ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39h18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467113.1| Oryza sativa (japonica cultivar-group), mRNA 244 3e-61
2dbj|AK120854.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
3dbj|AK101560.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
4gb|AY104814.1| Zea mays PCO089410 mRNA sequence 133 8e-28
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
6dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
7dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
8emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 111 3e-21
9gb|AC138114.3| Mus musculus BAC clone RP24-247F6 from chromosome... 44 0.56
10gb|AC121855.3| Mus musculus BAC clone RP24-97C18 from chromosome... 44 0.56
11gb|AE013144.1| Thermoanaerobacter tengcongensis MB4, section 171... 42 2.2
12gb|AY268954.1| Thermoanaerobacter tengcongensis alpha-glucosidas... 42 2.2
13gb|DQ019468.1| Lilium longiflorum clone LP17 unknown mRNA 42 2.2
14emb|AL935199.4| Zebrafish DNA sequence from clone CH211-241L3, c... 42 2.2
15emb|AL929058.4| Zebrafish DNA sequence from clone DKEY-69H9 in l... 42 2.2
16gb|AC168091.3| Mus musculus BAC clone RP23-163F18 from chromosom... 40 8.8
17gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 40 8.8
18gb|AC166105.4| Mus musculus BAC clone RP23-251L22 from chromosom... 40 8.8
19gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 40 8.8
20gb|AC116778.9| Mus musculus chromosome 1, clone RP24-481H3, comp... 40 8.8
21gb|AC158940.8| Mus musculus chromosome 1, clone RP24-284D7, comp... 40 8.8
22gb|AC158520.2| Mus musculus BAC clone RP23-434P22 from chromosom... 40 8.8
23emb|AJ459965.1|ECA459965 Equus caballus CRISP3 gene for cysteine... 40 8.8
24ref|XM_726115.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 8.8
25ref|XM_728080.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 8.8
26gb|AC117644.6| Mus musculus chromosome 7, clone RP23-238L7, comp... 40 8.8
27emb|AL731551.9| Human DNA sequence from clone RP11-337F21 on chr... 40 8.8
28ref|XM_504847.1| Yarrowia lipolytica CLIB122, YALI0F01056g predi... 40 8.8
29gb|AC114543.10| Mus musculus, clone RP24-107C11, complete sequence 40 8.8
30emb|AJ320478.1|PYO320478 Plasmodium yoelii yir1 gene, exons 1-3 40 8.8
31emb|CR376771.10| Zebrafish DNA sequence from clone DKEY-160I7 in... 40 8.8
32emb|BX322668.29| Mouse DNA sequence from clone RP23-24H2 on chro... 40 8.8
33gb|AC164315.2| Mus musculus BAC clone RP23-18J12 from chromosome... 40 8.8
34gb|AE014174.1| Mus musculus piebald deletion region section 2 of... 40 8.8
35gb|AC118557.2| Homo sapiens chromosome 1 clone RP11-499N7, compl... 40 8.8
36gb|AC006446.4| Arabidopsis thaliana chromosome 2 clone F15O11 ma... 40 8.8
37gb|AC160759.4| Mus musculus BAC clone RP23-333K15 from chromosom... 40 8.8
38dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
39gb|AC133505.3| Mus musculus BAC clone RP24-176M20 from chromosom... 40 8.8
40dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
41dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
42dbj|AK130902.1| Homo sapiens cDNA FLJ27392 fis, clone WMC00852 40 8.8
43gb|AC163707.3| Gallus gallus BAC clone CH261-71N11 from chromoso... 40 8.8
44emb|BX001019.7| Zebrafish DNA sequence from clone DKEY-13H9 in l... 40 8.8
45gb|AC110621.6| Mus musculus BAC clone RP23-157I3 from 7, complet... 40 8.8
46emb|CT009530.5| Mouse DNA sequence from clone RP23-33O7 on chrom... 40 8.8
47emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 8.8
48gb|AC131682.4| Mus musculus BAC clone RP23-355L3 from chromosome... 40 8.8 
>ref|XM_467113.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 665

 Score =  244 bits (123), Expect = 3e-61
 Identities = 233/270 (86%), Gaps = 6/270 (2%)
 Strand = Plus / Minus

