ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags39m08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103740.1| Zea mays PCO120652 mRNA sequence Length = 1013 Score = 488 bits (246), Expect = e-134 Identities = 351/386 (90%) Strand = Plus / Minus Query: 324 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 383 ||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||| || Sbjct: 631 ttaactgccacccttctgcttgagagtaatcttgtcacctaagctgagtgcaattccctg 572 Query: 384 ggtcttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgct 443 ||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 571 ggtcttgctccttattcggatgtaaccactgagcttgccatcatgttgcttctcaatgct 512 Query: 444 aatgttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaa 503 ||||||||||||||||| || |||||||| ||||||||||||||||| || |||||||| Sbjct: 511 gatgttcaccaaagcatcctcaccaaacacactctttgcataaagattagcagcaaggaa 452 Query: 504 accacattcgccatcaagcgcggacggtggtgttagacacttcatgtttgttgacttgat 563 ||||||||| || || || || ||||||||||| |||||||||||||||||||||||||| Sbjct: 451 accacattctccgtctagtgcagacggtggtgtcagacacttcatgtttgttgacttgat 392 Query: 564 aacatgattcaagaattccttctcatcttgaattactgtattaactgcaaccttgttttc 623 || |||||||||||||||||||| |||||||| || ||||| ||||| ||||| ||||| Sbjct: 391 aatgtgattcaagaattccttctcgtcttgaatcacagtattcactgccaccttattttc 332 Query: 624 ccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtgagat 683 ||| ||||||||||||||||||||||||||||||||||| || || |||||||||||||| Sbjct: 331 ccattcaaattctgcccacatgttccggaaagtaacatcagcacaggtagcaggtgagat 272 Query: 684 ataatccatgatgtcaatgtgaatat 709 |||||||||||||| |||||||||| Sbjct: 271 gtaatccatgatgtcgatgtgaatat 246
>ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 Score = 464 bits (234), Expect = e-127 Identities = 348/386 (90%) Strand = Plus / Minus Query: 324 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 383 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 3111 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 3052 Query: 384 ggtcttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgct 443 ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| Sbjct: 3051 ggtcttgctccttattctgatgtaaccactgagcttgccatcaaactgcttctcgatgct 2992 Query: 444 aatgttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaa 503 || || |||||||||||||| || || || |||||||||||||| || ||||| || || Sbjct: 2991 gatatttaccaaagcatcttcaccgaaaacactctttgcataaaggttagcggcgagaaa 2932 Query: 504 accacattcgccatcaagcgcggacggtggtgttagacacttcatgtttgttgacttgat 563 ||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2931 accgcattctccgtcaagcgcagacggtggtgttagacacttcatgtttgttgacttgat 2872 Query: 564 aacatgattcaagaattccttctcatcttgaattactgtattaactgcaaccttgttttc 623 | ||||| ||| || |||||||||| ||||| || ||||| ||||| ||||||||||| Sbjct: 2871 gatatgatccaaaaactccttctcattctgaatgacagtattcactgccaccttgttttc 2812 Query: 624 ccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtgagat 683 |||||||||||||||||||||||| |||||||||||||| ||||| || || |||||||| Sbjct: 2811 ccactcaaattctgcccacatgttacggaaagtaacatcagcgcaagttgctggtgagat 2752 Query: 684 ataatccatgatgtcaatgtgaatat 709 |||||||||||||||||||||||||| Sbjct: 2751 ataatccatgatgtcaatgtgaatat 2726
>gb|BT017052.1| Zea mays clone EL01N0353H03.c mRNA sequence Length = 1032 Score = 424 bits (214), Expect = e-115 Identities = 343/386 (88%) Strand = Plus / Minus Query: 324 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 383 ||||||||| || ||||||||||| || |||||||| || ||||||||||||||||| || Sbjct: 638 ttaactgccacctttctgcttgagagtgatcttgtcccctaagctgagtgcaattccctg 579 Query: 384 ggtcttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgct 443 ||||||||||||||||| ||||| || ||||||||||| ||| ||||||||||||||| Sbjct: 578 ggtcttgctccttattcgaatgtagccactgagcttgccgtcatgttgcttctcaatgct 519 Query: 444 aatgttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaa 503 |||||||||||||| || || |||||||| |||||||||||||| || || |||||||| Sbjct: 518 gatgttcaccaaagcgtcctcgccaaacacactctttgcataaaggttagcagcaaggaa 459 Query: 504 accacattcgccatcaagcgcggacggtggtgttagacacttcatgtttgttgacttgat 563 ||||||||| ||||| || || ||||||||||| ||||| |||||||| ||||||||||| Sbjct: 458 accacattccccatccagtgcagacggtggtgtcagacatttcatgttcgttgacttgat 399 Query: 564 aacatgattcaagaattccttctcatcttgaattactgtattaactgcaaccttgttttc 623 || ||||||||||||||||||||||| ||||| || ||||| || || ||||| ||||| Sbjct: 398 aatgtgattcaagaattccttctcatcctgaatcacagtattcacagccaccttattttc 339 Query: 624 ccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtgagat 683 ||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 338 ccattcaaattctgcccacatgttccggaaagtaacatctgcacacgtagcaggtgagat 279 Query: 684 ataatccatgatgtcaatgtgaatat 709 |||||||||||||| |||||||||| Sbjct: 278 gtaatccatgatgtcgatgtgaatat 253
>gb|AY109245.1| Zea mays PCO147899 mRNA sequence Length = 751 Score = 355 bits (179), Expect = 1e-94 Identities = 329/379 (86%) Strand = Plus / Minus Query: 329 tgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgggtct 388 ||||||||||||| || ||||| ||||||||||| |||||||| |||||||||||||||| Sbjct: 711 tgcctcccttctgttttagggtgatcttgtctcctaagctgagcgcaattccttgggtct 652 Query: 389 tgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgctaatgt 448 |||| ||||| |||||||| || | | ||||||||| | |||||||||| || || | Sbjct: 651 tgcttcttatcctgatgtagccagtcaacttgccatcggcctgcttctcaacactgatat 592 Query: 449 tcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaaaccac 508 |||||| ||| || || |||||||| ||||| ||||| |||||||| |||||||| |||| Sbjct: 591 tcaccagagcgtcctcgccaaacacactcttggcatagagatttgcagcaaggaacccac 532 Query: 509 attcgccatcaagcgcggacggtggtgttagacacttcatgtttgttgacttgataacat 568 |||| ||||| ||||| || |||||||||||||||||||||||||| ||||| |||| || Sbjct: 531 attctccatcgagcgcagatggtggtgttagacacttcatgtttgtggacttaataatat 472 Query: 569 gattcaagaattccttctcatcttgaattactgtattaactgcaaccttgttttcccact 628 |||||||||||||||||||||| || || || ||||| || || ||||| |||||||||| Sbjct: 471 gattcaagaattccttctcatcctggatcacagtattcaccgccaccttattttcccact 412 Query: 629 caaattctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtgagatataat 688 ||||||||||||||||||||||||| | |||||| || ||||||||||||||||| |||| Sbjct: 411 caaattctgcccacatgttccggaatgcaacatcagcacatgtagcaggtgagatgtaat 352 Query: 689 ccatgatgtcaatgtgaat 707 |||| || ||||||||||| Sbjct: 351 ccataatatcaatgtgaat 333
>dbj|AK120719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G07, full insert sequence Length = 3332 Score = 353 bits (178), Expect = 5e-94 Identities = 331/382 (86%) Strand = Plus / Minus Query: 328 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgggtc 387 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||||||| Sbjct: 2968 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 2909 Query: 388 ttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgctaatg 447 || |||| ||||||||| || || || ||||||||||| ||||||| |||| ||| ||| Sbjct: 2908 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 2849 Query: 448 ttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaaacca 507 |||||||| ||||| || ||||| || ||||| ||||| ||||| || || | || ||| Sbjct: 2848 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 2789 Query: 508 cattcgccatcaagcgcggacggtggtgttagacacttcatgtttgttgacttgataaca 567 ||||| ||||||||||| || |||||||||||||||||||| ||||| || ||||| | | Sbjct: 2788 cattctccatcaagcgcagatggtggtgttagacacttcatatttgtcgatttgatgata 2729 Query: 568 tgattcaagaattccttctcatcttgaattactgtattaactgcaaccttgttttcccac 627 |||| ||| |||||||||||||| ||||| || || || || || ||||||||||||||| Sbjct: 2728 tgatccaaaaattccttctcatcctgaatgacagtgttcacagccaccttgttttcccac 2669 Query: 628 tcaaattctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtgagatataa 687 |||||||||||||||||||||||||||| |||||| || || |||||||||||||||||| Sbjct: 2668 tcaaattctgcccacatgttccggaaagcaacatcggcacaagtagcaggtgagatataa 2609 Query: 688 tccatgatgtcaatgtgaatat 709 |||||||||||||||||||||| Sbjct: 2608 tccatgatgtcaatgtgaatat 2587
