ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags39m12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472623.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1824 Score = 432 bits (218), Expect = e-118 Identities = 308/338 (91%) Strand = Plus / Minus Query: 373 tcgtcttcccctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccac 432 ||||||||||| ||||| ||| | || |||||||||||||||||||||||||||||||| Sbjct: 1715 tcgtcttccccaccgaagccgtactcgttgacacgcttcttgtcaactgggtacacccat 1656 Query: 433 ctctggtagaggtatatcaagaagataacatcatctctgaaaaccgagagacgatgcaac 492 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 1655 ctctggtagaggtatatcaagaagataacatcatctctgaaaactgagagacgatgcagc 1596 Query: 493 catggcatcttaatcacaaatgcaaacagatcatcaattatagtgttaaggaacttgtag 552 ||||| || ||||||||||| || || ||||||||||| ||||| |||||||||||| Sbjct: 1595 atcggcattttgatcacaaatgcgaaaaggtcatcaattatggtgttgaggaacttgtag 1536 Query: 553 gtcatttgtctccatggcatatgagcaacggacttcagcttgtagttgataaataattgt 612 |||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 1535 gtcatttgcctccatggcatatgagcaacagacttcagcttgtagttgatgaatagttgt 1476 Query: 613 gggcacatcataataaaaccaaacatgtaaacacaacttgtgagggaagagagtatccac 672 ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1475 gggcacatcatgatgaaaccaaacatgtacacacaacttgtgagagaagagagtatccat 1416 Query: 673 gagtaccagctcttgtgtttttcatacttgagtgaata 710 |||||||||||||||||||| |||||||| || ||||| Sbjct: 1415 gagtaccagctcttgtgtttctcatacttaagggaata 1378 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 279 tcactttgtcttcttgtcctctgtgctcgtctcagcct 316 |||||| |||||||||||||| ||||||||||| |||| Sbjct: 1824 tcacttcgtcttcttgtcctccgtgctcgtctcggcct 1787
>dbj|AK070853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064G12, full insert sequence Length = 2271 Score = 432 bits (218), Expect = e-118 Identities = 308/338 (91%) Strand = Plus / Minus Query: 373 tcgtcttcccctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccac 432 ||||||||||| ||||| ||| | || |||||||||||||||||||||||||||||||| Sbjct: 1792 tcgtcttccccaccgaagccgtactcgttgacacgcttcttgtcaactgggtacacccat 1733 Query: 433 ctctggtagaggtatatcaagaagataacatcatctctgaaaaccgagagacgatgcaac 492 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 1732 ctctggtagaggtatatcaagaagataacatcatctctgaaaactgagagacgatgcagc 1673 Query: 493 catggcatcttaatcacaaatgcaaacagatcatcaattatagtgttaaggaacttgtag 552 ||||| || ||||||||||| || || ||||||||||| ||||| |||||||||||| Sbjct: 1672 atcggcattttgatcacaaatgcgaaaaggtcatcaattatggtgttgaggaacttgtag 1613 Query: 553 gtcatttgtctccatggcatatgagcaacggacttcagcttgtagttgataaataattgt 612 |||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 1612 gtcatttgcctccatggcatatgagcaacagacttcagcttgtagttgatgaatagttgt 1553 Query: 613 gggcacatcataataaaaccaaacatgtaaacacaacttgtgagggaagagagtatccac 672 ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1552 gggcacatcatgatgaaaccaaacatgtacacacaacttgtgagagaagagagtatccat 1493 Query: 673 gagtaccagctcttgtgtttttcatacttgagtgaata 710 |||||||||||||||||||| |||||||| || ||||| Sbjct: 1492 gagtaccagctcttgtgtttctcatacttaagggaata 1455 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 276 ggctcactttgtcttcttgtcctctgtgctcgtctcagcct 316 ||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 1904 ggctcacttcgtcttcttgtcctccgtgctcgtctcggcct 1864
>dbj|AK067882.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122N14, full insert sequence Length = 2236 Score = 432 bits (218), Expect = e-118 Identities = 308/338 (91%) Strand = Plus / Minus Query: 373 tcgtcttcccctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccac 432 ||||||||||| ||||| ||| | || |||||||||||||||||||||||||||||||| Sbjct: 1750 tcgtcttccccaccgaagccgtactcgttgacacgcttcttgtcaactgggtacacccat 1691 Query: 433 ctctggtagaggtatatcaagaagataacatcatctctgaaaaccgagagacgatgcaac 492 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 1690 ctctggtagaggtatatcaagaagataacatcatctctgaaaactgagagacgatgcagc 1631 Query: 493 catggcatcttaatcacaaatgcaaacagatcatcaattatagtgttaaggaacttgtag 552 ||||| || ||||||||||| || || ||||||||||| ||||| |||||||||||| Sbjct: 1630 atcggcattttgatcacaaatgcgaaaaggtcatcaattatggtgttgaggaacttgtag 1571 Query: 553 gtcatttgtctccatggcatatgagcaacggacttcagcttgtagttgataaataattgt 612 |||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 1570 gtcatttgcctccatggcatatgagcaacagacttcagcttgtagttgatgaatagttgt 1511 Query: 613 gggcacatcataataaaaccaaacatgtaaacacaacttgtgagggaagagagtatccac 672 ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1510 gggcacatcatgatgaaaccaaacatgtacacacaacttgtgagagaagagagtatccat 1451 Query: 673 gagtaccagctcttgtgtttttcatacttgagtgaata 710 |||||||||||||||||||| |||||||| || ||||| Sbjct: 1450 gagtaccagctcttgtgtttctcatacttaagggaata 1413 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 276 ggctcactttgtcttcttgtcctctgtgctcgtctcagcct 316 ||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 1862 ggctcacttcgtcttcttgtcctccgtgctcgtctcggcct 1822
>dbj|AK059457.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C05, full insert sequence Length = 1431 Score = 432 bits (218), Expect = e-118 Identities = 308/338 (91%) Strand = Plus / Minus Query: 373 tcgtcttcccctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccac 432 ||||||||||| ||||| ||| | || |||||||||||||||||||||||||||||||| Sbjct: 1093 tcgtcttccccaccgaagccgtactcgttgacacgcttcttgtcaactgggtacacccat 1034 Query: 433 ctctggtagaggtatatcaagaagataacatcatctctgaaaaccgagagacgatgcaac 492 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 1033 ctctggtagaggtatatcaagaagataacatcatctctgaaaactgagagacgatgcagc 974 Query: 493 catggcatcttaatcacaaatgcaaacagatcatcaattatagtgttaaggaacttgtag 552 ||||| || ||||||||||| || || ||||||||||| ||||| |||||||||||| Sbjct: 973 atcggcattttgatcacaaatgcgaaaaggtcatcaattatggtgttgaggaacttgtag 914 Query: 553 gtcatttgtctccatggcatatgagcaacggacttcagcttgtagttgataaataattgt 612 |||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 913 gtcatttgcctccatggcatatgagcaacagacttcagcttgtagttgatgaatagttgt 854 Query: 613 gggcacatcataataaaaccaaacatgtaaacacaacttgtgagggaagagagtatccac 672 ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 853 gggcacatcatgatgaaaccaaacatgtacacacaacttgtgagagaagagagtatccat 794 Query: 673 gagtaccagctcttgtgtttttcatacttgagtgaata 710 |||||||||||||||||||| |||||||| || ||||| Sbjct: 793 gagtaccagctcttgtgtttctcatacttaagggaata 756 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 276 ggctcactttgtcttcttgtcctctgtgctcgtctcagcct 316 ||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 1205 ggctcacttcgtcttcttgtcctccgtgctcgtctcggcct 1165
>gb|BT017104.1| Zea mays clone EL01N0362F05.c mRNA sequence Length = 1338 Score = 391 bits (197), Expect = e-105 Identities = 296/329 (89%) Strand = Plus / Minus Query: 382 cctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccacctctggtag 441 |||||||| || || || ||||||||||||||||| || || || ||||||||||||| Sbjct: 897 cctccgaagccaaactcgttgacacgcttcttgtcgaccggatatttccacctctggtag 838 Query: 442 aggtatatcaagaagataacatcatctctgaaaaccgagagacgatgcaaccatggcatc 501 | ||||||||||||||||||||||||||||||||||||||||||||| | | |||||| Sbjct: 837 acgtatatcaagaagataacatcatctctgaaaaccgagagacgatgaagcattggcatt 778 Query: 502 ttaatcacaaatgcaaacagatcatcaattatagtgttaaggaacttgtaggtcatttgt 561 ||||| || |||||||| || ||||||||||||||||| ||||||||||||||||||||| Sbjct: 777 ttaatgacgaatgcaaaaaggtcatcaattatagtgttgaggaacttgtaggtcatttgt 718 Query: 562 ctccatggcatatgagcaacggacttcagcttgtagttgataaataattgtgggcacatc 621 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 717 ctccatggcatatgagcaacagacttcagcttgtagttgataaataattgggggcacatc 658 Query: 622 ataataaaaccaaacatgtaaacacaacttgtgagggaagagagtatccacgagtaccag 681 || || |||||||||||||| ||||||||||| | ||||| |||||||| ||||||||| Sbjct: 657 atgatgaaaccaaacatgtacacacaacttgtcatagaagaaagtatccatgagtaccag 598 Query: 682 ctcttgtgtttttcatacttgagtgaata 710 |||||||| ||||||||||| |||||||| Sbjct: 597 ctcttgtgcttttcatactttagtgaata 569
