>COX20_ASHGO (Q75D23) Cytochrome c oxidase protein 20, mitochondrial precursor|
          Length = 194

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 26/86 (30%), Positives = 38/86 (44%)
 Frame = -1

Query: 403 SEQLEGHETHEQVAILADLSRNMDQRMSYLSTEIRRLRSDLGEAMQGIREIREALARMER 224
           +E L  + T  Q  +L D     D + S     ++R R+ L +A + +R    +L RM  
Sbjct: 30  AEPLPTNYTPGQRLLLEDTRPRFDTQSSASQQAVQRERATLADAWKTVRWEDFSLERMAG 89

Query: 223 QNPCFRS*RNATSPGVSAAGSYVFAF 146
             PCFR    A    +  AGS  F F
Sbjct: 90  I-PCFRDAGMAGFSAMVVAGSVTFLF 114

>SC61A_YEAST (P32915) Protein transport protein SEC61 alpha subunit|
          Length = 480

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -1

Query: 640 LPSNSYLDLGGPYGKFVPFIIAGEGGFGEHKQLNWTNLFLL 518
           + SN  LDL  P+  F+P +IA E     +++L WT + LL
Sbjct: 1   MSSNRVLDLFKPFESFLPEVIAPERKVPYNQKLIWTGVSLL 41

>NEST_HUMAN (P48681) Nestin|
          Length = 1618

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = -1

Query: 343 RNMDQRMSYLSTEIRRLRSDLGEAMQGIREIREALARMERQ 221
           R   +R++++ T + + R  L  A+QG RE+R  L +++ +
Sbjct: 190 RGYQERVAHMETSLDQTRERLARAVQGAREVRLELQQLQAE 230

>PMT7_YEAST (Q06644) Dolichyl-phosphate-mannose--protein mannosyltransferase 7|
           (EC 2.4.1.109)
          Length = 662

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 622 LDLGGPYGKFVPFIIAGEGGFGEHKQLNWTNLFLL 518
           L L GPY K++P+ I  + G G  K L++   FL+
Sbjct: 4   LRLQGPYRKYIPYNIFQQCGIGHLKTLDYIFAFLI 38


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,962,510
Number of Sequences: 219361
Number of extensions: 1898440
Number of successful extensions: 4725
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4724
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7252940416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)