ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags39h15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1278 Score = 466 bits (235), Expect = e-128 Identities = 367/409 (89%), Gaps = 7/409 (1%) Strand = Plus / Minus Query: 289 tcaaagctcatcatggtagtcatc---ccagtgatccctgttgcgtcttttgtatctgtc 345 |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||| Sbjct: 1278 tcaaagctcatcatggtagtcatcatcccagtgatccctatgacgtcttttgtatctgtc 1219 Query: 346 cttgtagtggtccctgccacggtgtcgatcacccctctctctcctccgtcgctctccttc 405 |||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1218 cttgtaat---ccctgccacggtgccgatcacccctctctctcctccgtcgctctccttc 1162 Query: 406 ctcccttgcttgttgagcttccttatcttctctagctttcctctccttttcagcttcttc 465 |||||||||| ||| |||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1161 ctcccttgctcgttcagcttccttatcctctctagctttcctctccttctcagcttcttc 1102 Query: 466 aaaagcctccttttcagcctccttatttgcaccccacgtttcatcggcaacctgttttgc 525 ||||||||| ||||| |||||| | ||||||||||| ||||| || ||| | | | |||| Sbjct: 1101 aaaagcctctttttcggcctccctgtttgcaccccatgtttcctcagcagcttttcttgc 1042 Query: 526 atattccgggtcatcgcaaatgaggatgttgtcaaaaacagaaccggcttttacctgcca 585 ||||||||| || || ||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 1041 atattccggatcgtcacaaatgaggatgttgtcaaaaaccgaaccagcctttacctgcca 982 Query: 586 aacttcaattccaatatacttcagaggtttcagtacatataaatctggatcatcctcaaa 645 ||| |||||||||||||| |||| |||||||| ||||||| ||||||||||||||||| Sbjct: 981 aacctcaattccaatatatttcaagggtttcagcacatataggtctggatcatcctcaaa 922 Query: 646 ctctggattatcaatccatgggatcttncatttaccccttgnagttagg 694 ||||||||||||||||||||||||||| |||||| |||||| ||||||| Sbjct: 921 ctctggattatcaatccatgggatcttccattta-cccttgtagttagg 874
>dbj|AK099626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055B02, full insert sequence Length = 1784 Score = 458 bits (231), Expect = e-125 Identities = 366/409 (89%), Gaps = 7/409 (1%) Strand = Plus / Minus Query: 289 tcaaagctcatcatggtagtcatc---ccagtgatccctgttgcgtcttttgtatctgtc 345 |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||| Sbjct: 1418 tcaaagctcatcatggtagtcatcatcccagtgatccctatgacgtcttttgtatctgtc 1359 Query: 346 cttgtagtggtccctgccacggtgtcgatcacccctctctctcctccgtcgctctccttc 405 |||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1358 cttgtaat---ccctgccacggtgccgatcacccctctctctcctccgtcgctctccttc 1302 Query: 406 ctcccttgcttgttgagcttccttatcttctctagctttcctctccttttcagcttcttc 465 |||||||||| ||| |||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1301 ctcccttgctcgttcagcttccttatcctctctagctttcctctccttctcagcttcttc 1242 Query: 466 aaaagcctccttttcagcctccttatttgcaccccacgtttcatcggcaacctgttttgc 525 ||||||||| ||||| |||||| | ||||||||||| ||||| || ||| | | | |||| Sbjct: 1241 aaaagcctctttttcggcctccctgtttgcaccccatgtttcctcagcagcttttcttgc 1182 Query: 526 atattccgggtcatcgcaaatgaggatgttgtcaaaaacagaaccggcttttacctgcca 585 ||||||||| || || ||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 1181 atattccggatcgtcacaaatgaggatgttgtcaaaaaccgaaccagcctttacctgcca 1122 Query: 586 aacttcaattccaatatacttcagaggtttcagtacatataaatctggatcatcctcaaa 645 ||| |||||||||||||| |||| |||||||| ||||||| ||||||||||||||||| Sbjct: 1121 aacctcaattccaatatatttcaagggtttcagcacatataggtctggatcatcctcaaa 1062 Query: 646 ctctggattatcaatccatgggatcttncatttaccccttgnagttagg 694 |||||||||| |||||||||||||||| |||||| |||||| ||||||| Sbjct: 1061 ctctggattaccaatccatgggatcttccattta-cccttgtagttagg 1014
>gb|AY105822.1| Zea mays PCO122996 mRNA sequence Length = 1660 Score = 307 bits (155), Expect = 3e-80 Identities = 247/277 (89%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 418 ttgagcttccttatcttctctagctttcctctccttttcagcttcttcaaaagcctcctt 477 |||| ||||| |||| || ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1219 ttgaccttccctatcctccctagctttcctctccttttcagcttcttcaaaagcttcctt 1160 Query: 478 ttcagcctccttatttgcaccccacgtttcatcggcaacctgttttgcatattccgggtc 537 |||||||||| ||||||||||||| ||||| || |||||| | ||||||| || ||||| Sbjct: 1159 ttcagcctccctatttgcaccccaagtttcctcaacaacctttcttgcatactcagggtc 1100 Query: 538 atcgcaaatgaggatgttgtcaaaaacagaaccggcttttacctgccaaacttcaattcc 597 ||| ||||| || |||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 1099 atcacaaatcagaatgttgtcgaaaactgaaccagcttttacctgccaaacttcaattcc 1040 Query: 598 aatatacttcagaggtttcagtacatataaatctggatcatcctcaaactctggattatc 657 ||||||||||| ||| ||||| ||||| | |||||||||||||||||||||||||||||| Sbjct: 1039 aatatacttcaaaggcttcagcacataaagatctggatcatcctcaaactctggattatc 980 Query: 658 aatccatgggatcttncatttaccccttgnagttagg 694 ||||||||| |||| |||||| |||||| ||||||| Sbjct: 979 gatccatggggtcttccattta-cccttgtagttagg 944 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 293 agctcatcatggtagtcatcccagtgatccctgt 326 ||||||||||||||||| ||||||||||| |||| Sbjct: 1308 agctcatcatggtagtcgtcccagtgatctctgt 1275