>gb|AY107946.1| Zea mays PCO086250 mRNA sequence Length = 1671 Score = 379 bits (191), Expect = e-102 Identities = 308/347 (88%) Strand = Plus / Minus Query: 364 gctgccggttcgtcttcccctccgaaaccgaattcattgacacgcttcttgtcaactggg 423 |||||||||||||| || || ||||| || || || || |||||||||||||| || || Sbjct: 1238 gctgccggttcgtcctcgcccccgaagccaaactcgttaacacgcttcttgtcgaccgga 1179 Query: 424 tacacccacctctggtagaggtatatcaagaagataacatcatctctgaaaaccgagaga 483 ||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1178 tacttccacctctgatagaggtatatcaagaagataacatcatctctgaaaactgagaga 1119 Query: 484 cgatgcaaccatggcatcttaatcacaaatgcaaacagatcatcaattatagtgttaagg 543 ||||| | | |||||| || || ||||||||||| || ||||| ||||||||||| ||| Sbjct: 1118 cgatgaagcattggcattttgatgacaaatgcaaaaaggtcatcgattatagtgttgagg 1059 Query: 544 aacttgtaggtcatttgtctccatggcatatgagcaacggacttcagcttgtagttgata 603 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1058 aacttgtaggtcatttgtctccatggcatatgagcaacagacttcagcttgtagttgata 999 Query: 604 aataattgtgggcacatcataataaaaccaaacatgtaaacacaacttgtgagggaagag 663 || ||||| |||||||||||||| |||||||||||||| ||||| ||||| | ||||| Sbjct: 998 aacaattgggggcacatcataatgaaaccaaacatgtacacacagcttgtcatagaagaa 939 Query: 664 agtatccacgagtaccagctcttgtgtttttcatacttgagtgaata 710 |||||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 938 agtatccatgagtaccagctcttgtgcttttcatacttaagtgaata 892
>gb|AY110534.1| Zea mays CL3534_2 mRNA sequence Length = 709 Score = 345 bits (174), Expect = 1e-91 Identities = 291/332 (87%) Strand = Plus / Plus Query: 364 gctgccggttcgtcttcccctccgaaaccgaattcattgacacgcttcttgtcaactggg 423 ||||| ||||| || || |||||||| || || || ||||||||||||||||| || || Sbjct: 338 gctgcgggttcctcctcgcctccgaagccaaactcgttgacacgcttcttgtcgaccgga 397 Query: 424 tacacccacctctggtagaggtatatcaagaagataacatcatctctgaaaaccgagaga 483 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 398 tatttccacctctggtagacgtatatcaagaagataacatcatctctgaaaaccgagaga 457 Query: 484 cgatgcaaccatggcatcttaatcacaaatgcaaacagatcatcaattatagtgttaagg 543 ||||| | | |||||| ||||| || |||||| | || ||||||||||||||||| ||| Sbjct: 458 cgatgaagcattggcattttaatgacgaatgcanaaaggtcatcaattatagtgttgagg 517 Query: 544 aacttgtaggtcatttgtctccatggcatatgagcaacggacttcagcttgtagttgata 603 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 518 aacttgtaggtcatttgtctccatggcatatgagcaacagacttcagcttgtagttgata 577 Query: 604 aataattgtgggcacatcataataaaaccaaacatgtaaacacaacttgtgagggaagag 663 ||||||| |||||||| || |||||||||||||| ||||||||||| | ||||| Sbjct: 578 aataattnnnnncacatcatgatgaaaccaaacatgtacacacaacttgtcatagaagaa 637 Query: 664 agtatccacgagtaccagctcttgtgtttttc 695 |||||||| ||||||||||||||||| ||||| Sbjct: 638 agtatccatgagtaccagctcttgtgcttttc 669
>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete sequence Length = 121130 Score = 192 bits (97), Expect = 1e-45 Identities = 151/169 (89%) Strand = Plus / Plus Query: 464 catctctgaaaaccgagagacgatgcaaccatggcatcttaatcacaaatgcaaacagat 523 ||||||||||||| ||||||||||||| | ||||| || ||||||||||| || || | Sbjct: 64429 catctctgaaaactgagagacgatgcagcatcggcattttgatcacaaatgcgaaaaggt 64488 Query: 524 catcaattatagtgttaaggaacttgtaggtcatttgtctccatggcatatgagcaacgg 583 |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| | Sbjct: 64489 catcaattatggtgttgaggaacttgtaggtcatttgcctccatggcatatgagcaacag 64548 Query: 584 acttcagcttgtagttgataaataattgtgggcacatcataataaaacc 632 ||||||||||||||||||| |||| ||||||||||||||| || ||||| Sbjct: 64549 acttcagcttgtagttgatgaatagttgtgggcacatcatgatgaaacc 64597 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 373 tcgtcttcccctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccac 432 ||||||||||| ||||| ||| | || |||||||||||||||||||||||||||||||| Sbjct: 64245 tcgtcttccccaccgaagccgtactcgttgacacgcttcttgtcaactgggtacacccat 64304 Query: 433 ctctggtagaggtatatcaagaagataacatc 464 |||||||||||||||||||||||||||||||| Sbjct: 64305 ctctggtagaggtatatcaagaagataacatc 64336 Score = 113 bits (57), Expect = 8e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 630 accaaacatgtaaacacaacttgtgagggaagagagtatccacgagtaccagctcttgtg 689 |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 64678 accaaacatgtacacacaacttgtgagagaagagagtatccatgagtaccagctcttgtg 64737 Query: 690 tttttcatacttgagtgaata 710 ||| |||||||| || ||||| Sbjct: 64738 tttctcatacttaagggaata 64758 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 276 ggctcactttgtcttcttgtcctctgtgctcgtctcagcct 316 ||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 64133 ggctcacttcgtcttcttgtcctccgtgctcgtctcggcct 64173
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 192 bits (97), Expect = 1e-45 Identities = 151/169 (89%) Strand = Plus / Plus Query: 464 catctctgaaaaccgagagacgatgcaaccatggcatcttaatcacaaatgcaaacagat 523 ||||||||||||| ||||||||||||| | ||||| || ||||||||||| || || | Sbjct: 21998507 catctctgaaaactgagagacgatgcagcatcggcattttgatcacaaatgcgaaaaggt 21998566 Query: 524 catcaattatagtgttaaggaacttgtaggtcatttgtctccatggcatatgagcaacgg 583 |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| | Sbjct: 21998567 catcaattatggtgttgaggaacttgtaggtcatttgcctccatggcatatgagcaacag 21998626 Query: 584 acttcagcttgtagttgataaataattgtgggcacatcataataaaacc 632 ||||||||||||||||||| |||| ||||||||||||||| || ||||| Sbjct: 21998627 acttcagcttgtagttgatgaatagttgtgggcacatcatgatgaaacc 21998675 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 373 tcgtcttcccctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccac 432 ||||||||||| ||||| ||| | || |||||||||||||||||||||||||||||||| Sbjct: 21998323 tcgtcttccccaccgaagccgtactcgttgacacgcttcttgtcaactgggtacacccat 21998382 Query: 433 ctctggtagaggtatatcaagaagataacatc 464 |||||||||||||||||||||||||||||||| Sbjct: 21998383 ctctggtagaggtatatcaagaagataacatc 21998414 Score = 113 bits (57), Expect = 8e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 630 accaaacatgtaaacacaacttgtgagggaagagagtatccacgagtaccagctcttgtg 689 |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 21998756 accaaacatgtacacacaacttgtgagagaagagagtatccatgagtaccagctcttgtg 21998815 Query: 690 tttttcatacttgagtgaata 710 ||| |||||||| || ||||| Sbjct: 21998816 tttctcatacttaagggaata 21998836 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 276 ggctcactttgtcttcttgtcctctgtgctcgtctcagcct 316 ||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 21998211 ggctcacttcgtcttcttgtcctccgtgctcgtctcggcct 21998251
>emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20, complete sequence Length = 99855 Score = 192 bits (97), Expect = 1e-45 Identities = 151/169 (89%) Strand = Plus / Plus Query: 464 catctctgaaaaccgagagacgatgcaaccatggcatcttaatcacaaatgcaaacagat 523 ||||||||||||| ||||||||||||| | ||||| || ||||||||||| || || | Sbjct: 71078 catctctgaaaactgagagacgatgcagcatcggcattttgatcacaaatgcgaaaaggt 71137 Query: 524 catcaattatagtgttaaggaacttgtaggtcatttgtctccatggcatatgagcaacgg 583 |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| | Sbjct: 71138 catcaattatggtgttgaggaacttgtaggtcatttgcctccatggcatatgagcaacag 71197 Query: 584 acttcagcttgtagttgataaataattgtgggcacatcataataaaacc 632 ||||||||||||||||||| |||| ||||||||||||||| || ||||| Sbjct: 71198 acttcagcttgtagttgatgaatagttgtgggcacatcatgatgaaacc 71246 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 373 tcgtcttcccctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccac 432 ||||||||||| ||||| ||| | || |||||||||||||||||||||||||||||||| Sbjct: 70894 tcgtcttccccaccgaagccgtactcgttgacacgcttcttgtcaactgggtacacccat 70953 Query: 433 ctctggtagaggtatatcaagaagataacatc 464 |||||||||||||||||||||||||||||||| Sbjct: 70954 ctctggtagaggtatatcaagaagataacatc 70985 Score = 113 bits (57), Expect = 8e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 630 accaaacatgtaaacacaacttgtgagggaagagagtatccacgagtaccagctcttgtg 689 |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 71327 accaaacatgtacacacaacttgtgagagaagagagtatccatgagtaccagctcttgtg 71386 Query: 690 tttttcatacttgagtgaata 710 ||| |||||||| || ||||| Sbjct: 71387 tttctcatacttaagggaata 71407 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 276 ggctcactttgtcttcttgtcctctgtgctcgtctcagcct 316 ||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 70782 ggctcacttcgtcttcttgtcctccgtgctcgtctcggcct 70822
