ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39k23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB233453.1| Oryza sativa (japonica cultivar-group) OsPPCK2L ... 226 6e-56
2dbj|AB233452.1| Oryza sativa (japonica cultivar-group) OsPPCK2S ... 226 6e-56
3gb|AF399915.1|AF399915 Sorghum bicolor phosphoenolpyruvate carbo... 167 5e-38
4gb|AY911414.1| Zea mays phosphoenolpyruvate carboxylase kinase 2... 159 1e-35
5ref|XM_473187.1| Oryza sativa (japonica cultivar-group), predic... 157 5e-35
6dbj|AB234234.1| Oryza sativa (japonica cultivar-group) OsPPCK3 m... 157 5e-35
7dbj|AK066885.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 5e-35
8gb|AY911415.1| Zea mays phosphoenolpyruvate carboxylase kinase 3... 151 3e-33
9gb|BT018830.1| Zea mays clone EL01N0551C10.d mRNA sequence 137 4e-29
10ref|XM_466833.1| Oryza sativa (japonica cultivar-group), mRNA 129 1e-26
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
12dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
13emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4,... 123 7e-25
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
15gb|AY911416.1| Zea mays phosphoenolpyruvate carboxylase kinase 4... 119 1e-23
16gb|BT018640.1| Zea mays clone EL01N0504G05.d mRNA sequence 86 1e-13
17gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 44 0.49
18gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
19ref|XM_813237.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.49
20gb|AE014075.1| Escherichia coli CFT073, complete genome 44 0.49
21gb|CP000243.1| Escherichia coli UTI89, complete genome 44 0.49
22gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 44 0.49
23dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 44 0.49
24gb|AC010042.8| Drosophila melanogaster 3L BAC RP98-5K6 (Roswell ... 44 0.49
25ref|NM_206299.1| Drosophila melanogaster Clock CG7391-RC, transc... 44 0.49
26ref|NM_170628.1| Drosophila melanogaster Clock CG7391-RB, transc... 44 0.49
27ref|NM_079240.2| Drosophila melanogaster Clock CG7391-RA, transc... 44 0.49
28ref|NM_001014576.1| Drosophila melanogaster Clock CG7391-RD, tra... 44 0.49
29ref|NM_001014575.1| Drosophila melanogaster Clock CG7391-RE, tra... 44 0.49
30ref|NM_001014574.1| Drosophila melanogaster Clock CG7391-RF, tra... 44 0.49
31gb|AC091225.2| Drosophila melanogaster 3L BAC RP98-34B24 (Roswel... 44 0.49
32ref|XM_687846.1| PREDICTED: Danio rerio similar to Nuclear recep... 44 0.49
33emb|BX296530.7| Zebrafish DNA sequence from clone DKEY-22H2 in l... 44 0.49
34gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01,... 44 0.49
35dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
36gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 44 0.49
37gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28... 44 0.49
38gb|AF067207.1|AF067207 Drosophila melanogaster CLOCK mRNA, compl... 44 0.49
39dbj|D16557.1|ECOICC Escherichia coli gene for Icc protein, compl... 44 0.49
40gb|AF069997.1|AF069997 Drosophila melanogaster CLOCK mRNA, compl... 44 0.49
41gb|AF065133.1|AF065133 Drosophila melanogaster CLOCK (Clk) mRNA,... 44 0.49
42gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 44 0.49
43dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 44 0.49
44gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 44 0.49
45gb|U28377.1|ECU28377 Escherichia coli K-12 genome; approximately... 44 0.49
46gb|CP000036.1| Shigella boydii Sb227, complete genome 44 0.49
47gb|CP000038.1| Shigella sonnei Ss046, complete genome 44 0.49
48gb|AC102156.16| Mus musculus chromosome 18, clone RP23-334L7, co... 42 2.0
49ref|XM_514700.1| PREDICTED: Pan troglodytes LOC458308 (LOC458308... 42 2.0
50gb|AY225363.1| Pan troglodytes nuclear receptor coactivator 3 (N... 42 2.0
51gb|AF241732.1| Homo sapiens chromosome X clone XXcos-P117 map p1... 42 2.0
52gb|AF241731.2| Homo sapiens chromosome X clone LL0XNC01-45P13 ma... 42 2.0
53gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, co... 42 2.0
54gb|AY462627.1| Plasmodium falciparum erythrocyte membrane protei... 42 2.0
55gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 42 2.0
56ref|NM_181659.1| Homo sapiens nuclear receptor coactivator 3 (NC... 42 2.0
57ref|NM_006534.2| Homo sapiens nuclear receptor coactivator 3 (NC... 42 2.0
58emb|AL034418.5|HS1049G16 Human DNA sequence from clone RP5-1049G... 42 2.0
59gb|BC092516.1| Homo sapiens nuclear receptor coactivator 3, tran... 42 2.0
60gb|BC097784.1| Xenopus laevis cDNA clone MGC:115491 IMAGE:686863... 42 2.0
61gb|AC173996.2| Pan troglodytes chromosome X clone PTB-074P14 map... 42 2.0
62gb|BC044297.1| Xenopus laevis, Similar to RIKEN cDNA 4732481H14 ... 42 2.0
63gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, com... 42 2.0
64ref|XM_564199.1| Anopheles gambiae str. PEST ENSANGP00000028013 ... 42 2.0
65emb|CR626902.14| Zebrafish DNA sequence from clone CH211-1F22 in... 42 2.0
66emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 2.0
67gb|AF016031.1|AF016031 Homo sapiens thyroid hormone receptor act... 42 2.0
68gb|AF012108.1|AF012108 Homo sapiens Amplified in Breast Cancer (... 42 2.0
69gb|AF010227.1|AF010227 Homo sapiens receptor-associated coactiva... 42 2.0
70gb|AF023138.1|DVBIGB5 Drosophila virilis big brain (bib) gene, e... 42 2.0
71emb|BX908759.27| Zebrafish DNA sequence from clone DKEY-27J5 in ... 42 2.0
72dbj|AB209863.1| Homo sapiens mRNA for nuclear receptor coactivat... 42 2.0
73gb|BC086712.1| Danio rerio zgc:101641, mRNA (cDNA clone MGC:1016... 40 7.7
74ref|NM_124872.2| Arabidopsis thaliana ATRBP45A; RNA binding AT5G... 40 7.7
75gb|CP000097.1| Synechococcus sp. CC9902, complete genome 40 7.7
76gb|U80737.1|HSU80737 Homo sapiens CAGH16 mRNA, complete cds 40 7.7
77gb|AY225364.1| Gorilla gorilla nuclear receptor coactivator 3 (N... 40 7.7
78gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 7.7
79gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
80gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, comp... 40 7.7
81gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.7
82gb|AC139939.6| Mus musculus chromosome 1, clone RP23-458O23, com... 40 7.7
83gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genom... 40 7.7
84emb|AL590226.23| Human DNA sequence from clone RP11-251M1 on chr... 40 7.7
85emb|BX294018.1|NCB8P8 Neurospora crassa DNA linkage group V BAC ... 40 7.7
86emb|AJ851458.1| Gallus gallus mRNA for hypothetical protein, clo... 40 7.7
87gb|AC161929.4| Mus musculus chromosome 7, clone RP23-120D7, comp... 40 7.7
88gb|AC087373.4| Homo sapiens chromosome 11, clone RP11-54J7, comp... 40 7.7
89ref|XM_694520.1| PREDICTED: Danio rerio similar to BMP2 inducibl... 40 7.7
90ref|XM_704579.1| PREDICTED: Danio rerio similar to BMP2 inducibl... 40 7.7
91ref|XM_689585.1| PREDICTED: Danio rerio similar to BMP2 inducibl... 40 7.7
92ref|NM_001012825.1| Gallus gallus RAS p21 protein activator 3 (R... 40 7.7
93gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genom... 40 7.7
94gb|AC158522.2| Mus musculus BAC clone RP23-400N21 from chromosom... 40 7.7
95emb|BX640536.6| Zebrafish DNA sequence from clone CH211-191A6 in... 40 7.7
96gb|AF324983.2|AF324983 Arabidopsis thaliana AT5g54900 (AT5g54900... 40 7.7
97dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
98dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
99dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
100dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
101ref|NM_001008644.1| Danio rerio zgc:101641 (zgc:101641), mRNA 40 7.7
102dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
103dbj|AP003806.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
104dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.7
105emb|AL929264.4| Zebrafish DNA sequence from clone CH211-59C24 in... 40 7.7
106emb|X87329.1|PSPAF1 P.anserina car1 gene 40 7.7
107emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 7.7
108emb|BX004805.6| Zebrafish DNA sequence from clone DKEY-196N8 in ... 40 7.7
109gb|AF036892.1|AF036892 Homo sapiens nuclear receptor coactivator... 40 7.7 
>dbj|AB233453.1| Oryza sativa (japonica cultivar-group) OsPPCK2L mRNA for
           phosphoenolpyruvate carboxylase kinase, complete cds
          Length = 1458