>gb|BT017842.1| Zea mays clone EL01N0510B01.c mRNA sequence Length = 673 Score = 202 bits (102), Expect = 1e-48 Identities = 218/257 (84%) Strand = Plus / Minus Query: 422 gcttccttatcttctctagctttcctctccttttcagcttcttcaaaagcctccttttca 481 ||||||| ||||||||||| ||||||| |||||||| ||||||| |||||||||||| Sbjct: 279 gcttcctcttcttctctagccttcctctttctttcagctccttcaaaggcctccttttca 220 Query: 482 gcctccttatttgcaccccacgtttcatcggcaacctgttttgcatattccgggtcatcg 541 ||||||||||||||| | | |||||||| |||| ||| ||||||| || ||||||||| Sbjct: 219 gcctccttatttgcagcaaaagtttcatctacaacatgtcttgcatagtctgggtcatcg 160 Query: 542 caaatgaggatgttgtcaaaaacagaaccggcttttacctgccaaacttcaattccaata 601 ||||| | |||||||||||||| ||||| ||||| |||||||| |||||||| || | | Sbjct: 159 caaatcaaaatgttgtcaaaaactgaaccagctttgacctgccatacttcaatccccaca 100 Query: 602 tacttcagaggtttcagtacatataaatctggatcatcctcaaactctggattatcaatc 661 |||| || ||||||||| ||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 99 tactgcaaaggtttcagaacatataggtctgggtcatcctcaaactctggattgacaatc 40 Query: 662 catgggatcttncattt 678 || ||| |||| ||||| Sbjct: 39 caaggggtcttccattt 23
>dbj|AK060834.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C08, full insert sequence Length = 1481 Score = 190 bits (96), Expect = 4e-45 Identities = 224/266 (84%), Gaps = 1/266 (0%) Strand = Plus / Minus Query: 431 tcttctctagctttcctctccttttcagcttcttcaaaagcctccttttcagcctcctta 490 ||||||||||| |||||| ||||||||| || || || ||||||||||||||||| ||| Sbjct: 958 tcttctctagccttcctccgcttttcagcctcctcgaaggcctccttttcagcctcttta 899 Query: 491 tttgcaccccacgtttcatcggcaacctgttttgcatattccgggtcatcgcaaatgagg 550 |||||| ||| ||||||| |||| | ||||||| |||||||| || ||||| | Sbjct: 898 tttgcagccctaacttcatcgacaacacttcttgcatactccgggtcgtcacaaatcaaa 839 Query: 551 atgttgtcaaaaacagaaccggcttttacctgccaaacttcaattccaatatacttcaga 610 |||||||||||||| ||||| ||||| ||||||||||| |||||||| | ||||| || | Sbjct: 838 atgttgtcaaaaactgaaccagctttcacctgccaaacctcaattcccacatactgcaaa 779 Query: 611 ggtttcagtacatataaatctggatcatcctcaaactctggattatcaatccatgggatc 670 |||||||| ||||||| ||||| || |||||||| |||||||||||||||||||||||| Sbjct: 778 ggtttcagcacatataggtctgggtcgtcctcaaattctggattatcaatccatgggatc 719 Query: 671 ttncatttaccccttgnagttagggt 696 || ||||| |||||| ||||||||| Sbjct: 718 ttccattt-tcccttgtagttagggt 694
>ref|XM_475503.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1407 Score = 182 bits (92), Expect = 1e-42 Identities = 223/266 (83%), Gaps = 1/266 (0%) Strand = Plus / Minus Query: 431 tcttctctagctttcctctccttttcagcttcttcaaaagcctccttttcagcctcctta 490 ||||||||||| |||||| ||||||||| || || || ||||||||||||||||| ||| Sbjct: 1136 tcttctctagccttcctccgcttttcagcctcctcgaaggcctccttttcagcctcttta 1077 Query: 491 tttgcaccccacgtttcatcggcaacctgttttgcatattccgggtcatcgcaaatgagg 550 |||||| ||| |||||| |||| | ||||||| |||||||| || ||||| | Sbjct: 1076 tttgcagccctaacttcatcaacaacacttcttgcatactccgggtcgtcacaaatcaaa 1017 Query: 551 atgttgtcaaaaacagaaccggcttttacctgccaaacttcaattccaatatacttcaga 610 |||||||||||||| ||||| ||||| ||||||||||| |||||||| | ||||| || | Sbjct: 1016 atgttgtcaaaaactgaaccagctttcacctgccaaacctcaattcccacatactgcaaa 957 Query: 611 ggtttcagtacatataaatctggatcatcctcaaactctggattatcaatccatgggatc 670 |||||||| ||||||| ||||| || |||||||| |||||||||||||||||||||||| Sbjct: 956 ggtttcagcacatataggtctgggtcgtcctcaaattctggattatcaatccatgggatc 897 Query: 671 ttncatttaccccttgnagttagggt 696 || ||||| |||||| ||||||||| Sbjct: 896 ttccattt-tcccttgtagttagggt 872
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 135 bits (68), Expect = 2e-28 Identities = 91/98 (92%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 331 tcttttgtatctgtccttgtagtggtccctgccacggtgtcgatcacccctctctctcct 390 ||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||| Sbjct: 38924737 tcttttgtatctgtccttgtaat---ccctgccacggtgccgatcacccctctctctcct 38924793 Query: 391 ccgtcgctctccttcctcccttgcttgttgagcttcct 428 ||||||||||||||||||||||||| ||| |||||||| Sbjct: 38924794 ccgtcgctctccttcctcccttgctcgttcagcttcct 38924831 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 576 ttacctgccaaacttcaattccaatatacttcagaggtttcagtacatataaatctggat 635 ||||||||||||| |||||||||||||| |||| |||||||| ||||||| ||||||| Sbjct: 38925233 ttacctgccaaacctcaattccaatatatttcaagggtttcagcacatataggtctggat 38925292 Query: 636 catcctcaaactctg 650 ||||||||||||||| Sbjct: 38925293 catcctcaaactctg 38925307 Score = 87.7 bits (44), Expect = 5e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 426 ccttatcttctctagctttcctctccttttcagcttcttcaaaagcctccttttcagcct 485 ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 38924908 ccttatcctctctagctttcctctccttctcagcttcttcaaaagcctctttttcggcct 38924967 Score = 81.8 bits (41), Expect = 3e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 491 tttgcaccccacgtttcatcggcaacctgttttgcatattccgggtcatcgcaaatgagg 550 ||||||||||| ||||| || ||| | | | ||||||||||||| || || ||||||||| Sbjct: 38925055 tttgcaccccatgtttcctcagcagcttttcttgcatattccggatcgtcacaaatgagg 38925114 Query: 551 atgttgtcaaaaacagaaccggcttttacctgc 583 |||||||||||||| ||||| || ||||||||| Sbjct: 38925115 atgttgtcaaaaaccgaaccagcctttacctgc 38925147 Score = 65.9 bits (33), Expect = 2e-07 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 648 ctggattatcaatccatgggatcttncatttaccccttgnagttagg 694 ||||||||||||||||||||||||| |||||| |||||| ||||||| Sbjct: 38925429 ctggattatcaatccatgggatcttccattta-cccttgtagttagg 38925474 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgct 398 ||||||||||||||||||||| Sbjct: 31537898 ccctctctctcctccgtcgct 31537878 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 36330709 ccctctctctcctccgtcgc 36330728 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 25214889 ccctctctctcctccgtcgc 25214870 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 19731812 ccctctctctcctccgtcgc 19731793 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 17874878 ccctctctctcctccgtcgc 17874859 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 16876618 ccctctctctcctccgtcgc 16876599 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 16847263 ccctctctctcctccgtcgc 16847282 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 15637374 ccctctctctcctccgtcgc 15637355
