country:China:Ningxia, Yanchi
          Length = 485

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 564 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 623
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 624 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 683
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 684 atattcgggggacccctttccc-gagcccatacgtgtttc 722
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

to top

>dbj|AB062411.1| Cistanche deserticola chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 486

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 564 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 623
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 624 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 683
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 684 atattcgggggacccctttccc-gagcccatacgtgtttc 722
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

to top

>emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0049H08,
             complete sequence
          Length = 186642

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                                
Query: 245   tacgtacaattacagctcgaattacttcggatctttctagaggcatttggg 295
             |||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 94927 tacgtacaattacagctcaaattacttcggatctttccagaggcatttggg 94877

to top

>dbj|AB077439.1| Sophora alopecuroides plastid DNA, intron region
          Length = 569

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 139/171 (81%)
 Strand = Plus / Minus

                                                                       
Query: 563 gaataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagcta 622
           |||| |||||| ||||||| ||||||||    || ||||| || ||||||  ||||||||
Sbjct: 384 gaatgaattgagttcgtataggcattttcgatgctgctattgacatagcttttctagcta 325

                                                                       
Query: 623 cagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccc 682
            |||||| || || ||   |||||||||||||||    || |||||||| || |||||||
Sbjct: 324 tagtttctgagaccccattcatttcataaagtattttgccgggtttaacgacagctaccc 265

                                                              
Query: 683 aatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
           |||||||||| || ||||||||||| |||||||| ||||| || |||||||
Sbjct: 264 aatattcgggagatccctttcccgaacccatacgcgtttcggtaggtctta 214



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                               
Query: 413 catttaaaagggtctgaggttgaatcatattatttt 448
           ||||||||||||||||||||||||||||||||||||
Sbjct: 561 catttaaaagggtctgaggttgaatcatattatttt 526

to top

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 114/135 (84%), Gaps = 2/135 (1%)
 Strand = Plus / Plus

                                                                         
Query: 68    tttataatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcct 127
             |||||||||||||||| ||||| ||||||||||| ||||||||  |||| |  ||||| |
Sbjct: 79910 tttataatacttcaggtgctaacgaaactattttagtaaaattagattcacgtaattc-t 79968

                                                                         
Query: 128   cg-gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 186
             || ||||  | ||||||||||||||||||||| || || |||| ||||| ||| ||||| 
Sbjct: 79969 cgtgcaacagggccaaaaactcgagttcctttaggatttccttcttgattaataataact 80028

                            
Query: 187   gcagcattgtcatca 201
             |||||||| ||||||
Sbjct: 80029 gcagcattatcatca 80043



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Plus

                                                                         
Query: 607   atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
             |||||||||||||| ||| |||||| |||||| |  |||||||| | ||| | |||||| 
Sbjct: 80507 atagctgctctagcaacactttcaggtactccgcttatttcatataatattctacctggc 80566

                                                                     
Query: 667   ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
             |||||||| | |||||||||||| || || || ||||| || ||||||||||||||
Sbjct: 80567 ttaacaacagatacccaatattctggtgaaccttttcctgaacccatacgtgtttc 80622



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 376   atacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttga 435
             |||||||| ||||| || ||||||||||| || ||||||||||||   || |||||||||
Sbjct: 80215 atacacattaatttgcgcgctccactattatcagctacatttaaataagtttgaggttga 80274

                  
Query: 436   atcat 440
             |||||
Sbjct: 80275 atcat 80279

to top

>dbj|AB062415.1| Cistanche tubulosa chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 484

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 130/159 (81%)
 Strand = Plus / Minus

                                                                       
Query: 564 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 623
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 624 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 683
           | |||| | |||||| | ||||||||| ||||| ||    ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgctcatttcatatagtattcgtttcggtttaacaacagctaccca 228

                                                  
Query: 684 atattcgggggacccctttcccgagcccatacgtgtttc 722
           |||||||||||| || || ||||| ||||||||||||||
Sbjct: 227 atattcgggggatcctttccccgaacccatacgtgtttc 189

to top

>dbj|AB116627.1| Cistanche sinensis chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds, strain: CsiCn/2
          Length = 498

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| ||||||||||| |||||  |  ||||||||||||| |||||||||||||| ||
Sbjct: 278 tactccacccatttcatatagtatttgtgctggtttaacaacagctacccaatattcagg 219

                                         
Query: 693 ggacccctttcccgagcccatacgtgtttc 722
           ||| || || ||||| ||||||||||||||
Sbjct: 218 ggatcctttccccgaacccatacgtgtttc 189

to top

>dbj|AB116626.1| Cistanche sinensis chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds, strain: CsiCn/1
          Length = 498

