ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39k17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189389.1| Oryza sativa (japonica cultivar-group), predic... 234 3e-58
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
3dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
4gb|AC162614.2| Mus musculus chromosome 7, clone RP23-421O10, com... 48 0.038
5gb|AC119211.8| Mus musculus chromosome 7, clone RP24-191C15, com... 48 0.038
6gb|AF287967.1| Homo sapiens homeobox B7 (HOXB7) gene, partial cd... 44 0.59
7emb|X58431.1|HSHOX22 Human Hox2.2 gene for a homeobox protein 44 0.59
8emb|AJ270993.1|HSA270993 Homo sapiens mRNA for homeobox protein ... 44 0.59
9gb|AC103702.3| Homo sapiens chromosome 17, clone RP11-357H14, co... 44 0.59
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
11gb|AC009789.21|AC009789 Homo sapiens chromosome 17, clone RP11-3... 44 0.59
12dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
13emb|AJ325378.1|HSA325378 Homo sapiens genomic sequence surroundi... 44 0.59
14emb|AJ323647.1|HSA323647 Homo sapiens genomic sequence surroundi... 44 0.59
15gb|AC139638.14| Mus musculus chromosome 10, clone RP24-208F10, c... 42 2.3
16ref|NM_187558.1| Oryza sativa (japonica cultivar-group), predic... 42 2.3
17gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.3
18gb|AC156391.6| Mus musculus 10 BAC RP24-258P4 (Roswell Park Canc... 42 2.3
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
20gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
21dbj|AK073382.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
22emb|CR848789.11| Zebrafish DNA sequence from clone DKEYP-114B4 i... 42 2.3
23emb|AL589661.21| Mouse DNA sequence from clone RP23-58B7 on chro... 42 2.3
24gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene lo... 40 9.2
25gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome ... 40 9.2
26ref|XM_367690.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 9.2
27gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
28gb|AF475121.1| Triticum aestivum 19 kDa globulin mRNA, partial cds 40 9.2
29ref|XM_968653.1| PREDICTED: Tribolium castaneum similar to CG496... 40 9.2
30emb|Z93338.1|ASZ93338 A.simplex ksdI genes and three open readin... 40 9.2
31gb|AC124066.6| Homo sapiens chromosome 17, clone RP11-135L13, co... 40 9.2
32gb|BC037786.2| Homo sapiens cDNA clone IMAGE:4792109 40 9.2
33gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 9.2
34gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 9.2
35dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
36dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
37dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
38gb|AC110073.3| Homo sapiens BAC clone RP11-62A4 from 4, complete... 40 9.2
39gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
40dbj|BS000107.1| Pan troglodytes chromosome 22 clone:PTB-020H02, ... 40 9.2
41ref|NM_211275.1| Eremothecium gossypii AFR373Wp (AFR373W), mRNA 40 9.2
42emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 9.2
43emb|CR925751.6| Zebrafish DNA sequence from clone DKEY-264M23 in... 40 9.2
44gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
45emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119... 40 9.2
46emb|AL160492.5|HS162E17 Homo sapiens chromosome 17 sequence from... 40 9.2
47emb|AL772145.9| Mouse DNA sequence from clone RP23-212H4 on chro... 40 9.2
48dbj|D37969.1| Arthrobacter simplex ksdR, ksdD and ksdI genes for... 40 9.2 
>ref|NM_189389.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1083

 Score =  234 bits (118), Expect = 3e-58
 Identities = 220/254 (86%)
 Strand = Plus / Minus

                                                                        
Query: 262  agcctggccgtctcaaatgcgcagtagccaatcgcagcgaagcatgcgctgtgcaggacc 321
            ||||| |||||||| || |||||||| || | ||| |||||||| ||||||||||| |||
Sbjct: 1004 agcctcgccgtctcgaaggcgcagtatcccagcgcggcgaagcaagcgctgtgcagcacc 945

                                                                        
Query: 322  ctcggtccgatcccccgggacaggcccatcaggccttcctcggcgatgacctcctgcatc 381
            ||||| || ||||||||||||| ||||||||| || |||||||||| ||||||| |||| 
Sbjct: 944  ctcggaccaatcccccgggacaagcccatcagcccctcctcggcgacgacctcccgcatt 885

                                                                        
Query: 382  gtgcccacgaccgtgcggctcccctgggcgcccaccctggtcatcagccgcgtcttgacg 441
            || || || || ||||||||||||| || ||||||||||||||| || ||||||||||||
Sbjct: 884  gtcccaaccacggtgcggctcccctcggtgcccaccctggtcatgaggcgcgtcttgacg 825

