ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39l22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome... 98 5e-17
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 98 5e-17
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 98 5e-17
4dbj|AK073243.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 5e-17
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 98 5e-17
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 98 5e-17
7emb|BX000500.4|CNS08CDQ Oryza sativa chromosome 12, . BAC OSJNBb... 98 5e-17
8tpg|BK005049.1| TPA: TPA_inf: Oryza sativa (indica cultivar-grou... 82 3e-12
9gb|AY107648.1| Zea mays PCO091217 mRNA sequence 80 1e-11
10ref|NM_001003955.2| Mus musculus RAB11 family interacting protei... 46 0.17
11gb|AC155728.13| Mus musculus 6 BAC RP24-162H1 (Roswell Park Canc... 46 0.17
12ref|XM_992559.1| PREDICTED: Mus musculus RAB11 family interactin... 46 0.17
13emb|CR354750.1| Mus musculus chromosome 6, clone tr151 strain 12... 46 0.17
14dbj|AK154922.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 46 0.17
15dbj|AK129230.1| Mus musculus mRNA for mKIAA0857 protein 46 0.17
16gb|AC153605.2| Mus musculus 6 BAC RP23-346H23 (Roswell Park Canc... 46 0.17
17ref|XM_788933.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.69
18gb|AC008817.8| Homo sapiens chromosome 5 clone CTD-2122P11, comp... 44 0.69
19gb|AC012075.10| Homo sapiens BAC clone RP11-492P1 from 2, comple... 44 0.69
20gb|AC154756.2| Mus musculus BAC clone RP23-114J15 from 13, compl... 44 0.69
21gb|AC134611.4| Mus musculus BAC clone RP23-98D8 from chromosome ... 42 2.7
22emb|BX936312.12| Zebrafish DNA sequence from clone DKEY-204O5 in... 42 2.7
23emb|CR376741.14| Zebrafish DNA sequence from clone DKEY-114B16 i... 42 2.7
24emb|AL928799.13| Zebrafish DNA sequence from clone CH211-15B10 i... 42 2.7
25emb|CR381635.11| Zebrafish DNA sequence from clone DKEY-171C9 in... 42 2.7
26emb|BX321873.12| Zebrafish DNA sequence from clone DKEY-151G22 i... 42 2.7
27emb|BX855610.5| Zebrafish DNA sequence from clone DKEY-121J17 in... 42 2.7
28emb|BX470182.12| Zebrafish DNA sequence from clone CH211-195P4 i... 42 2.7
29emb|BX571803.23| Zebrafish DNA sequence from clone DKEY-273G3 in... 42 2.7
30emb|BX901892.22| Zebrafish DNA sequence from clone CH211-218H8 i... 42 2.7
31emb|BX663511.8| Zebrafish DNA sequence from clone RP71-20D11 in ... 42 2.7
32emb|BX324115.8| Zebrafish DNA sequence from clone DKEYP-70E6, co... 42 2.7
33emb|BX284638.16| Zebrafish DNA sequence from clone CH211-274J7 i... 42 2.7
34emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14,... 42 2.7
35emb|BX248389.8| Zebrafish DNA sequence from clone CH211-236C4 in... 42 2.7
36emb|BX323596.9| Zebrafish DNA sequence from clone DKEY-210G19 in... 42 2.7
37gb|AC016735.10| Homo sapiens BAC clone RP11-391M15 from 2, compl... 42 2.7
38emb|AL935276.16| Zebrafish DNA sequence from clone CH211-273J2, ... 42 2.7
39emb|AL844187.13| Zebrafish DNA sequence from clone DKEY-221D18 i... 42 2.7
40emb|BX088699.4| Zebrafish DNA sequence from clone CH211-192K19 i... 42 2.7
41emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 i... 42 2.7
42emb|CT573036.11| Mouse DNA sequence from clone RP24-376I11 on ch... 42 2.7
43emb|BX914195.11| Zebrafish DNA sequence from clone CH211-170L6 i... 42 2.7
44emb|AL954741.9| Zebrafish DNA sequence from clone CH211-255F4 in... 42 2.7
45emb|AL845420.7| Zebrafish DNA sequence from clone CH211-203K16 i... 42 2.7
46emb|BX957271.6| Zebrafish DNA sequence from clone CH211-130N22 i... 42 2.7
47emb|BX510308.15| Zebrafish DNA sequence from clone DKEY-108H8 in... 42 2.7
48emb|CR388363.15| Zebrafish DNA sequence from clone DKEY-254E13 i... 42 2.7
49emb|CR354607.12| Zebrafish DNA sequence from clone CH211-278G15 ... 42 2.7
50emb|BX927330.9| Zebrafish DNA sequence from clone DKEY-43B14 in ... 42 2.7
51emb|AL954310.6| Zebrafish DNA sequence from clone CH211-255G12, ... 42 2.7
52gb|AC149052.3| Mus musculus BAC clone RP24-548O1 from 7, complet... 42 2.7
53emb|AL807818.14| Zebrafish DNA sequence from clone CH211-225H24,... 42 2.7
54emb|AL928872.7| Zebrafish DNA sequence from clone DKEYP-59A2, co... 42 2.7 
>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0004B05, complete sequence
          Length = 121223