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| ||||||||||| |||||  |  ||||||||||||| |||||||||||||| ||
Sbjct: 278 tactccacccatttcatatagtatttgtgctggtttaacaacagctacccaatattcagg 219

                                         
Query: 693 ggacccctttcccgagcccatacgtgtttc 722
           ||| || || ||||| ||||||||||||||
Sbjct: 218 ggatcctttccccgaacccatacgtgtttc 189

to top

>dbj|AB087470.1| Anthoceros formosae chloroplast rpl16 mRNA for ribosomal protein
           L16, complete cds
          Length = 411

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| || || ||||||||||| | |  |||||||||||||| ||||||| |||| ||
Sbjct: 85  tactccacctatctcataaagtatcctatttggtttaacaacggatacccaaaattcagg 144

                                         
Query: 693 ggacccctttcccgagcccatacgtgtttc 722
           ||| ||||||||||| ||||||||||||||
Sbjct: 145 ggaaccctttcccgaacccatacgtgtttc 174

to top

>dbj|AB112070.1| Scutellaria incana chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 485

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 98/117 (83%)
 Strand = Plus / Minus

                                                                       
Query: 617 tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 676
           |||||| | |||||| |||||| |||||||| || ||||| |  || ||||||||||| |
Sbjct: 294 tagctatattttcagttactccacccatttcgtatagtattctccccggtttaacaacag 235

                                                                    
Query: 677 ctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 733
           ||||||||||||| ||||| || || ||||| |||| |||||||||||  |||||||
Sbjct: 234 ctacccaatattcaggggatcctttccccgaacccaaacgtgtttccgcaggtctta 178

to top

>dbj|AB087469.1| Anthoceros formosae chloroplast rpl14 mRNA for ribosomal protein
           L14, complete cds
          Length = 460

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 372 tcgaatacacatcaattttcgagctccactattgtctgctacatttaaa 420
           |||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 322 tcgaatacacatcagttttcgagctccactgttgtctgctacatttaaa 370



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 234 ttctttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcat 290
           ||||||||| ||||||||||||||||||| || |||||| ||| ||| |||||||||
Sbjct: 187 ttctttacaagtacgtacaattacagctctaactacttctgatttttttagaggcat 243

to top

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                               
Query: 372    tcgaatacacatcaattttcgagctccactattgtctgctacatttaaa 420
              |||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 100021 tcgaatacacatcagttttcgagctccactgttgtctgctacatttaaa 100069



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                          
Query: 663    tggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
              |||||||||||||| ||||||| |||| ||||| ||||||||||| ||||||||||||||
Sbjct: 100421 tggtttaacaacggatacccaaaattcaggggaaccctttcccgaacccatacgtgtttc 100480



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                      
Query: 234   ttctttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcat 290
             ||||||||| ||||||||||||||||||| || |||||| ||| ||| |||||||||
Sbjct: 99886 ttctttacaagtacgtacaattacagctctaactacttctgatttttttagaggcat 99942

to top

>gb|M80799.1|VIRCPRPL Vigna unguiculata chloroplast ribosomal protein (L16 and L14)
           genes, 3' and 5' end respectively
          Length = 1268

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| |||||||||||||||||    || ||||||||||| |||||||||||||||||
Sbjct: 921 tactccacccatttcataaagtattttcccaggtttaacaacagctacccaatattcggg 862

                                                    
Query: 693 ggacccctttcccgagcccatacgtgtttccgtgggtctta 733
             | || ||||| || |||||||||||||| || |||||||
Sbjct: 861 aaatccttttcctgaacccatacgtgtttcagtaggtctta 821



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 116/143 (81%), Gaps = 3/143 (2%)
 Strand = Plus / Minus

                                                                        
Query: 306  tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 365
            ||||||||||||||||| ||  || ||||||  |||||||||  |||||| |||   |||
Sbjct: 1258 tttgattacagcaacaacaatgtcgccaatataagcatatcgtcgattactagc---tcc 1202

                                                                        
Query: 366  tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 425
            || || |||||||||||||| ||  || ||||| || || || |||||||| ||| | ||
Sbjct: 1201 taggattcgaatacacatcagttcacgtgctccgctgttatccgctacattcaaatgagt 1142