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 135 bits (68), Expect = 2e-28 Identities = 91/98 (92%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 331 tcttttgtatctgtccttgtagtggtccctgccacggtgtcgatcacccctctctctcct 390 ||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||| Sbjct: 197619 tcttttgtatctgtccttgtaat---ccctgccacggtgccgatcacccctctctctcct 197675 Query: 391 ccgtcgctctccttcctcccttgcttgttgagcttcct 428 ||||||||||||||||||||||||| ||| |||||||| Sbjct: 197676 ccgtcgctctccttcctcccttgctcgttcagcttcct 197713 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 576 ttacctgccaaacttcaattccaatatacttcagaggtttcagtacatataaatctggat 635 ||||||||||||| |||||||||||||| |||| |||||||| ||||||| ||||||| Sbjct: 198115 ttacctgccaaacctcaattccaatatatttcaagggtttcagcacatataggtctggat 198174 Query: 636 catcctcaaactctg 650 ||||||||||||||| Sbjct: 198175 catcctcaaactctg 198189 Score = 87.7 bits (44), Expect = 5e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 426 ccttatcttctctagctttcctctccttttcagcttcttcaaaagcctccttttcagcct 485 ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 197790 ccttatcctctctagctttcctctccttctcagcttcttcaaaagcctctttttcggcct 197849 Score = 81.8 bits (41), Expect = 3e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 491 tttgcaccccacgtttcatcggcaacctgttttgcatattccgggtcatcgcaaatgagg 550 ||||||||||| ||||| || ||| | | | ||||||||||||| || || ||||||||| Sbjct: 197937 tttgcaccccatgtttcctcagcagcttttcttgcatattccggatcgtcacaaatgagg 197996 Query: 551 atgttgtcaaaaacagaaccggcttttacctgc 583 |||||||||||||| ||||| || ||||||||| Sbjct: 197997 atgttgtcaaaaaccgaaccagcctttacctgc 198029 Score = 65.9 bits (33), Expect = 2e-07 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 648 ctggattatcaatccatgggatcttncatttaccccttgnagttagg 694 ||||||||||||||||||||||||| |||||| |||||| ||||||| Sbjct: 198311 ctggattatcaatccatgggatcttccattta-cccttgtagttagg 198356
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 135 bits (68), Expect = 2e-28 Identities = 91/98 (92%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 331 tcttttgtatctgtccttgtagtggtccctgccacggtgtcgatcacccctctctctcct 390 ||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||| Sbjct: 89523 tcttttgtatctgtccttgtaat---ccctgccacggtgccgatcacccctctctctcct 89579 Query: 391 ccgtcgctctccttcctcccttgcttgttgagcttcct 428 ||||||||||||||||||||||||| ||| |||||||| Sbjct: 89580 ccgtcgctctccttcctcccttgctcgttcagcttcct 89617 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 576 ttacctgccaaacttcaattccaatatacttcagaggtttcagtacatataaatctggat 635 ||||||||||||| |||||||||||||| |||| |||||||| ||||||| ||||||| Sbjct: 90019 ttacctgccaaacctcaattccaatatatttcaagggtttcagcacatataggtctggat 90078 Query: 636 catcctcaaactctg 650 ||||||||||||||| Sbjct: 90079 catcctcaaactctg 90093 Score = 87.7 bits (44), Expect = 5e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 426 ccttatcttctctagctttcctctccttttcagcttcttcaaaagcctccttttcagcct 485 ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 89694 ccttatcctctctagctttcctctccttctcagcttcttcaaaagcctctttttcggcct 89753 Score = 81.8 bits (41), Expect = 3e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 491 tttgcaccccacgtttcatcggcaacctgttttgcatattccgggtcatcgcaaatgagg 550 ||||||||||| ||||| || ||| | | | ||||||||||||| || || ||||||||| Sbjct: 89841 tttgcaccccatgtttcctcagcagcttttcttgcatattccggatcgtcacaaatgagg 89900 Query: 551 atgttgtcaaaaacagaaccggcttttacctgc 583 |||||||||||||| ||||| || ||||||||| Sbjct: 89901 atgttgtcaaaaaccgaaccagcctttacctgc 89933 Score = 65.9 bits (33), Expect = 2e-07 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 648 ctggattatcaatccatgggatcttncatttaccccttgnagttagg 694 ||||||||||||||||||||||||| |||||| |||||| ||||||| Sbjct: 90215 ctggattatcaatccatgggatcttccattta-cccttgtagttagg 90260
>gb|AY336743.1| Brassica rapa subsp. pekinensis calreticulin 3 mRNA, partial cds Length = 1142 Score = 83.8 bits (42), Expect = 7e-13 Identities = 86/101 (85%) Strand = Plus / Minus Query: 578 acctgccaaacttcaattccaatatacttcagaggtttcagtacatataaatctggatca 637 |||||||| |||||||| || || || || | ||| ||||| ||||| | |||||||||| Sbjct: 989 acctgccatacttcaatgcctatgtattttataggcttcagaacataaagatctggatca 930 Query: 638 tcctcaaactctggattatcaatccatgggatcttncattt 678 || ||||||||||||||||| ||||||||| |||| ||||| Sbjct: 929 tcttcaaactctggattatctatccatgggttcttccattt 889