 Score =  226 bits (114), Expect = 6e-56
 Identities = 159/174 (91%)
 Strand = Plus / Minus

                                                                       
Query: 359 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtggcggag 418
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 964 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtgaccgag 905

                                                                       
Query: 419 gacttgctcggcggagaagcgtctccactcgtcgcggcacatcatccgcctcatcaggtc 478
           ||||||||||||||||||||| |||||   ||||||||||||||| |||||||| |||||
Sbjct: 904 gacttgctcggcggagaagcgcctccaggtgtcgcggcacatcatgcgcctcatgaggtc 845

                                                                 
Query: 479 cttggcggccggagacacgccggagaacagcctcggagggaaccgaacgctgcc 532
           |||||| ||||| |||||||||| ||||||||| || |||||||  ||||||||
Sbjct: 844 cttggccgccggggacacgccggcgaacagcctaggcgggaacctgacgctgcc 791
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>dbj|AB233452.1| Oryza sativa (japonica cultivar-group) OsPPCK2S mRNA for
           phosphoenolpyruvate carboxylase kinase, complete cds
          Length = 1404

 Score =  226 bits (114), Expect = 6e-56
 Identities = 159/174 (91%)
 Strand = Plus / Minus

                                                                       
Query: 359 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtggcggag 418
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 910 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtgaccgag 851

                                                                       
Query: 419 gacttgctcggcggagaagcgtctccactcgtcgcggcacatcatccgcctcatcaggtc 478
           ||||||||||||||||||||| |||||   ||||||||||||||| |||||||| |||||
Sbjct: 850 gacttgctcggcggagaagcgcctccaggtgtcgcggcacatcatgcgcctcatgaggtc 791

                                                                 
Query: 479 cttggcggccggagacacgccggagaacagcctcggagggaaccgaacgctgcc 532
           |||||| ||||| |||||||||| ||||||||| || |||||||  ||||||||
Sbjct: 790 cttggccgccggggacacgccggcgaacagcctaggcgggaacctgacgctgcc 737
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>gb|AF399915.1|AF399915 Sorghum bicolor phosphoenolpyruvate carboxylase kinase (PPCK) mRNA,
           complete cds
          Length = 1389

 Score =  167 bits (84), Expect = 5e-38
 Identities = 162/188 (86%)
 Strand = Plus / Minus

                                                                       
Query: 359 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtggcggag 418
           |||||||||| |||| || || || |||||||||||||||||||||||||||||   |||
Sbjct: 944 tcaggttggccgctcgattgcccgtgctcctccgccgctcacgatccacgggtgagcgag 885

                                                                       
Query: 419 gacttgctcggcggagaagcgtctccactcgtcgcggcacatcatccgcctcatcaggtc 478
           |||||||||||||| ||| |  | ||||||||||||||| ||||| ||||||| ||||||
Sbjct: 884 gacttgctcggcggtgaacctccgccactcgtcgcggcagatcatgcgcctcaacaggtc 825

                                                                       
Query: 479 cttggcggccggagacacgccggagaacagcctcggagggaaccgaacgctgccccgcat 538
           |||||| || || ||||| |||  ||||||||| || |||||||| ||||||||||||| 
Sbjct: 824 cttggccgcgggggacaccccgctgaacagcctgggcgggaaccggacgctgccccgcag 765

                   
Query: 539 cacggccg 546
           ||||||||
Sbjct: 764 cacggccg 757
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>gb|AY911414.1| Zea mays phosphoenolpyruvate carboxylase kinase 2 (PPCK2) mRNA,
           complete cds
          Length = 1024

 Score =  159 bits (80), Expect = 1e-35
 Identities = 161/188 (85%)
 Strand = Plus / Minus