                                   
Query: 426  ctgaggttgaatcatattatttt 448
             |||||||||||||||| |||||
Sbjct: 1141 ttgaggttgaatcatatcatttt 1119

to top

>gb|M60179.1|OBECPRPA O.ammophila ribosomal protein L14 and L16 (rpl14, rpl16) genes, 3'
           end and 5' end
          Length = 542

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 112/135 (82%), Gaps = 3/135 (2%)
 Strand = Plus / Plus

                                                                       
Query: 314 cagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactc 373
           ||||||||||||  ||||| ||| ||||||||||  |||||| |||   ||| |||| ||
Sbjct: 1   cagcaacaataatgtcaccgatatgagcatatcgacgattactagc---tccgatgattc 57

                                                                       
Query: 374 gaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggtt 433
           |||||||||| |||| |||||| ||||| || || || ||||| ||| |||| |||||||
Sbjct: 58  gaatacacattaattctcgagccccactgttatccgcgacattcaaacgggtttgaggtt 117

                          
Query: 434 gaatcatattatttt 448
           ||||||||| |||||
Sbjct: 118 gaatcatatcatttt 132



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 634 actccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggg 693
           ||||| |||||||||||||| || | ||| ||||| || || ||||||||||||||||||
Sbjct: 351 actccacccatttcataaaggattctacccggtttgacgacagctacccaatattcgggg 410

                                        
Query: 694 gacccctttcccgagcccatacgtgtttc 722
              || || ||||| ||||||||||||||
Sbjct: 411 tttcctttacccgaacccatacgtgtttc 439

to top

>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome
          Length = 154373

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                
Query: 68   tttataatacttcaggagctaatgaaactattttggtaaaattcaattctct 119
            ||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 5586 tttataatacttcaggagccaatgaaactattttagtaaaattgaattctct 5535



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 607  atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 666
            |||||||||||||| | |||||| | ||  || || | |||||| ||||| | ||| |||
Sbjct: 4976 atagctgctctagcaatagtttctggtatcccacctacttcatagagtattctaccaggt 4917

                                                                    
Query: 667  ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            |||||||| | |||||||||||| ||||| || ||||| || |||||||| |||||
Sbjct: 4916 ttaacaacagatacccaatattctggggatccttttcctgaacccatacgcgtttc 4861



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 372  tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 431
            ||||||||||||   ||||  ||||||||| |||||||||||||| |||   || |||||
Sbjct: 5285 tcgaatacacattggttttttagctccactgttgtctgctacattcaaatacgtttgagg 5226

                        
Query: 432  ttgaatcatatt 443
            ||||||||||||
Sbjct: 5225 ttgaatcatatt 5214

to top

>emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095H06,
             complete sequence
          Length = 126447

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 73/84 (86%), Gaps = 4/84 (4%)
 Strand = Plus / Plus

                                                                         
Query: 236   ctttacatgtacgtacaattacagctcgaattact----tcggatctttctagaggcatt 291
             ||||||||||||||||||||||||||||  |||||    || ||||||||||||||||||
Sbjct: 89363 ctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttctagaggcatt 89422

                                     
Query: 292   tggggcaatgcgtctttgattaca 315
             | ||||| ||| |||||| |||||
Sbjct: 89423 ttgggcactgcttctttggttaca 89446

to top

>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_H01
          Length = 121377

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                          
Query: 123    ttcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattat 182
              ||||||||| |||| ||||||||| |||||||||||||| || | ||||||| |||| ||
Sbjct: 117502 ttcctcggcgatcgtgccaaaaacgcgagttccttttggatttcttttttgaccaatgat 117561

                                
Query: 183    aaccgcagcattgtcatc 200
              |||||  |||||||||||
Sbjct: 117562 aaccgttgcattgtcatc 117579

to top

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                         
Query: 372   tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 431
             |||||||||||||||||||||||||||||| ||||||| ||| ||||||    | |||||
Sbjct: 79713 tcgaatacacatcaattttcgagctccactgttgtctgttacttttaaataactttgagg 79772

                      
Query: 432   ttgaatcat 440
             |||||||||
Sbjct: 79773 ttgaatcat 79781



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 643   atttcataaagtatacgacctggtttaacaacggctacccaatattcgggggaccccttt 702
             |||||||| ||||| ||||||  |||||| || |||||||||||||| || || || |||
Sbjct: 80009 atttcatagagtattcgaccttttttaactacagctacccaatattctggagatcctttt 80068

                                 
Query: 703   cccgagcccatacgtgtttc 722
             || || ||||||||||||||
Sbjct: 80069 ccagatcccatacgtgtttc 80088



