>gb|AY106592.1| Zea mays PCO063726 mRNA sequence
          Length = 752

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 500 aattagcaaaactgagctgcatttgttgt 528
           |||||||||||||||||||||||||||||
Sbjct: 224 aattagcaaaactgagctgcatttgttgt 196

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 395     taatccagatatgttccttgtggcctgtagcatgtccctacaa 437
               ||||||||||||||||||||||   |||||||||  |||||||
Sbjct: 9377104 taatccagatatgttccttgtgatatgtagcatggtcctacaa 9377062



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 174     gatgaaatttccaagaatgcccacaa 199
               |||||||||||||||||||| |||||
Sbjct: 9377332 gatgaaatttccaagaatgctcacaa 9377307

>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 395   taatccagatatgttccttgtggcctgtagcatgtccctacaa 437
             ||||||||||||||||||||||   |||||||||  |||||||
Sbjct: 74504 taatccagatatgttccttgtgatatgtagcatggtcctacaa 74462



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 174   gatgaaatttccaagaatgcccacaa 199
             |||||||||||||||||||| |||||
Sbjct: 74732 gatgaaatttccaagaatgctcacaa 74707

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 395     taatccagatatgttccttgtggcctgtagcatgtccctacaa 437
               ||||||||||||||||||||||   |||||||||  |||||||
Sbjct: 9375225 taatccagatatgttccttgtgatatgtagcatggtcctacaa 9375183



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 174     gatgaaatttccaagaatgcccacaa 199
               |||||||||||||||||||| |||||
Sbjct: 9375453 gatgaaatttccaagaatgctcacaa 9375428

>dbj|AK058992.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F09, full
           insert sequence
          Length = 1002

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 395 taatccagatatgttccttgtggcctgtagcatgtccctacaa 437
           ||||||||||||||||||||||   |||||||||  |||||||
Sbjct: 992 taatccagatatgttccttgtgatatgtagcatggtcctacaa 950

>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome
          Length = 1471282

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 282    tattgagcaggctggctacaaacctt 307
              ||||||| ||||||||||||||||||
Sbjct: 718305 tattgagaaggctggctacaaacctt 718280

>gb|AC155654.16| Mus musculus 6 BAC RP24-192P21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 147486

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 172    tggatgaaatttccaagaatgccca 196
              |||||||||||| ||||||||||||
Sbjct: 103390 tggatgaaattttcaagaatgccca 103366

>gb|AC011731.8|AC011731 Homo sapiens, clone RP11-17J14, complete sequence
          Length = 157183

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 428   gtccctacaattccacagctg 448
             |||||||||||||||||||||
Sbjct: 77479 gtccctacaattccacagctg 77499

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 99       aaatgctaataaaacaatata 119
                |||||||||||||||||||||
Sbjct: 18602704 aaatgctaataaaacaatata 18602684

>gb|AC012445.6| Homo sapiens BAC clone RP11-86A21 from 2, complete sequence
          Length = 203428

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    ttcaaatgctaataaaacaat 116
             |||||||||||||||||||||
Sbjct: 42650 ttcaaatgctaataaaacaat 42630

>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 162     actccttccttggatgaaatt 182
               |||||||||||||||||||||
Sbjct: 2876474 actccttccttggatgaaatt 2876454

>dbj|AP003276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0516D04
          Length = 140491

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 99    aaatgctaataaaacaatata 119
             |||||||||||||||||||||
Sbjct: 25977 aaatgctaataaaacaatata 25957

>gb|AC153915.5| Mus musculus 10 BAC RP23-329D23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 207169

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 172    tggatgaaatttccaagaatgccca 196
              |||||||||||| ||||||||||||
Sbjct: 170184 tggatgaaattttcaagaatgccca 170208

>gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0032M21 map C83B, complete sequence
          Length = 48636

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   aaagataatacacaatgtat 358
             ||||||||||||||||||||
Sbjct: 15319 aaagataatacacaatgtat 15300

>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10
              map R2918, complete sequence
          Length = 149132

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    aaagataatacacaatgtat 358
              ||||||||||||||||||||
Sbjct: 132976 aaagataatacacaatgtat 132957

>emb|AL450064.4| Human DNA sequence from clone RP11-134K4 on chromosome 13, complete
             sequence
          Length = 61008

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 164   tccttccttggatgaaatttccaa 187
             ||||||||| ||||||||||||||
Sbjct: 11994 tccttcctttgatgaaatttccaa 11971

>emb|AL358612.9| Human DNA sequence from clone RP11-435M3 on chromosome 10 Contains the
             5' end of the MYO3A gene for myosin IIIA, a novel gene and
             a CpG island, complete sequence
          Length = 174021

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    tcaaatgctaataaaacaat 116
             ||||||||||||||||||||
Sbjct: 63200 tcaaatgctaataaaacaat 63181

>emb|AL808129.8| Zebrafish DNA sequence from clone CH211-255F14 in linkage group 8
             Contains a novel gene for a protein similar to chicken and
             human RIM binding protein 2 (KIAA0318) and three CpG
             islands, complete sequence
          Length = 157330

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    ttgatgacagattgtttaca 43
             ||||||||||||||||||||
Sbjct: 48668 ttgatgacagattgtttaca 48687

>emb|BX088558.3| Mouse DNA sequence from clone RP23-252M5 on chromosome 4, complete
             sequence
          Length = 122069

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 444   agctgccaacttccaactagcaga 467
             |||||||||||| |||||||||||
Sbjct: 27046 agctgccaacttacaactagcaga 27069

>gb|AC093816.3| Homo sapiens BAC clone RP11-364P2 from 4, complete sequence
          Length = 170227

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 130    aacatggacaaatcctacaaacac 153
              |||||||||||||| |||||||||
Sbjct: 122497 aacatggacaaatcttacaaacac 122520

>gb|AC023122.9| Homo sapiens BAC clone RP11-297L21 from 3, complete sequence
          Length = 178642

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    taataaaacaatatagtacc 124
              ||||||||||||||||||||
Sbjct: 124627 taataaaacaatatagtacc 124646

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 339     aaagataatacacaatgtat 358
               ||||||||||||||||||||
Sbjct: 2480879 aaagataatacacaatgtat 2480860

>gb|AC117709.16| Mus musculus chromosome 8, clone RP23-475N7, complete sequence
          Length = 187186

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   ccagagtattgcacagatgg 276
             ||||||||||||||||||||
Sbjct: 53954 ccagagtattgcacagatgg 53973

>emb|CR846099.7| Zebrafish DNA sequence from clone DKEY-182M23 in linkage group 12,
             complete sequence
          Length = 140422

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   gataatacacaatgtattcc 361
             ||||||||||||||||||||
Sbjct: 94351 gataatacacaatgtattcc 94370

>emb|CR956421.19| Pig DNA sequence from clone PigE-225A14 on chromosome 6, complete
              sequence
          Length = 127959

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 64     tgcactcgccttccagcaatttct 87
              ||||||||||||||||||| ||||
Sbjct: 117556 tgcactcgccttccagcaaattct 117579

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 339     aaagataatacacaatgtat 358
               ||||||||||||||||||||
Sbjct: 2489953 aaagataatacacaatgtat 2489934


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,398,510
Number of Sequences: 3902068
Number of extensions: 5398510
Number of successful extensions: 99459
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99203
Number of HSP's gapped (non-prelim): 256
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)