ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags39l09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X82937.1|HVRNAJIP H.vulgare mRNA for jasmonate induced protein Length = 1334 Score = 387 bits (195), Expect = e-104 Identities = 396/463 (85%) Strand = Plus / Minus Query: 223 cgacttttcccaaatcttcaaatgagtaagtcaccatggggtttccatgtccacttcccg 282 |||||||||||||| ||||||||||||||||||||| | ||||| ||||| | ||| Sbjct: 753 cgacttttcccaaagcttcaaatgagtaagtcaccacagattttccttgtcccgcttccg 694 Query: 283 caataatattgtcatatgcctttaacttttgagtatcatccaaggttttaaaagcccccc 342 ||||||||||||||||| ||| || |||||| ||||||||||| |||| |||||||||| Sbjct: 693 caataatattgtcatatacctgtagcttttggatatcatccaagtttttgaaagcccccc 634 Query: 343 tcaaaccaggcttggcggtatcatctgccaccagatcctgaaacttgattttgttaccct 402 | |||||| |||| | ||| ||| ||| ||||||| |||| |||||||||| ||| Sbjct: 633 taaaaccaagctttgacatattttcttgcacaagatcctcaaacatgattttgttttcct 574 Query: 403 tgagccattctgagaattgatttggtataaaatgttcaaacttttcggcatcctcaagcg 462 ||||||||| |||||||||||||||| ||| |||| |||||||| ||||| ||| |||| Sbjct: 573 tgagccattttgagaattgatttggtgcaaagtgttgaaactttttggcattctccagcg 514 Query: 463 cagctttcttatacctgccagcctcaagagcaaggcattgagcttccttctgttgagttg 522 |||||||||||| ||||||||||||| ||||||| || || ||||||||||| || | Sbjct: 513 tggctttcttatacatgccagcctcaagggcaaggcgctgggcctccttctgttgggtgg 454 Query: 523 ccggatcaagacactttagctgcttgatgagatcatcactgtgggtcttaaccttatcaa 582 | ||| || ||||||||||||||||||||||||||||||||||||| | ||| |||| Sbjct: 453 ctagattgaggaactttagctgcttgatgagatcatcactgtgggtcttgagcttgtcaa 394 Query: 583 ggtaggtgagacgggtgttgtaactacggatgaatttgagggatgttccgatggccttgg 642 ||||||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||||| Sbjct: 393 ggtaggtgagacgggtgttgtaactccggatgaattggagagatattccgatggccttgg 334 Query: 643 tgcagtactcatggacatccttagcaatatcttgcttggtggc 685 ||||||| |||| ||||||||| ||||||||||||||||||| Sbjct: 333 tgcagtagtcatagacatccttgccaatatcttgcttggtggc 291 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Minus Query: 111 gggtagttgtgcgtaacaaggcgagcgagttggagaccatcagtcataggagccacacga 170 ||||| |||||| |||| || |||||||||| |||||||| || |||||| |||||||| Sbjct: 1138 gggtaattgtgcttaactagacgagcgagttcgagaccatgaggcataggcgccacacgg 1079 Query: 171 caaccactaagcccgtctgttatattcaccttgctagttccactg 215 ||| | |||||||||||||||| ||||||||||||||||||||| Sbjct: 1078 caaactgtaagcccgtctgttatcttcaccttgctagttccactg 1034
>dbj|AP006374.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47L09, TM0218, complete sequence Length = 113213 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 tgcacaaagtggcagcaacaacaacaaaa 57 |||||||||||||| |||||||||||||| Sbjct: 94372 tgcacaaagtggcaacaacaacaacaaaa 94400
>gb|AC008200.5| Drosophila melanogaster clone BACR17P04, complete sequence Length = 163686 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 41 cagcaacaacaacaaaagatagcagca 67 ||||||||||||||||||| ||||||| Sbjct: 99668 cagcaacaacaacaaaagacagcagca 99694
>gb|AC008365.4| Drosophila melanogaster clone BACR03N12, complete sequence Length = 166693 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 41 cagcaacaacaacaaaagatagcagca 67 ||||||||||||||||||| ||||||| Sbjct: 690 cagcaacaacaacaaaagacagcagca 716
>emb|Z11840.1|DMHDGHOGD D.melanogaster hedgehog gene DNA Length = 19116 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 cagcaacaacaacaaaagatagcagca 67 ||||||||||||||||||| ||||||| Sbjct: 13511 cagcaacaacaacaaaagacagcagca 13485
>gb|AE003742.4| Drosophila melanogaster chromosome 3R, section 80 of 118 of the complete sequence Length = 233746 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 41 cagcaacaacaacaaaagatagcagca 67 ||||||||||||||||||| ||||||| Sbjct: 17616 cagcaacaacaacaaaagacagcagca 17642
>gb|AC115035.5| Mus musculus chromosome 3, clone RP24-273F11, complete sequence Length = 131719 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 gcagcaacaacaacaaaagata 61 |||||||||||||||||||||| Sbjct: 26936 gcagcaacaacaacaaaagata 26957