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 77    cttcaggagctaatgaaactattttggtaaaatt 110
             ||||||||||||| || |||||||| ||||||||
Sbjct: 79421 cttcaggagctaaagatactattttagtaaaatt 79454

to top

>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506A10
          Length = 145265

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 101/124 (81%), Gaps = 8/124 (6%)
 Strand = Plus / Minus

                                                                          
Query: 139    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 198
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 127299 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 127248

                                                                          
Query: 199    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 258
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||| 
Sbjct: 127247 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattact 127188

                  
Query: 259    gctc 262
              ||||
Sbjct: 127187 gctc 127184



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 139    ccaaaaactcgagttccttttgggttgcctttttgat 175
              ||||||||||||||||||||||| || |||| |||||
Sbjct: 126033 ccaaaaactcgagttccttttggatttccttcttgat 125997



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 139    ccaaaaactcgagttccttttgggttgcctttttgat 175
              ||||||||||||||||||||||| || |||| |||||
Sbjct: 121959 ccaaaaactcgagttccttttggatttccttcttgat 121923

to top

>gb|DQ069422.1| Ginkgo biloba ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 108/130 (83%), Gaps = 2/130 (1%)
 Strand = Plus / Minus

                                                                       
Query: 72  taatacttcaggagctaatgaaactattttggtaaaattcaattctctcaattcctcg-g 130
           ||||||||| ||||| |||| ||||||||| || ||||| |||| ||||||||| ||| |
Sbjct: 366 taatacttcgggagccaatggaactatttttgtgaaattaaattgtctcaattc-tcgag 308

                                                                       
Query: 131 caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 190
           |||  |  |||||||||||||||||||| || || ||||  |||||||| | ||| || |
Sbjct: 307 caactgaaccaaaaactcgagttcctttcggatttccttcctgatcaatgacaactgctg 248

                     
Query: 191 cattgtcatc 200
           ||||||||||
Sbjct: 247 cattgtcatc 238

to top

>dbj|AB077440.1| Incarvillea potaninii plastid DNA, intron region
          Length = 536

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| ||||||||||| ||||| || || ||||||||||| |||||||| ||||| ||
Sbjct: 313 tactccacccatttcatatagtattcgccccggtttaacaacagctacccagtattcagg 254

                                         
Query: 693 ggacccctttcccgagcccatacgtgtttc 722
           |   || || ||||| ||||||||||||||
Sbjct: 253 gtttcctttccccgaacccatacgtgtttc 224



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                         
Query: 413 catttaaaagggtctgaggttgaatcatat 442
           |||||||||||| |||||||||||||||||
Sbjct: 528 catttaaaaggg-ctgaggttgaatcatat 500

to top

>dbj|AB077334.1| Zygophyllum pterocarpum plastid DNA, intron region
          Length = 553

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                       
Query: 633 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 692
           |||||| | ||||||||||||||| | ||| |||||||| || |  ||||||||||| ||
Sbjct: 314 tactccactcatttcataaagtatcctaccaggtttaaccacagagacccaatattctgg 255

                                         
Query: 693 ggacccctttcccgagcccatacgtgtttc 722
            || || |||||||| ||||||||||||||
Sbjct: 254 agatccttttcccgaacccatacgtgtttc 225



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                         
Query: 413 catttaaaagggtctgaggttgaatcatat 442
           |||||||||||| |||||||||||||||||
Sbjct: 545 catttaaaaggg-ctgaggttgaatcatat 517

to top

>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome
          Length = 161452

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                 
Query: 370    actcgaatacacatcaattttcgagctccactattgtctgctacatttaaa 420
              |||||||||||||| ||||| ||||| |||||||| || ||||||||||||
Sbjct: 140455 actcgaatacacattaatttgcgagcaccactattatcagctacatttaaa 140505



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 76     acttcaggagctaatgaaactattttggtaaaatt 110
              |||||||||||||| ||||| ||||| ||||||||
Sbjct: 140167 acttcaggagctaaagaaacaatttttgtaaaatt 140201

to top

>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1175_B01
          Length = 96191

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 104   taaaattcaattctctcaattcctcggcaatcgcgccaaaaac 146
             ||||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 20850 taaaattcaatactctcgattcctcggcgatcgcgccaaaaac 20808

to top

>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome
          Length = 151933

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                         
Query: 376   atacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttga 435
             |||||||| |||||||| ||||||||||| ||||| || |||| |   || |||||||||
Sbjct: 16479 atacacattaattttcgtgctccactattatctgcgacgtttacatatgtttgaggttga 16420

