>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 79       caaacaggcaaagcacgtacgtac 102
                ||||| ||||||||||||||||||
Sbjct: 29256941 caaaccggcaaagcacgtacgtac 29256918

>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0692C11
          Length = 169562

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    caaacaggcaaagcacgtacgtac 102
             ||||| ||||||||||||||||||
Sbjct: 35804 caaaccggcaaagcacgtacgtac 35781

>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0684B02
          Length = 132470

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 79     caaacaggcaaagcacgtacgtac 102
              ||||| ||||||||||||||||||
Sbjct: 102728 caaaccggcaaagcacgtacgtac 102705

>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    gcgcgtgccggtgccgatct 148
              ||||||||||||||||||||
Sbjct: 452195 gcgcgtgccggtgccgatct 452176

>gb|AC102418.9| Mus musculus chromosome 3, clone RP24-499L10, complete sequence
          Length = 208274

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 7      tcttgtttttcataaggca 25
              |||||||||||||||||||
Sbjct: 200974 tcttgtttttcataaggca 200992

>ref|XM_467423.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1397

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 145  atctagtcgtcgtcctcgccgctgatg 171
            |||| ||||||||| ||||||||||||
Sbjct: 1006 atcttgtcgtcgtcgtcgccgctgatg 1032

>ref|NM_186246.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 930

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 150 gtcgtcgtcctcgccgctgatga 172
           ||||||||||||| |||||||||
Sbjct: 582 gtcgtcgtcctcgtcgctgatga 560

>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 143    cgatctagtcgtcgtcctcgccg 165
              |||||||||||||||||| ||||
Sbjct: 358572 cgatctagtcgtcgtcctggccg 358550

>ref|XM_773312.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_291_31994_37297) partial mRNA
          Length = 5304

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 59  ccaaggtctcacgaacaca 77
           |||||||||||||||||||
Sbjct: 301 ccaaggtctcacgaacaca 283

>gb|AC129544.7| Mus musculus chromosome 12, clone RP23-258H6, complete sequence
          Length = 232275

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      cttgtttttcataaggcaa 26
              |||||||||||||||||||
Sbjct: 155877 cttgtttttcataaggcaa 155895

>gb|AC163445.3| Mus musculus chromosome 3, clone RP24-304A4, complete sequence
          Length = 175181

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     tcttgtttttcataaggca 25
             |||||||||||||||||||
Sbjct: 43273 tcttgtttttcataaggca 43291

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 122     agcattcgcgcgtgccggt 140
               |||||||||||||||||||
Sbjct: 3773545 agcattcgcgcgtgccggt 3773563

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 123     gcattcgcgcgtgccggtg 141
               |||||||||||||||||||
Sbjct: 3031856 gcattcgcgcgtgccggtg 3031838

>emb|AJ431208.2|AXY431208 Alcaligenes xylosoxidans partial gene for putative L-sorbosone
            dehydrogenase, azu-1 gene, & gene for putative
            oxidoreductase
          Length = 4098

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 156  gtcctcgccgctgatgaacttgc 178
            ||||||| |||||||||||||||
Sbjct: 2800 gtcctcggcgctgatgaacttgc 2778

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 150     gtcgtcgtcctcgccgctgatga 172
               ||||||||||||| |||||||||
Sbjct: 2167840 gtcgtcgtcctcgtcgctgatga 2167818

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                           
Query: 145      atctagtcgtcgtcctcgccgctgatg 171
                |||| ||||||||| ||||||||||||
Sbjct: 29441091 atcttgtcgtcgtcgtcgccgctgatg 29441117

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 58     cccaaggtctcacgaacac 76
              |||||||||||||||||||
Sbjct: 391422 cccaaggtctcacgaacac 391404

>gb|AC092855.39| Mus musculus strain C57BL/6J chromosome 3 clone rp23-49o17, complete
              sequence
          Length = 249205

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      tagctcttgtttttcataa 21
              |||||||||||||||||||
Sbjct: 129890 tagctcttgtttttcataa 129908

>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1038_A06
          Length = 147836

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 145   atctagtcgtcgtcctcgccgctgatg 171
             |||| ||||||||| ||||||||||||
Sbjct: 36121 atcttgtcgtcgtcgtcgccgctgatg 36147

>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1311_H06
          Length = 139868

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 145   atctagtcgtcgtcctcgccgctgatg 171
             |||| ||||||||| ||||||||||||
Sbjct: 91963 atcttgtcgtcgtcgtcgccgctgatg 91989

>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 150   gtcgtcgtcctcgccgctgatga 172
             ||||||||||||| |||||||||
Sbjct: 35742 gtcgtcgtcctcgtcgctgatga 35720

>dbj|AK109662.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-H06, full
            insert sequence
          Length = 1397

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 145  atctagtcgtcgtcctcgccgctgatg 171
            |||| ||||||||| ||||||||||||
Sbjct: 1006 atcttgtcgtcgtcgtcgccgctgatg 1032

>gb|AC155260.2| Mus musculus BAC clone RP24-71G3 from 12, complete sequence
          Length = 190003

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 8      cttgtttttcataaggcaa 26
              |||||||||||||||||||
Sbjct: 159413 cttgtttttcataaggcaa 159395

>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 101     acgtacaattaatggccaaaaag 123
               |||||||||||||||||| ||||
Sbjct: 4471382 acgtacaattaatggccataaag 4471360


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,204,944
Number of Sequences: 3902068
Number of extensions: 1204944
Number of successful extensions: 95093
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94657
Number of HSP's gapped (non-prelim): 436
length of query: 179
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 157
effective length of database: 17,147,199,772
effective search space: 2692110364204
effective search space used: 2692110364204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)