>ref|NM_202064.1| Arabidopsis thaliana CRT3 (CALRETICULIN 3); calcium ion binding AT1G08450 (CRT3) transcript variant AT1G08450.2 mRNA, complete cds Length = 1307 Score = 63.9 bits (32), Expect = 7e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 628 atctggatcatcctcaaactctggattatcaatccatgggatcttncattt 678 |||||||||||| ||||| ||||||||||| ||||||||| |||| ||||| Sbjct: 805 atctggatcatcttcaaattctggattatctatccatgggttcttccattt 755 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 gagcttccttatcttctctagcttt 444 ||||||||| ||||||||||||||| Sbjct: 1013 gagcttcctcatcttctctagcttt 989
>ref|NM_100718.2| Arabidopsis thaliana CRT3 (CALRETICULIN 3); calcium ion binding AT1G08450 (CRT3) transcript variant AT1G08450.1 mRNA, complete cds Length = 1469 Score = 63.9 bits (32), Expect = 7e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 628 atctggatcatcctcaaactctggattatcaatccatgggatcttncattt 678 |||||||||||| ||||| ||||||||||| ||||||||| |||| ||||| Sbjct: 967 atctggatcatcttcaaattctggattatctatccatgggttcttccattt 917 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 gagcttccttatcttctctagcttt 444 ||||||||| ||||||||||||||| Sbjct: 1175 gagcttcctcatcttctctagcttt 1151
>gb|AY056320.1| Arabidopsis thaliana putative calreticulin protein (At1g08450) mRNA, complete cds Length = 1462 Score = 63.9 bits (32), Expect = 7e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 628 atctggatcatcctcaaactctggattatcaatccatgggatcttncattt 678 |||||||||||| ||||| ||||||||||| ||||||||| |||| ||||| Sbjct: 967 atctggatcatcttcaaattctggattatctatccatgggttcttccattt 917 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 gagcttccttatcttctctagcttt 444 ||||||||| ||||||||||||||| Sbjct: 1175 gagcttcctcatcttctctagcttt 1151
>emb|BX815781.1|CNS0ACTU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZH04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1391 Score = 63.9 bits (32), Expect = 7e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 628 atctggatcatcctcaaactctggattatcaatccatgggatcttncattt 678 |||||||||||| ||||| ||||||||||| ||||||||| |||| ||||| Sbjct: 952 atctggatcatcttcaaattctggattatctatccatgggttcttccattt 902 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 gagcttccttatcttctctagcttt 444 ||||||||| ||||||||||||||| Sbjct: 1160 gagcttcctcatcttctctagcttt 1136
>emb|BX815527.1|CNS0AATS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1359 Score = 63.9 bits (32), Expect = 7e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 628 atctggatcatcctcaaactctggattatcaatccatgggatcttncattt 678 |||||||||||| ||||| ||||||||||| ||||||||| |||| ||||| Sbjct: 954 atctggatcatcttcaaattctggattatctatccatgggttcttccattt 904 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 gagcttccttatcttctctagcttt 444 ||||||||| ||||||||||||||| Sbjct: 1162 gagcttcctcatcttctctagcttt 1138
>gb|BT002494.1| Arabidopsis thaliana calreticulin, putative (At1g08450) mRNA, complete cds Length = 1426 Score = 63.9 bits (32), Expect = 7e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 628 atctggatcatcctcaaactctggattatcaatccatgggatcttncattt 678 |||||||||||| ||||| ||||||||||| ||||||||| |||| ||||| Sbjct: 967 atctggatcatcttcaaattctggattatctatccatgggttcttccattt 917
>gb|U66345.1|ATU66345 Arabidopsis thaliana calreticulin (Crt3) mRNA, complete cds Length = 1424 Score = 63.9 bits (32), Expect = 7e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 628 atctggatcatcctcaaactctggattatcaatccatgggatcttncattt 678 |||||||||||| ||||| ||||||||||| ||||||||| |||| ||||| Sbjct: 964 atctggatcatcttcaaattctggattatctatccatgggttcttccattt 914 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 gagcttccttatcttctctagcttt 444 ||||||||| ||||||||||||||| Sbjct: 1172 gagcttcctcatcttctctagcttt 1148
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 61.9 bits (31), Expect = 3e-06 Identities = 45/49 (91%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 648 ctggattatcaatccatgggatcttncatttaccccttgnagttagggt 696 ||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 43827 ctggattatcaatccatgggatcttccattt-tcccttgtagttagggt 43780 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 577 tacctgccaaacttcaattccaatatacttcagaggtttcagtacatataaatctggatc 636 |||||||||||| |||||||| | ||||| || ||||||||| ||||||| ||||| || Sbjct: 44039 tacctgccaaacctcaattcccacatactgcaaaggtttcagcacatataggtctgggtc 43980 Query: 637 atcctcaaactctg 650 |||||||| |||| Sbjct: 43979 gtcctcaaattctg 43966 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 431 tcttctctagctttcctctccttttcagcttcttcaaaagcctccttttcagcct 485 ||||||||||| |||||| ||||||||| || || || |||||||||||||||| Sbjct: 44420 tcttctctagccttcctccgcttttcagcctcctcgaaggcctccttttcagcct 44366 Score = 52.0 bits (26), Expect = 0.003 Identities = 53/62 (85%) Strand = Plus / Minus Query: 522 ttgcatattccgggtcatcgcaaatgaggatgttgtcaaaaacagaaccggcttttacct 581 ||||||| |||||||| || ||||| | |||||||||||||| ||||| ||||| |||| Sbjct: 44221 ttgcatactccgggtcgtcacaaatcaaaatgttgtcaaaaactgaaccagctttcacct 44162 Query: 582 gc 583 || Sbjct: 44161 gc 44160