                      
Query: 436   atcatatta 444
             |||||||||
Sbjct: 16419 atcatatta 16411

to top

>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome
          Length = 150568

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 373   cgaatacacatcaattttcgagctccactattgtctgctacatttaaa 420
             |||||||||||||| || |||||||| ||||| |||||||||| ||||
Sbjct: 76668 cgaatacacatcaacttgcgagctccgctattatctgctacatctaaa 76715

to top

>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome
          Length = 203828

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 373   cgaatacacatcaattttcgagctccactattgtctgctacatttaaa 420
             ||||||||||| ||||  ||||| |||||||| |||||||||||||||
Sbjct: 28989 cgaatacacattaattcacgagcaccactattatctgctacatttaaa 28942

to top

>emb|X14062.1|CHCRL14 Chlamydomonas reinhardtii plasti gene for ribosomal protein L14
          Length = 988

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 373 cgaatacacatcaattttcgagctccactattgtctgctacatttaaa 420
           ||||||||||| ||||  ||||| |||||||| |||||||||||||||
Sbjct: 588 cgaatacacattaattcacgagcaccactattatctgctacatttaaa 541

to top

>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome
          Length = 144170

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 673   acggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtct 731
             |||| ||||| |||||| | |||||| ||||| || |||||||||||||||| ||||||
Sbjct: 73837 acggatacccgatattccgtggacccttttcctgaacccatacgtgtttccgcgggtct 73895

to top

>gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1) gene, complete cds
          Length = 99431

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                         
Query: 640   cccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggacccc 699
             |||||||||||||||||    || |||||||| || ||||||||||||||||| ||  | 
Sbjct: 75772 cccatttcataaagtattttgccgggtttaacgacagctacccaatattcgggagattct 75831

                                    
Query: 700   tttcccgagcccatacgtgtttc 722
             ||||| || |||||||| |||||
Sbjct: 75832 tttcctgaacccatacgcgtttc 75854

to top

>gb|M30487.1|CPACYRP Cyanophora paradoxa ribosomal protein l22 (rpl22) gene, partial cds;
            ribosomal protein s3 (rps3), ribosomal protein l16
            (rpl16), ribosomal protein l7 (rpl7), ribosomal protein
            l14 (rpl14), ribosomal protein l5 (rpl5), ribosomal
            protein s8 (rps8), ribosomal protein l6 (rpl6), ribosomal
            protein l18 (rpl18), ribosomal protein s5 (rps5), and
            ribosomal protein secY (secY) genes, complete cds; and
            ORF gene, partial cds
          Length = 6468

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 370  actcgaatacacatcaattttcgagctccactatt 404
            |||||||||||||| ||||| ||||||||||||||
Sbjct: 1744 actcgaatacacattaatttacgagctccactatt 1710



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 70   tataatacttcaggagctaatgaaactattttggtaaaatt 110
            ||||||||||| |||||||| ||||  ||||| ||||||||
Sbjct: 2041 tataatacttccggagctaaagaaataatttttgtaaaatt 2001



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 312  tacagcaacaataacatcaccaatacgagcata 344
            |||||| ||||| ||||||||||| ||||||||
Sbjct: 1799 tacagcgacaattacatcaccaattcgagcata 1767

to top

>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 95    ctattttggtaaaattcaattctctcaattc 125
             ||||||| |||||||||||||||||||||||
Sbjct: 45211 ctattttagtaaaattcaattctctcaattc 45181

to top

>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome
          Length = 135599

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 370   actcgaatacacatcaattttcgagctccactatt 404
             |||||||||||||| ||||| ||||||||||||||
Sbjct: 52478 actcgaatacacattaatttacgagctccactatt 52512



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 312   tacagcaacaataacatcaccaatacgagcata 344
             |||||| ||||| ||||||||||| ||||||||
Sbjct: 52423 tacagcgacaattacatcaccaattcgagcata 52455



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 70    tataatacttcaggagctaatgaaactattttggtaaaatt 110
             ||||||||||| |||||||| ||||  ||||| ||||||||
Sbjct: 52181 tataatacttccggagctaaagaaataatttttgtaaaatt 52221

to top

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                           
Query: 661     cctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtt 720
               ||||||||||| || |||||||||||||| || || ||||| || || |||||||| |||
Sbjct: 3265454 cctggtttaactactgctacccaatattctggagaacccttaccagatcccatacgggtt 3265513

