>ref|XM_468019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2127

 Score =  105 bits (53), Expect = 2e-19
 Identities = 134/161 (83%)
 Strand = Plus / Minus

                                                                        
Query: 413  aggatgatcttgactagtatacttctgagctccttcacaagaggaggtatgccgcgttcc 472
            |||||||| |||||||| |||| || | |  ||||||||||||| ||||||| | |  ||
Sbjct: 2073 aggatgattttgactagaatacctccgtgtgccttcacaagaggtggtatgctgtgcacc 2014

                                                                        
Query: 473  atttaaggcgcgggataggcgccagagaagaacttctatgtgattgtaaatgctgagccg 532
            | ||||  | || |||||||| | |||||  ||||  ||||| ||||||||||| |||||
Sbjct: 2013 agttaaaacacgagataggcgtcggagaaatacttgaatgtggttgtaaatgctaagccg 1954

                                                     
Query: 533  atgcctattgcacgttgaaaagaaggcaacaaaaccataca 573
            |||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 1953 atgcctgttgcatgttgaaaagaaggcaacaaaaccataca 1913

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                              
Query: 528      agccgatgcctattgcacgttgaaaagaaggcaacaaaaccataca 573
                ||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 32595198 agccgatgcctgttgcatgttgaaaagaaggcaacaaaaccataca 32595243



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                    
Query: 413      aggatgatcttgactagtatacttctgagctccttcacaagaggaggtatgc 464
                |||||||| |||||||| |||| || | |  ||||||||||||| |||||||
Sbjct: 32594795 aggatgattttgactagaatacctccgtgtgccttcacaagaggtggtatgc 32594846

>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1611_C08
          Length = 135386

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                           
Query: 528   agccgatgcctattgcacgttgaaaagaaggcaacaaaaccataca 573
             ||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 22569 agccgatgcctgttgcatgttgaaaagaaggcaacaaaaccataca 22614



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                 
Query: 413   aggatgatcttgactagtatacttctgagctccttcacaagaggaggtatgc 464
             |||||||| |||||||| |||| || | |  ||||||||||||| |||||||
Sbjct: 22166 aggatgattttgactagaatacctccgtgtgccttcacaagaggtggtatgc 22217

>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1353_F08
          Length = 101988

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                           
Query: 528   agccgatgcctattgcacgttgaaaagaaggcaacaaaaccataca 573
             ||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 92171 agccgatgcctgttgcatgttgaaaagaaggcaacaaaaccataca 92216



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                 
Query: 413   aggatgatcttgactagtatacttctgagctccttcacaagaggaggtatgc 464
             |||||||| |||||||| |||| || | |  ||||||||||||| |||||||
Sbjct: 91768 aggatgattttgactagaatacctccgtgtgccttcacaagaggtggtatgc 91819

>gb|AY110369.1| Zea mays CL10716_1 mRNA sequence
          Length = 1027

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 510 atgtgattgtaaatgctgagccgatgcctatt 541
           |||||||||||||||||||| || ||||||||
Sbjct: 586 atgtgattgtaaatgctgagtcggtgcctatt 617

>gb|AC162944.4| Mus musculus BAC clone RP23-76L8 from chromosome 13, complete sequence
          Length = 155927

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 494   ccagagaagaacttctatgtg 514
             |||||||||||||||||||||
Sbjct: 40138 ccagagaagaacttctatgtg 40158

>gb|AC165366.2| Mus musculus BAC clone RP23-51H15 from chromosome 13, complete sequence
          Length = 241514

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 494   ccagagaagaacttctatgtg 514
             |||||||||||||||||||||
Sbjct: 24875 ccagagaagaacttctatgtg 24855

>gb|AC145165.9| Medicago truncatula clone mth2-4j24, complete sequence
          Length = 128074

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     ctcactcatatacttacaaaa 29
             |||||||||||||||||||||
Sbjct: 13559 ctcactcatatacttacaaaa 13579

>gb|AC091464.8| Mus musculus chromosome 14, clone RP23-97N1, complete sequence
          Length = 237814

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   tagggtcacttgatgaaaca 235
             ||||||||||||||||||||
Sbjct: 93279 tagggtcacttgatgaaaca 93260

>emb|CR361566.15| Zebrafish DNA sequence from clone CH211-248E11 in linkage group 8,
              complete sequence
          Length = 182427

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     caacatattacattacatca 103
              ||||||||||||||||||||
Sbjct: 170863 caacatattacattacatca 170882

>emb|CR339046.11| Zebrafish DNA sequence from clone CH211-112C15 in linkage group 23,
             complete sequence
          Length = 170974

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    aacctaccaacatattacat 96
             ||||||||||||||||||||
Sbjct: 99124 aacctaccaacatattacat 99143

>gb|AC094019.2| Homo sapiens chromosome 3 clone RP11-345J6, complete sequence
          Length = 198146

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 275   gtaagctccttgtggatgtccatg 298
             ||||||||||||||| ||||||||
Sbjct: 46750 gtaagctccttgtggctgtccatg 46727

>gb|AC096750.3| Homo sapiens BAC clone RP11-426F15 from 4, complete sequence
          Length = 159618

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   tcacttgatgaaacattaca 240
             ||||||||||||||||||||
Sbjct: 71796 tcacttgatgaaacattaca 71815

>dbj|BS000167.1| Pan troglodytes chromosome 22 clone:PTB-022L04, map 22, partial
             sequences, complete sequence
          Length = 10568

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   agggtcacttgatgaaacat 236
             ||||||||||||||||||||
Sbjct: 10371 agggtcacttgatgaaacat 10390

>dbj|BS000168.2| Pan troglodytes chromosome 22 clone:RP43-021P14, map 22, complete
            sequences
          Length = 184554

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  agggtcacttgatgaaacat 236
            ||||||||||||||||||||
Sbjct: 1808 agggtcacttgatgaaacat 1827

>emb|AL606906.18| Mouse DNA sequence from clone RP23-121J14 on chromosome 4, complete
              sequence
          Length = 198772

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 551    aaagaaggcaacaaaaccat 570
              ||||||||||||||||||||
Sbjct: 172172 aaagaaggcaacaaaaccat 172153


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,833,843
Number of Sequences: 3902068
Number of extensions: 4833843
Number of successful extensions: 98443
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98346
Number of HSP's gapped (non-prelim): 96
length of query: 574
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 551
effective length of database: 17,143,297,704
effective search space: 9445957034904
effective search space used: 9445957034904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)