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 64/69 (92%)
 Strand = Plus / Plus

                                                                         
Query: 334   catcacaagaagtggaagtactcgatgcatctcgactggccgatcggcagcagtgtcctc 393
             ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||| |||||||
Sbjct: 37186 catcacaagaaatggaaatactcgatgcatcttgactgaccgatcggcagcaatgtcctc 37245

                      
Query: 394   gacagagca 402
             |||||||||
Sbjct: 37246 gacagagca 37254



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                         
Query: 695   tgttgcagctgtgatggttgaagtaagtgactgtgaacaatggtgggtcgctcatgtcct 754
             |||||||| |||| ||||||||||||||||||| |||||||||||| ||  |  ||||||
Sbjct: 37547 tgttgcaggtgtggtggttgaagtaagtgactgagaacaatggtggatcattagtgtcct 37606

                          
Query: 755   tctgctggacttg 767
             |||||||||||||
Sbjct: 37607 tctgctggacttg 37619



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 151   agttctttacatcatccaagcacacaaatctggctcgaatctgaatgcaaag 202
             ||||||||||||||| |||||||| |||||||||| ||||||  ||||||||
Sbjct: 36995 agttctttacatcattcaagcacaaaaatctggcttgaatctacatgcaaag 37046
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 64/69 (92%)
 Strand = Plus / Plus

                                                                          
Query: 334    catcacaagaagtggaagtactcgatgcatctcgactggccgatcggcagcagtgtcctc 393
              ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||| |||||||
Sbjct: 801798 catcacaagaaatggaaatactcgatgcatcttgactgaccgatcggcagcaatgtcctc 801857

                       
Query: 394    gacagagca 402
              |||||||||
Sbjct: 801858 gacagagca 801866



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                          
Query: 695    tgttgcagctgtgatggttgaagtaagtgactgtgaacaatggtgggtcgctcatgtcct 754
              |||||||| |||| ||||||||||||||||||| |||||||||||| ||  |  ||||||
Sbjct: 802159 tgttgcaggtgtggtggttgaagtaagtgactgagaacaatggtggatcattagtgtcct 802218

                           
Query: 755    tctgctggacttg 767
              |||||||||||||
Sbjct: 802219 tctgctggacttg 802231



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                  
Query: 151    agttctttacatcatccaagcacacaaatctggctcgaatctgaatgcaaag 202
              ||||||||||||||| |||||| | |||||||||| ||||||  ||||||||
Sbjct: 801609 agttctttacatcattcaagcaaaaaaatctggcttgaatctacatgcaaag 801660
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 64/69 (92%)
 Strand = Plus / Plus

                                                                          
Query: 334    catcacaagaagtggaagtactcgatgcatctcgactggccgatcggcagcagtgtcctc 393
              ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||| |||||||
Sbjct: 758893 catcacaagaaatggaaatactcgatgcatcttgactgaccgatcggcagcaatgtcctc 758952

                       
Query: 394    gacagagca 402
              |||||||||
Sbjct: 758953 gacagagca 758961