                                                                       
Query: 359 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtggcggag 418
           |||||||||| ||||||| || |||||||||||||| |||||||||||||||||   |||
Sbjct: 897 tcaggttggccgctccattgcccgggctcctccgccactcacgatccacgggtgagcgag 838

                                                                       
Query: 419 gacttgctcggcggagaagcgtctccactcgtcgcggcacatcatccgcctcatcaggtc 478
           |||||||||||||| ||| |  ||||||||||||||||| ||||| |||| |||||||||
Sbjct: 837 gacttgctcggcggtgaacctcctccactcgtcgcggcagatcatgcgccgcatcaggtc 778

                                                                       
Query: 479 cttggcggccggagacacgccggagaacagcctcggagggaaccgaacgctgccccgcat 538
           ||||||||| || ||||| |||  ||| ||||| || ||||| ||  ||||||| |||| 
Sbjct: 777 cttggcggcgggcgacaccccgccgaagagcctgggcgggaagcgcgcgctgccgcgcag 718

                   
Query: 539 cacggccg 546
           ||||||||
Sbjct: 717 cacggccg 710
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>ref|XM_473187.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 861

 Score =  157 bits (79), Expect = 5e-35
 Identities = 124/139 (89%)
 Strand = Plus / Minus

                                                                       
Query: 384 gctcctccgccgctcacgatccacgggtggcggaggacttgctcggcggagaagcgtctc 443
           |||||||| |||||||||||||||||||| |  |||||||||||||||||||| |  || 
Sbjct: 839 gctcctcctccgctcacgatccacgggtgcctcaggacttgctcggcggagaacctcctg 780

                                                                       
Query: 444 cactcgtcgcggcacatcatccgcctcatcaggtccttggcggccggagacacgccggag 503
            |  ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 779 tagacgtcgcggcacatcatccgccgcatcaggtccttggcagccggcgacacgccggag 720

                              
Query: 504 aacagcctcggagggaacc 522
           ||||||||||| |||||||
Sbjct: 719 aacagcctcggcgggaacc 701
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>dbj|AB234234.1| Oryza sativa (japonica cultivar-group) OsPPCK3 mRNA for
           phosphoenolpyruvate carboxylase kinase, complete cds
          Length = 1224

 Score =  157 bits (79), Expect = 5e-35
 Identities = 124/139 (89%)
 Strand = Plus / Minus

                                                                       
Query: 384 gctcctccgccgctcacgatccacgggtggcggaggacttgctcggcggagaagcgtctc 443
           |||||||| |||||||||||||||||||| |  |||||||||||||||||||| |  || 
Sbjct: 882 gctcctcctccgctcacgatccacgggtgcctcaggacttgctcggcggagaacctcctg 823

                                                                       
Query: 444 cactcgtcgcggcacatcatccgcctcatcaggtccttggcggccggagacacgccggag 503
            |  ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 822 tagacgtcgcggcacatcatccgccgcatcaggtccttggcagccggcgacacgccggag 763

                              
Query: 504 aacagcctcggagggaacc 522
           ||||||||||| |||||||
Sbjct: 762 aacagcctcggcgggaacc 744
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>dbj|AK066885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088G18, full
           insert sequence
          Length = 1224

 Score =  157 bits (79), Expect = 5e-35
 Identities = 124/139 (89%)
 Strand = Plus / Minus

                                                                       
Query: 384 gctcctccgccgctcacgatccacgggtggcggaggacttgctcggcggagaagcgtctc 443
           |||||||| |||||||||||||||||||| |  |||||||||||||||||||| |  || 
Sbjct: 882 gctcctcctccgctcacgatccacgggtgcctcaggacttgctcggcggagaacctcctg 823

                                                                       
Query: 444 cactcgtcgcggcacatcatccgcctcatcaggtccttggcggccggagacacgccggag 503
            |  ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 822 tagacgtcgcggcacatcatccgccgcatcaggtccttggcagccggcgacacgccggag 763

                              
Query: 504 aacagcctcggagggaacc 522
           ||||||||||| |||||||
Sbjct: 762 aacagcctcggcgggaacc 744
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>gb|AY911415.1| Zea mays phosphoenolpyruvate carboxylase kinase 3 (PPCK3) mRNA,
           complete cds
          Length = 995

 Score =  151 bits (76), Expect = 3e-33
 Identities = 160/188 (85%)
 Strand = Plus / Minus

                                                                       
Query: 359 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtggcggag 418
           |||||||||| |||||||  | |||||||| |||||||||||||||||||||||   |||
Sbjct: 980 tcaggttggccgctccataccacgggctccgccgccgctcacgatccacgggtgagcgag 921

                                                                       
Query: 419 gacttgctcggcggagaagcgtctccactcgtcgcggcacatcatccgcctcatcaggtc 478
           ||| |||||||||| ||| |  ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 920 gacctgctcggcggtgaacctcctccactcgtcgcggcagatcatgcgcctcatcaggtc 861

                                                                       
Query: 479 cttggcggccggagacacgccggagaacagcctcggagggaaccgaacgctgccccgcat 538
           |||||| || || ||||| |||  ||||||||  || ||||| ||  |||||||||||| 
Sbjct: 860 cttggccgcgggggacaccccgccgaacagccggggcgggaagcgcgcgctgccccgcag 801

                   
Query: 539 cacggccg 546
           ||||||||
Sbjct: 800 cacggccg 793
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>gb|BT018830.1| Zea mays clone EL01N0551C10.d mRNA sequence
          Length = 1363

 Score =  137 bits (69), Expect = 4e-29
 Identities = 160/189 (84%), Gaps = 1/189 (0%)
 Strand = Plus / Minus

                                                                       
Query: 359 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtggcggag 418
           |||||||||| |||||||  | |||||||| |||||||||||||||||||||||   |||
Sbjct: 960 tcaggttggccgctccatgccacgggctccgccgccgctcacgatccacgggtgagcgag 901

                                                                       
Query: 419 gacttgctcggcggagaagcgtctccactcgtcgcggcacatcatccgcctcatcaggtc 478
           ||| |||||||||| ||| |  ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 900 gacctgctcggcggtgaacctcctccactcgtcgcggcagatcatgcgcctcatcaggtc 841

                                                                       
Query: 479 cttggcggccggagacacgccggagaacagcc-tcggagggaaccgaacgctgccccgca 537
           |||||| || || ||||| |||  ||||||||   || ||||| ||  ||||||||||||
Sbjct: 840 cttggccgcgggggacaccccgccgaacagccgggggcgggaagcgcgcgctgccccgca 781