                                                                       
Query: 323 acgaaatggtcgatcatatgctttatgacatcggcaccttcgctatgcatgacgggatct 382
           |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 350 acgaaatggtcgatcatatggtttatgacatcggcaccttcgctatgcataacgggatct 291

                                                                       
Query: 383 tttacctgaattacgctgtgtgcagcagatcttgctttgctattatggaagctgacgtcc 442
           || |||||||| || || ||||| ||||||||| ||||||| || ||||||||||| |||
Sbjct: 290 ttgacctgaatcacactatgtgctgcagatcttactttgctgttgtggaagctgacatcc 231

                                                                       
Query: 443 accttttcccatgacacacgcttaagtcctctcaaaagccgttcttctagagtgcagtta 502
           ||||||||||| |||||| |||| || ||||| ||||||||||||||||   |||||   
Sbjct: 230 accttttcccacgacacaagcttcagacctcttaaaagccgttcttctaacatgcag--- 174

                                                                       
Query: 503 tccttgtccatgtcagcaacatcagcacattgatcaagagattctgctttggatagttcc 562
               ||||||  || |||||||||| ||||||||  |  | |||||||||||||||||| 
Sbjct: 173 ---ctgtccacatcggcaacatcagtacattgattcattgtttctgctttggatagttct 117

                                         
Query: 563 tcatatacaatatgtggataaatcttgctt 592
           ||||||||||||||||| ||||||||||||
Sbjct: 116 tcatatacaatatgtgggtaaatcttgctt 87



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 218 ttgccataaacgtgctcaccaggctcggc 246
           |||| |||||| |||||||||||||||||
Sbjct: 450 ttgcgataaacttgctcaccaggctcggc 422
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>dbj|AK120854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024C02, full
           insert sequence
          Length = 664

 Score =  244 bits (123), Expect = 3e-61
 Identities = 233/270 (86%), Gaps = 6/270 (2%)
 Strand = Plus / Minus

                                                                       
Query: 323 acgaaatggtcgatcatatgctttatgacatcggcaccttcgctatgcatgacgggatct 382
           |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 349 acgaaatggtcgatcatatggtttatgacatcggcaccttcgctatgcataacgggatct 290

                                                                       
Query: 383 tttacctgaattacgctgtgtgcagcagatcttgctttgctattatggaagctgacgtcc 442
           || |||||||| || || ||||| ||||||||| ||||||| || ||||||||||| |||
Sbjct: 289 ttgacctgaatcacactatgtgctgcagatcttactttgctgttgtggaagctgacatcc 230

                                                                       
Query: 443 accttttcccatgacacacgcttaagtcctctcaaaagccgttcttctagagtgcagtta 502
           ||||||||||| |||||| |||| || ||||| ||||||||||||||||   |||||   
Sbjct: 229 accttttcccacgacacaagcttcagacctcttaaaagccgttcttctaacatgcag--- 173

                                                                       
Query: 503 tccttgtccatgtcagcaacatcagcacattgatcaagagattctgctttggatagttcc 562
               ||||||  || |||||||||| ||||||||  |  | |||||||||||||||||| 
Sbjct: 172 ---ctgtccacatcggcaacatcagtacattgattcattgtttctgctttggatagttct 116

                                         
Query: 563 tcatatacaatatgtggataaatcttgctt 592
           ||||||||||||||||| ||||||||||||
Sbjct: 115 tcatatacaatatgtgggtaaatcttgctt 86



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 218 ttgccataaacgtgctcaccaggctcggc 246
           |||| |||||| |||||||||||||||||
Sbjct: 449 ttgcgataaacttgctcaccaggctcggc 421
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>dbj|AK101560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050D01, full
            insert sequence
          Length = 1750

 Score =  244 bits (123), Expect = 3e-61
 Identities = 233/270 (86%), Gaps = 6/270 (2%)
 Strand = Plus / Minus

                                                                        
Query: 323  acgaaatggtcgatcatatgctttatgacatcggcaccttcgctatgcatgacgggatct 382
            |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 1438 acgaaatggtcgatcatatggtttatgacatcggcaccttcgctatgcataacgggatct 1379