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                          
Query: 695    tgttgcagctgtgatggttgaagtaagtgactgtgaacaatggtgggtcgctcatgtcct 754
              |||||||| |||| ||||||||||||||||||| |||||||||||| ||  |  ||||||
Sbjct: 759254 tgttgcaggtgtggtggttgaagtaagtgactgagaacaatggtggatcattagtgtcct 759313

                           
Query: 755    tctgctggacttg 767
              |||||||||||||
Sbjct: 759314 tctgctggacttg 759326



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                  
Query: 151    agttctttacatcatccaagcacacaaatctggctcgaatctgaatgcaaag 202
              ||||||||||||||| |||||||| |||||||||| ||||||  ||||||||
Sbjct: 758702 agttctttacatcattcaagcacaaaaatctggcttgaatctacatgcaaag 758753
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>dbj|AK073243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005D11, full
           insert sequence
          Length = 1065

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                       
Query: 334 catcacaagaagtggaagtactcgatgcatctcgactggccgatcggcagcagtgtcctc 393
           ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||| |||||||
Sbjct: 764 catcacaagaaatggaaatactcgatgcatcttgactgaccgatcggcagcaatgtcctc 705

                    
Query: 394 gacagagca 402
           |||||||||
Sbjct: 704 gacagagca 696



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                       
Query: 695 tgttgcagctgtgatggttgaagtaagtgactgtgaacaatggtgggtcgctcatgtcct 754
           |||||||| |||| ||||||||||||||||||| |||||||||||| ||  |  ||||||
Sbjct: 403 tgttgcaggtgtggtggttgaagtaagtgactgagaacaatggtggatcattagtgtcct 344

                        
Query: 755 tctgctggacttg 767
           |||||||||||||
Sbjct: 343 tctgctggacttg 331



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 151 agttctttacatcatccaagcacacaaatctggctcgaatctgaatgcaaag 202
           ||||||||||||||| |||||||| |||||||||| ||||||  ||||||||
Sbjct: 955 agttctttacatcattcaagcacaaaaatctggcttgaatctacatgcaaag 904
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 64/69 (92%)
 Strand = Plus / Plus

                                                                          
Query: 334    catcacaagaagtggaagtactcgatgcatctcgactggccgatcggcagcagtgtcctc 393
              ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||| |||||||
Sbjct: 758895 catcacaagaaatggaaatactcgatgcatcttgactgaccgatcggcagcaatgtcctc 758954

                       
Query: 394    gacagagca 402
              |||||||||
Sbjct: 758955 gacagagca 758963



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                          
Query: 695    tgttgcagctgtgatggttgaagtaagtgactgtgaacaatggtgggtcgctcatgtcct 754
              |||||||| |||| ||||||||||||||||||| |||||||||||| ||  |  ||||||
Sbjct: 759256 tgttgcaggtgtggtggttgaagtaagtgactgagaacaatggtggatcattagtgtcct 759315

                           
Query: 755    tctgctggacttg 767
              |||||||||||||
Sbjct: 759316 tctgctggacttg 759328



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                  
Query: 151    agttctttacatcatccaagcacacaaatctggctcgaatctgaatgcaaag 202
              ||||||||||||||| |||||||| |||||||||| ||||||  ||||||||
Sbjct: 758704 agttctttacatcattcaagcacaaaaatctggcttgaatctacatgcaaag 758755
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 64/69 (92%)
 Strand = Plus / Plus

                                                                          
Query: 334    catcacaagaagtggaagtactcgatgcatctcgactggccgatcggcagcagtgtcctc 393
              ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||| |||||||
Sbjct: 801798 catcacaagaaatggaaatactcgatgcatcttgactgaccgatcggcagcaatgtcctc 801857

                       
Query: 394    gacagagca 402
              |||||||||
Sbjct: 801858 gacagagca 801866



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                          
Query: 695    tgttgcagctgtgatggttgaagtaagtgactgtgaacaatggtgggtcgctcatgtcct 754
              |||||||| |||| ||||||||||||||||||| |||||||||||| ||  |  ||||||
Sbjct: 802159 tgttgcaggtgtggtggttgaagtaagtgactgagaacaatggtggatcattagtgtcct 802218