                    
Query: 538 tcacggccg 546
            ||||||||
Sbjct: 780 gcacggccg 772
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>ref|XM_466833.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 936

 Score =  129 bits (65), Expect = 1e-26
 Identities = 104/117 (88%)
 Strand = Plus / Minus

                                                                       
Query: 416 gaggacttgctcggcggagaagcgtctccactcgtcgcggcacatcatccgcctcatcag 475
           |||||||||||||||||||||||| |||||   ||||||||||||||| |||||||| ||
Sbjct: 822 gaggacttgctcggcggagaagcgcctccaggtgtcgcggcacatcatgcgcctcatgag 763

                                                                    
Query: 476 gtccttggcggccggagacacgccggagaacagcctcggagggaaccgaacgctgcc 532
           ||||||||| ||||| |||||||||| ||||||||| || |||||||  ||||||||
Sbjct: 762 gtccttggccgccggggacacgccggcgaacagcctaggcgggaacctgacgctgcc 706



 Score =  107 bits (54), Expect = 4e-20
 Identities = 54/54 (100%)
 Strand = Plus / Minus

                                                                 
Query: 359 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtg 412
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtg 883
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  129 bits (65), Expect = 1e-26
 Identities = 104/117 (88%)
 Strand = Plus / Minus

                                                                            
Query: 416      gaggacttgctcggcggagaagcgtctccactcgtcgcggcacatcatccgcctcatcag 475
                |||||||||||||||||||||||| |||||   ||||||||||||||| |||||||| ||
Sbjct: 24954332 gaggacttgctcggcggagaagcgcctccaggtgtcgcggcacatcatgcgcctcatgag 24954273

                                                                         
Query: 476      gtccttggcggccggagacacgccggagaacagcctcggagggaaccgaacgctgcc 532
                ||||||||| ||||| |||||||||| ||||||||| || |||||||  ||||||||
Sbjct: 24954272 gtccttggccgccggggacacgccggcgaacagcctaggcgggaacctgacgctgcc 24954216



 Score =  107 bits (54), Expect = 4e-20
 Identities = 54/54 (100%)
 Strand = Plus / Minus

                                                                      
Query: 359      tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtg 412
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24954506 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtg 24954453
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>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1215B07
          Length = 165957

 Score =  129 bits (65), Expect = 1e-26
 Identities = 104/117 (88%)
 Strand = Plus / Minus

                                                                          
Query: 416    gaggacttgctcggcggagaagcgtctccactcgtcgcggcacatcatccgcctcatcag 475
              |||||||||||||||||||||||| |||||   ||||||||||||||| |||||||| ||
Sbjct: 115615 gaggacttgctcggcggagaagcgcctccaggtgtcgcggcacatcatgcgcctcatgag 115556

                                                                       
Query: 476    gtccttggcggccggagacacgccggagaacagcctcggagggaaccgaacgctgcc 532
              ||||||||| ||||| |||||||||| ||||||||| || |||||||  ||||||||
Sbjct: 115555 gtccttggccgccggggacacgccggcgaacagcctaggcgggaacctgacgctgcc 115499



 Score =  107 bits (54), Expect = 4e-20
 Identities = 54/54 (100%)
 Strand = Plus / Minus

                                                                    
Query: 359    tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtg 412
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115789 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtg 115736
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>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02,
             complete sequence
          Length = 139080

 Score =  123 bits (62), Expect = 7e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                         
Query: 417   aggacttgctcggcggagaagcgtctccactcgtcgcggcacatcatccgcctcatcagg 476
             |||||||||||||||||||| |  ||  |  ||||||||||||||||||||| |||||||
Sbjct: 59507 aggacttgctcggcggagaacctcctgtagacgtcgcggcacatcatccgccgcatcagg 59448

                                                           
Query: 477   tccttggcggccggagacacgccggagaacagcctcggagggaacc 522
             |||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct: 59447 tccttggcagccggcgacacgccggagaacagcctcggcgggaacc 59402



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 384   gctcctccgccgctcacgatccacgggtg 412
             |||||||| ||||||||||||||||||||
Sbjct: 59696 gctcctcctccgctcacgatccacgggtg 59668
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  123 bits (62), Expect = 7e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                            
Query: 417      aggacttgctcggcggagaagcgtctccactcgtcgcggcacatcatccgcctcatcagg 476
                |||||||||||||||||||| |  ||  |  ||||||||||||||||||||| |||||||
Sbjct: 25842097 aggacttgctcggcggagaacctcctgtagacgtcgcggcacatcatccgccgcatcagg 25842038

                                                              
Query: 477      tccttggcggccggagacacgccggagaacagcctcggagggaacc 522
                |||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct: 25842037 tccttggcagccggcgacacgccggagaacagcctcggcgggaacc 25841992



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 384      gctcctccgccgctcacgatccacgggtg 412
                |||||||| ||||||||||||||||||||
Sbjct: 25842286 gctcctcctccgctcacgatccacgggtg 25842258
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>gb|AY911416.1| Zea mays phosphoenolpyruvate carboxylase kinase 4 (PPCK4) mRNA,
           complete cds
          Length = 1214

 Score =  119 bits (60), Expect = 1e-23
 Identities = 168/204 (82%)
 Strand = Plus / Minus

                                                                       
Query: 359 tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtggcggag 418
           |||||||||| || ||| | ||||| |||| || ||||||  |||||||||||| | |||
Sbjct: 883 tcaggttggccgcaccagctctcggcctccgcctccgctctggatccacgggtgcctgag 824

                                                                       
Query: 419 gacttgctcggcggagaagcgtctccactcgtcgcggcacatcatccgcctcatcaggtc 478
           |||||||||||||||||| | |||  |  ||||||||||||||||||||| |||||| ||
Sbjct: 823 gacttgctcggcggagaaccttctggagacgtcgcggcacatcatccgccgcatcagatc 764

                                                                       
Query: 479 cttggcggccggagacacgccggagaacagcctcggagggaaccgaacgctgccccgcat 538
           |||||| ||||| || || |||| |||||||   || |||||||  | |||||| |||| 
Sbjct: 763 cttggccgccggcgagaccccggcgaacagcgcgggcgggaacctgaggctgccgcgcag 704