>dbj|AK120713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002A09, full insert sequence Length = 3332 Score = 353 bits (178), Expect = 5e-94 Identities = 331/382 (86%) Strand = Plus / Minus Query: 328 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgggtc 387 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||||||| Sbjct: 2968 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 2909 Query: 388 ttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgctaatg 447 || |||| ||||||||| || || || ||||||||||| ||||||| |||| ||| ||| Sbjct: 2908 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 2849 Query: 448 ttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaaacca 507 |||||||| ||||| || ||||| || ||||| ||||| ||||| || || | || ||| Sbjct: 2848 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 2789 Query: 508 cattcgccatcaagcgcggacggtggtgttagacacttcatgtttgttgacttgataaca 567 ||||| ||||||||||| || |||||||||||||||||||| ||||| || ||||| | | Sbjct: 2788 cattctccatcaagcgcagatggtggtgttagacacttcatatttgtcgatttgatgata 2729 Query: 568 tgattcaagaattccttctcatcttgaattactgtattaactgcaaccttgttttcccac 627 |||| ||| |||||||||||||| ||||| || || || || || ||||||||||||||| Sbjct: 2728 tgatccaaaaattccttctcatcctgaatgacagtgttcacagccaccttgttttcccac 2669 Query: 628 tcaaattctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtgagatataa 687 |||||||||||||||||||||||||||| |||||| || || |||||||||||||||||| Sbjct: 2668 tcaaattctgcccacatgttccggaaagcaacatcggcacaagtagcaggtgagatataa 2609 Query: 688 tccatgatgtcaatgtgaatat 709 |||||||||||||||||||||| Sbjct: 2608 tccatgatgtcaatgtgaatat 2587
>dbj|AK069716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F21, full insert sequence Length = 3363 Score = 353 bits (178), Expect = 5e-94 Identities = 331/382 (86%) Strand = Plus / Minus Query: 328 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgggtc 387 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||||||| Sbjct: 2999 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 2940 Query: 388 ttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgctaatg 447 || |||| ||||||||| || || || ||||||||||| ||||||| |||| ||| ||| Sbjct: 2939 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 2880 Query: 448 ttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaaacca 507 |||||||| ||||| || ||||| || ||||| ||||| ||||| || || | || ||| Sbjct: 2879 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 2820 Query: 508 cattcgccatcaagcgcggacggtggtgttagacacttcatgtttgttgacttgataaca 567 ||||| ||||||||||| || |||||||||||||||||||| ||||| || ||||| | | Sbjct: 2819 cattctccatcaagcgcagatggtggtgttagacacttcatatttgtcgatttgatgata 2760 Query: 568 tgattcaagaattccttctcatcttgaattactgtattaactgcaaccttgttttcccac 627 |||| ||| |||||||||||||| ||||| || || || || || ||||||||||||||| Sbjct: 2759 tgatccaaaaattccttctcatcctgaatgacagtgttcacagccaccttgttttcccac 2700 Query: 628 tcaaattctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtgagatataa 687 |||||||||||||||||||||||||||| |||||| || || |||||||||||||||||| Sbjct: 2699 tcaaattctgcccacatgttccggaaagcaacatcggcacaagtagcaggtgagatataa 2640 Query: 688 tccatgatgtcaatgtgaatat 709 |||||||||||||||||||||| Sbjct: 2639 tccatgatgtcaatgtgaatat 2618
>dbj|AK061958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F11, full insert sequence Length = 1741 Score = 353 bits (178), Expect = 5e-94 Identities = 331/382 (86%) Strand = Plus / Minus Query: 328 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgggtc 387 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||||||| Sbjct: 1377 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 1318 Query: 388 ttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgctaatg 447 || |||| ||||||||| || || || ||||||||||| ||||||| |||| ||| ||| Sbjct: 1317 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 1258 Query: 448 ttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaaacca 507 |||||||| ||||| || ||||| || ||||| ||||| ||||| || || | || ||| Sbjct: 1257 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 1198 Query: 508 cattcgccatcaagcgcggacggtggtgttagacacttcatgtttgttgacttgataaca 567 ||||| ||||||||||| || |||||||||||||||||||| ||||| || ||||| | | Sbjct: 1197 cattctccatcaagcgcagatggtggtgttagacacttcatatttgtcgatttgatgata 1138 Query: 568 tgattcaagaattccttctcatcttgaattactgtattaactgcaaccttgttttcccac 627 |||| ||| |||||||||||||| ||||| || || || || || ||||||||||||||| Sbjct: 1137 tgatccaaaaattccttctcatcctgaatgacagtgttcacagccaccttgttttcccac 1078 Query: 628 tcaaattctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtgagatataa 687 |||||||||||||||||||||||||||| |||||| || || |||||||||||||||||| Sbjct: 1077 tcaaattctgcccacatgttccggaaagcaacatcggcacaagtagcaggtgagatataa 1018 Query: 688 tccatgatgtcaatgtgaatat 709 |||||||||||||||||||||| Sbjct: 1017 tccatgatgtcaatgtgaatat 996
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 324 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 383 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 10020837 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 10020896 Query: 384 ggtcttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgct 443 ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| Sbjct: 10020897 ggtcttgctccttattctgatgtaaccactgagcttgccatcaaactgcttctcgatgct 10020956 Query: 444 aatgttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaa 503 || || |||||||||||||| || || || |||||||||||||| || ||||| || || Sbjct: 10020957 gatatttaccaaagcatcttcaccgaaaacactctttgcataaaggttagcggcgagaaa 10021016 Query: 504 accacattcgccatcaagcgc 524 ||| ||||| || |||||||| Sbjct: 10021017 accgcattctccgtcaagcgc 10021037 Score = 153 bits (77), Expect = 9e-34 Identities = 92/97 (94%) Strand = Plus / Plus Query: 613 accttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgta 672 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 10022550 accttgttttcccactcaaattctgcccacatgttacggaaagtaacatcagcgcaagtt 10022609 Query: 673 gcaggtgagatataatccatgatgtcaatgtgaatat 709 || |||||||||||||||||||||||||||||||||| Sbjct: 10022610 gctggtgagatataatccatgatgtcaatgtgaatat 10022646 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 527 acggtggtgttagacacttcatgtttgttgacttgataacatgattcaagaattccttct 586 ||||||||||||||||||||||||||||||||||||| | ||||| ||| || ||||||| Sbjct: 10021744 acggtggtgttagacacttcatgtttgttgacttgatgatatgatccaaaaactccttct 10021803 Query: 587 catcttgaattactgtattaactgcaacct 616 ||| ||||| || ||||| ||||| |||| Sbjct: 10021804 cattctgaatgacagtattcactgccacct 10021833