                                                                        
Query: 442  acgtcgagcggggtggtgagccccgcggatatcgcgccggcgagggcgccgcagagcacg 501
            ||||||||||||||||||||| |||| ||||| || || ||||| |||||||| ||||| 
Sbjct: 824  acgtcgagcggggtggtgagcgccgccgatatggcccccgcgagagcgccgcacagcaca 765

                          
Query: 502  ctctcccccggcgt 515
            ||||| ||||||||
Sbjct: 764  ctctctcccggcgt 751



 Score =  182 bits (92), Expect = 1e-42
 Identities = 116/124 (93%)
 Strand = Plus / Minus

                                                                       
Query: 539 tgagggcgaaggccttgaggtactcgaaggaggagtagctgagcacgccggcggggaggt 598
           |||||| ||| |||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 727 tgagggtgaatgccttgaggtactcgaaggaggagtagctgaggacccccgcggggaggt 668

                                                                       
Query: 599 tgcggaggagcgtggcggcgtagcccgcgtagaggccgaagaagccgtcggtctggagga 658
           |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 667 tgcggaggagggtggcggcgtagccggcgtagaggccgaagaatccgtcggtctggagga 608

               
Query: 659 tctg 662
           ||||
Sbjct: 607 tctg 604
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  234 bits (118), Expect = 3e-58
 Identities = 220/254 (86%)
 Strand = Plus / Minus

                                                                            
Query: 262      agcctggccgtctcaaatgcgcagtagccaatcgcagcgaagcatgcgctgtgcaggacc 321
                ||||| |||||||| || |||||||| || | ||| |||||||| ||||||||||| |||
Sbjct: 42541062 agcctcgccgtctcgaaggcgcagtatcccagcgcggcgaagcaagcgctgtgcagcacc 42541003

                                                                            
Query: 322      ctcggtccgatcccccgggacaggcccatcaggccttcctcggcgatgacctcctgcatc 381
                ||||| || ||||||||||||| ||||||||| || |||||||||| ||||||| |||| 
Sbjct: 42541002 ctcggaccaatcccccgggacaagcccatcagcccctcctcggcgacgacctcccgcatt 42540943

                                                                            
Query: 382      gtgcccacgaccgtgcggctcccctgggcgcccaccctggtcatcagccgcgtcttgacg 441
                || || || || ||||||||||||| || ||||||||||||||| || ||||||||||||
Sbjct: 42540942 gtcccaaccacggtgcggctcccctcggtgcccaccctggtcatgaggcgcgtcttgacg 42540883

                                                                            
Query: 442      acgtcgagcggggtggtgagccccgcggatatcgcgccggcgagggcgccgcagagcacg 501
                ||||||||||||||||||||| |||| ||||| || || ||||| |||||||| ||||| 
Sbjct: 42540882 acgtcgagcggggtggtgagcgccgccgatatggcccccgcgagagcgccgcacagcaca 42540823

                              
Query: 502      ctctcccccggcgt 515
                ||||| ||||||||
Sbjct: 42540822 ctctctcccggcgt 42540809



 Score =  182 bits (92), Expect = 1e-42
 Identities = 116/124 (93%)
 Strand = Plus / Minus

                                                                            
Query: 539      tgagggcgaaggccttgaggtactcgaaggaggagtagctgagcacgccggcggggaggt 598
                |||||| ||| |||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 42540785 tgagggtgaatgccttgaggtactcgaaggaggagtagctgaggacccccgcggggaggt 42540726

                                                                            
Query: 599      tgcggaggagcgtggcggcgtagcccgcgtagaggccgaagaagccgtcggtctggagga 658
                |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 42540725 tgcggaggagggtggcggcgtagccggcgtagaggccgaagaatccgtcggtctggagga 42540666

                    
Query: 659      tctg 662
                ||||
Sbjct: 42540665 tctg 42540662
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>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0458E05
          Length = 193577

 Score =  234 bits (118), Expect = 3e-58
 Identities = 220/254 (86%)
 Strand = Plus / Minus

                                                                         
Query: 262   agcctggccgtctcaaatgcgcagtagccaatcgcagcgaagcatgcgctgtgcaggacc 321
             ||||| |||||||| || |||||||| || | ||| |||||||| ||||||||||| |||
Sbjct: 61945 agcctcgccgtctcgaaggcgcagtatcccagcgcggcgaagcaagcgctgtgcagcacc 61886

                                                                         
Query: 322   ctcggtccgatcccccgggacaggcccatcaggccttcctcggcgatgacctcctgcatc 381
             ||||| || ||||||||||||| ||||||||| || |||||||||| ||||||| |||| 
Sbjct: 61885 ctcggaccaatcccccgggacaagcccatcagcccctcctcggcgacgacctcccgcatt 61826