>ref|NM_147908.2| Arabidopsis thaliana unknown protein AT5G23575 mRNA, complete cds Length = 2203 Score = 159 bits (80), Expect = 2e-35 Identities = 251/308 (81%) Strand = Plus / Minus Query: 382 cctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccacctctggtag 441 ||||| |||||||| || || ||||| |||| || |||||||| |||||||| ||||| Sbjct: 1968 cctccaaaaccgaactcgttcacacgtgtcttatccactgggtaaacccacctttggtat 1909 Query: 442 aggtatatcaagaagataacatcatctctgaaaaccgagagacgatgcaaccatggcatc 501 | |||||||||||| || |||||||||||||| || || || ||||| || ||||| Sbjct: 1908 aagtatatcaagaatatcacatcatctctgaatacagaaagtcgatgtaaaatcggcatt 1849 Query: 502 ttaatcacaaatgcaaacagatcatcaattatagtgttaaggaacttgtaggtcatttgt 561 || || ||||| ||||| ||||| || || || ||||| ||||||||||| ||||| ||| Sbjct: 1848 ttgatgacaaaggcaaagagatcgtcgataatggtgttgaggaacttgtaagtcatctgt 1789 Query: 562 ctccatggcatatgagcaacggacttcagcttgtagttgataaataattgtgggcacatc 621 |||||||| | ||| || || || || |||||||||||||| |||| || || |||||| Sbjct: 1788 ctccatggtaaatgtgccactgatttaagcttgtagttgatgaatagctgaggacacatc 1729 Query: 622 ataataaaaccaaacatgtaaacacaacttgtgagggaagagagtatccacgagtaccag 681 || || ||||| |||||||| ||||| ||||| || ||||| |||||||| || |||||| Sbjct: 1728 atgatgaaaccgaacatgtagacacagcttgttagtgaagatagtatccaagaataccag 1669 Query: 682 ctcttgtg 689 |||||||| Sbjct: 1668 ctcttgtg 1661
>gb|AY143924.1| Arabidopsis thaliana At5g08500/MAH20_6 mRNA, complete cds Length = 1782 Score = 159 bits (80), Expect = 2e-35 Identities = 251/308 (81%) Strand = Plus / Minus Query: 382 cctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccacctctggtag 441 ||||| |||||||| || || ||||| |||| || |||||||| |||||||| ||||| Sbjct: 1715 cctccaaaaccgaactcgttcacacgtgtcttatccactgggtaaacccacctttggtat 1656 Query: 442 aggtatatcaagaagataacatcatctctgaaaaccgagagacgatgcaaccatggcatc 501 | |||||||||||| || |||||||||||||| || || || ||||| || ||||| Sbjct: 1655 aagtatatcaagaatatcacatcatctctgaatacagaaagtcgatgtaaaatcggcatt 1596 Query: 502 ttaatcacaaatgcaaacagatcatcaattatagtgttaaggaacttgtaggtcatttgt 561 || || ||||| ||||| ||||| || || || ||||| ||||||||||| ||||| ||| Sbjct: 1595 ttgatgacaaaggcaaagagatcgtcgataatggtgttgaggaacttgtaagtcatctgt 1536 Query: 562 ctccatggcatatgagcaacggacttcagcttgtagttgataaataattgtgggcacatc 621 |||||||| | ||| || || || || |||||||||||||| |||| || || |||||| Sbjct: 1535 ctccatggtaaatgtgccactgatttaagcttgtagttgatgaatagctgaggacacatc 1476 Query: 622 ataataaaaccaaacatgtaaacacaacttgtgagggaagagagtatccacgagtaccag 681 || || ||||| |||||||| ||||| ||||| || ||||| |||||||| || |||||| Sbjct: 1475 atgatgaaaccgaacatgtagacacagcttgttagtgaagatagtatccaagaataccag 1416 Query: 682 ctcttgtg 689 |||||||| Sbjct: 1415 ctcttgtg 1408
>gb|AY064127.1| Arabidopsis thaliana AT5g08500/MAH20_6 mRNA, complete cds Length = 2063 Score = 159 bits (80), Expect = 2e-35 Identities = 251/308 (81%) Strand = Plus / Minus Query: 382 cctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccacctctggtag 441 ||||| |||||||| || || ||||| |||| || |||||||| |||||||| ||||| Sbjct: 1875 cctccaaaaccgaactcgttcacacgtgtcttatccactgggtaaacccacctttggtat 1816 Query: 442 aggtatatcaagaagataacatcatctctgaaaaccgagagacgatgcaaccatggcatc 501 | |||||||||||| || |||||||||||||| || || || ||||| || ||||| Sbjct: 1815 aagtatatcaagaatatcacatcatctctgaatacagaaagtcgatgtaaaatcggcatt 1756 Query: 502 ttaatcacaaatgcaaacagatcatcaattatagtgttaaggaacttgtaggtcatttgt 561 || || ||||| ||||| ||||| || || || ||||| ||||||||||| ||||| ||| Sbjct: 1755 ttgatgacaaaggcaaagagatcgtcgataatggtgttgaggaacttgtaagtcatctgt 1696 Query: 562 ctccatggcatatgagcaacggacttcagcttgtagttgataaataattgtgggcacatc 621 |||||||| | ||| || || || || |||||||||||||| |||| || || |||||| Sbjct: 1695 ctccatggtaaatgtgccactgatttaagcttgtagttgatgaatagctgaggacacatc 1636 Query: 622 ataataaaaccaaacatgtaaacacaacttgtgagggaagagagtatccacgagtaccag 681 || || ||||| |||||||| ||||| ||||| || ||||| |||||||| || |||||| Sbjct: 1635 atgatgaaaccgaacatgtagacacagcttgttagtgaagatagtatccaagaataccag 1576 Query: 682 ctcttgtg 689 |||||||| Sbjct: 1575 ctcttgtg 1568
>dbj|AK222196.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL24-24-F12 Length = 1462 Score = 159 bits (80), Expect = 2e-35 Identities = 251/308 (81%) Strand = Plus / Minus Query: 382 cctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccacctctggtag 441 ||||| |||||||| || || ||||| |||| || |||||||| |||||||| ||||| Sbjct: 1243 cctccaaaaccgaactcgttcacacgtgtcttatccactgggtaaacccacctttggtat 1184 Query: 442 aggtatatcaagaagataacatcatctctgaaaaccgagagacgatgcaaccatggcatc 501 | |||||||||||| || |||||||||||||| || || || ||||| || ||||| Sbjct: 1183 aagtatatcaagaatatcacatcatctctgaatacagaaagtcgatgtaaaatcggcatt 1124 Query: 502 ttaatcacaaatgcaaacagatcatcaattatagtgttaaggaacttgtaggtcatttgt 561 || || ||||| ||||| ||||| || || || ||||| ||||||||||| ||||| ||| Sbjct: 1123 ttgatgacaaaggcaaagagatcgtcgataatggtgttgaggaacttgtaagtcatctgt 1064 Query: 562 ctccatggcatatgagcaacggacttcagcttgtagttgataaataattgtgggcacatc 621 |||||||| | ||| || || || || |||||||||||||| |||| || || |||||| Sbjct: 1063 ctccatggtaaatgtgccactgatttaagcttgtagttgatgaatagctgaggacacatc 1004 Query: 622 ataataaaaccaaacatgtaaacacaacttgtgagggaagagagtatccacgagtaccag 681 || || ||||| |||||||| ||||| ||||| || ||||| |||||||| || |||||| Sbjct: 1003 atgatgaaaccgaacatgtagacacagcttgttagtgaagatagtatccaagaataccag 944 Query: 682 ctcttgtg 689 |||||||| Sbjct: 943 ctcttgtg 936
>ref|NM_120935.2| Arabidopsis thaliana unknown protein AT5G08500 mRNA, complete cds Length = 1998 Score = 151 bits (76), Expect = 4e-33 Identities = 250/308 (81%) Strand = Plus / Minus Query: 382 cctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccacctctggtag 441 ||||| ||||| || || |||||||| | ||||| || || || ||||| |||||||| Sbjct: 1753 cctccaaaaccaaactcgttgacacgtgttttgtccacaggataaacccatctctggtac 1694 Query: 442 aggtatatcaagaagataacatcatctctgaaaaccgagagacgatgcaaccatggcatc 501 | |||||| ||||| || |||||||||| ||| || || || ||||||||| |||||| Sbjct: 1693 aagtatattaagaatatcacatcatctcggaagacagaaaggcgatgcaacattggcatt 1634 Query: 502 ttaatcacaaatgcaaacagatcatcaattatagtgttaaggaacttgtaggtcatttgt 561 || || ||||| ||||| ||||| || || || ||||| |||||||| || |||||||| Sbjct: 1633 ttgatgacaaaagcaaagagatcgtcgatgattgtgttgaggaacttatatgtcatttgc 1574 Query: 562 ctccatggcatatgagcaacggacttcagcttgtagttgataaataattgtgggcacatc 621 |||||||| | ||| || || ||||||||||| |||||||| || ||||| || |||||| Sbjct: 1573 ctccatggtaaatgtgctactgacttcagcttatagttgatgaacaattgaggacacatc 1514 Query: 622 ataataaaaccaaacatgtaaacacaacttgtgagggaagagagtatccacgagtaccag 681 || || |||||||||||||| || || || || || ||||| || ||||| ||||||||| Sbjct: 1513 attatgaaaccaaacatgtagacgcagctcgttagtgaagataggatccatgagtaccag 1454 Query: 682 ctcttgtg 689 |||||||| Sbjct: 1453 ctcttgtg 1446
>gb|AY099856.1| Arabidopsis thaliana cleft lip and palate associated transmembrane protein-like (At5g08500) mRNA, complete cds Length = 1998 Score = 151 bits (76), Expect = 4e-33 Identities = 250/308 (81%) Strand = Plus / Minus Query: 382 cctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccacctctggtag 441 ||||| ||||| || || |||||||| | ||||| || || || ||||| |||||||| Sbjct: 1753 cctccaaaaccaaactcgttgacacgtgttttgtccacaggataaacccatctctggtac 1694 Query: 442 aggtatatcaagaagataacatcatctctgaaaaccgagagacgatgcaaccatggcatc 501 | |||||| ||||| || |||||||||| ||| || || || ||||||||| |||||| Sbjct: 1693 aagtatattaagaatatcacatcatctcggaagacagaaaggcgatgcaacattggcatt 1634 Query: 502 ttaatcacaaatgcaaacagatcatcaattatagtgttaaggaacttgtaggtcatttgt 561 || || ||||| ||||| ||||| || || || ||||| |||||||| || |||||||| Sbjct: 1633 ttgatgacaaaagcaaagagatcgtcgatgattgtgttgaggaacttatatgtcatttgc 1574 Query: 562 ctccatggcatatgagcaacggacttcagcttgtagttgataaataattgtgggcacatc 621 |||||||| | ||| || || ||||||||||| |||||||| || ||||| || |||||| Sbjct: 1573 ctccatggtaaatgtgctactgacttcagcttatagttgatgaacaattgaggacacatc 1514 Query: 622 ataataaaaccaaacatgtaaacacaacttgtgagggaagagagtatccacgagtaccag 681 || || |||||||||||||| || || || || || ||||| || ||||| ||||||||| Sbjct: 1513 attatgaaaccaaacatgtagacgcagctcgttagtgaagataggatccatgagtaccag 1454 Query: 682 ctcttgtg 689 |||||||| Sbjct: 1453 ctcttgtg 1446