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 61.9 bits (31), Expect = 3e-06 Identities = 45/49 (91%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 648 ctggattatcaatccatgggatcttncatttaccccttgnagttagggt 696 ||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 24856942 ctggattatcaatccatgggatcttccattt-tcccttgtagttagggt 24856895 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 577 tacctgccaaacttcaattccaatatacttcagaggtttcagtacatataaatctggatc 636 |||||||||||| |||||||| | ||||| || ||||||||| ||||||| ||||| || Sbjct: 24857154 tacctgccaaacctcaattcccacatactgcaaaggtttcagcacatataggtctgggtc 24857095 Query: 637 atcctcaaactctg 650 |||||||| |||| Sbjct: 24857094 gtcctcaaattctg 24857081 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 431 tcttctctagctttcctctccttttcagcttcttcaaaagcctccttttcagcct 485 ||||||||||| |||||| ||||||||| || || || |||||||||||||||| Sbjct: 24857535 tcttctctagccttcctccgcttttcagcctcctcgaaggcctccttttcagcct 24857481 Score = 52.0 bits (26), Expect = 0.003 Identities = 53/62 (85%) Strand = Plus / Minus Query: 522 ttgcatattccgggtcatcgcaaatgaggatgttgtcaaaaacagaaccggcttttacct 581 ||||||| |||||||| || ||||| | |||||||||||||| ||||| ||||| |||| Sbjct: 24857336 ttgcatactccgggtcgtcacaaatcaaaatgttgtcaaaaactgaaccagctttcacct 24857277 Query: 582 gc 583 || Sbjct: 24857276 gc 24857275 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 19143309 ccctctctctcctccgtcgc 19143328 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 13737157 ccctctctctcctccgtcgc 13737176 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 11800965 ccctctctctcctccgtcgc 11800946 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 11202821 ccctctctctcctccgtcgc 11202840 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 10297179 ccctctctctcctccgtcgc 10297198 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 9981841 ccctctctctcctccgtcgc 9981860 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 ctctctctcctccgtcgctctcct 403 ||||||| |||||||||||||||| Sbjct: 8478067 ctctctcccctccgtcgctctcct 8478090 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 4295485 ccctctctctcctccgtcgc 4295504
>gb|AC147179.15| Medicago truncatula clone mth2-142n19, complete sequence Length = 113361 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Minus Query: 513 caacctgttttgcatattccgggtcatcgcaaatgaggatgttgtcaaaaacagaacc 570 |||| |||||||||||||| || ||||||||||| | ||||||||||| || ||||| Sbjct: 107329 caacttgttttgcatattcaggatcatcgcaaatcaaaatgttgtcaaatactgaacc 107272
>gb|AY818155.1| Phormium cookianum clone PhN4R28 putative calreticulin mRNA, partial cds Length = 656 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 498 cccacgtttcatcggcaacctgttttgcatattccgggtcatcgcaaat 546 |||| ||||| || |||| || |||||||||||| |||||||||||||| Sbjct: 645 cccatgtttcttcagcaaacttttttgcatattcagggtcatcgcaaat 597
>gb|AY679606.1| Fragaria x ananassa calreticulin 3 mRNA, partial cds Length = 170 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 617 agtacatataaatctggatcatcctcaaactctggattatcaatcca 663 |||||||| | ||| || ||||| |||||||| |||||||||||||| Sbjct: 155 agtacataaagatcagggtcatcttcaaactccggattatcaatcca 109
>gb|AC135562.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0087P19, complete sequence Length = 172066 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 384 ctctcctccgtcgctctccttcctccc 410 |||||||||||||||| |||||||||| Sbjct: 166785 ctctcctccgtcgctccccttcctccc 166811 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 87897 ccctctctctcctccgtcgc 87916
>gb|AC139171.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0024B09, complete sequence Length = 132563 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 384 ctctcctccgtcgctctccttcctccc 410 |||||||||||||||| |||||||||| Sbjct: 10217 ctctcctccgtcgctccccttcctccc 10243
>emb|AL136538.1|SPAC30 S.pombe chromosome I cosmid c30 Length = 36315 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 agcctccttttcagcctccttat 491 ||||||||||||||||||||||| Sbjct: 34217 agcctccttttcagcctccttat 34195
>emb|Z66525.1|SPAC29E6 S.pombe chromosome I cosmid c29E6 Length = 19514 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 agcctccttttcagcctccttat 491 ||||||||||||||||||||||| Sbjct: 18061 agcctccttttcagcctccttat 18039
>ref|NM_001019997.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC30.14c), partial mRNA Length = 3258 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 agcctccttttcagcctccttat 491 ||||||||||||||||||||||| Sbjct: 1292 agcctccttttcagcctccttat 1314
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 384 ctctcctccgtcgctctccttcctccc 410 |||||||||||||||| |||||||||| Sbjct: 10270621 ctctcctccgtcgctccccttcctccc 10270647 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 15364227 ccctctctctcctccgtcgc 15364208 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 13025510 ccctctctctcctccgtcgc 13025529 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 11730920 ccctctctctcctccgtcgc 11730901 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 10191733 ccctctctctcctccgtcgc 10191752 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 9917442 ccctctctctcctccgtcgc 9917423 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 9547121 ccctctctctcctccgtcgc 9547140 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 6501501 ccctctctctcctccgtcgc 6501520
>dbj|AK105144.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-B08, full insert sequence Length = 571 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 384 ctctcctccgtcgctctccttcctccc 410 |||||||||||||||| |||||||||| Sbjct: 54 ctctcctccgtcgctccccttcctccc 80