                                   
Query: 539 cacggccgagagcacgtcctcggc 562
           |||||||| || ||||||| ||||
Sbjct: 703 cacggccgcgaacacgtccgcggc 680
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>gb|BT018640.1| Zea mays clone EL01N0504G05.d mRNA sequence
          Length = 1389

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                       
Query: 416 gaggacttgctcggcggagaagcgtctccactcgtcgcggcacatcatccgcctcatcag 475
           ||||||||||||| ||| ||| |  ||||||||||||||||| ||||| |||| ||||||
Sbjct: 853 gaggacttgctcgacggtgaacctcctccactcgtcgcggcagatcatgcgccgcatcag 794

                                                                       
Query: 476 gtccttggcggccggagacacgccggagaacagcctcggagggaaccgaacgctgccccg 535
           ||||| |||||| || ||||| |||  ||| ||||| || ||||| ||  ||||||| ||
Sbjct: 793 gtcctgggcggcgggcgacaccccgccgaagagcctgggcgggaagcgcgcgctgccgcg 734

                      
Query: 536 catcacggccg 546
           || ||||||||
Sbjct: 733 cagcacggccg 723



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                  
Query: 359  tcaggttggctgctccatcgctcgggctcctccgccgctcacgatccacgggtg 412
            |||||||||| ||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 1033 tcaggttggccgctccattgcccgggctcctccgccactcacgatccacgggtg 980
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 45      tgctgctgctgcatcatcatcc 66
               ||||||||||||||||||||||
Sbjct: 3169491 tgctgctgctgcatcatcatcc 3169470
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>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0068N01, complete sequence
          Length = 152233

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 44    ctgctgctgctgcatcatcatc 65
             ||||||||||||||||||||||
Sbjct: 63957 ctgctgctgctgcatcatcatc 63978
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>ref|XM_813237.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511217.100) partial mRNA
          Length = 3693

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 3280 ctgctgctgctgcatcatcatc 3259
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 45      tgctgctgctgcatcatcatcc 66
               ||||||||||||||||||||||
Sbjct: 3613146 tgctgctgctgcatcatcatcc 3613125
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 45      tgctgctgctgcatcatcatcc 66
               ||||||||||||||||||||||
Sbjct: 3402094 tgctgctgctgcatcatcatcc 3402073
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 45      tgctgctgctgcatcatcatcc 66
               ||||||||||||||||||||||
Sbjct: 3174377 tgctgctgctgcatcatcatcc 3174356
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 45      tgctgctgctgcatcatcatcc 66
               ||||||||||||||||||||||
Sbjct: 3175011 tgctgctgctgcatcatcatcc 3174990
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>gb|AC010042.8| Drosophila melanogaster 3L BAC RP98-5K6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 157225

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 44    ctgctgctgctgcatcatcatc 65
             ||||||||||||||||||||||
Sbjct: 41501 ctgctgctgctgcatcatcatc 41480
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>ref|NM_206299.1| Drosophila melanogaster Clock CG7391-RC, transcript variant C (Clk),
            mRNA
          Length = 3588

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 2581 ctgctgctgctgcatcatcatc 2560
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>ref|NM_170628.1| Drosophila melanogaster Clock CG7391-RB, transcript variant B (Clk),
            mRNA
          Length = 3576

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 2569 ctgctgctgctgcatcatcatc 2548
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>ref|NM_079240.2| Drosophila melanogaster Clock CG7391-RA, transcript variant A (Clk),
            mRNA
          Length = 3684

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 2677 ctgctgctgctgcatcatcatc 2656
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>ref|NM_001014576.1| Drosophila melanogaster Clock CG7391-RD, transcript variant D (Clk),
            mRNA
          Length = 3696

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 2689 ctgctgctgctgcatcatcatc 2668
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>ref|NM_001014575.1| Drosophila melanogaster Clock CG7391-RE, transcript variant E (Clk),
            mRNA
          Length = 3694

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 2687 ctgctgctgctgcatcatcatc 2666
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>ref|NM_001014574.1| Drosophila melanogaster Clock CG7391-RF, transcript variant F (Clk),
            mRNA
          Length = 3694

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 2687 ctgctgctgctgcatcatcatc 2666
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>gb|AC091225.2| Drosophila melanogaster 3L BAC RP98-34B24 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 174774

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 7243 ctgctgctgctgcatcatcatc 7264
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>ref|XM_687846.1| PREDICTED: Danio rerio similar to Nuclear receptor coactivator 3
            (NCoA-3) (Thyroid hormone receptor activator molecule 1)
            (TRAM-1) (ACTR) (Receptor-associated coactivator 3)
            (RAC-3) (Amplified in breast cancer-1 protein) (AIB-1)
            (Steroid receptor coactivator protein 3) (...
            (LOC564519), partial mRNA
          Length = 3997

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 3858 ctgctgctgctgcatcatcatc 3837
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>emb|BX296530.7| Zebrafish DNA sequence from clone DKEY-22H2 in linkage group 11, complete
              sequence
          Length = 153078

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 44     ctgctgctgctgcatcatcatc 65
              ||||||||||||||||||||||
Sbjct: 152401 ctgctgctgctgcatcatcatc 152380
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>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence
          Length = 151589

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 2108 ctgctgctgctgcatcatcatc 2129
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 44     ctgctgctgctgcatcatcatc 65
              ||||||||||||||||||||||
Sbjct: 402310 ctgctgctgctgcatcatcatc 402331
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 45      tgctgctgctgcatcatcatcc 66
               ||||||||||||||||||||||
Sbjct: 3158154 tgctgctgctgcatcatcatcc 3158133
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>gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28 of 83 of the
            complete sequence
          Length = 287988

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 1395 ctgctgctgctgcatcatcatc 1416
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>gb|AF067207.1|AF067207 Drosophila melanogaster CLOCK mRNA, complete cds
          Length = 3582

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 2675 ctgctgctgctgcatcatcatc 2654
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>dbj|D16557.1|ECOICC Escherichia coli gene for Icc protein, complete cds
          Length = 2360

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 45   tgctgctgctgcatcatcatcc 66
            ||||||||||||||||||||||
Sbjct: 1463 tgctgctgctgcatcatcatcc 1484
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>gb|AF069997.1|AF069997 Drosophila melanogaster CLOCK mRNA, complete cds
          Length = 3084

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 2319 ctgctgctgctgcatcatcatc 2298
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>gb|AF065133.1|AF065133 Drosophila melanogaster CLOCK (Clk) mRNA, complete cds
          Length = 3551