>emb|BX832360.1|CNS0A1X4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZH12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 421 Score = 95.6 bits (48), Expect = 2e-16 Identities = 153/188 (81%) Strand = Plus / Minus Query: 382 cctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccacctctggtag 441 ||||| |||||||| || || ||||| |||| || |||||||| |||||||| ||||| Sbjct: 199 cctccaaaaccgaactcgttcacacgtgtcttatccactgggtaaacccacctttggtat 140 Query: 442 aggtatatcaagaagataacatcatctctgaaaaccgagagacgatgcaaccatggcatc 501 | |||||||||||| || |||||||||||||| || || || ||||| || ||||| Sbjct: 139 aagtatatcaagaatatcacatcatctctgaatacagaaagtcgatgtaaaatcggcatt 80 Query: 502 ttaatcacaaatgcaaacagatcatcaattatagtgttaaggaacttgtaggtcatttgt 561 || || ||||| ||||| ||||| || || || ||||| ||||||||||| ||||| ||| Sbjct: 79 ttgatgacaaaggcaaagagatcgtcgataatggtgttgaggaacttgtaagtcatctgt 20 Query: 562 ctccatgg 569 |||||||| Sbjct: 19 ctccatgg 12
>emb|AL392174.1|ATF8L15 Arabidopsis thaliana DNA chromosome 5, BAC clone F8L15 (ESSA project) Length = 125411 Score = 81.8 bits (41), Expect = 3e-12 Identities = 122/149 (81%) Strand = Plus / Minus Query: 484 cgatgcaaccatggcatcttaatcacaaatgcaaacagatcatcaattatagtgttaagg 543 ||||||||| |||||| || || ||||| ||||| ||||| || || || ||||| ||| Sbjct: 115137 cgatgcaacattggcattttgatgacaaaagcaaagagatcgtcgatgattgtgttgagg 115078 Query: 544 aacttgtaggtcatttgtctccatggcatatgagcaacggacttcagcttgtagttgata 603 ||||| || |||||||| |||||||| | ||| || || ||||||||||| |||||||| Sbjct: 115077 aacttatatgtcatttgcctccatggtaaatgtgctactgacttcagcttatagttgatg 115018 Query: 604 aataattgtgggcacatcataataaaacc 632 || ||||| || |||||||| || ||||| Sbjct: 115017 aacaattgaggacacatcattatgaaacc 114989 Score = 48.1 bits (24), Expect = 0.040 Identities = 51/60 (85%) Strand = Plus / Minus Query: 630 accaaacatgtaaacacaacttgtgagggaagagagtatccacgagtaccagctcttgtg 689 |||||||||||| || || || || || ||||| || ||||| ||||||||||||||||| Sbjct: 114898 accaaacatgtagacgcagctcgttagtgaagataggatccatgagtaccagctcttgtg 114839
>dbj|AB006697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAH20 Length = 80970 Score = 81.8 bits (41), Expect = 3e-12 Identities = 122/149 (81%) Strand = Plus / Minus Query: 484 cgatgcaaccatggcatcttaatcacaaatgcaaacagatcatcaattatagtgttaagg 543 ||||||||| |||||| || || ||||| ||||| ||||| || || || ||||| ||| Sbjct: 18842 cgatgcaacattggcattttgatgacaaaagcaaagagatcgtcgatgattgtgttgagg 18783 Query: 544 aacttgtaggtcatttgtctccatggcatatgagcaacggacttcagcttgtagttgata 603 ||||| || |||||||| |||||||| | ||| || || ||||||||||| |||||||| Sbjct: 18782 aacttatatgtcatttgcctccatggtaaatgtgctactgacttcagcttatagttgatg 18723 Query: 604 aataattgtgggcacatcataataaaacc 632 || ||||| || |||||||| || ||||| Sbjct: 18722 aacaattgaggacacatcattatgaaacc 18694 Score = 48.1 bits (24), Expect = 0.040 Identities = 51/60 (85%) Strand = Plus / Minus Query: 630 accaaacatgtaaacacaacttgtgagggaagagagtatccacgagtaccagctcttgtg 689 |||||||||||| || || || || || ||||| || ||||| ||||||||||||||||| Sbjct: 18603 accaaacatgtagacgcagctcgttagtgaagataggatccatgagtaccagctcttgtg 18544
>emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-28A3 on chromosome 3, complete sequence Length = 114882 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 630 accaaacatgtaaacacaacttgtgagggaagagagtatccacgagtaccagctcttgtg 689 |||||||||||| |||||||||||||||||||| || ||||| || |||||||||||||| Sbjct: 284 accaaacatgtatacacaacttgtgagggaagacagaatccaagaataccagctcttgtg 343
>gb|U20626.1|ATU20626 Arabidopsis thaliana calcium-dependent protein kinase (CDPK9) gene, complete cds Length = 4420 Score = 65.9 bits (33), Expect = 2e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 508 acaaatgcaaacagatcatcaattatagtgttaaggaacttgtaggtcatttgtctccat 567 ||||| ||||| ||||| || || || ||||| ||||||||||| ||||| ||||||||| Sbjct: 3828 acaaaggcaaagagatcgtcgataatggtgttgaggaacttgtaagtcatctgtctccat 3887 Query: 568 ggcatatgagcaacggacttcagcttgtagttgataaataattgtgggcacatcataata 627 || | ||| || || || || |||||||||||||| |||| || || |||||||| || Sbjct: 3888 ggtaaatgtgccactgatttaagcttgtagttgatgaatagctgaggacacatcatgatg 3947 Query: 628 aaacc 632 ||||| Sbjct: 3948 aaacc 3952 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 634 aacatgtaaacacaacttgtgagggaagagagtatccacgagtaccagctcttgtg 689 |||||||| ||||| ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 4037 aacatgtagacacagcttgttagtgaagatagtatccaagaataccagctcttgtg 4092 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 382 cctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccacctctggtag 441 ||||| |||||||| || || ||||| |||| || |||||||| |||||||| ||||| Sbjct: 3614 cctccaaaaccgaactcgttcacacgtgtcttatccactgggtaaacccacctttggtat 3673 Query: 442 aggtatatcaagaagataacatc 464 | |||||||||||| || ||||| Sbjct: 3674 aagtatatcaagaatatcacatc 3696
>dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQM1 Length = 81365 Score = 65.9 bits (33), Expect = 2e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 508 acaaatgcaaacagatcatcaattatagtgttaaggaacttgtaggtcatttgtctccat 567 ||||| ||||| ||||| || || || ||||| ||||||||||| ||||| ||||||||| Sbjct: 28811 acaaaggcaaagagatcgtcgataatggtgttgaggaacttgtaagtcatctgtctccat 28752 Query: 568 ggcatatgagcaacggacttcagcttgtagttgataaataattgtgggcacatcataata 627 || | ||| || || || || |||||||||||||| |||| || || |||||||| || Sbjct: 28751 ggtaaatgtgccactgatttaagcttgtagttgatgaatagctgaggacacatcatgatg 28692 Query: 628 aaacc 632 ||||| Sbjct: 28691 aaacc 28687 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 634 aacatgtaaacacaacttgtgagggaagagagtatccacgagtaccagctcttgtg 689 |||||||| ||||| ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 28602 aacatgtagacacagcttgttagtgaagatagtatccaagaataccagctcttgtg 28547 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 382 cctccgaaaccgaattcattgacacgcttcttgtcaactgggtacacccacctctggtag 441 ||||| |||||||| || || ||||| |||| || |||||||| |||||||| ||||| Sbjct: 29025 cctccaaaaccgaactcgttcacacgtgtcttatccactgggtaaacccacctttggtat 28966 Query: 442 aggtatatcaagaagataacatc 464 | |||||||||||| || ||||| Sbjct: 28965 aagtatatcaagaatatcacatc 28943
>gb|AC096709.19| Homo sapiens chromosome 18, clone RP11-707P24, complete sequence Length = 199285 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 71 gcatagaaaaacaaacccaaacaaa 95 ||||||||||||||||||||||||| Sbjct: 17441 gcatagaaaaacaaacccaaacaaa 17465
>gb|AC092710.6| Mus musculus chromosome 13, clone RP23-5A19, complete sequence Length = 268129 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 79 aaacaaacccaaacaaataaacagtaa 105 |||||||| |||||||||||||||||| Sbjct: 101041 aaacaaacacaaacaaataaacagtaa 101067
>ref|XM_321629.2| Anopheles gambiae str. PEST ENSANGP00000011520 (ENSANGG00000009031), partial mRNA Length = 1677 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 668 tccacgagtaccagctcttgtg 689 |||||||||||||||||||||| Sbjct: 1327 tccacgagtaccagctcttgtg 1306 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 ttcagcttgtagttgataaa 605 |||||||||||||||||||| Sbjct: 1409 ttcagcttgtagttgataaa 1390
>emb|CT009706.20| Mouse DNA sequence from clone RP23-131H17 on chromosome 9, complete sequence Length = 215322 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 aacaaacccaaacaaataaaca 101 |||||||||||||||||||||| Sbjct: 33764 aacaaacccaaacaaataaaca 33743