>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F09 Length = 132713 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 324 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 383 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 101119 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 101178 Query: 384 ggtcttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgct 443 ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| Sbjct: 101179 ggtcttgctccttattctgatgtaaccactgagcttgccatcaaactgcttctcgatgct 101238 Query: 444 aatgttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaa 503 || || |||||||||||||| || || || |||||||||||||| || ||||| || || Sbjct: 101239 gatatttaccaaagcatcttcaccgaaaacactctttgcataaaggttagcggcgagaaa 101298 Query: 504 accacattcgccatcaagcgc 524 ||| ||||| || |||||||| Sbjct: 101299 accgcattctccgtcaagcgc 101319 Score = 153 bits (77), Expect = 9e-34 Identities = 92/97 (94%) Strand = Plus / Plus Query: 613 accttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgta 672 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 102832 accttgttttcccactcaaattctgcccacatgttacggaaagtaacatcagcgcaagtt 102891 Query: 673 gcaggtgagatataatccatgatgtcaatgtgaatat 709 || |||||||||||||||||||||||||||||||||| Sbjct: 102892 gctggtgagatataatccatgatgtcaatgtgaatat 102928 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 527 acggtggtgttagacacttcatgtttgttgacttgataacatgattcaagaattccttct 586 ||||||||||||||||||||||||||||||||||||| | ||||| ||| || ||||||| Sbjct: 102026 acggtggtgttagacacttcatgtttgttgacttgatgatatgatccaaaaactccttct 102085 Query: 587 catcttgaattactgtattaactgcaacct 616 ||| ||||| || ||||| ||||| |||| Sbjct: 102086 cattctgaatgacagtattcactgccacct 102115
>dbj|AP002804.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0021A04 Length = 50487 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 324 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 383 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 48394 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 48453 Query: 384 ggtcttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgct 443 ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| Sbjct: 48454 ggtcttgctccttattctgatgtaaccactgagcttgccatcaaactgcttctcgatgct 48513 Query: 444 aatgttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaa 503 || || |||||||||||||| || || || |||||||||||||| || ||||| || || Sbjct: 48514 gatatttaccaaagcatcttcaccgaaaacactctttgcataaaggttagcggcgagaaa 48573 Query: 504 accacattcgccatcaagcgc 524 ||| ||||| || |||||||| Sbjct: 48574 accgcattctccgtcaagcgc 48594 Score = 153 bits (77), Expect = 9e-34 Identities = 92/97 (94%) Strand = Plus / Plus Query: 613 accttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgta 672 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 50107 accttgttttcccactcaaattctgcccacatgttacggaaagtaacatcagcgcaagtt 50166 Query: 673 gcaggtgagatataatccatgatgtcaatgtgaatat 709 || |||||||||||||||||||||||||||||||||| Sbjct: 50167 gctggtgagatataatccatgatgtcaatgtgaatat 50203 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 527 acggtggtgttagacacttcatgtttgttgacttgataacatgattcaagaattccttct 586 ||||||||||||||||||||||||||||||||||||| | ||||| ||| || ||||||| Sbjct: 49301 acggtggtgttagacacttcatgtttgttgacttgatgatatgatccaaaaactccttct 49360 Query: 587 catcttgaattactgtattaactgcaacct 616 ||| ||||| || ||||| ||||| |||| Sbjct: 49361 cattctgaatgacagtattcactgccacct 49390
>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0036E02 Length = 145931 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 324 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 383 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 115330 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 115389 Query: 384 ggtcttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgct 443 ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| Sbjct: 115390 ggtcttgctccttattctgatgtaaccactgagcttgccatcaaactgcttctcgatgct 115449 Query: 444 aatgttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaa 503 || || |||||||||||||| || || || |||||||||||||| || ||||| || || Sbjct: 115450 gatatttaccaaagcatcttcaccgaaaacactctttgcataaaggttagcggcgagaaa 115509 Query: 504 accacattcgccatcaagcgc 524 ||| ||||| || |||||||| Sbjct: 115510 accgcattctccgtcaagcgc 115530 Score = 153 bits (77), Expect = 9e-34 Identities = 92/97 (94%) Strand = Plus / Plus Query: 613 accttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgta 672 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 117043 accttgttttcccactcaaattctgcccacatgttacggaaagtaacatcagcgcaagtt 117102 Query: 673 gcaggtgagatataatccatgatgtcaatgtgaatat 709 || |||||||||||||||||||||||||||||||||| Sbjct: 117103 gctggtgagatataatccatgatgtcaatgtgaatat 117139 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 527 acggtggtgttagacacttcatgtttgttgacttgataacatgattcaagaattccttct 586 ||||||||||||||||||||||||||||||||||||| | ||||| ||| || ||||||| Sbjct: 116237 acggtggtgttagacacttcatgtttgttgacttgatgatatgatccaaaaactccttct 116296 Query: 587 catcttgaattactgtattaactgcaacct 616 ||| ||||| || ||||| ||||| |||| Sbjct: 116297 cattctgaatgacagtattcactgccacct 116326
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 161 bits (81), Expect = 4e-36 Identities = 93/97 (95%) Strand = Plus / Plus Query: 613 accttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgta 672 ||||||||||||||||||||||||||||||||||||||||||| |||||| || || ||| Sbjct: 17976 accttgttttcccactcaaattctgcccacatgttccggaaagcaacatcggcacaagta 18035 Query: 673 gcaggtgagatataatccatgatgtcaatgtgaatat 709 ||||||||||||||||||||||||||||||||||||| Sbjct: 18036 gcaggtgagatataatccatgatgtcaatgtgaatat 18072 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 328 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgggtc 387 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||||||| Sbjct: 16550 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 16609 Query: 388 ttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgctaatg 447 || |||| ||||||||| || || || ||||||||||| ||||||| |||| ||| ||| Sbjct: 16610 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 16669 Query: 448 ttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaaacca 507 |||||||| ||||| || ||||| || ||||| ||||| ||||| || || | || ||| Sbjct: 16670 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 16729 Query: 508 cattcgccatcaagcgc 524 ||||| ||||||||||| Sbjct: 16730 cattctccatcaagcgc 16746 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 527 acggtggtgttagacacttcatgtttgttgacttgataacatgattcaagaattccttct 586 |||||||||||||||||||||| ||||| || ||||| | ||||| ||| |||||||||| Sbjct: 17511 acggtggtgttagacacttcatatttgtcgatttgatgatatgatccaaaaattccttct 17570 Query: 587 catcttgaat 596 |||| ||||| Sbjct: 17571 catcctgaat 17580