>gb|AC162790.2| Mus musculus chromosome 3, clone RP24-397C18, complete sequence Length = 169244 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 gcagcaacaacaacaaaagata 61 |||||||||||||||||||||| Sbjct: 77665 gcagcaacaacaacaaaagata 77644
>emb|CR676820.2|CNS0FL74 Tetraodon nigroviridis full-length cDNA Length = 767 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 tggcagcaacaacaacaaaaga 59 |||||||||||||||||||||| Sbjct: 376 tggcagcaacaacaacaaaaga 397
>emb|CR660102.2|CNS0F8B0 Tetraodon nigroviridis full-length cDNA Length = 721 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 tggcagcaacaacaacaaaaga 59 |||||||||||||||||||||| Sbjct: 330 tggcagcaacaacaacaaaaga 351
>emb|AL121999.18|HSJ543J13 Human DNA sequence from clone RP4-543J13 on chromosome 1p13.1-13.3 Contains a novel gene, complete sequence Length = 137490 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 320 atccaaggttttaaaagcccccctca 345 |||||||| ||||||||||||||||| Sbjct: 80442 atccaaggctttaaaagcccccctca 80417
>emb|AL645469.18| Mouse DNA sequence from clone RP23-340E18 on chromosome 11 Contains the Mylc2a gene for myosin light chain, regulatory A, the Gck gene for glucokinase, a novel gene, the gene for prenylated SNARE protein (Ykt6), the Camk2d gene for calcium/calmodulin-dependent protein kinase II delta and two CpG islands, complete sequence Length = 172356 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 gcagcaacaacaacaaaagata 61 |||||||||||||||||||||| Sbjct: 167285 gcagcaacaacaacaaaagata 167306
>gb|AC091742.5| Homo sapiens BAC clone RP11-1220K2 from 7, complete sequence Length = 191041 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 cagcaacaacaacaaaagatag 62 |||||||||||||||||||||| Sbjct: 122008 cagcaacaacaacaaaagatag 121987
>emb|AL928617.13| Mouse DNA sequence from clone RP23-326E21 on chromosome 2, complete sequence Length = 190652 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 501 tgagcttccttctgttgagttg 522 |||||||||||||||||||||| Sbjct: 133371 tgagcttccttctgttgagttg 133392
>ref|XM_639870.1| Dictyostelium discoideum hypothetical protein (DDB0168974), partial mRNA Length = 1779 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 gcagcaacaacaacaaaagat 60 ||||||||||||||||||||| Sbjct: 489 gcagcaacaacaacaaaagat 509
>gb|AC159435.1| Trypanosoma brucei chromosome 8 clone RPCI93-29H22, complete sequence Length = 148464 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 gtggcagcaacaacaacaaaa 57 ||||||||||||||||||||| Sbjct: 37754 gtggcagcaacaacaacaaaa 37774
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 gtggcagcaacaacaacaaaa 57 ||||||||||||||||||||| Sbjct: 1247977 gtggcagcaacaacaacaaaa 1247997
>gb|AC101800.8| Mus musculus chromosome 1, clone RP24-219K10, complete sequence Length = 177147 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 caacaacaacaaaagatagca 64 ||||||||||||||||||||| Sbjct: 72653 caacaacaacaaaagatagca 72673
>gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, complete sequence Length = 204108 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 agcttccttctgttgagttgc 523 ||||||||||||||||||||| Sbjct: 195826 agcttccttctgttgagttgc 195846
>gb|AC123852.4| Mus musculus BAC clone RP23-326G23 from chromosome 6, complete sequence Length = 195925 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 atttggtataaaatgttcaaa 442 ||||||||||||||||||||| Sbjct: 29219 atttggtataaaatgttcaaa 29199
>emb|AL645696.30| Mouse DNA sequence from clone RP23-429E18 on chromosome 1 Contains two novel genes, complete sequence Length = 159399 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 caacaacaacaaaagatagca 64 ||||||||||||||||||||| Sbjct: 16030 caacaacaacaaaagatagca 16050
>gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosome 9, complete sequence Length = 202301 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 agcttccttctgttgagttgc 523 ||||||||||||||||||||| Sbjct: 1374 agcttccttctgttgagttgc 1394
>gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188768 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 caacaacaacaaaagatagca 64 ||||||||||||||||||||| Sbjct: 95712 caacaacaacaaaagatagca 95732
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 gcagcaacaacaacaaaagat 60 ||||||||||||||||||||| Sbjct: 15606430 gcagcaacaacaacaaaagat 15606450
>gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence Length = 254733 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 gcagcaacaacaacaaaagat 60 ||||||||||||||||||||| Sbjct: 80109 gcagcaacaacaacaaaagat 80089
>gb|AC109912.10| Homo sapiens 3 BAC RP11-640G21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 86114 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 cagcaacaacaacaaaagata 61 ||||||||||||||||||||| Sbjct: 13721 cagcaacaacaacaaaagata 13741
>gb|AC092855.39| Mus musculus strain C57BL/6J chromosome 3 clone rp23-49o17, complete sequence Length = 249205 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 477 ctgccagcctcaagagcaagg 497 ||||||||||||||||||||| Sbjct: 205389 ctgccagcctcaagagcaagg 205409
>dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0644G05 Length = 143119 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 gcagcaacaacaacaaaagat 60 ||||||||||||||||||||| Sbjct: 133990 gcagcaacaacaacaaaagat 134010
>dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0035A24 Length = 176446 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 gcagcaacaacaacaaaagat 60 ||||||||||||||||||||| Sbjct: 15117 gcagcaacaacaacaaaagat 15137
>emb|AL049830.3|CNS00009 Human chromosome 14 DNA sequence BAC R-829H16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 214558 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 gtggcagcaacaacaacaaaa 57 ||||||||||||||||||||| Sbjct: 171411 gtggcagcaacaacaacaaaa 171431
>emb|AL627257.9| Mouse DNA sequence from clone RP23-3L4 on chromosome 4, complete sequence Length = 241053 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 tcaagacactttagctgcttg 548 ||||||||||||||||||||| Sbjct: 232266 tcaagacactttagctgcttg 232246
>emb|AL645471.8| Mouse DNA sequence from clone RP23-456M3 on chromosome 11, complete sequence Length = 178361 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 atagcagcagtagtagagtag 79 ||||||||||||||||||||| Sbjct: 18566 atagcagcagtagtagagtag 18586
>emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on chromosome 4, complete sequence Length = 168158 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 tcaagacactttagctgcttg 548 ||||||||||||||||||||| Sbjct: 14591 tcaagacactttagctgcttg 14571
>gb|AC101748.7| Mus musculus chromosome 5, clone RP24-133H21, complete sequence Length = 168366 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cagcaacaacaacaaaagat 60 |||||||||||||||||||| Sbjct: 90021 cagcaacaacaacaaaagat 90040
>gb|AC152953.1| Mus musculus 10 BAC RP23-403E19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 211343 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 aaagtggcagcaacaacaacaaaa 57 ||||||||| |||||||||||||| Sbjct: 145193 aaagtggcaacaacaacaacaaaa 145216
>gb|AC166238.7| Mus musculus chromosome 1, clone RP23-469H11, complete sequence Length = 181980 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 115763 agtggcagcaacaacaacaa 115744
>ref|XM_479497.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2035 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcgagcgagttggagacca 149 |||||||||||||||||||| Sbjct: 731 ggcgagcgagttggagacca 712
>ref|XM_513270.1| PREDICTED: Pan troglodytes similar to alpha 1 type XVI collagen precursor; collagen XVI, alpha-1 polypeptide (LOC456702), mRNA Length = 4389 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cccccctcaaaccaggcttg 356 |||||||||||||||||||| Sbjct: 3163 cccccctcaaaccaggcttg 3144