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 384 ctctcctccgtcgctctccttcctccc 410 |||||||||||||||| |||||||||| Sbjct: 10342318 ctctcctccgtcgctccccttcctccc 10342344 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 15447164 ccctctctctcctccgtcgc 15447145 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 13105689 ccctctctctcctccgtcgc 13105708 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 11809331 ccctctctctcctccgtcgc 11809312 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 10263430 ccctctctctcctccgtcgc 10263449 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 9989139 ccctctctctcctccgtcgc 9989120 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 9618818 ccctctctctcctccgtcgc 9618837 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 6567968 ccctctctctcctccgtcgc 6567987
>ref|XM_714212.1| Candida albicans SC5314 ubiquinol cytochrome-c reductase subunit 7 (CaO19_13074), mRNA Length = 384 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 454 ttcagcttcttcaaaagcctccttttcagc 483 |||||||| ||||||||| ||||||||||| Sbjct: 357 ttcagctttttcaaaagcttccttttcagc 328
>ref|XM_714096.1| Candida albicans SC5314 ubiquinol cytochrome-c reductase subunit 7 (CaO19_5629), mRNA Length = 384 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 454 ttcagcttcttcaaaagcctccttttcagc 483 |||||||| ||||||||| ||||||||||| Sbjct: 357 ttcagctttttcaaaagcttccttttcagc 328
>gb|AY372389.1| Oncorhynchus mykiss calreticulin (CRT) mRNA, complete cds Length = 1823 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 431 tcttctctagctttcctctcct 452 |||||||||||||||||||||| Sbjct: 1139 tcttctctagctttcctctcct 1118
>gb|AC127593.4| Mus musculus BAC clone RP23-390G15 from chromosome 10, complete sequence Length = 214856 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 70 actcacaacatcagatttcagg 91 |||||||||||||||||||||| Sbjct: 96588 actcacaacatcagatttcagg 96609
>gb|AC127359.4| Mus musculus BAC clone RP23-110G23 from chromosome 1, complete sequence Length = 185255 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctctccttttcagcttcttcaa 467 |||||||||||||||||||||| Sbjct: 3559 ctctccttttcagcttcttcaa 3538
>gb|AC130817.4| Mus musculus BAC clone RP23-68J13 from 16, complete sequence Length = 193917 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctctccttttcagcttcttcaa 467 |||||||||||||||||||||| Sbjct: 36149 ctctccttttcagcttcttcaa 36170
>gb|AC008021.10| Homo sapiens chromosome 18, clone RP11-504H5, complete sequence Length = 169439 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 445 cctctccttttcagcttcttca 466 |||||||||||||||||||||| Sbjct: 44489 cctctccttttcagcttcttca 44468
>gb|AC090398.12| Homo sapiens chromosome 18, clone RP11-669I1, complete sequence Length = 133378 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 445 cctctccttttcagcttcttca 466 |||||||||||||||||||||| Sbjct: 82127 cctctccttttcagcttcttca 82106
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 379 cctctctctcctccgtcgctctccttcctc 408 |||||||||||||| || |||||||||||| Sbjct: 25468004 cctctctctcctccctctctctccttcctc 25468033 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 26612086 ccctctctctcctccgtcgc 26612105 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 6884082 ccctctctctcctccgtcgc 6884063
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 379 cctctctctcctccgtcgctctccttcctc 408 |||||||||||||| || |||||||||||| Sbjct: 142013 cctctctctcctccctctctctccttcctc 142042
>gb|AC135017.3| Mus musculus BAC clone RP24-254D14 from 1, complete sequence Length = 190598 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctctccttttcagcttcttcaa 467 |||||||||||||||||||||| Sbjct: 162767 ctctccttttcagcttcttcaa 162746
>gb|AC124514.4| Mus musculus BAC clone RP23-450H18 from 16, complete sequence Length = 182032 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctctccttttcagcttcttcaa 467 |||||||||||||||||||||| Sbjct: 10840 ctctccttttcagcttcttcaa 10819
>gb|AC165266.2| Mus musculus BAC clone CH25-588N10 from chromosome 18, complete sequence Length = 65269 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 tctctctcctccgtcgctctccttcctcc 409 |||||||||||| || ||||||||||||| Sbjct: 23596 tctctctcctccctccctctccttcctcc 23624
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 aaagcctccttttcagcctcc 487 ||||||||||||||||||||| Sbjct: 757250 aaagcctccttttcagcctcc 757230
>gb|AC080131.9| Trypanosoma brucei chromosome 4 clone RPCI93-2H8, complete sequence Length = 163689 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 aaagcctccttttcagcctcc 487 ||||||||||||||||||||| Sbjct: 125329 aaagcctccttttcagcctcc 125349
>gb|BC079976.1| Xenopus laevis MGC80665 protein, mRNA (cDNA clone MGC:80665 IMAGE:5507120), complete cds Length = 2163 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 578 acctgccaaacttcaattcca 598 ||||||||||||||||||||| Sbjct: 1367 acctgccaaacttcaattcca 1387
>gb|AC161442.5| Mus musculus chromosome 5, clone RP23-384P12, complete sequence Length = 174557 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 425 tccttatcttctctagctttc 445 ||||||||||||||||||||| Sbjct: 166626 tccttatcttctctagctttc 166646