>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055G24 map S20116S, complete sequence Length = 174210 Score = 161 bits (81), Expect = 4e-36 Identities = 93/97 (95%) Strand = Plus / Plus Query: 613 accttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgta 672 ||||||||||||||||||||||||||||||||||||||||||| |||||| || || ||| Sbjct: 167441 accttgttttcccactcaaattctgcccacatgttccggaaagcaacatcggcacaagta 167500 Query: 673 gcaggtgagatataatccatgatgtcaatgtgaatat 709 ||||||||||||||||||||||||||||||||||||| Sbjct: 167501 gcaggtgagatataatccatgatgtcaatgtgaatat 167537 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 328 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgggtc 387 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||||||| Sbjct: 166015 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 166074 Query: 388 ttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgctaatg 447 || |||| ||||||||| || || || ||||||||||| ||||||| |||| ||| ||| Sbjct: 166075 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 166134 Query: 448 ttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaaacca 507 |||||||| ||||| || ||||| || ||||| ||||| ||||| || || | || ||| Sbjct: 166135 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 166194 Query: 508 cattcgccatcaagcgc 524 ||||| ||||||||||| Sbjct: 166195 cattctccatcaagcgc 166211 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 527 acggtggtgttagacacttcatgtttgttgacttgataacatgattcaagaattccttct 586 |||||||||||||||||||||| ||||| || ||||| | ||||| ||| |||||||||| Sbjct: 166976 acggtggtgttagacacttcatatttgtcgatttgatgatatgatccaaaaattccttct 167035 Query: 587 catcttgaat 596 |||| ||||| Sbjct: 167036 catcctgaat 167045
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 161 bits (81), Expect = 4e-36 Identities = 93/97 (95%) Strand = Plus / Plus Query: 613 accttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgta 672 ||||||||||||||||||||||||||||||||||||||||||| |||||| || || ||| Sbjct: 3650304 accttgttttcccactcaaattctgcccacatgttccggaaagcaacatcggcacaagta 3650363 Query: 673 gcaggtgagatataatccatgatgtcaatgtgaatat 709 ||||||||||||||||||||||||||||||||||||| Sbjct: 3650364 gcaggtgagatataatccatgatgtcaatgtgaatat 3650400 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 328 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgggtc 387 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||||||| Sbjct: 3648878 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 3648937 Query: 388 ttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgctaatg 447 || |||| ||||||||| || || || ||||||||||| ||||||| |||| ||| ||| Sbjct: 3648938 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 3648997 Query: 448 ttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaaacca 507 |||||||| ||||| || ||||| || ||||| ||||| ||||| || || | || ||| Sbjct: 3648998 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 3649057 Query: 508 cattcgccatcaagcgc 524 ||||| ||||||||||| Sbjct: 3649058 cattctccatcaagcgc 3649074 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 527 acggtggtgttagacacttcatgtttgttgacttgataacatgattcaagaattccttct 586 |||||||||||||||||||||| ||||| || ||||| | ||||| ||| |||||||||| Sbjct: 3649839 acggtggtgttagacacttcatatttgtcgatttgatgatatgatccaaaaattccttct 3649898 Query: 587 catcttgaat 596 |||| ||||| Sbjct: 3649899 catcctgaat 3649908
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 161 bits (81), Expect = 4e-36 Identities = 93/97 (95%) Strand = Plus / Plus Query: 613 accttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgta 672 ||||||||||||||||||||||||||||||||||||||||||| |||||| || || ||| Sbjct: 3658998 accttgttttcccactcaaattctgcccacatgttccggaaagcaacatcggcacaagta 3659057 Query: 673 gcaggtgagatataatccatgatgtcaatgtgaatat 709 ||||||||||||||||||||||||||||||||||||| Sbjct: 3659058 gcaggtgagatataatccatgatgtcaatgtgaatat 3659094 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 328 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgggtc 387 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||||||| Sbjct: 3657572 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 3657631 Query: 388 ttgctccttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgctaatg 447 || |||| ||||||||| || || || ||||||||||| ||||||| |||| ||| ||| Sbjct: 3657632 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 3657691 Query: 448 ttcaccaaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaaacca 507 |||||||| ||||| || ||||| || ||||| ||||| ||||| || || | || ||| Sbjct: 3657692 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 3657751 Query: 508 cattcgccatcaagcgc 524 ||||| ||||||||||| Sbjct: 3657752 cattctccatcaagcgc 3657768 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 527 acggtggtgttagacacttcatgtttgttgacttgataacatgattcaagaattccttct 586 |||||||||||||||||||||| ||||| || ||||| | ||||| ||| |||||||||| Sbjct: 3658533 acggtggtgttagacacttcatatttgtcgatttgatgatatgatccaaaaattccttct 3658592 Query: 587 catcttgaat 596 |||| ||||| Sbjct: 3658593 catcctgaat 3658602
>ref|NM_119298.2| Arabidopsis thaliana clathrin binding AT4G31490 mRNA, complete cds Length = 3306 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 610 gcaaccttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcat 669 ||||||||||||||||| ||||| ||||||||||| | | ||||| ||| |||| ||| Sbjct: 2679 gcaaccttgttttcccattcaaactctgcccacatagttctgaaagcaacctctgagcac 2620 Query: 670 gtagcaggtgagatataatccatgatgtcaatgtg 704 |||||| |||||||| |||||||| |||||||| Sbjct: 2619 acagcaggggagatatagtccatgatatcaatgtg 2585 Score = 61.9 bits (31), Expect = 3e-06 Identities = 142/179 (79%) Strand = Plus / Minus Query: 334 cccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgggtcttgctc 393 ||||| || |||||||| || |||||||| | || || ||||| ||||| ||||||||| Sbjct: 2955 cccttttgtttgagggtgattttgtctccaagacttagagcaatcccttgcgtcttgctc 2896 Query: 394 cttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgctaatgttcacc 453 ||||| || |||||||| || | | ||||| |||||||||||| || | ||||| Sbjct: 2895 cttatccttatgtaaccactcaatgttccatccgtttgcttctcaatactcaaattcaca 2836 Query: 454 aaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaaaccacattc 512 | |||||| || |||||||| || |||||||| | ||||| |||||||| |||||||| Sbjct: 2835 agagcatcctcaccaaacacactttttgcatataagtttgctgcaaggaatccacattc 2777
>emb|AJ720879.1| Gallus gallus mRNA for hypothetical protein, clone 28l17 Length = 3348 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 600 tgtattaactgcaaccttgttttcccactcaaattctgcccacat 644 |||||| |||| ||| ||||||||||||||||||||||||||||| Sbjct: 2771 tgtattcactgtaactttgttttcccactcaaattctgcccacat 2727 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 682 atataatccatgatgtcaatgtgaatat 709 ||||||||||| |||||||||||||||| Sbjct: 2689 atataatccattatgtcaatgtgaatat 2662
>ref|NM_001006467.1| Gallus gallus coatomer protein complex, subunit beta (COPB), mRNA Length = 3348 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 600 tgtattaactgcaaccttgttttcccactcaaattctgcccacat 644 |||||| |||| ||| ||||||||||||||||||||||||||||| Sbjct: 2771 tgtattcactgtaactttgttttcccactcaaattctgcccacat 2727 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 682 atataatccatgatgtcaatgtgaatat 709 ||||||||||| |||||||||||||||| Sbjct: 2689 atataatccattatgtcaatgtgaatat 2662
>emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BAC clone F3L17 (ESSA project) Length = 94319 Score = 63.9 bits (32), Expect = 7e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 613 accttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgta 672 |||||||||||||| ||||| ||||||||||| | | ||||| ||| |||| ||| | Sbjct: 50114 accttgttttcccattcaaactctgcccacatagttctgaaagcaacctctgagcacaca 50055 Query: 673 gcaggtgagatataatccatgatgtcaatgtg 704 ||||| |||||||| |||||||| |||||||| Sbjct: 50054 gcaggggagatatagtccatgatatcaatgtg 50023 Score = 61.9 bits (31), Expect = 3e-06 Identities = 142/179 (79%) Strand = Plus / Minus Query: 334 cccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgggtcttgctc 393 ||||| || |||||||| || |||||||| | || || ||||| ||||| ||||||||| Sbjct: 50562 cccttttgtttgagggtgattttgtctccaagacttagagcaatcccttgcgtcttgctc 50503 Query: 394 cttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgctaatgttcacc 453 ||||| || |||||||| || | | ||||| |||||||||||| || | ||||| Sbjct: 50502 cttatccttatgtaaccactcaatgttccatccgtttgcttctcaatactcaaattcaca 50443 Query: 454 aaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaaaccacattc 512 | |||||| || |||||||| || |||||||| | ||||| |||||||| |||||||| Sbjct: 50442 agagcatcctcaccaaacacactttttgcatataagtttgctgcaaggaatccacattc 50384 Score = 48.1 bits (24), Expect = 0.040 Identities = 75/92 (81%) Strand = Plus / Minus Query: 613 accttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgta 672 |||||||||||||| || || ||||||||||| | | ||||| ||| |||| || | Sbjct: 44808 accttgttttcccattcgaactctgcccacatagttctgaaagcaacctctgaacacaca 44749 Query: 673 gcaggtgagatataatccatgatgtcaatgtg 704 ||||| |||||||| |||||||| |||||||| Sbjct: 44748 gcaggggagatatagtccatgatatcaatgtg 44717 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 373 gcaattccttgggtcttgctccttattctgatgtaacc 410 ||||| ||||| |||||||||||||| || |||||||| Sbjct: 45214 gcaatcccttgcgtcttgctccttatccttatgtaacc 45177
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 63.9 bits (32), Expect = 7e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 613 accttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgta 672 |||||||||||||| ||||| ||||||||||| | | ||||| ||| |||| ||| | Sbjct: 38179 accttgttttcccattcaaactctgcccacatagttctgaaagcaacctctgagcacaca 38120 Query: 673 gcaggtgagatataatccatgatgtcaatgtg 704 ||||| |||||||| |||||||| |||||||| Sbjct: 38119 gcaggggagatatagtccatgatatcaatgtg 38088 Score = 61.9 bits (31), Expect = 3e-06 Identities = 142/179 (79%) Strand = Plus / Minus Query: 334 cccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgggtcttgctc 393 ||||| || |||||||| || |||||||| | || || ||||| ||||| ||||||||| Sbjct: 38627 cccttttgtttgagggtgattttgtctccaagacttagagcaatcccttgcgtcttgctc 38568 Query: 394 cttattctgatgtaaccgctgagcttgccatcaacttgcttctcaatgctaatgttcacc 453 ||||| || |||||||| || | | ||||| |||||||||||| || | ||||| Sbjct: 38567 cttatccttatgtaaccactcaatgttccatccgtttgcttctcaatactcaaattcaca 38508 Query: 454 aaagcatcttctccaaacacgctctttgcataaagatttgcggcaaggaaaccacattc 512 | |||||| || |||||||| || |||||||| | ||||| |||||||| |||||||| Sbjct: 38507 agagcatcctcaccaaacacactttttgcatataagtttgctgcaaggaatccacattc 38449 Score = 48.1 bits (24), Expect = 0.040 Identities = 75/92 (81%) Strand = Plus / Minus Query: 613 accttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcatgta 672 |||||||||||||| || || ||||||||||| | | ||||| ||| |||| || | Sbjct: 32873 accttgttttcccattcgaactctgcccacatagttctgaaagcaacctctgaacacaca 32814 Query: 673 gcaggtgagatataatccatgatgtcaatgtg 704 ||||| |||||||| |||||||| |||||||| Sbjct: 32813 gcaggggagatatagtccatgatatcaatgtg 32782 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 373 gcaattccttgggtcttgctccttattctgatgtaacc 410 ||||| ||||| |||||||||||||| || |||||||| Sbjct: 33279 gcaatcccttgcgtcttgctccttatccttatgtaacc 33242
>ref|NM_119297.2| Arabidopsis thaliana clathrin binding AT4G31480 mRNA, complete cds Length = 3296 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 610 gcaaccttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcat 669 ||||||||||||||||| || || ||||||||||| | | ||||| ||| |||| || Sbjct: 2630 gcaaccttgttttcccattcgaactctgcccacatagttctgaaagcaacctctgaacac 2571 Query: 670 gtagcaggtgagatataatccatgatgtcaatgtg 704 |||||| |||||||| |||||||| |||||||| Sbjct: 2570 acagcaggggagatatagtccatgatatcaatgtg 2536 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 373 gcaattccttgggtcttgctccttattctgatgtaacc 410 ||||| ||||| |||||||||||||| || |||||||| Sbjct: 2867 gcaatcccttgcgtcttgctccttatccttatgtaacc 2830 Score = 42.1 bits (21), Expect = 2.5 Identities = 108/137 (78%) Strand = Plus / Minus Query: 429 ttgcttctcaatgctaatgttcaccaaagcatcttctccaaacacgctctttgcataaag 488 |||||||||||| || | ||||| | |||||| || ||||| || || ||||| || | Sbjct: 2811 ttgcttctcaatactcacattcacaagagcatcctcaccaaatacactttttgcgtataa 2752 Query: 489 atttgcggcaaggaaaccacattcgccatcaagcgcggacggtggtgttagacacttcat 548 ||||| |||||||| ||||||||||| || | ||||| || | || ||||| ||||| Sbjct: 2751 gtttgctgcaaggaatccacattcgccttctattgcggatggagcagtgagacatttcat 2692 Query: 549 gtttgttgacttgataa 565 |||||| || ||||||| Sbjct: 2691 gtttgtagatttgataa 2675
>dbj|AK221668.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL09-97-P16 Length = 1212 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 610 gcaaccttgttttcccactcaaattctgcccacatgttccggaaagtaacatctgcgcat 669 ||||||||||||||||| || || ||||||||||| | | ||||| ||| |||| || Sbjct: 585 gcaaccttgttttcccattcgaactctgcccacatagttctgaaagcaacctctgaacac 526 Query: 670 gtagcaggtgagatataatccatgatgtcaatgtg 704 |||||| |||||||| |||||||| |||||||| Sbjct: 525 acagcaggggagatatagtccatgatatcaatgtg 491 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 373 gcaattccttgggtcttgctccttattctgatgtaacc 410 ||||| ||||| |||||||||||||| || |||||||| Sbjct: 822 gcaatcccttgcgtcttgctccttatccttatgtaacc 785 Score = 42.1 bits (21), Expect = 2.5 Identities = 108/137 (78%) Strand = Plus / Minus Query: 429 ttgcttctcaatgctaatgttcaccaaagcatcttctccaaacacgctctttgcataaag 488 |||||||||||| || | ||||| | |||||| || ||||| || || ||||| || | Sbjct: 766 ttgcttctcaatactcacattcacaagagcatcctcaccaaatacactttttgcgtataa 707 Query: 489 atttgcggcaaggaaaccacattcgccatcaagcgcggacggtggtgttagacacttcat 548 ||||| |||||||| ||||||||||| || | ||||| || | || ||||| ||||| Sbjct: 706 gtttgctgcaaggaatccacattcgccttctattgcggatggagcagtgagacatttcat 647 Query: 549 gtttgttgacttgataa 565 |||||| || ||||||| Sbjct: 646 gtttgtagatttgataa 630
>ref|XM_615637.2| PREDICTED: Bos taurus similar to coatomer protein complex, subunit beta, transcript variant 2 (LOC535533), mRNA Length = 3201 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtgaatat 709 |||||| |||||||||||||||||||||| Sbjct: 2532 gatatagtccatgatgtcaatgtgaatat 2504 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 616 ttgttttcccactcaaattctgcccacat 644 ||||||||||| |||||||| |||||||| Sbjct: 2597 ttgttttcccattcaaattcagcccacat 2569
>ref|XM_865359.1| PREDICTED: Bos taurus similar to coatomer protein complex, subunit beta, transcript variant 3 (LOC535533), mRNA Length = 3260 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtgaatat 709 |||||| |||||||||||||||||||||| Sbjct: 2547 gatatagtccatgatgtcaatgtgaatat 2519 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 616 ttgttttcccactcaaattctgcccacat 644 ||||||||||| |||||||| |||||||| Sbjct: 2612 ttgttttcccattcaaattcagcccacat 2584