                 
Query: 721     tc 722
               ||
Sbjct: 3265514 tc 3265515

to top

>gb|AF050665.1|AF050665 Spirogyra maxima tRNA-Ile gene, complete sequence; and ribosomal
            protein L23 (rpl23), ribosomal protein L2 (rpl2),
            ribosomal protein S19 (rps19), ribosomal protein L22
            (rpl22), ribosomal protein S3 (rps3), ribosomal protein
            L16 (rpl16), ribosomal protein L14 (rpl14), ribosomal
            protein S8 (rps8), initiation factor A (infA), ribosomal
            protein L36 (rpl36), ribosomal protein S11 (rps11), and
            RNA polymerase alpha subunit (rpoA) genes, complete cds,
            chloroplast genes for chloroplast products
          Length = 8794

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 76   acttcaggagctaatgaaactattttggtaaaattcaattctctcaattc 125
            |||||||||||||| || ||||| || |||||||| |||||||| |||||
Sbjct: 5584 acttcaggagctaaagatactatcttagtaaaatttaattctcttaattc 5535



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 661  cctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtt 720
            |||||||| ||||| |||||||||||||| || |  ||||| || || ||||||||||||
Sbjct: 4918 cctggttttacaactgctacccaatattctggagcacccttaccagatcccatacgtgtt 4859

              
Query: 721  tc 722
            ||
Sbjct: 4858 tc 4857



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 373  cgaatacacatcaattttcgagctccact 401
            ||||||||||| ||||| |||||||||||
Sbjct: 5290 cgaatacacattaatttacgagctccact 5262

to top

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 376    atacacatcaattttcgagctccactattgtctgctacatt 416
              |||||||||||||| ||||| || ||||||||||| |||||
Sbjct: 879333 atacacatcaatttacgagcgccgctattgtctgcgacatt 879293

to top

>gb|AC144759.11| Medicago truncatula clone mth2-15b21, complete sequence
          Length = 124666

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 76/93 (81%)
 Strand = Plus / Plus

                                                                         
Query: 641   ccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggacccct 700
             ||||||||||||||||   ||| | |||||  || ||||||||||||||||| || || |
Sbjct: 19092 ccatttcataaagtattttaccggatttaatgacagctacccaatattcgggagatccgt 19151

                                              
Query: 701   ttcccgagcccatacgtgtttccgtgggtctta 733
             ||||| | |||||||  ||||| || |||||||
Sbjct: 19152 ttcccaaacccatacacgtttcagtaggtctta 19184

to top

>gb|AC123596.13| Medicago truncatula clone mth1-17n5, complete sequence
          Length = 120055

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 76/93 (81%)
 Strand = Plus / Plus

                                                                         
Query: 641   ccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggacccct 700
             ||||||||||||||||   ||| | |||||  || ||||||||||||||||| || || |
Sbjct: 16435 ccatttcataaagtattttaccggatttaatgacagctacccaatattcgggagatccgt 16494

                                              
Query: 701   ttcccgagcccatacgtgtttccgtgggtctta 733
             ||||| | |||||||  ||||| || |||||||
Sbjct: 16495 ttcccaaacccatacacgtttcagtaggtctta 16527

to top

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 376     atacacatcaattttcgagctccactattgtctgctacatt 416
               |||||||||||||| ||||| || ||||||||||| |||||
Sbjct: 5047012 atacacatcaatttacgagcgccgctattgtctgcgacatt 5047052

to top

>emb|CT025839.2| Medicago truncatula chromosome 5 clone mth4-19c21, COMPLETE SEQUENCE
          Length = 210117

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 76/93 (81%)
 Strand = Plus / Plus

                                                                         
Query: 641   ccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggacccct 700
             ||||||||||||||||   ||| | |||||  || ||||||||||||||||| || || |
Sbjct: 19098 ccatttcataaagtattttaccggatttaatgacagctacccaatattcgggagatccgt 19157

                                              
Query: 701   ttcccgagcccatacgtgtttccgtgggtctta 733
             ||||| | |||||||  ||||| || |||||||
Sbjct: 19158 ttcccaaacccatacacgtttcagtaggtctta 19190

to top

>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome
          Length = 157089

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 389   ttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcat 440
             |||||||||||||||| || ||||||||||||   |  ||||||||||||||
Sbjct: 94493 ttcgagctccactattatcggctacatttaaataagattgaggttgaatcat 94442

to top

>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0007C02, complete sequence
          Length = 148265