>gb|AC102270.8| Mus musculus chromosome 3, clone RP24-266A23, complete sequence Length = 185321 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 167157 agtggcagcaacaacaacaa 167176
>gb|AC102440.12| Mus musculus chromosome 1, clone RP24-146C18, complete sequence Length = 144770 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 caacaacaacaaaagatagc 63 |||||||||||||||||||| Sbjct: 51340 caacaacaacaaaagatagc 51321
>gb|AC011252.5| Drosophila melanogaster clone BACR23H21, complete sequence Length = 157965 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 26 gagtgcacaaagtggcagcaacaacaacaaaa 57 |||||||| ||| ||||| ||||||||||||| Sbjct: 96047 gagtgcacgaagcggcaggaacaacaacaaaa 96078
>gb|AC009357.8| Drosophila melanogaster clone BACR18I07, complete sequence Length = 179374 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 26 gagtgcacaaagtggcagcaacaacaacaaaa 57 |||||||| ||| ||||| ||||||||||||| Sbjct: 23079 gagtgcacgaagcggcaggaacaacaacaaaa 23110
>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland Research Institute) complete sequence Length = 227955 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 caacaacaacaaaagatagc 63 |||||||||||||||||||| Sbjct: 18884 caacaacaacaaaagatagc 18903
>ref|XM_875562.1| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family A, member 9 isoform a, transcript variant 5 (LOC504278), mRNA Length = 3523 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 647 gtactcatggacatccttagcaat 670 ||||||||||||||| |||||||| Sbjct: 3142 gtactcatggacatcattagcaat 3165
>ref|XM_865176.1| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family A, member 9 isoform a, transcript variant 3 (LOC504278), mRNA Length = 4685 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 647 gtactcatggacatccttagcaat 670 ||||||||||||||| |||||||| Sbjct: 3142 gtactcatggacatcattagcaat 3165
>ref|XM_658862.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6350.2), mRNA Length = 900 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 763 agtggcagcaacaacaacaa 782
>ref|XM_802377.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511559.50) partial mRNA Length = 1422 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tggcagcaacaacaacaaaa 57 |||||||||||||||||||| Sbjct: 1059 tggcagcaacaacaacaaaa 1078
>gb|AC125321.4| Mus musculus BAC clone RP23-371B13 from chromosome 9, complete sequence Length = 196150 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 caacaacaacaaaagatagcagca 67 ||||||||| |||||||||||||| Sbjct: 41406 caacaacaaaaaaagatagcagca 41429
>gb|AC122447.4| Mus musculus BAC clone RP24-240O5 from chromosome 9, complete sequence Length = 158058 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 caacaacaacaaaagatagcagca 67 ||||||||| |||||||||||||| Sbjct: 4411 caacaacaaaaaaagatagcagca 4388
>gb|AC125316.4| Mus musculus BAC clone RP24-250N3 from chromosome 3, complete sequence Length = 138128 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gcagcaacaacaacaaaaga 59 |||||||||||||||||||| Sbjct: 82700 gcagcaacaacaacaaaaga 82681
>emb|Z81581.1|CET02E1 Caenorhabditis elegans Cosmid T02E1, complete sequence Length = 33520 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ataaaatgttcaaacttttc 448 |||||||||||||||||||| Sbjct: 22873 ataaaatgttcaaacttttc 22854
>ref|XM_816038.1| Trypanosoma cruzi strain CL Brener cation transporter protein (Tc00.1047053508355.420) partial mRNA Length = 1827 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 cagcaacaacaacaaaagatagca 64 ||||| |||||||||||||||||| Sbjct: 25 cagcagcaacaacaaaagatagca 2
>gb|AC166057.2| Mus musculus BAC clone RP23-385D11 from chromosome 14, complete sequence Length = 198165 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 176309 agtggcagcaacaacaacaa 176328
>gb|AC133000.5| Rattus Norvegicus Strain CH230-62B6 BAC, BN/SsNHsd/MCW, complete sequence Length = 245581 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 150301 agtggcagcaacaacaacaa 150320