                           
Query: 755    tctgctggacttg 767
              |||||||||||||
Sbjct: 802219 tctgctggacttg 802231



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                  
Query: 151    agttctttacatcatccaagcacacaaatctggctcgaatctgaatgcaaag 202
              ||||||||||||||| |||||| | |||||||||| ||||||  ||||||||
Sbjct: 801609 agttctttacatcattcaagcaaaaaaatctggcttgaatctacatgcaaag 801660
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>emb|BX000500.4|CNS08CDQ Oryza sativa chromosome 12, . BAC OSJNBb0027B07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 79383

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                         
Query: 334   catcacaagaagtggaagtactcgatgcatctcgactggccgatcggcagcagtgtcctc 393
             ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||| |||||||
Sbjct: 66126 catcacaagaaatggaaatactcgatgcatcttgactgaccgatcggcagcaatgtcctc 66067

                      
Query: 394   gacagagca 402
             |||||||||
Sbjct: 66066 gacagagca 66058



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                         
Query: 695   tgttgcagctgtgatggttgaagtaagtgactgtgaacaatggtgggtcgctcatgtcct 754
             |||||||| |||| ||||||||||||||||||| |||||||||||| ||  |  ||||||
Sbjct: 65765 tgttgcaggtgtggtggttgaagtaagtgactgagaacaatggtggatcattagtgtcct 65706

                          
Query: 755   tctgctggacttg 767
             |||||||||||||
Sbjct: 65705 tctgctggacttg 65693



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                 
Query: 151   agttctttacatcatccaagcacacaaatctggctcgaatctgaatgcaaag 202
             ||||||||||||||| |||||| | |||||||||| ||||||  ||||||||
Sbjct: 66315 agttctttacatcattcaagcaaaaaaatctggcttgaatctacatgcaaag 66264
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>tpg|BK005049.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription
            factor 46 (WRKY46) gene, partial cds
          Length = 2929

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                        
Query: 695  tgttgcagctgtgatggttgaagtaagtgactgtgaacaatggtgggtcgctcatgtcct 754
            |||||||| |||| ||||||||||||||||||| |||||||||||| ||  |  ||||||
Sbjct: 2913 tgttgcaggtgtggtggttgaagtaagtgactgagaacaatggtggatcattagtgtcct 2854

                         
Query: 755  tctgctggacttg 767
            |||||||||||||
Sbjct: 2853 tctgctggacttg 2841
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>gb|AY107648.1| Zea mays PCO091217 mRNA sequence
          Length = 1343

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                       
Query: 334 catcacaagaagtggaagtactcgatgcatctcgactggccgatcggcagcagtgtcctc 393
           ||||||||||| ||||||||||||||||| || |||||||||||||| ||||| ||||| 
Sbjct: 770 catcacaagaaatggaagtactcgatgcacctggactggccgatcggtagcagcgtcctg 711

                   
Query: 394 gacagagc 401
           ||| ||||
Sbjct: 710 gacggagc 703



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                       
Query: 698 tgcagctgtgatggttgaagtaagtgactgtgaacaatggtgggtcgctcatgtccttct 757
           ||||| |||| ||||||||||||||||| | ||||| ||| ||||||||  |||||||||
Sbjct: 394 tgcaggtgtgctggttgaagtaagtgacggagaacagtggcgggtcgctgctgtccttct 335

                              
Query: 758 gctggacttgttttgtcgc 776
           |||| ||||| || |||||
Sbjct: 334 gctgcacttgcttcgtcgc 316
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>ref|NM_001003955.2| Mus musculus RAB11 family interacting protein 5 (class I)
            (Rab11fip5), transcript variant 1, mRNA
          Length = 6156

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 214  acaatggtggcagcagcggcagt 236
            |||||||||||||||||||||||
Sbjct: 1815 acaatggtggcagcagcggcagt 1793
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>gb|AC155728.13| Mus musculus 6 BAC RP24-162H1 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 176377