>gb|AC138173.2| Mus musculus strain C57BL/6J clone rp23-364j24 map 17, complete sequence Length = 145253 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 tctccttttcagcttcttcaa 467 ||||||||||||||||||||| Sbjct: 129573 tctccttttcagcttcttcaa 129553
>ref|XM_820852.1| Trypanosoma brucei TREU927 clone RPCI93-2H8 hypothetical protein (Tb927.4.2870) partial mRNA Length = 852 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 aaagcctccttttcagcctcc 487 ||||||||||||||||||||| Sbjct: 563 aaagcctccttttcagcctcc 543
>gb|AC122308.3| Mus musculus BAC clone RP23-288M6 from chromosome 9, complete sequence Length = 142409 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 121 taggtggaattgtctgccctgctgt 145 |||||||||||||||||| |||||| Sbjct: 116089 taggtggaattgtctgccttgctgt 116065
>gb|AC127277.2| Mus musculus BAC clone RP24-221P14 from chromosome 3, complete sequence Length = 159339 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 ctctccttttcagcttcttca 466 ||||||||||||||||||||| Sbjct: 30559 ctctccttttcagcttcttca 30539
>ref|XM_720323.1| Plasmodium yoelii yoelii str. 17XNL arginase (PY05019) partial mRNA Length = 1134 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 agcctccttttcagcctcctt 489 ||||||||||||||||||||| Sbjct: 324 agcctccttttcagcctcctt 304 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 agcctccttttcagcctcctt 489 ||||||||||||||||||||| Sbjct: 288 agcctccttttcagcctcctt 268
>ref|XM_725720.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02868) partial mRNA Length = 4689 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 agcctccttttcagcctcctt 489 ||||||||||||||||||||| Sbjct: 1872 agcctccttttcagcctcctt 1852
>ref|XM_726356.1| Plasmodium yoelii yoelii str. 17XNL arginase (PY03443) partial mRNA Length = 1134 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 agcctccttttcagcctcctt 489 ||||||||||||||||||||| Sbjct: 324 agcctccttttcagcctcctt 304 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 agcctccttttcagcctcctt 489 ||||||||||||||||||||| Sbjct: 288 agcctccttttcagcctcctt 268
>gb|AC119816.5| Mus musculus chromosome 5, clone RP23-59B8, complete sequence Length = 186564 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 tctccttttcagcttcttcaa 467 ||||||||||||||||||||| Sbjct: 134891 tctccttttcagcttcttcaa 134871
>gb|AC160532.4| Mus musculus chromosome 5, clone RP24-158N23, complete sequence Length = 160144 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 tctccttttcagcttcttcaa 467 ||||||||||||||||||||| Sbjct: 53101 tctccttttcagcttcttcaa 53081
>gb|AC161593.2| Mus musculus BAC clone RP24-187P11 from chromosome 9, complete sequence Length = 155445 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 121 taggtggaattgtctgccctgctgt 145 |||||||||||||||||| |||||| Sbjct: 1183 taggtggaattgtctgccttgctgt 1159
>gb|AC165284.2| Mus musculus BAC clone RP24-378E14 from chromosome 14, complete sequence Length = 202193 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 tctccttttcagcttcttcaa 467 ||||||||||||||||||||| Sbjct: 35887 tctccttttcagcttcttcaa 35867
>gb|AC084365.16| Homo sapiens 12 BAC RP11-632B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188629 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 gtttcagtacatataaatctg 632 ||||||||||||||||||||| Sbjct: 160604 gtttcagtacatataaatctg 160624
>dbj|AK220714.1| Arabidopsis thaliana mRNA for calreticulin like protein, partial cds, clone: RAFL22-04-K13 Length = 392 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 gagcttccttatcttctctagcttt 444 ||||||||| ||||||||||||||| Sbjct: 130 gagcttcctcatcttctctagcttt 106
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 cttttcagcttcttcaaaagc 471 ||||||||||||||||||||| Sbjct: 271308 cttttcagcttcttcaaaagc 271288
>gb|AC068789.16|AC068789 Homo sapiens 12 BAC RP11-1049A21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 34150 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 443 ttcctctccttttcagcttct 463 ||||||||||||||||||||| Sbjct: 19022 ttcctctccttttcagcttct 19002
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgct 398 ||||||||||||||||||||| Sbjct: 1123808 ccctctctctcctccgtcgct 1123788 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 7620220 ccctctctctcctccgtcgc 7620239 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 6258349 ccctctctctcctccgtcgc 6258330 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 6251342 ccctctctctcctccgtcgc 6251323 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 3264060 ccctctctctcctccgtcgc 3264041 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 1882878 ccctctctctcctccgtcgc 1882897
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgct 398 ||||||||||||||||||||| Sbjct: 50921 ccctctctctcctccgtcgct 50901
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgct 398 ||||||||||||||||||||| Sbjct: 131962 ccctctctctcctccgtcgct 131942
>dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1310_F05 Length = 107916 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgct 398 ||||||||||||||||||||| Sbjct: 12402 ccctctctctcctccgtcgct 12382
>gb|AC002462.1|AC002462 Human BAC clone CTA-210I4, complete sequence Length = 100258 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 gtttcagtacatataaatctg 632 ||||||||||||||||||||| Sbjct: 63651 gtttcagtacatataaatctg 63671