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 320   caataacatcaccaatacgagcatatcgctgattaccagc 359
             ||||||| ||||||||| |||||||||  |||||||||||
Sbjct: 98741 caataacgtcaccaatatgagcatatcagtgattaccagc 98780

to top

>ref|NM_128441.3| Arabidopsis thaliana structural constituent of ribosome AT2G28820
           mRNA, complete cds
          Length = 1156

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 310 attacagcaacaataacatcaccaatacgagcata 344
           ||||| ||||||| ||||||||||||| |||||||
Sbjct: 999 attacggcaacaacaacatcaccaatatgagcata 965



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                       
Query: 598 gctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtata 657
           ||||| || |||||| ||||||||||  |||| || || || |||||||||||||  || 
Sbjct: 857 gctatagaaatagcttctctagctactttttcggaaacaccacccatttcataaatgatt 798

                                      
Query: 658 cgacctggtttaacaacggctacccaa 684
             |||||||||||| || |||||||||
Sbjct: 797 ttacctggtttaaccacagctacccaa 771

to top

>emb|AL359081.10| Human DNA sequence from clone RP11-541F9 on chromosome 1, complete
             sequence
          Length = 109288

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 89    atgaaactattttggtaaaattcaatt 115
             |||||||||||||||||| ||||||||
Sbjct: 91500 atgaaactattttggtaacattcaatt 91474

to top

>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete
             sequence
          Length = 107097

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                         
Query: 598   gctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtata 657
             ||||| || |||||| ||||||||||  |||| || || || |||||||||||||  || 
Sbjct: 38231 gctatagaaatagcttctctagctactttttcggaaacaccacccatttcataaatgatt 38290

                                        
Query: 658   cgacctggtttaacaacggctacccaa 684
               |||||||||||| || |||||||||
Sbjct: 38291 ttacctggtttaaccacagctacccaa 38317



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 310   attacagcaacaataacatcaccaatacgagcata 344
             ||||| ||||||| ||||||||||||| |||||||
Sbjct: 38089 attacggcaacaacaacatcaccaatatgagcata 38123

to top

>gb|AY219111.2| Arabidopsis thaliana hypothetical protein (At2g28820/F8N16.11) mRNA,
            complete cds
          Length = 1179

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 310  attacagcaacaataacatcaccaatacgagcata 344
            ||||| ||||||| ||||||||||||| |||||||
Sbjct: 1002 attacggcaacaacaacatcaccaatatgagcata 968



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                       
Query: 598 gctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtata 657
           ||||| || |||||| ||||||||||  |||| || || || |||||||||||||  || 
Sbjct: 860 gctatagaaatagcttctctagctactttttcggaaacaccacccatttcataaatgatt 801

                                      
Query: 658 cgacctggtttaacaacggctacccaa 684
             |||||||||||| || |||||||||
Sbjct: 800 ttacctggtttaaccacagctacccaa 774

to top

>dbj|AP000606.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MTO24
          Length = 82360

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 439   atattattttgatttcaatttgttatt 465
             |||||||||||||||||| ||||||||
Sbjct: 13778 atattattttgatttcaaattgttatt 13752

to top

>dbj|AB028608.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K20I9
          Length = 43500

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 74    atacttcaggagctaatgaaactattt 100
             |||| ||||||||||||||||||||||
Sbjct: 22874 atacctcaggagctaatgaaactattt 22900

to top

>gb|AC157473.1| Medicago truncatula chromosome 7 BAC clone mte1-11e4, complete sequence
          Length = 125310

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 414   atttaaaagggtctgaggttgaa 436
             |||||||||||||||||||||||
Sbjct: 65424 atttaaaagggtctgaggttgaa 65402

to top

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 85/106 (80%)
 Strand = Plus / Plus

                                                                         
Query: 617   tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 676
             |||||| | |||||| |||||| || |||||||| |||||  | || ||||||||||| |
Sbjct: 17523 tagctatattttcagttactccacctatttcatatagtattagtcccggtttaacaacag 17582

                                                           
Query: 677   ctacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
             ||||  ||||||   |||| || || || || ||||||||||||||
Sbjct: 17583 ctacaaaatatttatgggatcctttccctgaacccatacgtgtttc 17628

to top

>gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosome 10, complete sequence
          Length = 180642

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 475    aaggatgaaagaaatattgtctttcc 500
              |||||||||||||||||| |||||||
Sbjct: 116209 aaggatgaaagaaatattttctttcc 116234

to top

>dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWF20
          Length = 91193

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 441   attattttgatttcaatttgtt 462
             ||||||||||||||||||||||
Sbjct: 90746 attattttgatttcaatttgtt 90725

to top

>gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosome 10, complete sequence
          Length = 217425