>gb|AC171406.3| Mus musculus BAC RP24-475O6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 192548 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||||||||| ||||||||||||| Sbjct: 126555 aaaaacaaaccaaaacaaataaaca 126579
>gb|AC154528.2| Mus musculus BAC clone RP23-460I18 from chromosome 14, complete sequence Length = 207430 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||||||||||||||||| ||||| Sbjct: 45941 aaaaacaaacccaaacaaacaaaca 45965
>gb|AC161751.3| Mus musculus BAC clone RP24-525E22 from chromosome y, complete sequence Length = 188482 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||||||||||||||||| ||||| Sbjct: 116418 aaaaacaaacccaaacaaacaaaca 116394
>gb|AC163622.4| Mus musculus BAC clone RP24-566G6 from chromosome y, complete sequence Length = 166756 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||||||||||||||||| ||||| Sbjct: 7938 aaaaacaaacccaaacaaacaaaca 7914
>gb|AC140278.2| Mus musculus BAC clone RP24-313J18 from chromosome 17, complete sequence Length = 180727 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||||||||| ||||||||||||| Sbjct: 156579 aaaaacaaaccgaaacaaataaaca 156555
>gb|AC120855.9| Mus musculus chromosome 18, clone RP23-270P23, complete sequence Length = 226294 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 528 aattatagtgttaaggaacttgtag 552 ||||| ||||||||||||||||||| Sbjct: 86072 aattaaagtgttaaggaacttgtag 86048
>gb|AC139245.4| Mus musculus BAC clone RP23-309N16 from chromosome 8, complete sequence Length = 202789 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 cccaaacaaataaacagtaat 106 ||||||||||||||||||||| Sbjct: 44589 cccaaacaaataaacagtaat 44609
>emb|CT009661.10| Mouse DNA sequence from clone CH29-621D18 on chromosome 17, complete sequence Length = 224982 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||||||||| ||||||||||||| Sbjct: 209650 aaaaacaaaccgaaacaaataaaca 209674
>gb|AC127566.3| Mus musculus BAC clone RP24-187F3 from chromosome 5, complete sequence Length = 176559 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 aaaacaaacccaaacaaataaacag 102 |||||||| |||||||||||||||| Sbjct: 106820 aaaacaaaaccaaacaaataaacag 106796
>gb|AC132452.3| Mus musculus BAC clone RP23-195K10 from chromosome 19, complete sequence Length = 218688 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||||||||||||||||| ||||| Sbjct: 78343 aaaaacaaacccaaacaaacaaaca 78367
>gb|AC109605.14| Mus musculus strain 129S6/SvEvTac clone rp22-470o15 map 11, complete sequence Length = 170397 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 aaaaacaaacccaaacaaataaaca 101 |||| |||||||||||||||||||| Sbjct: 31508 aaaaccaaacccaaacaaataaaca 31484
>emb|AL592504.6| Human DNA sequence from clone RP11-320J16 on chromosome X Contains part of a novel gene, complete sequence Length = 173828 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 tagaaaaacaaacccaaacaa 94 ||||||||||||||||||||| Sbjct: 7951 tagaaaaacaaacccaaacaa 7931
>emb|AL121947.14|HSDJ383P5 Human DNA sequence from clone RP3-383P5 on chromosome 6q22.33-23.3 Contains the 3' end of a novel gene, the 5' end of the gene for KIAA1913 protein and a CpG island, complete sequence Length = 138997 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaacaaacccaaacaaataaa 99 ||||||||||||||||||||| Sbjct: 71539 aaacaaacccaaacaaataaa 71519
>gb|AC161432.5| Mus musculus chromosome 1, clone RP23-453N14, complete sequence Length = 199303 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||| ||||||||||||||||||| Sbjct: 152813 aaaaaaaaacccaaacaaataaaca 152789
>ref|XM_777872.1| PREDICTED: Strongylocentrotus purpuratus similar to budding uninhibited by benzimidazoles 1 homolog, beta (LOC577657), mRNA Length = 1047 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 gttgggctgccgctgctcctt 349 ||||||||||||||||||||| Sbjct: 855 gttgggctgccgctgctcctt 835
>emb|AL662810.16| Mouse DNA sequence from clone RP23-42P24 on chromosome 11 Contains a novel gene (9630006B20Rik), a novel gene, a ribosomal protein S12 (Rps12) pseudogene, a novel gene (LOC268391), the Bcl11a gene for B-cell CLL/lymphoma 11A (zinc finger protein), two novel genes and three CpG islands, complete sequence Length = 267641 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 ctgttacatccttctttcttt 167 ||||||||||||||||||||| Sbjct: 150777 ctgttacatccttctttcttt 150797
>gb|AC154097.13| Mus musculus chromosome 18, clone RP23-337F6, complete sequence Length = 216640 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 528 aattatagtgttaaggaacttgtag 552 ||||| ||||||||||||||||||| Sbjct: 5850 aattaaagtgttaaggaacttgtag 5874
>gb|AC069308.21| Mus musculus Strain C57BL6/J Chromosome 8 RP23-21B7, complete sequence Length = 239821 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 cccaaacaaataaacagtaat 106 ||||||||||||||||||||| Sbjct: 234611 cccaaacaaataaacagtaat 234631
>ref|NM_134975.2| Drosophila melanogaster CG3702-RA (CG3702), mRNA Length = 2369 Score = 42.1 bits (21), Expect = 2.5 Identities = 60/73 (82%) Strand = Plus / Minus Query: 535 gtgttaaggaacttgtaggtcatttgtctccatggcatatgagcaacggacttcagcttg 594 ||||| ||||||||||||||||| | ||| ||||| || || || ||||| |||||| Sbjct: 1861 gtgttgaggaacttgtaggtcatcatgcgccacggcatgtgggccaccgactttagcttg 1802 Query: 595 tagttgataaata 607 |||||||| |||| Sbjct: 1801 tagttgatgaata 1789
>gb|AC023772.22| Homo sapiens chromosome 4, clone RP11-634F16, complete sequence Length = 191312 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||| ||||||||||||||||||| Sbjct: 24059 aaaaaaaaacccaaacaaataaaca 24035
>dbj|AK156119.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830008H18 product:LYRIC homolog [Mus musculus], full insert sequence Length = 4558 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 aaaacaaacccaaacaaataaacag 102 |||||||||||||||| |||||||| Sbjct: 2017 aaaacaaacccaaacagataaacag 1993
>dbj|AK161321.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930404K14 product:hypothetical protein, full insert sequence Length = 2500 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 aaaacaaacccaaacaaataaacag 102 |||||||||||||||| |||||||| Sbjct: 2042 aaaacaaacccaaacagataaacag 2018
>dbj|AK162405.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330160D07 product:unclassifiable, full insert sequence Length = 2589 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 aaaacaaacccaaacaaataaacag 102 |||||||||||||||| |||||||| Sbjct: 38 aaaacaaacccaaacagataaacag 14
>emb|BX322620.13| Zebrafish DNA sequence from clone DKEY-49L3 in linkage group 13, complete sequence Length = 192504 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 gaaaaacaaacccaaacaaataaac 100 ||||||||||||||||||| ||||| Sbjct: 125935 gaaaaacaaacccaaacaactaaac 125911
>gb|AY052040.1| Drosophila melanogaster LP05054 full length cDNA Length = 2359 Score = 42.1 bits (21), Expect = 2.5 Identities = 60/73 (82%) Strand = Plus / Minus Query: 535 gtgttaaggaacttgtaggtcatttgtctccatggcatatgagcaacggacttcagcttg 594 ||||| ||||||||||||||||| | ||| ||||| || || || ||||| |||||| Sbjct: 1833 gtgttgaggaacttgtaggtcatcatgcgccacggcatgtgggccaccgactttagcttg 1774 Query: 595 tagttgataaata 607 |||||||| |||| Sbjct: 1773 tagttgatgaata 1761
>gb|AC092217.1|AC092217 Drosophila melanogaster, chromosome 2L, region 24D-24E, BAC clone BACR11D14, complete sequence Length = 158347 Score = 42.1 bits (21), Expect = 2.5 Identities = 60/73 (82%) Strand = Plus / Minus Query: 535 gtgttaaggaacttgtaggtcatttgtctccatggcatatgagcaacggacttcagcttg 594 ||||| ||||||||||||||||| | ||| ||||| || || || ||||| |||||| Sbjct: 57727 gtgttgaggaacttgtaggtcatcatgcgccacggcatgtgggccaccgactttagcttg 57668 Query: 595 tagttgataaata 607 |||||||| |||| Sbjct: 57667 tagttgatgaata 57655
>dbj|AK087486.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130305A01 product:LYRIC homolog, full insert sequence Length = 2486 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 aaaacaaacccaaacaaataaacag 102 |||||||||||||||| |||||||| Sbjct: 2033 aaaacaaacccaaacagataaacag 2009