>ref|XM_875628.1| PREDICTED: Bos taurus similar to coatomer protein complex, subunit beta, transcript variant 4 (LOC535533), mRNA Length = 3245 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtgaatat 709 |||||| |||||||||||||||||||||| Sbjct: 2532 gatatagtccatgatgtcaatgtgaatat 2504 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 616 ttgttttcccactcaaattctgcccacat 644 ||||||||||| |||||||| |||||||| Sbjct: 2597 ttgttttcccattcaaattcagcccacat 2569
>ref|XM_788019.1| PREDICTED: Strongylocentrotus purpuratus similar to Coatomer beta subunit (Beta-coat protein) (Beta-COP) (LOC588329), mRNA Length = 1149 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 613 accttgttttcccactcaaattctgcccacatg 645 |||||||||||||||||||| || ||||||||| Sbjct: 782 accttgttttcccactcaaactcagcccacatg 750
>dbj|AB168330.1| Macaca fascicularis testis cDNA clone: QtsA-11283, similar to human coatomer protein complex, subunit beta (COPB), mRNA, RefSeq: NM_016451.3 Length = 2224 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtgaatat 709 |||||| |||||||||||||||||||||| Sbjct: 1485 gatatagtccatgatgtcaatgtgaatat 1457
>gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomic sequence, complete sequence Length = 91755 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 289 ctacatgacacaattgcaacagattg 314 |||||||| ||||||||||||||||| Sbjct: 20673 ctacatgagacaattgcaacagattg 20648
>emb|AL109915.10|HSDJ120N9 Human DNA sequence from clone RP1-120N9 on chromosome 6q13-15 Contains the SNAP91 gene for synaptosomal-associated protein, 91 kD homolog (mouse) (KIAA0656) and a CpG island, complete sequence Length = 167018 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 215 aatcttttgtacattataaaaa 236 |||||||||||||||||||||| Sbjct: 106168 aatcttttgtacattataaaaa 106189
>ref|XM_508297.1| PREDICTED: Pan troglodytes similar to coatomer protein complex, subunit beta; beta coat protein (LOC451039), mRNA Length = 2834 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 616 ttgttttcccactcaaattctgcccacat 644 ||||||||||| |||||||| |||||||| Sbjct: 2528 ttgttttcccattcaaattcggcccacat 2500 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtgaatat 709 |||||| ||||||||||| |||||||||| Sbjct: 2463 gatatagtccatgatgtcgatgtgaatat 2435
>gb|BC081657.1| Danio rerio coatomer protein complex, subunit beta 1, mRNA (cDNA clone MGC:92482 IMAGE:7045742), complete cds Length = 3302 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 612 aaccttgttttcccactcaaattctgcccacat 644 |||||| |||||||||||||| || |||||||| Sbjct: 2683 aaccttattttcccactcaaactcagcccacat 2651
>ref|XM_370363.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06860.4) partial mRNA Length = 2877 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 613 accttgttttcccactcaaattctgcccacatg 645 |||||||| ||||||||||| |||| ||||||| Sbjct: 2582 accttgttctcccactcaaactctgtccacatg 2550
>gb|AE006367.1| Lactococcus lactis subsp. lactis IL1403 section 129 of 218 of the complete genome Length = 11901 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 gttttttgtcaaaaaaggcct 98 ||||||||||||||||||||| Sbjct: 4932 gttttttgtcaaaaaaggcct 4912
>ref|XM_534069.2| PREDICTED: Canis familiaris similar to coatomer protein complex, subunit beta (LOC476866), mRNA Length = 3494 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtgaatat 709 |||||| ||||||||||| |||||||||| Sbjct: 2793 gatatagtccatgatgtcgatgtgaatat 2765
>gb|AC134508.2| Homo sapiens 3 BAC RP11-447M4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 51315 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 tcttctcatccctctctttaa 216 ||||||||||||||||||||| Sbjct: 29023 tcttctcatccctctctttaa 29043
>gb|U13876.3| Caenorhabditis elegans cosmid F57B9, complete sequence Length = 39112 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cgaaatacagtatctcaatcc 40 ||||||||||||||||||||| Sbjct: 5828 cgaaatacagtatctcaatcc 5808
>emb|CR859574.1| Pongo pygmaeus mRNA; cDNA DKFZp459K154 (from clone DKFZp459K154) Length = 3295 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 616 ttgttttcccactcaaattctgcccacat 644 ||||||||||| |||||||| |||||||| Sbjct: 2704 ttgttttcccattcaaattcggcccacat 2676 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtgaatat 709 |||||| ||||||||||| |||||||||| Sbjct: 2639 gatatagtccatgatgtcgatgtgaatat 2611
>gb|BC100179.1| Xenopus laevis cDNA clone MGC:114704 IMAGE:6634061, complete cds Length = 3459 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 604 ttaactgcaaccttgttttcccactcaaattctgcccacat 644 ||||||| ||||| |||||||||||||| || |||||||| Sbjct: 2743 ttaactgtcaccttattttcccactcaaactccgcccacat 2703
>gb|BC037280.2| Homo sapiens coatomer protein complex, subunit beta, mRNA (cDNA clone MGC:33032 IMAGE:4831366), complete cds Length = 3528 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 616 ttgttttcccactcaaattctgcccacat 644 ||||||||||| |||||||| |||||||| Sbjct: 2856 ttgttttcccattcaaattcggcccacat 2828 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtgaatat 709 |||||| ||||||||||| |||||||||| Sbjct: 2791 gatatagtccatgatgtcgatgtgaatat 2763
>emb|AL096797.1|SPBC146 S.pombe chromosome II cosmid c146 Length = 33601 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 613 accttgttttcccactcaaattctgcccacatg 645 |||||||||||||| |||||||| | ||||||| Sbjct: 30642 accttgttttcccattcaaattccgtccacatg 30674
>gb|AC112219.2| Homo sapiens chromosome 3 clone RP11-433A10, complete sequence Length = 155472 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 537 tagacacttcatgtttgttga 557 ||||||||||||||||||||| Sbjct: 48287 tagacacttcatgtttgttga 48307
>emb|AL136593.1|HSM801567 Homo sapiens mRNA; cDNA DKFZp761K102 (from clone DKFZp761K102) Length = 3330 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 616 ttgttttcccactcaaattctgcccacat 644 ||||||||||| |||||||| |||||||| Sbjct: 2733 ttgttttcccattcaaattcggcccacat 2705 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtgaatat 709 |||||| ||||||||||| |||||||||| Sbjct: 2668 gatatagtccatgatgtcgatgtgaatat 2640
>gb|AC090092.9| Homo sapiens chromosome 11, clone RP11-266A24, complete sequence Length = 101116 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 tcttcctcttctcatccctct 210 ||||||||||||||||||||| Sbjct: 82774 tcttcctcttctcatccctct 82794
>ref|NM_016451.3| Homo sapiens coatomer protein complex, subunit beta (COPB), mRNA Length = 3528 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 616 ttgttttcccactcaaattctgcccacat 644 ||||||||||| |||||||| |||||||| Sbjct: 2856 ttgttttcccattcaaattcggcccacat 2828 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtgaatat 709 |||||| ||||||||||| |||||||||| Sbjct: 2791 gatatagtccatgatgtcgatgtgaatat 2763
>emb|CR605573.1| full-length cDNA clone CS0DL007YF21 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2004 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 616 ttgttttcccactcaaattctgcccacat 644 ||||||||||| |||||||| |||||||| Sbjct: 1437 ttgttttcccattcaaattcggcccacat 1409 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtgaatat 709 |||||| ||||||||||| |||||||||| Sbjct: 1372 gatatagtccatgatgtcgatgtgaatat 1344