                                                                         
Query: 382   gtgcccacgaccgtgcggctcccctgggcgcccaccctggtcatcagccgcgtcttgacg 441
             || || || || ||||||||||||| || ||||||||||||||| || ||||||||||||
Sbjct: 61825 gtcccaaccacggtgcggctcccctcggtgcccaccctggtcatgaggcgcgtcttgacg 61766

                                                                         
Query: 442   acgtcgagcggggtggtgagccccgcggatatcgcgccggcgagggcgccgcagagcacg 501
             ||||||||||||||||||||| |||| ||||| || || ||||| |||||||| ||||| 
Sbjct: 61765 acgtcgagcggggtggtgagcgccgccgatatggcccccgcgagagcgccgcacagcaca 61706

                           
Query: 502   ctctcccccggcgt 515
             ||||| ||||||||
Sbjct: 61705 ctctctcccggcgt 61692



 Score =  182 bits (92), Expect = 1e-42
 Identities = 116/124 (93%)
 Strand = Plus / Minus

                                                                         
Query: 539   tgagggcgaaggccttgaggtactcgaaggaggagtagctgagcacgccggcggggaggt 598
             |||||| ||| |||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 61668 tgagggtgaatgccttgaggtactcgaaggaggagtagctgaggacccccgcggggaggt 61609

                                                                         
Query: 599   tgcggaggagcgtggcggcgtagcccgcgtagaggccgaagaagccgtcggtctggagga 658
             |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 61608 tgcggaggagggtggcggcgtagccggcgtagaggccgaagaatccgtcggtctggagga 61549

                 
Query: 659   tctg 662
             ||||
Sbjct: 61548 tctg 61545
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>gb|AC162614.2| Mus musculus chromosome 7, clone RP23-421O10, complete sequence
          Length = 219414

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 145   gattaccttcctgaaagaaggaaa 168
             ||||||||||||||||||||||||
Sbjct: 60146 gattaccttcctgaaagaaggaaa 60169
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>gb|AC119211.8| Mus musculus chromosome 7, clone RP24-191C15, complete sequence
          Length = 172286

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 145   gattaccttcctgaaagaaggaaa 168
             ||||||||||||||||||||||||
Sbjct: 21380 gattaccttcctgaaagaaggaaa 21357
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>gb|AF287967.1| Homo sapiens homeobox B7 (HOXB7) gene, partial cds; and homeobox B6
             (HOXB6), homeobox B5 (HOXB5), homeobox B4 (HOXB4), and
             homeobox B3 (HOXB3) genes, complete cds
          Length = 59339

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 397   cggctcccctgggcgcccaccc 418
             ||||||||||||||||||||||
Sbjct: 10214 cggctcccctgggcgcccaccc 10235
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>emb|X58431.1|HSHOX22 Human Hox2.2 gene for a homeobox protein
          Length = 2786

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 397 cggctcccctgggcgcccaccc 418
           ||||||||||||||||||||||
Sbjct: 761 cggctcccctgggcgcccaccc 782
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>emb|AJ270993.1|HSA270993 Homo sapiens mRNA for homeobox protein (Hox-2.2 gene)
          Length = 3324

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 397  cggctcccctgggcgcccaccc 418
            ||||||||||||||||||||||
Sbjct: 1425 cggctcccctgggcgcccaccc 1446
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>gb|AC103702.3| Homo sapiens chromosome 17, clone RP11-357H14, complete sequence
          Length = 187386

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 397   cggctcccctgggcgcccaccc 418
             ||||||||||||||||||||||
Sbjct: 91793 cggctcccctgggcgcccaccc 91814
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 593      ggaggttgcggaggagcgtggcggcg 618
                |||||| |||||||||||||||||||
Sbjct: 28810738 ggaggtggcggaggagcgtggcggcg 28810713
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>gb|AC009789.21|AC009789 Homo sapiens chromosome 17, clone RP11-361K8, complete sequence
          Length = 168215

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 397   cggctcccctgggcgcccaccc 418
             ||||||||||||||||||||||
Sbjct: 95660 cggctcccctgggcgcccaccc 95681
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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0028E05
          Length = 157631

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 593    ggaggttgcggaggagcgtggcggcg 618
              |||||| |||||||||||||||||||
Sbjct: 118513 ggaggtggcggaggagcgtggcggcg 118488
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>emb|AJ325378.1|HSA325378 Homo sapiens genomic sequence surrounding NotI site, clone NB6-632R
          Length = 911