>gb|AC136590.2| Homo sapiens chromosome 5 clone CTD-2312G21, complete sequence Length = 301479 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 gaaaaacaaacccaaacaaat 96 ||||||||||||||||||||| Sbjct: 107802 gaaaaacaaacccaaacaaat 107822
>gb|AC137551.1| Homo sapiens chromosome 5 clone RP11-867C24, complete sequence Length = 183535 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 gaaaaacaaacccaaacaaat 96 ||||||||||||||||||||| Sbjct: 44595 gaaaaacaaacccaaacaaat 44575
>emb|BX465847.15| Mouse DNA sequence from clone RP23-102L14 on chromosome X, complete sequence Length = 206399 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||||||||||||||||| ||||| Sbjct: 116654 aaaaacaaacccaaacaaacaaaca 116630
>dbj|BS000016.1| Pan troglodytes chromosome 22 clone:PTB-066F21, map 22, complete sequences Length = 148564 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 ttaatcacaaatgcaaacaga 522 ||||||||||||||||||||| Sbjct: 17894 ttaatcacaaatgcaaacaga 17914
>gb|AF222685.1|AF222685 Homo sapiens chromosome 21 PAC 103K19 map 21q11.2, complete sequence Length = 85040 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 ttaatcacaaatgcaaacaga 522 ||||||||||||||||||||| Sbjct: 67868 ttaatcacaaatgcaaacaga 67888
>emb|AL163208.2|HS21C008 Homo sapiens chromosome 21 segment HS21C008 Length = 340000 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 ttaatcacaaatgcaaacaga 522 ||||||||||||||||||||| Sbjct: 226065 ttaatcacaaatgcaaacaga 226085
>gb|AF130248.1|AF130248 Homo sapiens clone 10J13 chromosome 21 map 21q11.2, complete sequence Length = 137074 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 ttaatcacaaatgcaaacaga 522 ||||||||||||||||||||| Sbjct: 12284 ttaatcacaaatgcaaacaga 12304
>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete sequence Length = 290034 Score = 42.1 bits (21), Expect = 2.5 Identities = 60/73 (82%) Strand = Plus / Plus Query: 535 gtgttaaggaacttgtaggtcatttgtctccatggcatatgagcaacggacttcagcttg 594 ||||| ||||||||||||||||| | ||| ||||| || || || ||||| |||||| Sbjct: 193880 gtgttgaggaacttgtaggtcatcatgcgccacggcatgtgggccaccgactttagcttg 193939 Query: 595 tagttgataaata 607 |||||||| |||| Sbjct: 193940 tagttgatgaata 193952
>gb|AC174647.2| Mus musculus BAC clone RP23-25C24 from chromosome 14, complete sequence Length = 238300 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||||||||||||||||| ||||| Sbjct: 36662 aaaaacaaacccaaacaaacaaaca 36638
>gb|AC153484.4| Mus musculus 10 BAC RP23-388B8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 166648 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||||||||| ||||||||||||| Sbjct: 64136 aaaaacaaaccaaaacaaataaaca 64160
>gb|AC004380.1|AC004380 Drosophila melanogaster DNA sequence (P1 DS06843 (D96)), complete sequence Length = 51065 Score = 42.1 bits (21), Expect = 2.5 Identities = 60/73 (82%) Strand = Plus / Plus Query: 535 gtgttaaggaacttgtaggtcatttgtctccatggcatatgagcaacggacttcagcttg 594 ||||| ||||||||||||||||| | ||| ||||| || || || ||||| |||||| Sbjct: 18021 gtgttgaggaacttgtaggtcatcatgcgccacggcatgtgggccaccgactttagcttg 18080 Query: 595 tagttgataaata 607 |||||||| |||| Sbjct: 18081 tagttgatgaata 18093
>gb|AC149588.4| Mus musculus BAC clone RP23-366I10 from 15, complete sequence Length = 200656 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 aaaacaaacccaaacaaataaacag 102 |||||||||||||||| |||||||| Sbjct: 123501 aaaacaaacccaaacagataaacag 123477
>gb|AC170998.2| Mus musculus BAC clone RP24-137E7 from chromosome 17, complete sequence Length = 148715 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||||||||| ||||||||||||| Sbjct: 9246 aaaaacaaaccgaaacaaataaaca 9222
>emb|AL512361.3|CNS07EFA Human chromosome 14 DNA sequence BAC R-326E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 158305 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 atcaagaagataacatcatct 468 ||||||||||||||||||||| Sbjct: 90414 atcaagaagataacatcatct 90394
>gb|AC104620.5| Homo sapiens BAC clone RP11-294O2 from 4, complete sequence Length = 155643 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 aaaaacaaacccaaacaaataaaca 101 ||||| ||||||||||||||||||| Sbjct: 57888 aaaaaaaaacccaaacaaataaaca 57864
>gb|AC152947.1| Mus musculus 10 BAC RP23-12H20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222139 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 617 acatcataataaaaccaaac 636 |||||||||||||||||||| Sbjct: 81159 acatcataataaaaccaaac 81178
>ref|XM_639130.1| Dictyostelium discoideum hypothetical protein (DDB0167609), partial mRNA Length = 765 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gaaaaacaaacccaaacaaataaa 99 |||||||||| ||||||||||||| Sbjct: 3 gaaaaacaaaaccaaacaaataaa 26
>gb|AC102535.17| Mus musculus chromosome 7, clone RP23-61O11, complete sequence Length = 220003 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 aaacccaaacaaataaacagtaat 106 ||||||||||||||||||| |||| Sbjct: 176679 aaacccaaacaaataaacaataat 176656
>gb|AC157547.5| Mus musculus chromosome 8, clone RP24-229E19, complete sequence Length = 162954 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cagtgctggctagatgcatg 269 |||||||||||||||||||| Sbjct: 253 cagtgctggctagatgcatg 234
>gb|AC093366.9| Mus musculus chromosome 8, clone RP23-60P23, complete sequence Length = 230236 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 aaaaacaaacccaaacaaataaac 100 |||||||||| ||||||||||||| Sbjct: 179596 aaaaacaaacacaaacaaataaac 179573
>gb|AC149538.2| Xenopus tropicalis clone ISB-392F6, complete sequence Length = 91417 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctcagccttggcctcgatc 327 |||||||||||||||||||| Sbjct: 88882 tctcagccttggcctcgatc 88901
>gb|AC147174.2| Xenopus tropicalis clone CH216-51H8, complete sequence Length = 191184 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 gatgcaaccatggcatcttaatca 508 |||||||| ||||||||||||||| Sbjct: 190268 gatgcaactatggcatcttaatca 190245
>gb|AC148454.2| Xenopus tropicalis clone CH216-161F9, complete sequence Length = 186914 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 gatgcaaccatggcatcttaatca 508 |||||||| ||||||||||||||| Sbjct: 185234 gatgcaactatggcatcttaatca 185211
>gb|AC007889.9| Drosophila melanogaster clone BACR48E12, complete sequence Length = 182182 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 atagaaaaacaaacccaaac 92 |||||||||||||||||||| Sbjct: 24471 atagaaaaacaaacccaaac 24490
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 gacgatgcaaccatggcatc 501 |||||||||||||||||||| Sbjct: 759576 gacgatgcaaccatggcatc 759557
>gb|AC140364.4| Mus musculus BAC clone RP24-75K5 from chromosome 5, complete sequence Length = 234652 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 aaaacaaacccaaacaaataaaca 101 |||||||||||||||||| ||||| Sbjct: 137531 aaaacaaacccaaacaaacaaaca 137554
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 68 taagcatagaaaaacaaacccaaacaaa 95 |||||||||||||||||| | ||||||| Sbjct: 53607 taagcatagaaaaacaaaacaaaacaaa 53634
>gb|AC129288.3| Mus musculus BAC clone RP24-481M4 from chromosome 1, complete sequence Length = 179082 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 caaacccaaacaaataaaca 101 |||||||||||||||||||| Sbjct: 154232 caaacccaaacaaataaaca 154213
>gb|AY601851.1| Homo sapiens mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) (MSH2) gene, complete cds Length = 83678 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 tagttgataaataattgtgg 614 |||||||||||||||||||| Sbjct: 78299 tagttgataaataattgtgg 78318
>gb|AC163013.2| Mus musculus chromosome 8, clone RP24-362N13, complete sequence Length = 115582 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 gtctccatggcatatgagca 579 |||||||||||||||||||| Sbjct: 55580 gtctccatggcatatgagca 55599
>gb|AC125274.12| Mus musculus chromosome 15, clone RP24-157F9, complete sequence Length = 188060 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ataaacagtaatggcaacaa 114 |||||||||||||||||||| Sbjct: 117833 ataaacagtaatggcaacaa 117814