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 214   acaatggtggcagcagcggcagt 236
             |||||||||||||||||||||||
Sbjct: 35860 acaatggtggcagcagcggcagt 35882
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>ref|XM_992559.1| PREDICTED: Mus musculus RAB11 family interacting protein 5 (class I)
            (Rab11fip5), mRNA
          Length = 6019

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 214  acaatggtggcagcagcggcagt 236
            |||||||||||||||||||||||
Sbjct: 1739 acaatggtggcagcagcggcagt 1717
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>emb|CR354750.1| Mus musculus chromosome 6, clone tr151 strain 129/Sv, complete sequence
          Length = 167508

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 214   acaatggtggcagcagcggcagt 236
             |||||||||||||||||||||||
Sbjct: 24399 acaatggtggcagcagcggcagt 24421
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>dbj|AK154922.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630111H10
            product:Rab11 interacting protein Rip11 homolog [Mus
            musculus], full insert sequence
          Length = 6104

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 214  acaatggtggcagcagcggcagt 236
            |||||||||||||||||||||||
Sbjct: 1799 acaatggtggcagcagcggcagt 1777
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>dbj|AK129230.1| Mus musculus mRNA for mKIAA0857 protein
          Length = 6119

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 214  acaatggtggcagcagcggcagt 236
            |||||||||||||||||||||||
Sbjct: 1815 acaatggtggcagcagcggcagt 1793
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>gb|AC153605.2| Mus musculus 6 BAC RP23-346H23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 229744

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 214    acaatggtggcagcagcggcagt 236
              |||||||||||||||||||||||
Sbjct: 225587 acaatggtggcagcagcggcagt 225609
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>ref|XM_788933.1| PREDICTED: Strongylocentrotus purpuratus similar to breast
           carcinoma amplified sequence 3 (LOC589289), partial mRNA
          Length = 469

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 399 agcatggccgctagcaccgcca 420
           ||||||||||||||||||||||
Sbjct: 156 agcatggccgctagcaccgcca 177
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>gb|AC008817.8| Homo sapiens chromosome 5 clone CTD-2122P11, complete sequence
          Length = 186185

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 711   gttgaagtaagtgactgtgaac 732
             ||||||||||||||||||||||
Sbjct: 54267 gttgaagtaagtgactgtgaac 54246
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>gb|AC012075.10| Homo sapiens BAC clone RP11-492P1 from 2, complete sequence
          Length = 185437

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 91    aaacattacctttcttttgcaa 112
             ||||||||||||||||||||||
Sbjct: 88907 aaacattacctttcttttgcaa 88886
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>gb|AC154756.2| Mus musculus BAC clone RP23-114J15 from 13, complete sequence
          Length = 189515

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 132    aataaataaacttcagtctagt 153
              ||||||||||||||||||||||
Sbjct: 174919 aataaataaacttcagtctagt 174898
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>gb|AC134611.4| Mus musculus BAC clone RP23-98D8 from chromosome 15, complete sequence
          Length = 198894

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     ctgcataaaccacacagtatg 21
             |||||||||||||||||||||
Sbjct: 89170 ctgcataaaccacacagtatg 89150
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>emb|BX936312.12| Zebrafish DNA sequence from clone DKEY-204O5 in linkage group 7,
             complete sequence
          Length = 158510

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 84116 ataaataaataaacttcagtc 84136
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>emb|CR376741.14| Zebrafish DNA sequence from clone DKEY-114B16 in linkage group 8,
             complete sequence
          Length = 166048

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 25535 ataaataaataaacttcagtc 25555



 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 20012 ataaataaataaacttcagtc 20032
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>emb|AL928799.13| Zebrafish DNA sequence from clone CH211-15B10 in linkage group 7,
            complete sequence
          Length = 89993

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 129  ataaataaataaacttcagtc 149
            |||||||||||||||||||||
Sbjct: 3462 ataaataaataaacttcagtc 3442



 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 129  ataaataaataaacttcagtc 149
            |||||||||||||||||||||
Sbjct: 1420 ataaataaataaacttcagtc 1400
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>emb|CR381635.11| Zebrafish DNA sequence from clone DKEY-171C9 in linkage group 7, complete
              sequence
          Length = 173058