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 475    aaggatgaaagaaatattgtctttcc 500
              |||||||||||||||||| |||||||
Sbjct: 184750 aaggatgaaagaaatattttctttcc 184775

to top

>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 154     ccttttgggttgcctttttga 174
               |||||||||||||||||||||
Sbjct: 1617545 ccttttgggttgcctttttga 1617565



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 69     ttataatacttcaggagctaatgaaactatttt 101
              |||||| ||||||||||||| |||||| |||||
Sbjct: 352059 ttataaaacttcaggagctagtgaaacgatttt 352027

to top

>emb|CT009479.4| M.truncatula DNA sequence from clone MTH2-164E3 on chromosome 3,
             complete sequence
          Length = 133351

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 464   tttcaatgcaaaaggatgaaagaaa 488
             ||||||| |||||||||||||||||
Sbjct: 58265 tttcaatacaaaaggatgaaagaaa 58241

to top

>gb|AC132083.3| Mus musculus BAC clone RP24-540G23 from chromosome 5, complete sequence
          Length = 158764

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    acaatctactaatattaattc 41
             |||||||||||||||||||||
Sbjct: 90572 acaatctactaatattaattc 90592

to top

>emb|CR753838.10| Zebrafish DNA sequence from clone DKEY-189H5 in linkage group 5,
             complete sequence
          Length = 188660

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 89    atgaaactattttggtaaaat 109
             |||||||||||||||||||||
Sbjct: 13532 atgaaactattttggtaaaat 13552

to top

>gb|AY115835.1| Pinus krempfii ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1114

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1104 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1060

to top

>gb|AY115834.1| Pinus squamata ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

to top

>gb|AY115833.1| Pinus gerardiana ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1119

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1109 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1065

to top

>gb|AY115832.1| Pinus bungeana ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1119

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1109 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1065

to top

>gb|AY115831.1| Pinus balfouriana specimen-voucher Kew1969.10666 California ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1100 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1056

to top

>gb|AY115830.1| Pinus balfouriana specimen-voucher Olinecm11 California ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1100 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1056

to top

>gb|AY115829.1| Pinus longaeva specimen-voucher Kew1972.6349 California ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1100 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1056

to top

>gb|AY115828.1| Pinus longaeva specimen-voucher DSG3099 California ribosomal protein
            L16 (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1100 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1056

to top

>gb|AY115827.1| Pinus aristata specimen-voucher Kew1992.747 Colorado ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1100 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1056

to top

>gb|AY115826.1| Pinus aristata specimen-voucher DSG3299 Colorado ribosomal protein
            L16 (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1100 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1056

to top

>gb|AY115825.1| Pinus nelsonii ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

to top

>gb|AY115824.1| Pinus rzedowskii ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

to top

>gb|AY115823.1| Pinus pinceana specimen-voucher DSG8899 Coahuila ribosomal protein
            L16 (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

to top

>gb|AY115822.1| Pinus pinceana specimen-voucher DSG3998 Hidalgo ribosomal protein L16
            (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

to top

>gb|AY115821.1| Pinus maximartinezii ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

to top

>gb|AY115820.1| Pinus quadrifolia ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

to top

>gb|AY115819.1| Pinus juarezensis specimen-voucher DSG1099 Baja California Norte
            ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

to top

>gb|AY115818.1| Pinus juarezensis specimen-voucher DSG1499 Baja California Norte
            ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

to top

>gb|AY115817.1| Pinus monophylla specimen-voucher DSG2399 California ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

to top

>gb|AY115816.1| Pinus monophylla specimen-voucher Kew1986.5767 California ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

to top

>gb|AY115815.1| Pinus discolor ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

to top

>gb|AY115814.1| Pinus johannis specimen-voucher DSG2001 San Luis Potosi ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

to top

>gb|AY115813.1| Pinus johannis specimen-voucher DSG8199 Zacatecas ribosomal protein
            L16 (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1112

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1102 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1058

to top

>gb|AY115812.1| Pinus catarinae specimen-voucher DSG1301 Nuevo Leon ribosomal protein
            L16 (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 678  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 722
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,266,042
Number of Sequences: 3902068
Number of extensions: 7266042
Number of successful extensions: 148750
Number of sequences better than 10.0: 279
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 145432
Number of HSP's gapped (non-prelim): 3156
length of query: 734
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 711
effective length of database: 17,143,297,704
effective search space: 12188884667544
effective search space used: 12188884667544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result