>ref|XM_742573.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g04110) partial mRNA Length = 1917 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 568 ggcatatgagcaacggacttcagcttgtagttgata 603 |||||||||||||| |||||||| |||||||||| Sbjct: 1613 ggcatatgagcaacagacttcagacggtagttgata 1578
>gb|AC146043.2| Pan troglodytes BAC clone RP43-109E16 from 7, complete sequence Length = 154413 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cagccagtgctggctagatg 265 |||||||||||||||||||| Sbjct: 26333 cagccagtgctggctagatg 26314
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 68 taagcatagaaaaacaaacccaaacaaa 95 |||||||||||||||||| | ||||||| Sbjct: 27291 taagcatagaaaaacaaaacaaaacaaa 27264
>gb|AC129014.4| Mus musculus BAC clone RP24-317F20 from chromosome 19, complete sequence Length = 175855 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 aaaacaaacccaaacaaataaaca 101 |||| ||||||||||||||||||| Sbjct: 80653 aaaaaaaacccaaacaaataaaca 80676
>gb|AC122511.5| Mus musculus BAC clone RP24-446A8 from chromosome 6, complete sequence Length = 157847 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 tacatccttctttcttttaa 170 |||||||||||||||||||| Sbjct: 78925 tacatccttctttcttttaa 78944
>ref|XM_799788.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503745.20) partial mRNA Length = 1767 Score = 40.1 bits (20), Expect = 9.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 484 cgatgcaaccatggcatcttaatcacaaatgcaaacagatcatc 527 ||||||| |||||||||||| | | ||||||||| |||||||| Sbjct: 1511 cgatgcagccatggcatcttcacaataaatgcaaaaagatcatc 1468
>ref|XM_803555.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506193.20) partial mRNA Length = 1767 Score = 40.1 bits (20), Expect = 9.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 484 cgatgcaaccatggcatcttaatcacaaatgcaaacagatcatc 527 ||||||| |||||||||||| | | ||||||||| |||||||| Sbjct: 1511 cgatgcagccatggcatcttcacaataaatgcaaaaagatcatc 1468
>gb|AC009600.20| Homo sapiens 2 BAC RP11-436K12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 217304 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 tagttgataaataattgtgg 614 |||||||||||||||||||| Sbjct: 83007 tagttgataaataattgtgg 83026
>gb|AC131788.3| Mus musculus BAC clone RP24-440E10 from chromosome 7, complete sequence Length = 155587 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 gcaaacagatcatcaattat 533 |||||||||||||||||||| Sbjct: 117410 gcaaacagatcatcaattat 117429
>gb|AC125225.4| Mus musculus BAC clone RP23-36I17 from 6, complete sequence Length = 215406 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 aaaacaaacccaaacaaataaaca 101 |||||||||| ||||||||||||| Sbjct: 64413 aaaacaaaccaaaacaaataaaca 64436
>gb|AC121801.2| Mus musculus BAC clone RP23-432P18 from 14, complete sequence Length = 194612 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 aaacccaaacaaataaacag 102 |||||||||||||||||||| Sbjct: 66377 aaacccaaacaaataaacag 66358
>gb|AC007032.2| Homo sapiens BAC clone RP11-22N19 from 7, complete sequence Length = 126803 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 586 ttcagcttgtagttgataaataat 609 |||||||||||||| ||||||||| Sbjct: 29746 ttcagcttgtagtttataaataat 29723
>gb|AC105447.4| Homo sapiens BAC clone RP11-624B14 from 7, complete sequence Length = 34009 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 gaaaaacaaacccaaacaaataaa 99 ||||||||||| |||||||||||| Sbjct: 10700 gaaaaacaaacacaaacaaataaa 10677
>gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome 10, complete sequence Length = 231668 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 aaaacaaacccaaacaaataaaca 101 |||||||||||||||||| ||||| Sbjct: 121916 aaaacaaacccaaacaaacaaaca 121893
>gb|AC107204.4| Homo sapiens 3p BAC RP11-655A17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170799 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 agataacatcatctctgaaa 474 |||||||||||||||||||| Sbjct: 32867 agataacatcatctctgaaa 32886
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aacaaacccaaacaaataaa 99 |||||||||||||||||||| Sbjct: 1841237 aacaaacccaaacaaataaa 1841256
>emb|AL713960.17| Mouse DNA sequence from clone RP23-448I9 on chromosome 11 Contains the 5' end of the Car10 gene for carbonic anhydrase 10 and one CpG island, complete sequence Length = 203449 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 gtatatcaagaagataacat 463 |||||||||||||||||||| Sbjct: 181820 gtatatcaagaagataacat 181839
>gb|AC123298.4| Rattus norvegicus BAC CH230-352N4 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 175621 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 cactttgtcttcttgtcctc 299 |||||||||||||||||||| Sbjct: 58534 cactttgtcttcttgtcctc 58515
>gb|AC108709.3| Homo sapiens 3 BAC RP11-81P15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179223 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 agataacatcatctctgaaa 474 |||||||||||||||||||| Sbjct: 88019 agataacatcatctctgaaa 88038
>gb|AC015994.13| Homo sapiens, clone RP11-328A22, complete sequence Length = 163186 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 aaaacaaacccaaacaaataaaca 101 |||||||| ||||||||||||||| Sbjct: 159143 aaaacaaaaccaaacaaataaaca 159120
>gb|AC087487.14| Homo sapiens chromosome 15, clone RP11-698F12, complete sequence Length = 180232 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 aaaacaaacccaaacaaataaaca 101 |||||||| ||||||||||||||| Sbjct: 107648 aaaacaaaaccaaacaaataaaca 107671
>gb|AC100770.2| Homo sapiens chromosome 11, clone RP11-46P12, complete sequence Length = 165585 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 aaccaaacatgtaaacacaa 648 |||||||||||||||||||| Sbjct: 130572 aaccaaacatgtaaacacaa 130591
>gb|AC025289.6| Homo sapiens chromosome 16 clone RP11-533D19, complete sequence Length = 185047 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gcaaacagatcatcaattat 533 |||||||||||||||||||| Sbjct: 13798 gcaaacagatcatcaattat 13779
>dbj|AK140306.1| Mus musculus adult male adrenal gland cDNA, RIKEN full-length enriched library, clone:B330012N08 product:hypothetical protein, full insert sequence Length = 4279 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 aaaacaaacccaaacaaataaaca 101 |||||||||||||||||| ||||| Sbjct: 4241 aaaacaaacccaaacaaacaaaca 4264
>gb|AC090592.5| Homo sapiens chromosome 11, clone RP11-405K6, complete sequence Length = 168469 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 aaccaaacatgtaaacacaa 648 |||||||||||||||||||| Sbjct: 90116 aaccaaacatgtaaacacaa 90135
>gb|AY568153.1| Melopsittacus undulatus clone EE0322F microsatellite sequence Length = 527 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 agaaaaacaaacccaaacaa 94 |||||||||||||||||||| Sbjct: 160 agaaaaacaaacccaaacaa 179
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 509 caaatgcaaacagatcatcaatta 532 ||||||||||| |||||||||||| Sbjct: 652105 caaatgcaaactgatcatcaatta 652082
>emb|BX511023.8| Zebrafish DNA sequence from clone DKEY-148A12 in linkage group 2, complete sequence Length = 244788 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 actttgtcttcttgtcctct 300 |||||||||||||||||||| Sbjct: 170066 actttgtcttcttgtcctct 170085
>emb|BX572079.7| Zebrafish DNA sequence from clone DKEY-35L8 in linkage group 15, complete sequence Length = 192849 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 agaaaaacaaacccaaacaa 94 |||||||||||||||||||| Sbjct: 138313 agaaaaacaaacccaaacaa 138332
>gb|AC157544.7| Mus musculus chromosome 8, clone RP23-271P20, complete sequence Length = 159843 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cagtgctggctagatgcatg 269 |||||||||||||||||||| Sbjct: 148075 cagtgctggctagatgcatg 148056
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 68 taagcatagaaaaacaaacccaaacaaa 95 |||||||||||||||||| | ||||||| Sbjct: 23985118 taagcatagaaaaacaaaacaaaacaaa 23985145