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 44   ctgctgctgctgcatcatcatc 65
            ||||||||||||||||||||||
Sbjct: 2568 ctgctgctgctgcatcatcatc 2547
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 45      tgctgctgctgcatcatcatcc 66
               ||||||||||||||||||||||
Sbjct: 3989764 tgctgctgctgcatcatcatcc 3989743
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 45      tgctgctgctgcatcatcatcc 66
               ||||||||||||||||||||||
Sbjct: 3922449 tgctgctgctgcatcatcatcc 3922428
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 45      tgctgctgctgcatcatcatcc 66
               ||||||||||||||||||||||
Sbjct: 2971184 tgctgctgctgcatcatcatcc 2971205
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>gb|U28377.1|ECU28377 Escherichia coli K-12 genome; approximately 65 to 68 minutes
          Length = 141744

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 45     tgctgctgctgcatcatcatcc 66
              ||||||||||||||||||||||
Sbjct: 130743 tgctgctgctgcatcatcatcc 130722
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 45      tgctgctgctgcatcatcatcc 66
               ||||||||||||||||||||||
Sbjct: 2894336 tgctgctgctgcatcatcatcc 2894315
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 45      tgctgctgctgcatcatcatcc 66
               ||||||||||||||||||||||
Sbjct: 3329864 tgctgctgctgcatcatcatcc 3329843
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>gb|AC102156.16| Mus musculus chromosome 18, clone RP23-334L7, complete sequence
          Length = 221632

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    tacaaaacctgctgctgctgc 56
             |||||||||||||||||||||
Sbjct: 11720 tacaaaacctgctgctgctgc 11740
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>ref|XM_514700.1| PREDICTED: Pan troglodytes LOC458308 (LOC458308), mRNA
          Length = 4464

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   ctgctgctgctgcatcatcat 64
            |||||||||||||||||||||
Sbjct: 3924 ctgctgctgctgcatcatcat 3904
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>gb|AY225363.1| Pan troglodytes nuclear receptor coactivator 3 (NCOA3) gene,
          partial cds
          Length = 131

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 44 ctgctgctgctgcatcatcat 64
          |||||||||||||||||||||
Sbjct: 49 ctgctgctgctgcatcatcat 29
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>gb|AF241732.1| Homo sapiens chromosome X clone XXcos-P117 map p11.4, complete
            sequence
          Length = 42930

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 84   acaacaaggagaaaacaaatt 104
            |||||||||||||||||||||
Sbjct: 5304 acaacaaggagaaaacaaatt 5284
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>gb|AF241731.2| Homo sapiens chromosome X clone LL0XNC01-45P13 map p11.4, complete
             sequence
          Length = 44977

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    acaacaaggagaaaacaaatt 104
             |||||||||||||||||||||
Sbjct: 24228 acaacaaggagaaaacaaatt 24208
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>gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, complete sequence
          Length = 198984

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    tacaaaacctgctgctgctgc 56
             |||||||||||||||||||||
Sbjct: 38055 tacaaaacctgctgctgctgc 38035
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>gb|AY462627.1| Plasmodium falciparum erythrocyte membrane protein 1 (var) mRNA,
           partial cds, CIDR1alpha region
          Length = 408

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  ctgctgctgcatcatcatcca 67
           |||||||||||||||||||||
Sbjct: 353 ctgctgctgcatcatcatcca 333
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 449     gtcgcggcacatcatccgcct 469
               |||||||||||||||||||||
Sbjct: 3994725 gtcgcggcacatcatccgcct 3994745
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>ref|NM_181659.1| Homo sapiens nuclear receptor coactivator 3 (NCOA3), transcript
            variant 1, mRNA
          Length = 7935

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   ctgctgctgctgcatcatcat 64
            |||||||||||||||||||||
Sbjct: 3958 ctgctgctgctgcatcatcat 3938
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>ref|NM_006534.2| Homo sapiens nuclear receptor coactivator 3 (NCOA3), transcript
            variant 2, mRNA
          Length = 7923

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   ctgctgctgctgcatcatcat 64
            |||||||||||||||||||||
Sbjct: 3946 ctgctgctgctgcatcatcat 3926
to top
>emb|AL034418.5|HS1049G16 Human DNA sequence from clone RP5-1049G16 on chromosome 20q12-13.2
             Contains the 3' end of the NCOA3 gene for nuclear receptor
             coactivator 3, an RPS3A (ribosomal protein S3A) pseudogene
             and the 3' end of the gene for a novel protein similar to
             glucosamine-6-sulfatases (SULF2) (sulfatase 2, H-SULF2,
             KIAA1247), complete sequence
          Length = 86453

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    ctgctgctgctgcatcatcat 64
             |||||||||||||||||||||
Sbjct: 67045 ctgctgctgctgcatcatcat 67025
to top
>gb|BC092516.1| Homo sapiens nuclear receptor coactivator 3, transcript variant 1,
            mRNA (cDNA clone MGC:104986 IMAGE:3064877), complete cds
          Length = 4807

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   ctgctgctgctgcatcatcat 64
            |||||||||||||||||||||
Sbjct: 3966 ctgctgctgctgcatcatcat 3946
to top
>gb|BC097784.1| Xenopus laevis cDNA clone MGC:115491 IMAGE:6868636, complete cds
          Length = 2376

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 42  acctgctgctgctgcatcatc 62
           |||||||||||||||||||||
Sbjct: 309 acctgctgctgctgcatcatc 289
to top
>gb|AC173996.2| Pan troglodytes chromosome X clone PTB-074P14 map human ortholog p11.4,
             complete sequence
          Length = 160565

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    acaacaaggagaaaacaaatt 104
             |||||||||||||||||||||
Sbjct: 76823 acaacaaggagaaaacaaatt 76803
to top
>gb|BC044297.1| Xenopus laevis, Similar to RIKEN cDNA 4732481H14 gene, clone
          IMAGE:5570087, mRNA
          Length = 2096

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 42 acctgctgctgctgcatcatc 62
          |||||||||||||||||||||
Sbjct: 22 acctgctgctgctgcatcatc 2
to top
>gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, complete sequence
          Length = 194165

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 36     tacaaaacctgctgctgctgc 56
              |||||||||||||||||||||
Sbjct: 148477 tacaaaacctgctgctgctgc 148497
to top
>ref|XM_564199.1| Anopheles gambiae str. PEST ENSANGP00000028013
           (ENSANGG00000022406), partial mRNA
          Length = 1731