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 397 cggctcccctgggcgcccaccc 418
           ||||||||||||||||||||||
Sbjct: 470 cggctcccctgggcgcccaccc 491
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>emb|AJ323647.1|HSA323647 Homo sapiens genomic sequence surrounding NotI site, clone NB6-907R
          Length = 687

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 397 cggctcccctgggcgcccaccc 418
           ||||||||||||||||||||||
Sbjct: 470 cggctcccctgggcgcccaccc 491
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>gb|AC139638.14| Mus musculus chromosome 10, clone RP24-208F10, complete sequence
          Length = 154570

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 588    ggcggggaggttgcggaggag 608
              |||||||||||||||||||||
Sbjct: 139335 ggcggggaggttgcggaggag 139355
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>ref|NM_187558.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1392

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 584 cgccggcggggaggttgcggaggag 608
           |||||||| ||||||||||||||||
Sbjct: 184 cgccggcgaggaggttgcggaggag 160
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 584     cgccggcggggaggttgcggaggag 608
               |||||||| ||||||||||||||||
Sbjct: 1001427 cgccggcgaggaggttgcggaggag 1001403



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 353     ggccttcctcggcgatgacc 372
               ||||||||||||||||||||
Sbjct: 8056348 ggccttcctcggcgatgacc 8056329
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>gb|AC156391.6| Mus musculus 10 BAC RP24-258P4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 186703

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 155    ctgaaagaaggaaaggaatcg 175
              |||||||||||||||||||||
Sbjct: 143066 ctgaaagaaggaaaggaatcg 143046
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 584     cgccggcggggaggttgcggaggag 608
               |||||||| ||||||||||||||||
Sbjct: 1001425 cgccggcgaggaggttgcggaggag 1001401



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 353     ggccttcctcggcgatgacc 372
               ||||||||||||||||||||
Sbjct: 8054183 ggccttcctcggcgatgacc 8054164
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>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11,
             complete sequence
          Length = 126827

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 584   cgccggcggggaggttgcggaggag 608
             |||||||| ||||||||||||||||
Sbjct: 21642 cgccggcgaggaggttgcggaggag 21618
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>dbj|AK073382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030H10, full
           insert sequence
          Length = 1807

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 584 cgccggcggggaggttgcggaggag 608
           |||||||| ||||||||||||||||
Sbjct: 287 cgccggcgaggaggttgcggaggag 263
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>emb|CR848789.11| Zebrafish DNA sequence from clone DKEYP-114B4 in linkage group 16,
             complete sequence
          Length = 195410

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 37    taattgaaattaaaatgatgc 57
             |||||||||||||||||||||
Sbjct: 73894 taattgaaattaaaatgatgc 73914
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>emb|AL589661.21| Mouse DNA sequence from clone RP23-58B7 on chromosome 15, complete
             sequence
          Length = 241432

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 588   ggcggggaggttgcggaggag 608
             |||||||||||||||||||||
Sbjct: 23456 ggcggggaggttgcggaggag 23476
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>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence
          Length = 307015

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 473   tcgcgccggcgagggcgccg 492
             ||||||||||||||||||||
Sbjct: 47436 tcgcgccggcgagggcgccg 47455
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>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0043I04, complete sequence
          Length = 145191

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    taattgaaattaaaatgatg 56
             ||||||||||||||||||||
Sbjct: 89086 taattgaaattaaaatgatg 89105
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>ref|XM_367690.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
            (MG07601.4) partial mRNA
          Length = 3315

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 429  ccgcgtcttgacgacgtcga 448
            ||||||||||||||||||||
Sbjct: 2502 ccgcgtcttgacgacgtcga 2483
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>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02,
             complete sequence
          Length = 127642

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 629   agaggccgaagaagccgtcg 648
             ||||||||||||||||||||
Sbjct: 62921 agaggccgaagaagccgtcg 62902
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>gb|AF475121.1| Triticum aestivum 19 kDa globulin mRNA, partial cds
          Length = 726

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 473 tcgcgccggcgagggcgccg 492
           ||||||||||||||||||||
Sbjct: 201 tcgcgccggcgagggcgccg 220
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>ref|XM_968653.1| PREDICTED: Tribolium castaneum similar to CG4963-PA (LOC662563),
           mRNA
          Length = 1125

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 441 gacgtcgagcggggtggtga 460
           ||||||||||||||||||||
Sbjct: 717 gacgtcgagcggggtggtga 698
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>emb|Z93338.1|ASZ93338 A.simplex ksdI genes and three open reading frames
          Length = 3289

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 473 tcgcgccggcgagggcgccg 492
           ||||||||||||||||||||
Sbjct: 230 tcgcgccggcgagggcgccg 211
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>gb|AC124066.6| Homo sapiens chromosome 17, clone RP11-135L13, complete sequence
          Length = 160380