                                                                        
Query: 383  tttacctgaattacgctgtgtgcagcagatcttgctttgctattatggaagctgacgtcc 442
            || |||||||| || || ||||| ||||||||| ||||||| || ||||||||||| |||
Sbjct: 1378 ttgacctgaatcacactatgtgctgcagatcttactttgctgttgtggaagctgacatcc 1319

                                                                        
Query: 443  accttttcccatgacacacgcttaagtcctctcaaaagccgttcttctagagtgcagtta 502
            ||||||||||| |||||| |||| || ||||| ||||||||||||||||   |||||   
Sbjct: 1318 accttttcccacgacacaagcttcagacctcttaaaagccgttcttctaacatgcag--- 1262

                                                                        
Query: 503  tccttgtccatgtcagcaacatcagcacattgatcaagagattctgctttggatagttcc 562
                ||||||  || |||||||||| ||||||||  |  | |||||||||||||||||| 
Sbjct: 1261 ---ctgtccacatcggcaacatcagtacattgattcattgtttctgctttggatagttct 1205

                                          
Query: 563  tcatatacaatatgtggataaatcttgctt 592
            ||||||||||||||||| ||||||||||||
Sbjct: 1204 tcatatacaatatgtgggtaaatcttgctt 1175



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 218  ttgccataaacgtgctcaccaggctcggc 246
            |||| |||||| |||||||||||||||||
Sbjct: 1538 ttgcgataaacttgctcaccaggctcggc 1510
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>gb|AY104814.1| Zea mays PCO089410 mRNA sequence
          Length = 1195

 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 524  tcagcacattgatcaagagattctgctttggatagttcctcatatacaatatgtggataa 583
            ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| || |||
Sbjct: 1062 tcagcacattgatcaggagcttctgctttggatagttcctcatatacaatatgcgggtaa 1003

                                               
Query: 584  atcttgcttgtcgaatcaacccacttgggtagttc 618
            |||||| | || |||||||||||||||||||||||
Sbjct: 1002 atcttgttggttgaatcaacccacttgggtagttc 968



 Score =  101 bits (51), Expect = 3e-18
 Identities = 105/123 (85%)
 Strand = Plus / Minus

                                                                        
Query: 382  ttttacctgaattacgctgtgtgcagcagatcttgctttgctattatggaagctgacgtc 441
            |||||||||||| || || ||||| ||||||||| |||| ||||| ||||| || || ||
Sbjct: 1189 ttttacctgaatcacactatgtgctgcagatcttactttactattgtggaaactaacatc 1130

                                                                        
Query: 442  caccttttcccatgacacacgcttaagtcctctcaaaagccgttcttctagagtgcagtt 501
            ||||||||||||||| || ||||||||||||   |||||  |||||||||| ||||||||
Sbjct: 1129 caccttttcccatgaaacgcgcttaagtccttgtaaaaggtgttcttctagtgtgcagtt 1070

               
Query: 502  atc 504
            |||
Sbjct: 1069 atc 1067
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  111 bits (56), Expect = 3e-21
 Identities = 65/68 (95%)
 Strand = Plus / Plus

                                                                            
Query: 323      acgaaatggtcgatcatatgctttatgacatcggcaccttcgctatgcatgacgggatct 382
                |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 26495482 acgaaatggtcgatcatatggtttatgacatcggcaccttcgctatgcataacgggatct 26495541

                        
Query: 383      tttacctg 390
                || |||||
Sbjct: 26495542 ttgacctg 26495549



 Score =  101 bits (51), Expect = 3e-18
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                            
Query: 385      tacctgaattacgctgtgtgcagcagatcttgctttgctattatggaagctgacgtccac 444
                ||||||||| || || ||||| ||||||||| ||||||| || ||||||||||| |||||
Sbjct: 26495700 tacctgaatcacactatgtgctgcagatcttactttgctgttgtggaagctgacatccac 26495759

                                                           
Query: 445      cttttcccatgacacacgcttaagtcctctcaaaagccgttct 487
                ||||||||| |||||| |||| || ||||| ||||||||||||
Sbjct: 26495760 cttttcccacgacacaagcttcagacctcttaaaagccgttct 26495802



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                            
Query: 518      gcaacatcagcacattgatcaagagattctgctttggatagttcctcatatacaatatgt 577
                |||||||||| ||||||||  |  | |||||||||||||||||| |||||||||||||||
Sbjct: 26496616 gcaacatcagtacattgattcattgtttctgctttggatagttcttcatatacaatatgt 26496675