>emb|AL590627.25| Human DNA sequence from clone RP13-467E5 on chromosome 9 Contains a pseudogene similar to part of SET translocation (myeloid leukemia-associated) (SET), the 5' end of the gene for euchromatic histone methyltransferase 1 (FLJ12879, KIAA1876) (Eu-HMTase1) and two CpG islands, complete sequence Length = 166141 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gcagcaacaacaacaaaaga 59 |||||||||||||||||||| Sbjct: 139760 gcagcaacaacaacaaaaga 139779
>emb|AL354794.16| Human DNA sequence from clone RP11-203L2 on chromosome 9q21.11-21.2 Contains the 5' end of the PIP5K1B gene for phosphatidylinositol-4-phosphate 5-kinase, type I, beta (MSS4, STM7), a novel gene (MGC17374), a adaptor-related protein complex 3, mu 2 subunit (P47B, AP47B, CLA20) (AP3M2) pseudogene, the 3' end of a novel gene and 2 CpG islands, complete sequence Length = 154071 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 gagccattctgagaattgat 423 |||||||||||||||||||| Sbjct: 124912 gagccattctgagaattgat 124931
>emb|AL354694.18| Human DNA sequence from clone RP11-77E14 on chromosome 9 Contains a novel gene, complete sequence Length = 153324 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cccctcaaaccaggcttggc 358 |||||||||||||||||||| Sbjct: 113455 cccctcaaaccaggcttggc 113436
>emb|AL354827.5| Human DNA sequence from clone RP11-280J7 on chromosome 13, complete sequence Length = 127641 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 cagcaacaacaacaaaagatagca 64 |||||||||||||||||| ||||| Sbjct: 125371 cagcaacaacaacaaaagctagca 125348
>emb|AL031782.1|HS708F5 Human DNA sequence from clone RP4-708F5 on chromosome 6p11.2-12.3 Contains part of the COL21A1 gene for collagen, type XXI, alpha 1 (collagen XXI, collagen, type XX, alpha 1, COLA1L, COL20A1, DKFZp564B052), complete sequence Length = 126501 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 ttctgggataatcagttcat 104 |||||||||||||||||||| Sbjct: 93133 ttctgggataatcagttcat 93152
>ref|XM_964819.1| PREDICTED: Tribolium castaneum similar to CG8475-PA, isoform A (LOC658431), mRNA Length = 60889 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cagcaacaacaacaaaagat 60 |||||||||||||||||||| Sbjct: 35302 cagcaacaacaacaaaagat 35321
>emb|Z47746.1|SC8557 S.cerevisiae chromosome IV cosmid 8557 Length = 36217 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 668 aatatcttgcttggtggcgt 687 |||||||||||||||||||| Sbjct: 13717 aatatcttgcttggtggcgt 13736
>emb|AJ508355.1|BMA508355 Brugia malayi ORF1, ORF2, ORF3 and ORF4 DNA and alt-1 gene Length = 32442 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 taaaatgttcaaacttttcg 449 |||||||||||||||||||| Sbjct: 22062 taaaatgttcaaacttttcg 22043
>emb|AL773517.4| Mouse DNA sequence from clone RP24-170J19 on chromosome 4 Contains a t-complex protein 1 (Tcp1) pseudogene, complete sequence Length = 167940 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cagcaacaacaacaaaagatagca 64 ||||||||||||||||| |||||| Sbjct: 80920 cagcaacaacaacaaaaaatagca 80943
>gb|AC121541.31| Mus musculus chromosome 5, clone RP24-132B11, complete sequence Length = 171770 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 610 ggatgaatttgagggatgtt 629 |||||||||||||||||||| Sbjct: 5321 ggatgaatttgagggatgtt 5340
>gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosome 9, complete sequence Length = 205094 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cagcaacaacaacaaaagat 60 |||||||||||||||||||| Sbjct: 61473 cagcaacaacaacaaaagat 61492
>gb|AC010069.9| Drosophila melanogaster 3L BAC RP98-17C18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166352 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 acaacaaaagatagcagcag 68 |||||||||||||||||||| Sbjct: 27723 acaacaaaagatagcagcag 27742
