| Clone Name | rbags39l21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC003999.2| Homo sapiens PAC clone RP5-1139P1 from 7, complete sequence Length = 133457 Score = 38.2 bits (19), Expect = 5.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 61 aaaaaccacataaatnatgaag 82 ||||||||||||||| |||||| Sbjct: 10571 aaaaaccacataaataatgaag 10592
>ref|XM_644922.1| Entamoeba histolytica HM-1:IMSS Rap/Ran GTPase activating protein (252.t00012) partial mRNA Length = 4173 Score = 38.2 bits (19), Expect = 5.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 taatgaagctttgtctaaa 62 ||||||||||||||||||| Sbjct: 4029 taatgaagctttgtctaaa 4011
>emb|AL590396.13| Human DNA sequence from clone RP11-193H5 on chromosome 1 Contains the 3' end of a novel gene (LOC401987), a actin pseudogene, a cytochrome b (MTCYB) pseudogene, a NADH dehydrogenase 6 (MTND6) pseudogene and a NADH dehydrogenase 5 (MTND5) pseudogene, complete sequence Length = 122108 Score = 38.2 bits (19), Expect = 5.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 aatgaagctttgtctaaaa 63 ||||||||||||||||||| Sbjct: 66230 aatgaagctttgtctaaaa 66248
>emb|AL023859.1|SPBC19C7 S.pombe chromosome II cosmid c19C7 Length = 34804 Score = 38.2 bits (19), Expect = 5.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 aatgaagctttgtctaaaa 63 ||||||||||||||||||| Sbjct: 9894 aatgaagctttgtctaaaa 9912
>emb|BX649488.9| Zebrafish DNA sequence from clone DKEY-21O6 in linkage group 22, complete sequence Length = 183230 Score = 38.2 bits (19), Expect = 5.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 45 aatgaagctttgtctaaaa 63 ||||||||||||||||||| Sbjct: 97872 aatgaagctttgtctaaaa 97854
>ref|NM_001022079.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC19C7.03), partial mRNA Length = 5079 Score = 38.2 bits (19), Expect = 5.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 aatgaagctttgtctaaaa 63 ||||||||||||||||||| Sbjct: 2683 aatgaagctttgtctaaaa 2701
>gb|AC026364.36| Homo sapiens 12 BAC RP11-183N5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 40011 Score = 38.2 bits (19), Expect = 5.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 tgaagctttgtctaaaaaa 65 ||||||||||||||||||| Sbjct: 22096 tgaagctttgtctaaaaaa 22114
>emb|AL928771.6| Mouse DNA sequence from clone RP23-45J15 on chromosome 4, complete sequence Length = 133159 Score = 38.2 bits (19), Expect = 5.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 60 aaaaaaccacataaatnatgaa 81 |||||||||||||||| ||||| Sbjct: 94696 aaaaaaccacataaatcatgaa 94675
>emb|CR361552.19| Zebrafish DNA sequence from clone CH211-239J15 in linkage group 22, complete sequence Length = 166346 Score = 38.2 bits (19), Expect = 5.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 aatgaagctttgtctaaaa 63 ||||||||||||||||||| Sbjct: 156014 aatgaagctttgtctaaaa 156032
>gb|M24942.1|YSPCYR1A Yeast (S.pombe) adenylate cyclase (CYR1) gene, complete cds Length = 5400 Score = 38.2 bits (19), Expect = 5.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 aatgaagctttgtctaaaa 63 ||||||||||||||||||| Sbjct: 2883 aatgaagctttgtctaaaa 2901
>gb|M26699.1|YSPADC Yeast (S.pombe) cyr1 gene encoding adenylyl cyclase, complete cds Length = 6885 Score = 38.2 bits (19), Expect = 5.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 aatgaagctttgtctaaaa 63 ||||||||||||||||||| Sbjct: 4284 aatgaagctttgtctaaaa 4302 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 574,090 Number of Sequences: 3902068 Number of extensions: 574090 Number of successful extensions: 35077 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 35064 Number of HSP's gapped (non-prelim): 13 length of query: 114 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 93 effective length of database: 17,151,101,840 effective search space: 1595052471120 effective search space used: 1595052471120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)