>gb|AC008307.7|AC008307 Drosophila melanogaster, chromosome 3R, region 86F-87A, BAC clone BACR03D22, complete sequence Length = 157189 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 atagaaaaacaaacccaaac 92 |||||||||||||||||||| Sbjct: 155558 atagaaaaacaaacccaaac 155577
>gb|AC007725.5|AC007725 Drosophila melanogaster, chromosome 3R, region 87A-87A, BAC clone BACR03N24, complete sequence Length = 144152 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 atagaaaaacaaacccaaac 92 |||||||||||||||||||| Sbjct: 105277 atagaaaaacaaacccaaac 105296
>gb|AC093910.2| Homo sapiens BAC clone RP11-762H11 from 2, complete sequence Length = 166731 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 aaaaacaaacccaaacaaataaac 100 ||||| |||||||||||||||||| Sbjct: 126661 aaaaaaaaacccaaacaaataaac 126638
>gb|AC102555.11| Mus musculus chromosome 8, clone RP23-163N19, complete sequence Length = 196060 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 gtctccatggcatatgagca 579 |||||||||||||||||||| Sbjct: 187679 gtctccatggcatatgagca 187698
>gb|AC093526.5| Homo sapiens chromosome 16 clone RP11-213K2, complete sequence Length = 178734 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 gcaaacagatcatcaattat 533 |||||||||||||||||||| Sbjct: 26590 gcaaacagatcatcaattat 26609
>gb|AC092326.4| Homo sapiens chromosome 16 clone RP11-14N9, complete sequence Length = 133615 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gcaaacagatcatcaattat 533 |||||||||||||||||||| Sbjct: 84960 gcaaacagatcatcaattat 84941
>gb|AC026472.8| Homo sapiens chromosome 16 clone RP11-511J24, complete sequence Length = 185047 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gcaaacagatcatcaattat 533 |||||||||||||||||||| Sbjct: 13798 gcaaacagatcatcaattat 13779
>gb|AC151730.5| Mus musculus BAC clone RP24-84E18 from chromosome 19, complete sequence Length = 222459 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 aaaacaaacccaaacaaataaaca 101 |||| ||||||||||||||||||| Sbjct: 24682 aaaaaaaacccaaacaaataaaca 24705
>gb|AC138811.3| Homo sapiens chromosome 16 clone RP11-1035H13, complete sequence Length = 194779 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gcaaacagatcatcaattat 533 |||||||||||||||||||| Sbjct: 57300 gcaaacagatcatcaattat 57281
>gb|AC126456.3| Homo sapiens BAC clone RP11-304P11 from 2, complete sequence Length = 117907 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 aaaaacaaacccaaacaaataaac 100 ||||| |||||||||||||||||| Sbjct: 60665 aaaaaaaaacccaaacaaataaac 60642
>gb|AC019116.7| Homo sapiens BAC clone RP11-506M2 from 2, complete sequence Length = 134249 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ttacatccttctttctttta 169 |||||||||||||||||||| Sbjct: 81009 ttacatccttctttctttta 81028
>gb|AC010373.7| Homo sapiens chromosome 16 clone CTD-2053O6, complete sequence Length = 171860 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gcaaacagatcatcaattat 533 |||||||||||||||||||| Sbjct: 87064 gcaaacagatcatcaattat 87045
>gb|AC138655.1| Homo sapiens BAC clone RP11-436K12 from 2, complete sequence Length = 139150 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 tagttgataaataattgtgg 614 |||||||||||||||||||| Sbjct: 4854 tagttgataaataattgtgg 4873
>gb|AC126760.4| Homo sapiens chromosome 16 clone RP11-1307B12, complete sequence Length = 211419 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gcaaacagatcatcaattat 533 |||||||||||||||||||| Sbjct: 34226 gcaaacagatcatcaattat 34207
>gb|AC132096.4| Mus musculus BAC clone RP24-392H7 from chromosome 7, complete sequence Length = 114183 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 aaacccaaacaaataaacagtaat 106 ||||||||||||||||||| |||| Sbjct: 75451 aaacccaaacaaataaacaataat 75474
>dbj|AK105230.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-F03, full insert sequence Length = 672 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 68 taagcatagaaaaacaaacccaaacaaa 95 |||||||||||||||||| | ||||||| Sbjct: 601 taagcatagaaaaacaaaacaaaacaaa 574
>gb|AC004893.1|AC004893 Homo sapiens PAC clone RP4-808A1 from 7q21.1-q31.1, complete sequence Length = 103738 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 aaaaacaaacccaaacaaataaac 100 ||||| |||||||||||||||||| Sbjct: 88154 aaaaaaaaacccaaacaaataaac 88177
>ref|NM_208157.2| Eremothecium gossypii ABL143Cp (ABL143C), mRNA Length = 2178 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tatatcaagaagataacatc 464 |||||||||||||||||||| Sbjct: 1297 tatatcaagaagataacatc 1316
>gb|AC102608.14| Mus musculus chromosome 3, clone RP23-402L6, complete sequence Length = 185014 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 aaaacaaacccaaacaaataaaca 101 |||||||||||||||||| ||||| Sbjct: 154796 aaaacaaacccaaacaaacaaaca 154819
>emb|AL732567.8| Zebrafish DNA sequence from clone CH211-263A23 in linkage group 6, complete sequence Length = 152840 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 ttctttcttttaacagtcag 177 |||||||||||||||||||| Sbjct: 118142 ttctttcttttaacagtcag 118161
>gb|AE003693.3| Drosophila melanogaster chromosome 3R, section 31 of 118 of the complete sequence Length = 226782 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 atagaaaaacaaacccaaac 92 |||||||||||||||||||| Sbjct: 177637 atagaaaaacaaacccaaac 177656
>emb|AL132639.4|CNS01DT4 Human chromosome 14 DNA sequence BAC R-407N17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196319 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 tgggcacatcataataaaac 631 |||||||||||||||||||| Sbjct: 31972 tgggcacatcataataaaac 31991
>gb|AC005722.1|AC005722 Homo sapiens chromosome 17, clone hRPK.311_F_12, complete sequence Length = 191152 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 76 gaaaaacaaacccaaacaaataaacagtaatg 107 ||||| ||||||||||||||| |||| ||||| Sbjct: 126363 gaaaagcaaacccaaacaaatcaacaataatg 126332
>emb|CT485613.9| Mouse DNA sequence from clone RP23-140I12 on chromosome 17, complete sequence Length = 161949 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gaaaaacaaacccaaacaaataaa 99 |||||| ||||||||||||||||| Sbjct: 48675 gaaaaaaaaacccaaacaaataaa 48698
>gb|AC167700.2| Reniera sp. JGI-2005 clone JGIBAYC-5J13, complete sequence Length = 39670 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 ttgtagttgataaataattg 611 |||||||||||||||||||| Sbjct: 13442 ttgtagttgataaataattg 13423
>emb|AL935147.9| Mouse DNA sequence from clone RP23-33O19 on chromosome 2, complete sequence Length = 241249 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 aaaacaaacccaaacaaataaaca 101 |||||||||||||||||| ||||| Sbjct: 133203 aaaacaaacccaaacaaacaaaca 133180
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tatatcaagaagataacatc 464 |||||||||||||||||||| Sbjct: 129099 tatatcaagaagataacatc 129080
>gb|AC167132.12| Mus musculus chromosome 8, clone RP24-335A22, complete sequence Length = 203284 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tacatccttctttcttttaa 170 |||||||||||||||||||| Sbjct: 54604 tacatccttctttcttttaa 54585
>emb|AL807773.7| Mouse DNA sequence from clone RP23-228L24 on chromosome X, complete sequence Length = 186645 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 tttcttttaacagtcagcaa 180 |||||||||||||||||||| Sbjct: 171605 tttcttttaacagtcagcaa 171586 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,532,268 Number of Sequences: 3902068 Number of extensions: 7532268 Number of successful extensions: 162090 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 137 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 161562 Number of HSP's gapped (non-prelim): 523 length of query: 710 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 687 effective length of database: 17,143,297,704 effective search space: 11777445522648 effective search space used: 11777445522648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