>gb|AC011911.4| Drosophila melanogaster 3L BAC RP98-48J5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178394 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 tgcacaaagtggcagcaacaacaa 52 |||||||| ||||||||||||||| Sbjct: 139983 tgcacaaactggcagcaacaacaa 140006
>gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167344 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 tgcacaaagtggcagcaacaacaa 52 |||||||| ||||||||||||||| Sbjct: 5137 tgcacaaactggcagcaacaacaa 5160
>gb|AC116662.1| Rattus norvegicus, clone RP31-256A2, complete sequence Length = 112570 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 caacaacaacaaaagatagc 63 |||||||||||||||||||| Sbjct: 96363 caacaacaacaaaagatagc 96344
>ref|NM_164834.1| Drosophila melanogaster Hepatocyte nuclear factor 4 CG9310-RC, transcript variant C (Hnf4), mRNA Length = 2656 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 345 agtggcagcaacaacaacaa 364
>ref|NM_164833.1| Drosophila melanogaster Hepatocyte nuclear factor 4 CG9310-RB, transcript variant B (Hnf4), mRNA Length = 2715 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 404 agtggcagcaacaacaacaa 423
>ref|NM_057539.3| Drosophila melanogaster Hepatocyte nuclear factor 4 CG9310-RA, transcript variant A (Hnf4), mRNA Length = 3248 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 937 agtggcagcaacaacaacaa 956
>gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor (COL21A1) gene, complete cds, alternatively spliced Length = 381696 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ttctgggataatcagttcat 104 |||||||||||||||||||| Sbjct: 184174 ttctgggataatcagttcat 184155
>gb|AC104082.3| Homo sapiens BAC clone RP11-570L13 from 4, complete sequence Length = 182770 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 agcaacaacaacaaaagata 61 |||||||||||||||||||| Sbjct: 149605 agcaacaacaacaaaagata 149586
>gb|AC018622.10| Homo sapiens chromosome 8, clone RP11-346M13, complete sequence Length = 187574 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 50343 agtggcagcaacaacaacaa 50362
>gb|AC091614.3| Homo sapiens chromosome 1 clone RP4-665J23, complete sequence Length = 107764 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 cttctgttgagttgccggat 528 |||||||||||||||||||| Sbjct: 16125 cttctgttgagttgccggat 16106
>gb|AC099512.2| Homo sapiens chromosome 5 clone RP11-351K10, complete sequence Length = 161775 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 65445 agtggcagcaacaacaacaa 65464
>gb|AC158388.2| Mus musculus BAC clone RP24-545I9 from chromosome 14, complete sequence Length = 183148 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gcagcaacaacaacaaaaga 59 |||||||||||||||||||| Sbjct: 121663 gcagcaacaacaacaaaaga 121682
>ref|NM_001026692.2| Caenorhabditis elegans human KRIT 1 (Krev interaction trapped/cerebral cavernous malformation 1) homolog family member (kri-1) (kri-1) mRNA, complete cds Length = 2227 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ataaaatgttcaaacttttc 448 |||||||||||||||||||| Sbjct: 2195 ataaaatgttcaaacttttc 2214
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 5187244 agtggcagcaacaacaacaa 5187225
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggcgagcgagttggagacca 149 |||||||||||||||||||| Sbjct: 28508650 ggcgagcgagttggagacca 28508669
>gb|AC008331.7|AC008331 Drosophila melanogaster, chromosome 2L, region 29D-29E, BAC clone BACR02B16, complete sequence Length = 186938 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 108742 agtggcagcaacaacaacaa 108723
>gb|AC150749.3| Pan troglodytes BAC clone CH251-553P23 from chromosome 7, complete sequence Length = 237211 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cagcaacaacaacaaaagat 60 |||||||||||||||||||| Sbjct: 183614 cagcaacaacaacaaaagat 183595
>gb|AC007278.4| Homo sapiens BAC clone RP11-308G20 from 2, complete sequence Length = 162508 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 agcattctgggataatcagttcat 104 ||||||||||||||| |||||||| Sbjct: 37421 agcattctgggataagcagttcat 37444