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 45  tgctgctgctgcatcatcatc 65
           |||||||||||||||||||||
Sbjct: 764 tgctgctgctgcatcatcatc 744
to top
>emb|CR626902.14| Zebrafish DNA sequence from clone CH211-1F22 in linkage group 1, complete
              sequence
          Length = 130900

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 17     acactagcaatatacacagta 37
              |||||||||||||||||||||
Sbjct: 118132 acactagcaatatacacagta 118112
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 220     ccgtatcgacgccgtcggccggtgc 244
               |||||||||||||| ||||||||||
Sbjct: 2740212 ccgtatcgacgccggcggccggtgc 2740188
to top
>gb|AF016031.1|AF016031 Homo sapiens thyroid hormone receptor activator molecule (TRAM-1)
            mRNA, complete cds
          Length = 4668

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   ctgctgctgctgcatcatcat 64
            |||||||||||||||||||||
Sbjct: 3944 ctgctgctgctgcatcatcat 3924
to top
>gb|AF012108.1|AF012108 Homo sapiens Amplified in Breast Cancer (AIB1) mRNA, complete cds
          Length = 6835

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   ctgctgctgctgcatcatcat 64
            |||||||||||||||||||||
Sbjct: 3941 ctgctgctgctgcatcatcat 3921
to top
>gb|AF010227.1|AF010227 Homo sapiens receptor-associated coactivator 3 (RAC3) mRNA, complete
            cds
          Length = 4495

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   ctgctgctgctgcatcatcat 64
            |||||||||||||||||||||
Sbjct: 3826 ctgctgctgctgcatcatcat 3806
to top
>gb|AF023138.1|DVBIGB5 Drosophila virilis big brain (bib) gene, exon 4 and exon 5, complete
            cds
          Length = 3708

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   ctgctgctgctgcatcatcat 64
            |||||||||||||||||||||
Sbjct: 2442 ctgctgctgctgcatcatcat 2422
to top
>emb|BX908759.27| Zebrafish DNA sequence from clone DKEY-27J5 in linkage group 1, complete
              sequence
          Length = 231898

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     acactagcaatatacacagta 37
              |||||||||||||||||||||
Sbjct: 154663 acactagcaatatacacagta 154683
to top
>dbj|AB209863.1| Homo sapiens mRNA for nuclear receptor coactivator 3 isoform a
            variant protein
          Length = 5256

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   ctgctgctgctgcatcatcat 64
            |||||||||||||||||||||
Sbjct: 3948 ctgctgctgctgcatcatcat 3928
to top
>gb|BC086712.1| Danio rerio zgc:101641, mRNA (cDNA clone MGC:101641 IMAGE:7225745),
            complete cds
          Length = 2931

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   gctgctgctgcatcatcatc 65
            ||||||||||||||||||||
Sbjct: 1829 gctgctgctgcatcatcatc 1810
to top
>ref|NM_124872.2| Arabidopsis thaliana ATRBP45A; RNA binding AT5G54900 (ATRBP45A)
           mRNA, complete cds
          Length = 1413

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 44  ctgctgctgctgcatcatcatcca 67
           ||||||||| ||||||||||||||
Sbjct: 116 ctgctgctgttgcatcatcatcca 93
to top
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     acaaaacctgctgctgctgc 56
              ||||||||||||||||||||
Sbjct: 694833 acaaaacctgctgctgctgc 694814
to top
>gb|U80737.1|HSU80737 Homo sapiens CAGH16 mRNA, complete cds
          Length = 3487

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   tgctgctgctgcatcatcat 64
            ||||||||||||||||||||
Sbjct: 1155 tgctgctgctgcatcatcat 1136
to top
>gb|AY225364.1| Gorilla gorilla nuclear receptor coactivator 3 (NCOA3) gene,
          partial cds
          Length = 128

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 tgctgctgctgcatcatcat 64
          ||||||||||||||||||||
Sbjct: 48 tgctgctgctgcatcatcat 29
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 533     ccgcatcacggccgagagca 552
               ||||||||||||||||||||
Sbjct: 2772761 ccgcatcacggccgagagca 2772742
to top
>gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0034J04
              map S1466, complete sequence
          Length = 140012

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 83     cacaacaaggagaaaacaaattaa 106
              |||||||||||||||| |||||||
Sbjct: 102149 cacaacaaggagaaaaaaaattaa 102126
to top
>gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, complete sequence
          Length = 185681

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     caaggagaaaacaaattaag 107
              ||||||||||||||||||||
Sbjct: 123474 caaggagaaaacaaattaag 123455
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 510      ctcggagggaaccgaacgct 529
                ||||||||||||||||||||
Sbjct: 28251317 ctcggagggaaccgaacgct 28251336



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 83       cacaacaaggagaaaacaaattaa 106
                |||||||||||||||| |||||||
Sbjct: 22832218 cacaacaaggagaaaaaaaattaa 22832195
to top
>gb|AC139939.6| Mus musculus chromosome 1, clone RP23-458O23, complete sequence
          Length = 175033

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    actatctctctacttctctg 277
              ||||||||||||||||||||
Sbjct: 112899 actatctctctacttctctg 112918
to top
>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete
             sequence
          Length = 184783

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 83    cacaacaaggagaaaacaaattaa 106
             |||||||||||||||| |||||||
Sbjct: 34748 cacaacaaggagaaaaaaaattaa 34725
to top
>emb|AL590226.23| Human DNA sequence from clone RP11-251M1 on chromosome 9 Contains a
             novel gene, the gene for  NEU1 protein (ZNEU1), the AGPAT2
             gene for 1-acylglycerol-3-phosphate O-acyltransferase 2
             (lysophosphatidic acid acyltransferase, beta), the 5' end
             of the gene for a novel protein similar to mouse
             pancreatitis-induced protein 49 (PIP49), the 3' end of a
             novel gene (FLJ30346) and seven CpG islands, complete
             sequence
          Length = 149567

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   tctgcagagccggggcccca 293
             ||||||||||||||||||||
Sbjct: 71154 tctgcagagccggggcccca 71135
to top
>emb|BX294018.1|NCB8P8 Neurospora crassa DNA linkage group V BAC clone B8P8
          Length = 75910

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    catcatcatccatcatgcag 75
             ||||||||||||||||||||
Sbjct: 17454 catcatcatccatcatgcag 17435
to top
>emb|AJ851458.1| Gallus gallus mRNA for hypothetical protein, clone 3i15
          Length = 4456