                               
Query: 578      ggataaatcttgctt 592
                || ||||||||||||
Sbjct: 26496676 gggtaaatcttgctt 26496690



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 218      ttgccataaacgtgctcaccaggctcggc 246
                |||| |||||| |||||||||||||||||
Sbjct: 26495382 ttgcgataaacttgctcaccaggctcggc 26495410
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>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1003_B06
          Length = 131956

 Score =  111 bits (56), Expect = 3e-21
 Identities = 65/68 (95%)
 Strand = Plus / Plus

                                                                         
Query: 323   acgaaatggtcgatcatatgctttatgacatcggcaccttcgctatgcatgacgggatct 382
             |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 95398 acgaaatggtcgatcatatggtttatgacatcggcaccttcgctatgcataacgggatct 95457

                     
Query: 383   tttacctg 390
             || |||||
Sbjct: 95458 ttgacctg 95465



 Score =  101 bits (51), Expect = 3e-18
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                         
Query: 385   tacctgaattacgctgtgtgcagcagatcttgctttgctattatggaagctgacgtccac 444
             ||||||||| || || ||||| ||||||||| ||||||| || ||||||||||| |||||
Sbjct: 95616 tacctgaatcacactatgtgctgcagatcttactttgctgttgtggaagctgacatccac 95675

                                                        
Query: 445   cttttcccatgacacacgcttaagtcctctcaaaagccgttct 487
             ||||||||| |||||| |||| || ||||| ||||||||||||
Sbjct: 95676 cttttcccacgacacaagcttcagacctcttaaaagccgttct 95718



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                         
Query: 518   gcaacatcagcacattgatcaagagattctgctttggatagttcctcatatacaatatgt 577
             |||||||||| ||||||||  |  | |||||||||||||||||| |||||||||||||||
Sbjct: 96532 gcaacatcagtacattgattcattgtttctgctttggatagttcttcatatacaatatgt 96591

                            
Query: 578   ggataaatcttgctt 592
             || ||||||||||||
Sbjct: 96592 gggtaaatcttgctt 96606



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 218   ttgccataaacgtgctcaccaggctcggc 246
             |||| |||||| |||||||||||||||||
Sbjct: 95298 ttgcgataaacttgctcaccaggctcggc 95326
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>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0519E06
          Length = 170634

 Score =  111 bits (56), Expect = 3e-21
 Identities = 65/68 (95%)
 Strand = Plus / Plus

                                                                         
Query: 323   acgaaatggtcgatcatatgctttatgacatcggcaccttcgctatgcatgacgggatct 382
             |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 37863 acgaaatggtcgatcatatggtttatgacatcggcaccttcgctatgcataacgggatct 37922

                     
Query: 383   tttacctg 390
             || |||||
Sbjct: 37923 ttgacctg 37930



 Score =  101 bits (51), Expect = 3e-18
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                         
Query: 385   tacctgaattacgctgtgtgcagcagatcttgctttgctattatggaagctgacgtccac 444
             ||||||||| || || ||||| ||||||||| ||||||| || ||||||||||| |||||
Sbjct: 38081 tacctgaatcacactatgtgctgcagatcttactttgctgttgtggaagctgacatccac 38140

                                                        
Query: 445   cttttcccatgacacacgcttaagtcctctcaaaagccgttct 487
             ||||||||| |||||| |||| || ||||| ||||||||||||
Sbjct: 38141 cttttcccacgacacaagcttcagacctcttaaaagccgttct 38183



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                         
Query: 518   gcaacatcagcacattgatcaagagattctgctttggatagttcctcatatacaatatgt 577
             |||||||||| ||||||||  |  | |||||||||||||||||| |||||||||||||||
Sbjct: 38997 gcaacatcagtacattgattcattgtttctgctttggatagttcttcatatacaatatgt 39056

                            
Query: 578   ggataaatcttgctt 592
             || ||||||||||||
Sbjct: 39057 gggtaaatcttgctt 39071



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 218   ttgccataaacgtgctcaccaggctcggc 246
             |||| |||||| |||||||||||||||||
Sbjct: 37763 ttgcgataaacttgctcaccaggctcggc 37791
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score =  111 bits (56), Expect = 3e-21
 Identities = 65/68 (95%)
 Strand = Plus / Plus