>gb|AC005037.2| Homo sapiens BAC clone RP11-469M7 from 2, complete sequence Length = 190508 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gtatcatctgccaccagatc 379 |||||||||||||||||||| Sbjct: 169597 gtatcatctgccaccagatc 169578
>gb|BT003533.1| Drosophila melanogaster RE09535 full insert cDNA Length = 3333 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 937 agtggcagcaacaacaacaa 956
>gb|AC055811.20| Homo sapiens chromosome 17, clone RP11-45M22, complete sequence Length = 143790 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gcagcaacaacaacaaaaga 59 |||||||||||||||||||| Sbjct: 111082 gcagcaacaacaacaaaaga 111063
>gb|AC122716.2| Homo sapiens chromosome 5 clone RP11-567A12, complete sequence Length = 171057 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cagcaacaacaacaaaagat 60 |||||||||||||||||||| Sbjct: 112952 cagcaacaacaacaaaagat 112971
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0037D09 Length = 140470 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggcgagcgagttggagacca 149 |||||||||||||||||||| Sbjct: 74402 ggcgagcgagttggagacca 74421
>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0618H09 Length = 142306 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggcgagcgagttggagacca 149 |||||||||||||||||||| Sbjct: 66191 ggcgagcgagttggagacca 66210
>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1099H05 Length = 186036 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 55600 agtggcagcaacaacaacaa 55581
>gb|AC144691.3| Didelphis virginiana clone LB3-241H11, complete sequence Length = 158347 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tagcagcagtagtagagtag 79 |||||||||||||||||||| Sbjct: 27406 tagcagcagtagtagagtag 27425
>dbj|AK101251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032F02, full insert sequence Length = 2035 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggcgagcgagttggagacca 149 |||||||||||||||||||| Sbjct: 731 ggcgagcgagttggagacca 712
>gb|AE003622.4| Drosophila melanogaster chromosome 2L, section 31 of 83 of the complete sequence Length = 262557 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 20420 agtggcagcaacaacaacaa 20401
>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete sequence Length = 265524 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 tgcacaaagtggcagcaacaacaa 52 |||||||| ||||||||||||||| Sbjct: 16175 tgcacaaactggcagcaacaacaa 16198
>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the complete sequence Length = 425677 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 acaacaaaagatagcagcag 68 |||||||||||||||||||| Sbjct: 98708 acaacaaaagatagcagcag 98689
>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence Length = 201379 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 caacaacaacaaaagatagc 63 |||||||||||||||||||| Sbjct: 165007 caacaacaacaaaagatagc 164988
>gb|AE003601.4| Drosophila melanogaster chromosome 3R, section 7 of 118 of the complete sequence Length = 305165 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 26 gagtgcacaaagtggcagcaacaacaacaaaa 57 |||||||| ||| ||||| ||||||||||||| Sbjct: 165880 gagtgcacgaagcggcaggaacaacaacaaaa 165911
>gb|AC116556.14| Mus musculus strain C57BL/6J chromosome 8 clone rp23-184i13, complete sequence Length = 239958 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cagcaacaacaacaaaagat 60 |||||||||||||||||||| Sbjct: 62877 cagcaacaacaacaaaagat 62858
>gb|AC153864.5| Mus musculus 10 BAC RP23-345N8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196411 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cagcaacaacaacaaaagat 60 |||||||||||||||||||| Sbjct: 147266 cagcaacaacaacaaaagat 147247
>emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on chromosome 13, complete sequence Length = 226457 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cagcaacaacaacaaaagat 60 |||||||||||||||||||| Sbjct: 190041 cagcaacaacaacaaaagat 190060