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 129    ataaataaataaacttcagtc 149
              |||||||||||||||||||||
Sbjct: 172478 ataaataaataaacttcagtc 172458
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>emb|BX321873.12| Zebrafish DNA sequence from clone DKEY-151G22 in linkage group 20
              Contains four novel genes and three CpG islands, complete
              sequence
          Length = 155649

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 129    ataaataaataaacttcagtc 149
              |||||||||||||||||||||
Sbjct: 138624 ataaataaataaacttcagtc 138644
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>emb|BX855610.5| Zebrafish DNA sequence from clone DKEY-121J17 in linkage group 3 Contains
              the gene for a novel protein similar to vertebrate protein
              kinase, cGMP-dependent, type I (PRKG1), the gene for a
              novel protein similar to vertebrate potassium channel,
              subfamily K, member 2 (KCNK2), the gene for a novel protein
              similar to human and mouse squamous cell carcinoma antigen
              recognized by T cells 2 (SART2), the gene for a novel
              protein similar to vertebrate SET and MYND domain
              containing 2 (SYMD2), a novel gene and six CpG islands,
              complete sequence
          Length = 139210

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 129    ataaataaataaacttcagtc 149
              |||||||||||||||||||||
Sbjct: 129475 ataaataaataaacttcagtc 129455
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>emb|BX470182.12| Zebrafish DNA sequence from clone CH211-195P4 in linkage group 16,
             complete sequence
          Length = 199742

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 87465 ataaataaataaacttcagtc 87445
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>emb|BX571803.23| Zebrafish DNA sequence from clone DKEY-273G3 in linkage group 9, complete
              sequence
          Length = 241708

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 129    ataaataaataaacttcagtc 149
              |||||||||||||||||||||
Sbjct: 104325 ataaataaataaacttcagtc 104345
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>emb|BX901892.22| Zebrafish DNA sequence from clone CH211-218H8 in linkage group 5,
              complete sequence
          Length = 137237

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 129    ataaataaataaacttcagtc 149
              |||||||||||||||||||||
Sbjct: 106938 ataaataaataaacttcagtc 106918
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>emb|BX663511.8| Zebrafish DNA sequence from clone RP71-20D11 in linkage group 8,
             complete sequence
          Length = 78433

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 13707 ataaataaataaacttcagtc 13687



 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 129  ataaataaataaacttcagtc 149
            |||||||||||||||||||||
Sbjct: 8183 ataaataaataaacttcagtc 8163
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>emb|BX324115.8| Zebrafish DNA sequence from clone DKEYP-70E6, complete sequence
          Length = 202547

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 73264 ataaataaataaacttcagtc 73284
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>emb|BX284638.16| Zebrafish DNA sequence from clone CH211-274J7 in linkage group 3,
              complete sequence
          Length = 160026

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 129    ataaataaataaacttcagtc 149
              |||||||||||||||||||||
Sbjct: 104559 ataaataaataaacttcagtc 104539
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>emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14, complete sequence
          Length = 151789

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 59826 ataaataaataaacttcagtc 59846
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>emb|BX248389.8| Zebrafish DNA sequence from clone CH211-236C4 in linkage group 7,
              complete sequence
          Length = 134182

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 129    ataaataaataaacttcagtc 149
              |||||||||||||||||||||
Sbjct: 121844 ataaataaataaacttcagtc 121864
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>emb|BX323596.9| Zebrafish DNA sequence from clone DKEY-210G19 in linkage group 5,
              complete sequence
          Length = 251428

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 129    ataaataaataaacttcagtc 149
              |||||||||||||||||||||
Sbjct: 156976 ataaataaataaacttcagtc 156956
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>gb|AC016735.10| Homo sapiens BAC clone RP11-391M15 from 2, complete sequence
          Length = 182730

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 76    ctacttccaaatgggaaacat 96
             |||||||||||||||||||||
Sbjct: 51222 ctacttccaaatgggaaacat 51202
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>emb|AL935276.16| Zebrafish DNA sequence from clone CH211-273J2, complete sequence
          Length = 164481