                                                                          
Query: 323    acgaaatggtcgatcatatgctttatgacatcggcaccttcgctatgcatgacgggatct 382
              |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 201171 acgaaatggtcgatcatatggtttatgacatcggcaccttcgctatgcataacgggatct 201230

                      
Query: 383    tttacctg 390
              || |||||
Sbjct: 201231 ttgacctg 201238



 Score =  101 bits (51), Expect = 3e-18
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                          
Query: 385    tacctgaattacgctgtgtgcagcagatcttgctttgctattatggaagctgacgtccac 444
              ||||||||| || || ||||| ||||||||| ||||||| || ||||||||||| |||||
Sbjct: 201389 tacctgaatcacactatgtgctgcagatcttactttgctgttgtggaagctgacatccac 201448

                                                         
Query: 445    cttttcccatgacacacgcttaagtcctctcaaaagccgttct 487
              ||||||||| |||||| |||| || ||||| ||||||||||||
Sbjct: 201449 cttttcccacgacacaagcttcagacctcttaaaagccgttct 201491



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                          
Query: 518    gcaacatcagcacattgatcaagagattctgctttggatagttcctcatatacaatatgt 577
              |||||||||| ||||||||  |  | |||||||||||||||||| |||||||||||||||
Sbjct: 202308 gcaacatcagtacattgattcattgtttctgctttggatagttcttcatatacaatatgt 202367

                             
Query: 578    ggataaatcttgctt 592
              || ||||||||||||
Sbjct: 202368 gggtaaatcttgctt 202382



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 218    ttgccataaacgtgctcaccaggctcggc 246
              |||| |||||| |||||||||||||||||
Sbjct: 201071 ttgcgataaacttgctcaccaggctcggc 201099
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>gb|AC138114.3| Mus musculus BAC clone RP24-247F6 from chromosome 6, complete sequence
          Length = 170688

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 393    ttacgctgtgtgcagcagatct 414
              ||||||||||||||||||||||
Sbjct: 169797 ttacgctgtgtgcagcagatct 169818
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>gb|AC121855.3| Mus musculus BAC clone RP24-97C18 from chromosome 6, complete
            sequence
          Length = 192062

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 393  ttacgctgtgtgcagcagatct 414
            ||||||||||||||||||||||
Sbjct: 2437 ttacgctgtgtgcagcagatct 2458
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>gb|AE013144.1| Thermoanaerobacter tengcongensis MB4, section 171 of 244 of the
            complete genome
          Length = 12528

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 549  ctttggatagttcctcatata 569
            |||||||||||||||||||||
Sbjct: 5094 ctttggatagttcctcatata 5074
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>gb|AY268954.1| Thermoanaerobacter tengcongensis alpha-glucosidase (gluA) gene,
            complete cds
          Length = 2418

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 549  ctttggatagttcctcatata 569
            |||||||||||||||||||||
Sbjct: 2125 ctttggatagttcctcatata 2145
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>gb|DQ019468.1| Lilium longiflorum clone LP17 unknown mRNA
          Length = 832

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 558 gttcctcatatacaatatgtggata 582
           ||||||||| |||||||||||||||
Sbjct: 682 gttcctcatgtacaatatgtggata 658
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>emb|AL935199.4| Zebrafish DNA sequence from clone CH211-241L3, complete sequence
          Length = 139520

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 88    atacatattgcataataattg 108
             |||||||||||||||||||||
Sbjct: 41688 atacatattgcataataattg 41708
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>emb|AL929058.4| Zebrafish DNA sequence from clone DKEY-69H9 in linkage group 20,
             complete sequence
          Length = 106063

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 89    tacatattgcataataattgc 109
             |||||||||||||||||||||
Sbjct: 95815 tacatattgcataataattgc 95795
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>gb|AC168091.3| Mus musculus BAC clone RP23-163F18 from chromosome 14, complete sequence
          Length = 227936

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    atgtcagcaacatcagcaca 531
              ||||||||||||||||||||
Sbjct: 215156 atgtcagcaacatcagcaca 215137
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    gctcggcgactccgcggtta 259
              ||||||||||||||||||||
Sbjct: 507607 gctcggcgactccgcggtta 507626
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>gb|AC166105.4| Mus musculus BAC clone RP23-251L22 from chromosome 14, complete
             sequence
          Length = 231837