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 106   agatggctacaagaaaactgcaca 129
             |||||||||||| |||||||||||
Sbjct: 99542 agatggctacaacaaaactgcaca 99565
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>gb|BC037786.2| Homo sapiens cDNA clone IMAGE:4792109
          Length = 1205

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 agatggctacaagaaaactgcaca 129
           |||||||||||| |||||||||||
Sbjct: 546 agatggctacaacaaaactgcaca 569
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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
               complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 426     cagccgcgtcttgacgacgtcgag 449
               |||||||||||||| |||||||||
Sbjct: 1112910 cagccgcgtcttgatgacgtcgag 1112887
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 480     ggcgagggcgccgcagagca 499
               ||||||||||||||||||||
Sbjct: 2529221 ggcgagggcgccgcagagca 2529240
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 353      ggccttcctcggcgatgacc 372
                ||||||||||||||||||||
Sbjct: 27407650 ggccttcctcggcgatgacc 27407631
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 37       taattgaaattaaaatgatg 56
                ||||||||||||||||||||
Sbjct: 21743066 taattgaaattaaaatgatg 21743085
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 629      agaggccgaagaagccgtcg 648
                ||||||||||||||||||||
Sbjct: 23782100 agaggccgaagaagccgtcg 23782081
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>gb|AC110073.3| Homo sapiens BAC clone RP11-62A4 from 4, complete sequence
          Length = 130088

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    taattgaaattaaaatgatg 56
             ||||||||||||||||||||
Sbjct: 42746 taattgaaattaaaatgatg 42765
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>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10,
              complete sequence
          Length = 143298

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 353    ggccttcctcggcgatgacc 372
              ||||||||||||||||||||
Sbjct: 123711 ggccttcctcggcgatgacc 123692
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>dbj|BS000107.1| Pan troglodytes chromosome 22 clone:PTB-020H02, map 22, complete
             sequences
          Length = 145633

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    aaattaaaatgatgctgaag 62
             ||||||||||||||||||||
Sbjct: 28087 aaattaaaatgatgctgaag 28068
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>ref|NM_211275.1| Eremothecium gossypii AFR373Wp (AFR373W), mRNA
          Length = 1404

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 426 cagccgcgtcttgacgacgtcgag 449
           |||||||||||||| |||||||||
Sbjct: 891 cagccgcgtcttgatgacgtcgag 868
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 635     cgaagaagccgtcggtctgg 654
               ||||||||||||||||||||
Sbjct: 2659025 cgaagaagccgtcggtctgg 2659044
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>emb|CR925751.6| Zebrafish DNA sequence from clone DKEY-264M23 in linkage group 10,
             complete sequence
          Length = 111720

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ttgaaattaaaatgatgctg 59
             ||||||||||||||||||||
Sbjct: 51083 ttgaaattaaaatgatgctg 51064
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 353      ggccttcctcggcgatgacc 372
                ||||||||||||||||||||
Sbjct: 27333250 ggccttcctcggcgatgacc 27333231
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>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124605

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   ggccttcctcggcgatgacc 372
             ||||||||||||||||||||
Sbjct: 75970 ggccttcctcggcgatgacc 75951
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>emb|AL160492.5|HS162E17 Homo sapiens chromosome 17 sequence from PAC RPCI-1 162E17 region
             D17S842-D17S953 map 17p11.2, complete sequence
          Length = 124940

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   agatggctacaagaaaactgcaca 129
             |||||||||||| |||||||||||
Sbjct: 14637 agatggctacaacaaaactgcaca 14614
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>emb|AL772145.9| Mouse DNA sequence from clone RP23-212H4 on chromosome 3, complete
              sequence
          Length = 228623

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    ctagatggctacaagaaaac 123
              ||||||||||||||||||||
Sbjct: 110465 ctagatggctacaagaaaac 110446
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>dbj|D37969.1| Arthrobacter simplex ksdR, ksdD and ksdI genes for hypothetic
            regulatory protein, 3-ketosteroid-1-dehydrogenase and
            3-ketosteroid-5-isomerase
          Length = 3630

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 473  tcgcgccggcgagggcgccg 492
            ||||||||||||||||||||
Sbjct: 3156 tcgcgccggcgagggcgccg 3137


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,762,190
Number of Sequences: 3902068
Number of extensions: 5762190
Number of successful extensions: 119498
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118895
Number of HSP's gapped (non-prelim): 603
length of query: 670
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 647
effective length of database: 17,143,297,704
effective search space: 11091713614488
effective search space used: 11091713614488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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