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 27058 ataaataaataaacttcagtc 27078
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>emb|AL844187.13| Zebrafish DNA sequence from clone DKEY-221D18 in linkage group 16,
             complete sequence
          Length = 168637

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 37405 ataaataaataaacttcagtc 37425
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>emb|BX088699.4| Zebrafish DNA sequence from clone CH211-192K19 in linkage group 9,
             complete sequence
          Length = 112979

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 83649 ataaataaataaacttcagtc 83669



 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 78118 ataaataaataaacttcagtc 78138
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>emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 in linkage group 13,
              complete sequence
          Length = 165993

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 129    ataaataaataaacttcagtc 149
              |||||||||||||||||||||
Sbjct: 151824 ataaataaataaacttcagtc 151844
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>emb|CT573036.11| Mouse DNA sequence from clone RP24-376I11 on chromosome 9, complete
             sequence
          Length = 136639

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 89291 ataaataaataaacttcagtc 89271
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>emb|BX914195.11| Zebrafish DNA sequence from clone CH211-170L6 in linkage group 18,
              complete sequence
          Length = 156691

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 129    ataaataaataaacttcagtc 149
              |||||||||||||||||||||
Sbjct: 141586 ataaataaataaacttcagtc 141606
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>emb|AL954741.9| Zebrafish DNA sequence from clone CH211-255F4 in linkage group 22,
             complete sequence
          Length = 166560

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 90886 ataaataaataaacttcagtc 90906
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>emb|AL845420.7| Zebrafish DNA sequence from clone CH211-203K16 in linkage group 20,
             complete sequence
          Length = 145933

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 72390 ataaataaataaacttcagtc 72370
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>emb|BX957271.6| Zebrafish DNA sequence from clone CH211-130N22 in linkage group 10,
             complete sequence
          Length = 161165

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 43465 ataaataaataaacttcagtc 43485



 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 37933 ataaataaataaacttcagtc 37953
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>emb|BX510308.15| Zebrafish DNA sequence from clone DKEY-108H8 in linkage group 3,
             complete sequence
          Length = 232247

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 68378 ataaataaataaacttcagtc 68358
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>emb|CR388363.15| Zebrafish DNA sequence from clone DKEY-254E13 in linkage group 14,
             complete sequence
          Length = 176437

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 50197 ataaataaataaacttcagtc 50217
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>emb|CR354607.12| Zebrafish DNA sequence from clone CH211-278G15 in linkage group 24,
             complete sequence
          Length = 180632

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 81816 ataaataaataaacttcagtc 81836



 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 76284 ataaataaataaacttcagtc 76304
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>emb|BX927330.9| Zebrafish DNA sequence from clone DKEY-43B14 in linkage group 2, complete
              sequence
          Length = 203149

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 129    ataaataaataaacttcagtc 149
              |||||||||||||||||||||
Sbjct: 199810 ataaataaataaacttcagtc 199830
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>emb|AL954310.6| Zebrafish DNA sequence from clone CH211-255G12, complete sequence
          Length = 156407

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 49876 ataaataaataaacttcagtc 49896
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>gb|AC149052.3| Mus musculus BAC clone RP24-548O1 from 7, complete sequence
          Length = 209182

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 94     cattacctttcttttgcaagg 114
              |||||||||||||||||||||
Sbjct: 147252 cattacctttcttttgcaagg 147272
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>emb|AL807818.14| Zebrafish DNA sequence from clone CH211-225H24, complete sequence
          Length = 194425

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 46735 ataaataaataaacttcagtc 46715
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>emb|AL928872.7| Zebrafish DNA sequence from clone DKEYP-59A2, complete sequence
          Length = 200760

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 44123 ataaataaataaacttcagtc 44143



 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ataaataaataaacttcagtc 149
             |||||||||||||||||||||
Sbjct: 38591 ataaataaataaacttcagtc 38611


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,850,905
Number of Sequences: 3902068
Number of extensions: 7850905
Number of successful extensions: 169150
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 168789
Number of HSP's gapped (non-prelim): 353
length of query: 779
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 756
effective length of database: 17,143,297,704
effective search space: 12960333064224
effective search space used: 12960333064224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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