>gb|AC148584.23| Gasterosteus aculeatus clone ch213-278g3, complete sequence Length = 169579 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 cctcttctcatccctctcttt 214 ||||||||||||||||||||| Sbjct: 41686 cctcttctcatccctctcttt 41706
>gb|AC107925.5| Homo sapiens chromosome 11, clone RP11-379A20, complete sequence Length = 170801 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 tcttcctcttctcatccctct 210 ||||||||||||||||||||| Sbjct: 7996 tcttcctcttctcatccctct 8016
>gb|AF111807.1|AF111807 Homo sapiens MSTP026 (MST026) mRNA, complete cds Length = 3265 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 616 ttgttttcccactcaaattctgcccacat 644 ||||||||||| |||||||| |||||||| Sbjct: 2668 ttgttttcccattcaaattcggcccacat 2640 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtgaatat 709 |||||| ||||||||||| |||||||||| Sbjct: 2603 gatatagtccatgatgtcgatgtgaatat 2575
>ref|XM_691860.1| PREDICTED: Danio rerio similar to Coatomer protein complex, subunit beta 1 (LOC568528), mRNA Length = 3555 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 612 aaccttgttttcccactcaaattctgcccacat 644 |||||| |||||||||||||| || |||||||| Sbjct: 2829 aaccttattttcccactcaaactcagcccacat 2797
>ref|NM_001021310.1| Schizosaccharomyces pombe 972h- coatomer subunit beta (SPBC146.14c), partial mRNA Length = 2823 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 613 accttgttttcccactcaaattctgcccacatg 645 |||||||||||||| |||||||| | ||||||| Sbjct: 2555 accttgttttcccattcaaattccgtccacatg 2523
>dbj|AB080596.1| Botryococcus braunii bCOP mRNA for coatomer subunit beta, complete cds Length = 3313 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 613 accttgttttcccactcaaattctgcccacatg 645 |||||||| ||||||||||| || ||||||||| Sbjct: 2762 accttgttctcccactcaaactcagcccacatg 2730
>gb|AC018523.9|AC018523 Homo sapiens chromosome , clone RP11-140L24, complete sequence Length = 166507 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 616 ttgttttcccactcaaattctgcccacat 644 ||||||||||| |||||||| |||||||| Sbjct: 142674 ttgttttcccattcaaattcggcccacat 142646 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtgaatat 709 |||||| ||||||||||| |||||||||| Sbjct: 142609 gatatagtccatgatgtcgatgtgaatat 142581
>ref|NM_001002013.1| Danio rerio coatomer protein complex, subunit beta 1 (copb1), mRNA Length = 3239 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 612 aaccttgttttcccactcaaattctgcccacat 644 |||||| |||||||||||||| || |||||||| Sbjct: 2665 aaccttattttcccactcaaactcagcccacat 2633
>gb|AY294010.1| Danio rerio coatomer protein complex subunit beta 1 (copb1) mRNA, complete cds Length = 3239 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 612 aaccttgttttcccactcaaattctgcccacat 644 |||||| |||||||||||||| || |||||||| Sbjct: 2665 aaccttattttcccactcaaactcagcccacat 2633
>gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, complete sequence Length = 204424 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 293 atgacacaattgcaacagatt 313 ||||||||||||||||||||| Sbjct: 73824 atgacacaattgcaacagatt 73844
>ref|NM_080781.2| Rattus norvegicus coatomer protein complex, subunit beta 1 (Copb1), mRNA Length = 3348 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtg 704 |||||| ||||||||||||||||| Sbjct: 2647 gatatagtccatgatgtcaatgtg 2624
>gb|AY648725.1| Danio rerio Opa-interacting protein 2 mRNA, complete cds Length = 987 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 atggaagggagttgggagag 122 |||||||||||||||||||| Sbjct: 98 atggaagggagttgggagag 117
>ref|NM_033370.2| Mus musculus coatomer protein complex, subunit beta 1 (Copb1), mRNA Length = 3324 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtg 704 |||||| ||||||||||||||||| Sbjct: 2624 gatatagtccatgatgtcaatgtg 2601
>gb|BC061882.1| Rattus norvegicus coatomer protein complex, subunit beta 1, mRNA (cDNA clone MGC:72331 IMAGE:5599357), complete cds Length = 3348 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtg 704 |||||| ||||||||||||||||| Sbjct: 2647 gatatagtccatgatgtcaatgtg 2624
>gb|BC030837.1| Mus musculus coatomer protein complex, subunit beta 1, mRNA (cDNA clone MGC:31018 IMAGE:4022216), complete cds Length = 3324 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtg 704 |||||| ||||||||||||||||| Sbjct: 2624 gatatagtccatgatgtcaatgtg 2601
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 atcttttgtacattataaaa 235 |||||||||||||||||||| Sbjct: 157323 atcttttgtacattataaaa 157304
>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12, complete sequence Length = 121293 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 atcttttgtacattataaaa 235 |||||||||||||||||||| Sbjct: 28118 atcttttgtacattataaaa 28099
>gb|AC161930.7| Mus musculus chromosome 7, clone RP23-157P17, complete sequence Length = 212109 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 681 gatataatccatgatgtcaatgtg 704 |||||| ||||||||||||||||| Sbjct: 116372 gatatagtccatgatgtcaatgtg 116395
>gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome 18, complete sequence Length = 209579 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 tcttcctcttctcatccctc 209 |||||||||||||||||||| Sbjct: 64584 tcttcctcttctcatccctc 64565
>ref|XM_754415.1| Ustilago maydis 521 hypothetical protein (UM03361.1) partial mRNA Length = 2949 Score = 40.1 bits (20), Expect = 9.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 349 gtaatcttgtctcccaagctgagtgcaattccttgggtcttgct 392 |||||||||||||||||||| | || || || ||||||||||| Sbjct: 2918 gtaatcttgtctcccaagctcaaggcgatcccctgggtcttgct 2875
>emb|CR753837.14| Zebrafish DNA sequence from clone DKEY-234K7 in linkage group 5, complete sequence Length = 135495 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gtacattataaaaacatctt 242 |||||||||||||||||||| Sbjct: 118337 gtacattataaaaacatctt 118318
>ref|XM_854550.1| PREDICTED: Canis familiaris similar to senataxin, transcript variant 2 (LOC480691), mRNA Length = 8571 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 643 atgttccggaaagtaacatc 662 |||||||||||||||||||| Sbjct: 7073 atgttccggaaagtaacatc 7054
>ref|XM_537811.2| PREDICTED: Canis familiaris similar to senataxin, transcript variant 1 (LOC480691), mRNA Length = 8670 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 643 atgttccggaaagtaacatc 662 |||||||||||||||||||| Sbjct: 7073 atgttccggaaagtaacatc 7054
>gb|BC048021.1| Xenopus laevis enzymatic glycosylation-regulating gene, mRNA (cDNA clone MGC:52826 IMAGE:4884583), complete cds Length = 3336 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ttttgtacattataaaaaca 238 |||||||||||||||||||| Sbjct: 3216 ttttgtacattataaaaaca 3235
>ref|XM_737168.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000048.02.0) partial mRNA Length = 1161 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 aatcttttgtacattataaaaaca 238 |||||||||||||||| ||||||| Sbjct: 324 aatcttttgtacattagaaaaaca 347
>emb|AL356414.11| Human DNA sequence from clone RP11-352D3 on chromosome 20 Contains the RPL21P2 gene for ribosomal protein L21 pseudogene 2 and a novel gene, complete sequence Length = 72540 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tgtctcccaagctgagtgca 375 |||||||||||||||||||| Sbjct: 6689 tgtctcccaagctgagtgca 6670