>gb|BT001800.1| Drosophila melanogaster RH29074 full insert cDNA Length = 2760 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 405 agtggcagcaacaacaacaa 424
>gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, complete sequence Length = 192344 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 caacaacaacaaaagatagc 63 |||||||||||||||||||| Sbjct: 40621 caacaacaacaaaagatagc 40602
>gb|AC142258.4| Mus musculus BAC clone RP24-511I20 from 13, complete sequence Length = 159880 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cagcaacaacaacaaaagat 60 |||||||||||||||||||| Sbjct: 27629 cagcaacaacaacaaaagat 27648
>gb|AC140919.2| Mus musculus BAC clone RP24-510L10 from 1, complete sequence Length = 159472 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cagcaacaacaacaaaagat 60 |||||||||||||||||||| Sbjct: 37592 cagcaacaacaacaaaagat 37573
>gb|AC168068.3| Mus musculus BAC clone RP23-99G15 from chromosome 8, complete sequence Length = 237728 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cagcaacaacaacaaaagatagca 64 ||||||||||||||||||| |||| Sbjct: 185293 cagcaacaacaacaaaagagagca 185316
>emb|CR974566.12| Pig DNA sequence from clone CH242-112C22 on chromosome 17, complete sequence Length = 164668 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gcagcaacaacaacaaaaga 59 |||||||||||||||||||| Sbjct: 112867 gcagcaacaacaacaaaaga 112886
>emb|CT027681.7| Mouse DNA sequence from clone RP24-330H24 on chromosome 16, complete sequence Length = 190475 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 catccttagcaatatcttgc 677 |||||||||||||||||||| Sbjct: 78525 catccttagcaatatcttgc 78506
>gb|U70874.1|DMU70874 Drosophila melanogaster hepatocyte nuclear factor 4 homolog (HNF-4(D)) mRNA, complete cds Length = 2964 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 652 agtggcagcaacaacaacaa 671
>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold Length = 1751794 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tagcagcagtagtagagtag 79 |||||||||||||||||||| Sbjct: 1251550 tagcagcagtagtagagtag 1251569
>gb|AC170999.2| Mus musculus BAC clone RP23-443L17 from chromosome 14, complete sequence Length = 196017 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cagcaacaacaacaaaagat 60 |||||||||||||||||||| Sbjct: 84580 cagcaacaacaacaaaagat 84561
>emb|AJ009613.4|HSAJ9613 Homo sapiens chromosome 17 sequence from cosmid 5L05 region D17S842-D17S953 map 17p11.2, complete sequence Length = 43241 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gcagcaacaacaacaaaaga 59 |||||||||||||||||||| Sbjct: 15988 gcagcaacaacaacaaaaga 16007
>emb|AL928680.5| Mouse DNA sequence from clone RP23-396N6 on chromosome 2, complete sequence Length = 217726 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gcagcaacaacaacaaaaga 59 |||||||||||||||||||| Sbjct: 187217 gcagcaacaacaacaaaaga 187236
>gb|AC170595.2| Mus musculus BAC clone RP23-444B8 from chromosome 14, complete sequence Length = 195329 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 agtggcagcaacaacaacaa 55 |||||||||||||||||||| Sbjct: 168595 agtggcagcaacaacaacaa 168576
>dbj|AB055144.1| Halocynthia roretzi Hremx mRNA for transcription factor ems/emx, complete cds Length = 2401 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cagcaacaacaacaaaagatagca 64 ||||||||||||||| |||||||| Sbjct: 1740 cagcaacaacaacaagagatagca 1763 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,090,865 Number of Sequences: 3902068 Number of extensions: 7090865 Number of successful extensions: 262499 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 261840 Number of HSP's gapped (non-prelim): 657 length of query: 691 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 668 effective length of database: 17,143,297,704 effective search space: 11451722866272 effective search space used: 11451722866272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