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   aacacttctgactttctgaa 187
             ||||||||||||||||||||
Sbjct: 73196 aacacttctgactttctgaa 73215
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    gctcggcgactccgcggtta 259
              ||||||||||||||||||||
Sbjct: 507423 gctcggcgactccgcggtta 507442
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>gb|AC116778.9| Mus musculus chromosome 1, clone RP24-481H3, complete sequence
          Length = 132180

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    aagaacgacatgacacgacc 138
              ||||||||||||||||||||
Sbjct: 104073 aagaacgacatgacacgacc 104092
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>gb|AC158940.8| Mus musculus chromosome 1, clone RP24-284D7, complete sequence
          Length = 163660

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   aagaacgacatgacacgacc 138
             ||||||||||||||||||||
Sbjct: 32572 aagaacgacatgacacgacc 32591
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>gb|AC158520.2| Mus musculus BAC clone RP23-434P22 from chromosome 14, complete
             sequence
          Length = 201291

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   aagaacgacatgacacgacc 138
             ||||||||||||||||||||
Sbjct: 77822 aagaacgacatgacacgacc 77841
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>emb|AJ459965.1|ECA459965 Equus caballus CRISP3 gene for cysteine-rich secretory protein 3 and
             TPX1 gene for testis specific protein 1
          Length = 137520

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    cattgataaaacagtggtgg 34
             ||||||||||||||||||||
Sbjct: 59892 cattgataaaacagtggtgg 59873
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>ref|XM_726115.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00328)
           partial mRNA
          Length = 1119

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 88  atacatattgcataataatt 107
           ||||||||||||||||||||
Sbjct: 633 atacatattgcataataatt 614
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>ref|XM_728080.1| Plasmodium chabaudi chabaudi hypothetical protein (PC401333.00.0)
           partial mRNA
          Length = 216

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  acatacatattgcataataa 105
           ||||||||||||||||||||
Sbjct: 177 acatacatattgcataataa 196
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>gb|AC117644.6| Mus musculus chromosome 7, clone RP23-238L7, complete sequence
          Length = 217015

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   aagaacgacatgacacgacc 138
             ||||||||||||||||||||
Sbjct: 82602 aagaacgacatgacacgacc 82621
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>emb|AL731551.9| Human DNA sequence from clone RP11-337F21 on chromosome 10 Contains
            part of the CUBN gene for cubilin (intrinsic
            factor-cobalamin receptor), complete sequence
          Length = 103188

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 557  agttcctcatatacaatatgtggataaa 584
            |||||||||||||||| ||| |||||||
Sbjct: 5433 agttcctcatatacaaaatggggataaa 5406
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>ref|XM_504847.1| Yarrowia lipolytica CLIB122, YALI0F01056g predicted mRNA
          Length = 3507

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 211  cctgggattgccataaacgt 230
            ||||||||||||||||||||
Sbjct: 3123 cctgggattgccataaacgt 3104
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>gb|AC114543.10| Mus musculus, clone RP24-107C11, complete sequence
          Length = 191639

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   aacacttctgactttctgaa 187
             ||||||||||||||||||||
Sbjct: 46147 aacacttctgactttctgaa 46128
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>emb|AJ320478.1|PYO320478 Plasmodium yoelii yir1 gene, exons 1-3
          Length = 1517

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 88  atacatattgcataataatt 107
           ||||||||||||||||||||
Sbjct: 776 atacatattgcataataatt 757
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>emb|CR376771.10| Zebrafish DNA sequence from clone DKEY-160I7 in linkage group 1,
             complete sequence
          Length = 178445

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   atgatcacaacacaatcttt 290
             ||||||||||||||||||||
Sbjct: 12063 atgatcacaacacaatcttt 12044
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>emb|BX322668.29| Mouse DNA sequence from clone RP23-24H2 on chromosome X, complete
             sequence
          Length = 173538

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   aagaacgacatgacacgacc 138
             ||||||||||||||||||||
Sbjct: 65866 aagaacgacatgacacgacc 65885
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>gb|AC164315.2| Mus musculus BAC clone RP23-18J12 from chromosome 14, complete sequence
          Length = 204011