>emb|AL354831.18| Human DNA sequence from clone RP11-188A23 on chromosome 13 Contains a novel gene and a CpG island, complete sequence Length = 144586 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 ggcaaggaaaccacattcgc 514 |||||||||||||||||||| Sbjct: 60540 ggcaaggaaaccacattcgc 60521
>emb|BX465844.25| Zebrafish DNA sequence from clone CH211-106I3 in linkage group 10, complete sequence Length = 167771 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 atggaagggagttgggagag 122 |||||||||||||||||||| Sbjct: 2324 atggaagggagttgggagag 2343
>gb|AC027118.9| Homo sapiens chromosome 10 clone RP11-573I11, complete sequence Length = 170255 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 cttgccatcaacttgcttct 436 |||||||||||||||||||| Sbjct: 75604 cttgccatcaacttgcttct 75623
>dbj|AK135168.1| Mus musculus 12 days embryo female ovary cDNA, RIKEN full-length enriched library, clone:6620401N12 product:coatomer protein complex, subunit beta 1, full insert sequence Length = 3344 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtg 704 |||||| ||||||||||||||||| Sbjct: 2656 gatatagtccatgatgtcaatgtg 2633
>gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, complete sequence Length = 194729 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcacatctattcttacacca 75 |||||||||||||||||||| Sbjct: 114772 tcacatctattcttacacca 114791
>gb|AC068207.6| Homo sapiens chromosome 8, clone RP11-26K8, complete sequence Length = 168843 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 cccttctgcttgagggtaat 353 |||||||||||||||||||| Sbjct: 29210 cccttctgcttgagggtaat 29229
>ref|XM_697090.1| PREDICTED: Danio rerio hypothetical protein LOC554904 (LOC554904), mRNA Length = 5959 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 caaggaaaccacattcgcca 516 |||||||||||||||||||| Sbjct: 4973 caaggaaaccacattcgcca 4992
>dbj|AK172214.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830106G17 product:coatomer protein complex, subunit beta 1, full insert sequence Length = 3275 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtg 704 |||||| ||||||||||||||||| Sbjct: 2626 gatatagtccatgatgtcaatgtg 2603
>gb|AF231925.1|AF231925 Mus musculus COPI coatomer complex, beta subunit (Copb) mRNA, complete cds Length = 3246 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtg 704 |||||| ||||||||||||||||| Sbjct: 2563 gatatagtccatgatgtcaatgtg 2540
>ref|NM_001002865.1| Danio rerio exosome component 8 (exosc8), mRNA Length = 987 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 atggaagggagttgggagag 122 |||||||||||||||||||| Sbjct: 98 atggaagggagttgggagag 117
>gb|BC095236.1| Danio rerio exosome component 8, mRNA (cDNA clone MGC:110381 IMAGE:7410517), complete cds Length = 968 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 atggaagggagttgggagag 122 |||||||||||||||||||| Sbjct: 81 atggaagggagttgggagag 100
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 atcttttgtacattataaaa 235 |||||||||||||||||||| Sbjct: 17897369 atcttttgtacattataaaa 17897350
>gb|AC106892.3| Homo sapiens BAC clone RP11-55L3 from 4, complete sequence Length = 164051 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 tcttcctcttctcatccctc 209 |||||||||||||||||||| Sbjct: 129969 tcttcctcttctcatccctc 129950
>gb|AC068284.5| Homo sapiens BAC clone RP11-473K18 from 2, complete sequence Length = 110512 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 acaaacttcacatctattct 68 |||||||||||||||||||| Sbjct: 22462 acaaacttcacatctattct 22481
>gb|AF381386.1| Monolopia congdonii chloroplast rpl20 gene, and rpl20-rps12 spacer, partial sequence Length = 654 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 575 agaattccttctcatcttgaatta 598 |||||| ||||||||||||||||| Sbjct: 559 agaattgcttctcatcttgaatta 582
>gb|AC006030.2| Homo sapiens BAC clone RP11-1P9 from 2, complete sequence Length = 89352 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ctcccttctgcttgagggta 351 |||||||||||||||||||| Sbjct: 72452 ctcccttctgcttgagggta 72433
>emb|BX571779.6| Mouse DNA sequence from clone RP23-415G1 on chromosome X, complete sequence Length = 97756 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 aatcttttgtacattataaa 234 |||||||||||||||||||| Sbjct: 6181 aatcttttgtacattataaa 6162
>emb|BX293564.5| Zebrafish DNA sequence from clone DKEYP-7F8 in linkage group 20, complete sequence Length = 145495 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 caaggaaaccacattcgcca 516 |||||||||||||||||||| Sbjct: 98092 caaggaaaccacattcgcca 98073
>emb|X57228.1|RNBCOP Rat mRNA for beta COP Length = 3073 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 681 gatataatccatgatgtcaatgtg 704 |||||| ||||||||||||||||| Sbjct: 2578 gatatagtccatgatgtcaatgtg 2555
>emb|BX322606.6| Zebrafish DNA sequence from clone DKEY-40F12, complete sequence Length = 240928 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gtacattataaaaacatctt 242 |||||||||||||||||||| Sbjct: 72225 gtacattataaaaacatctt 72206
>dbj|AP006305.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-53M8, complete sequence Length = 185588 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 cccttctgcttgagggtaat 353 |||||||||||||||||||| Sbjct: 134566 cccttctgcttgagggtaat 134585
>dbj|AP003397.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-1007G5, complete sequences Length = 184643 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 catcttgaattactgtatta 606 |||||||||||||||||||| Sbjct: 46451 catcttgaattactgtatta 46432
>dbj|AP006212.1| Homo sapiens genomic DNA, chromosome 20, clone:CTB-271B20, complete sequence Length = 129610 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tgtctcccaagctgagtgca 375 |||||||||||||||||||| Sbjct: 44905 tgtctcccaagctgagtgca 44886
>emb|AL132857.4|CNS01DTS Human chromosome 14 DNA sequence BAC R-896J10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 166862 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 tttgtacattataaaaacatcttt 243 ||||||||||||||||||| |||| Sbjct: 106494 tttgtacattataaaaacaacttt 106517
>dbj|AP000072.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 8/19, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 cccttctgcttgagggtaat 353 |||||||||||||||||||| Sbjct: 911 cccttctgcttgagggtaat 892
>emb|AL732560.11| Mouse DNA sequence from clone RP24-209P15 on chromosome 2, complete sequence Length = 104663 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 tttgttgacttgataacatg 569 |||||||||||||||||||| Sbjct: 74561 tttgttgacttgataacatg 74580 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,686,558 Number of Sequences: 3902068 Number of extensions: 6686558 Number of successful extensions: 147058 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 146675 Number of HSP's gapped (non-prelim): 381 length of query: 709 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 686 effective length of database: 17,143,297,704 effective search space: 11760302224944 effective search space used: 11760302224944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