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 cgctcgggctcctccgccgc 396
           ||||||||||||||||||||
Sbjct: 129 cgctcgggctcctccgccgc 110
to top
>gb|AC161929.4| Mus musculus chromosome 7, clone RP23-120D7, complete sequence
          Length = 193326

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     caaggagaaaacaaattaag 107
              ||||||||||||||||||||
Sbjct: 176837 caaggagaaaacaaattaag 176818
to top
>gb|AC087373.4| Homo sapiens chromosome 11, clone RP11-54J7, complete sequence
          Length = 200604

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   ctatctctctacttctctgc 278
             ||||||||||||||||||||
Sbjct: 15045 ctatctctctacttctctgc 15064
to top
>ref|XM_694520.1| PREDICTED: Danio rerio similar to BMP2 inducible kinase
           (LOC573854), mRNA
          Length = 3077

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 46  gctgctgctgcatcatcatc 65
           ||||||||||||||||||||
Sbjct: 931 gctgctgctgcatcatcatc 912
to top
>ref|XM_704579.1| PREDICTED: Danio rerio similar to BMP2 inducible kinase, transcript
            variant 2 (LOC573082), mRNA
          Length = 1824

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   gctgctgctgcatcatcatc 65
            ||||||||||||||||||||
Sbjct: 1441 gctgctgctgcatcatcatc 1422
to top
>ref|XM_689585.1| PREDICTED: Danio rerio similar to BMP2 inducible kinase, transcript
            variant 1 (LOC573082), mRNA
          Length = 3175

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   gctgctgctgcatcatcatc 65
            ||||||||||||||||||||
Sbjct: 2031 gctgctgctgcatcatcatc 2012
to top
>ref|NM_001012825.1| Gallus gallus RAS p21 protein activator 3 (RASA3), mRNA
          Length = 4456

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 cgctcgggctcctccgccgc 396
           ||||||||||||||||||||
Sbjct: 129 cgctcgggctcctccgccgc 110
to top
>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete
              sequence
          Length = 122497

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 510    ctcggagggaaccgaacgct 529
              ||||||||||||||||||||
Sbjct: 102458 ctcggagggaaccgaacgct 102477
to top
>gb|AC158522.2| Mus musculus BAC clone RP23-400N21 from chromosome 14, complete
            sequence
          Length = 209322

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 26   atatacacagtacaaaacct 45
            ||||||||||||||||||||
Sbjct: 2359 atatacacagtacaaaacct 2378
to top
>emb|BX640536.6| Zebrafish DNA sequence from clone CH211-191A6 in linkage group 5,
             complete sequence
          Length = 137923

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    gctgctgctgcatcatcatc 65
             ||||||||||||||||||||
Sbjct: 37207 gctgctgctgcatcatcatc 37226
to top
>gb|AF324983.2|AF324983 Arabidopsis thaliana AT5g54900 (AT5g54900/MBG8_17) mRNA, complete
           cds
          Length = 1395

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 44  ctgctgctgctgcatcatcatcca 67
           ||||||||| ||||||||||||||
Sbjct: 116 ctgctgctgttgcatcatcatcca 93
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 134      gctgctactgcttcttcact 153
                ||||||||||||||||||||
Sbjct: 16801183 gctgctactgcttcttcact 16801164
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 510      ctcggagggaaccgaacgct 529
                ||||||||||||||||||||
Sbjct: 28342641 ctcggagggaaccgaacgct 28342660



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 83       cacaacaaggagaaaacaaattaa 106
                |||||||||||||||| |||||||
Sbjct: 22825246 cacaacaaggagaaaaaaaattaa 22825223
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 126      tggagctagctgctactgct 145
                ||||||||||||||||||||
Sbjct: 38661393 tggagctagctgctactgct 38661374
to top
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1099D03
          Length = 191022

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    tggagctagctgctactgct 145
              ||||||||||||||||||||
Sbjct: 119366 tggagctagctgctactgct 119347
to top
>ref|NM_001008644.1| Danio rerio zgc:101641 (zgc:101641), mRNA
          Length = 2931

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   gctgctgctgcatcatcatc 65
            ||||||||||||||||||||
Sbjct: 1829 gctgctgctgcatcatcatc 1810
to top
>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1115_C05
          Length = 146585

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    gctgctactgcttcttcact 153
              ||||||||||||||||||||
Sbjct: 141095 gctgctactgcttcttcact 141076
to top
>dbj|AP003806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1103_E04
          Length = 111354

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   gctgctactgcttcttcact 153
             ||||||||||||||||||||
Sbjct: 17750 gctgctactgcttcttcact 17731
to top
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8
          Length = 80315

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 44    ctgctgctgctgcatcatcatcca 67
             ||||||||| ||||||||||||||
Sbjct: 54501 ctgctgctgttgcatcatcatcca 54478
to top
>emb|AL929264.4| Zebrafish DNA sequence from clone CH211-59C24 in linkage group 18,
            complete sequence
          Length = 171914

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 26   atatacacagtacaaaacct 45
            ||||||||||||||||||||
Sbjct: 5200 atatacacagtacaaaacct 5181
to top
>emb|X87329.1|PSPAF1 P.anserina car1 gene
          Length = 2204

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 44  ctgctgctgctgcatcatca 63
           ||||||||||||||||||||
Sbjct: 340 ctgctgctgctgcatcatca 359
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 471    atcaggtccttggcggccgg 490
              ||||||||||||||||||||
Sbjct: 878105 atcaggtccttggcggccgg 878124
to top
>emb|BX004805.6| Zebrafish DNA sequence from clone DKEY-196N8 in linkage group 5,
             complete sequence
          Length = 83537

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    gctgctgctgcatcatcatc 65
             ||||||||||||||||||||
Sbjct: 70171 gctgctgctgcatcatcatc 70190
to top
>gb|AF036892.1|AF036892 Homo sapiens nuclear receptor coactivator (ACTR) mRNA, complete cds
          Length = 6754

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   tgctgctgctgcatcatcat 64
            ||||||||||||||||||||
Sbjct: 3908 tgctgctgctgcatcatcat 3889


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,376,853
Number of Sequences: 3902068
Number of extensions: 4376853
Number of successful extensions: 102680
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101591
Number of HSP's gapped (non-prelim): 1088
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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