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 512    atgtcagcaacatcagcaca 531
              ||||||||||||||||||||
Sbjct: 113632 atgtcagcaacatcagcaca 113651
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>gb|AE014174.1| Mus musculus piebald deletion region section 2 of 11 of the complete
              sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    aagaacgacatgacacgacc 138
              ||||||||||||||||||||
Sbjct: 220110 aagaacgacatgacacgacc 220129
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>gb|AC118557.2| Homo sapiens chromosome 1 clone RP11-499N7, complete sequence
          Length = 168688

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 179   ctttctgaacgccttctatatgac 202
             ||||||||| ||||||||||||||
Sbjct: 24635 ctttctgaaagccttctatatgac 24658
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>gb|AC006446.4| Arabidopsis thaliana chromosome 2 clone F15O11 map PRI, complete
             sequence
          Length = 91688

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   gaaagattaaagaacgacat 129
             ||||||||||||||||||||
Sbjct: 39462 gaaagattaaagaacgacat 39481
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>gb|AC160759.4| Mus musculus BAC clone RP23-333K15 from chromosome 16, complete
             sequence
          Length = 190127

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   aagaacgacatgacacgacc 138
             ||||||||||||||||||||
Sbjct: 30750 aagaacgacatgacacgacc 30731
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 119      aagaacgacatgacacgacc 138
                ||||||||||||||||||||
Sbjct: 22983260 aagaacgacatgacacgacc 22983241
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>gb|AC133505.3| Mus musculus BAC clone RP24-176M20 from chromosome 16, complete
             sequence
          Length = 149947

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   aagaacgacatgacacgacc 138
             ||||||||||||||||||||
Sbjct: 35838 aagaacgacatgacacgacc 35857
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>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0502H06
          Length = 165630

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    aagaacgacatgacacgacc 138
              ||||||||||||||||||||
Sbjct: 158082 aagaacgacatgacacgacc 158063
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>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0652A05
          Length = 150455

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   aagaacgacatgacacgacc 138
             ||||||||||||||||||||
Sbjct: 49745 aagaacgacatgacacgacc 49726
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>dbj|AK130902.1| Homo sapiens cDNA FLJ27392 fis, clone WMC00852
          Length = 1792

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 179 ctttctgaacgccttctatatgac 202
           ||||||||| ||||||||||||||
Sbjct: 629 ctttctgaaagccttctatatgac 606
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>gb|AC163707.3| Gallus gallus BAC clone CH261-71N11 from chromosome ul, complete
             sequence
          Length = 174599

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 404   gcagcagatcttgctttgctatta 427
             |||||||| |||||||||||||||
Sbjct: 28389 gcagcagagcttgctttgctatta 28412
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>emb|BX001019.7| Zebrafish DNA sequence from clone DKEY-13H9 in linkage group 16,
             complete sequence
          Length = 226271

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   tacaaacacttctgactttc 183
             ||||||||||||||||||||
Sbjct: 58784 tacaaacacttctgactttc 58765
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>gb|AC110621.6| Mus musculus BAC clone RP23-157I3 from 7, complete sequence
          Length = 202956

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    aagaacgacatgacacgacc 138
              ||||||||||||||||||||
Sbjct: 136415 aagaacgacatgacacgacc 136396
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>emb|CT009530.5| Mouse DNA sequence from clone RP23-33O7 on chromosome 14, complete
             sequence
          Length = 188700

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   aagaacgacatgacacgacc 138
             ||||||||||||||||||||
Sbjct: 36128 aagaacgacatgacacgacc 36109
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    cctgggattgccataaacgt 230
              ||||||||||||||||||||
Sbjct: 171092 cctgggattgccataaacgt 171111
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>gb|AC131682.4| Mus musculus BAC clone RP23-355L3 from chromosome unknown, complete
             sequence
          Length = 196773

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   aagaacgacatgacacgacc 138
             ||||||||||||||||||||
Sbjct: 85843 aagaacgacatgacacgacc 85824


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,776,083
Number of Sequences: 3902068
Number of extensions: 4776083
Number of successful extensions: 86818
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86588
Number of HSP's gapped (non-prelim): 230
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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