>dbj|AB093603.1| Turnip mosaic virus gene for polyprotein, complete cds, isolate:PV0104 Length = 9798 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 ctttcctctccttttcagctt 461 ||||||||||||||||||||| Sbjct: 8786 ctttcctctccttttcagctt 8766
>gb|AC164438.3| Mus musculus BAC clone RP23-62L19 from chromosome 9, complete sequence Length = 205793 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 121 taggtggaattgtctgccctgctgt 145 |||||||||||||||||| |||||| Sbjct: 147455 taggtggaattgtctgccttgctgt 147431 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 121 taggtggaattgtctgccctgctgt 145 |||||||||||||||||| |||||| Sbjct: 37942 taggtggaattgtctgccttgctgt 37918
>emb|CT025696.10| Mouse DNA sequence from clone RP24-344B20 on chromosome 9, complete sequence Length = 163726 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 taggtggaattgtctgccctgctgt 145 |||||||||||||||||| |||||| Sbjct: 13815 taggtggaattgtctgccttgctgt 13839
>dbj|AB076532.1| Turnip mosaic virus CP gene for polyprotein, partial cds, isolate:PV0104 Length = 864 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 ctttcctctccttttcagctt 461 ||||||||||||||||||||| Sbjct: 64 ctttcctctccttttcagctt 44
>gb|AY739095.1| Takifugu rubripes frMCM8, frQ9UJA2, frPLCB1, frAL834445, frCDC5L, and frSUPTH3 genes, complete sequence; frRUNT (frRUNT) gene, complete cds; and frFSTL6 gene, complete sequence Length = 109075 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tttcctctccttttcagctt 461 |||||||||||||||||||| Sbjct: 67444 tttcctctccttttcagctt 67425
>gb|AC084385.5| Mus musculus chromosome 15 clone RP23-54K18, complete sequence Length = 203712 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 384 ctctcctccgtcgctctccttcctccct 411 ||||||||| || ||||||||||||||| Sbjct: 105824 ctctcctccatccctctccttcctccct 105797
>ref|XM_483270.1| Oryza sativa (japonica cultivar-group), mRNA Length = 369 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 299 ccctctctctcctccgtcgc 280
>ref|XM_481495.1| Oryza sativa (japonica cultivar-group), mRNA Length = 705 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 620 ccctctctctcctccgtcgc 601
>ref|XM_481494.1| Oryza sativa (japonica cultivar-group), mRNA Length = 654 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 573 ccctctctctcctccgtcgc 554
>ref|XM_475196.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1956 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 975 ccctctctctcctccgtcgc 956
>ref|NM_195513.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0082N11.11), mRNA Length = 768 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 683 ccctctctctcctccgtcgc 664
>ref|XM_464293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 378 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 293 ccctctctctcctccgtcgc 274
>ref|XM_450227.1| Oryza sativa (japonica cultivar-group), mRNA Length = 318 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 237 ccctctctctcctccgtcgc 218
>ref|XM_450131.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 495 ccctctctctcctccgtcgc 476
>ref|NM_193886.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 540 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 106 ccctctctctcctccgtcgc 125
>ref|NM_190584.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 756 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 295 ccctctctctcctccgtcgc 314
>ref|NM_192932.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 447 ccctctctctcctccgtcgc 428
>ref|NM_193276.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 720 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 471 ccctctctctcctccgtcgc 452
>gb|AY360384.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0079I01, complete sequence Length = 178920 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 66762 ccctctctctcctccgtcgc 66743
>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16, complete sequence Length = 164501 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 156274 ccctctctctcctccgtcgc 156255
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tttcctctccttttcagctt 461 |||||||||||||||||||| Sbjct: 1693027 tttcctctccttttcagctt 1693046
>gb|AY360387.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0003M24, complete sequence Length = 150085 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 107976 ccctctctctcctccgtcgc 107995 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 98834 ccctctctctcctccgtcgc 98853
>gb|AC145272.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0002L02, complete sequence Length = 165685 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 104607 ccctctctctcctccgtcgc 104626
>gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, complete sequence Length = 188758 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 ctgctgtcacataggaatgatctt 162 |||||||||| ||||||||||||| Sbjct: 110186 ctgctgtcacttaggaatgatctt 110163
>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04, complete sequence Length = 95383 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 ctctctctcctccgtcgctctcct 403 ||||||| |||||||||||||||| Sbjct: 56337 ctctctcccctccgtcgctctcct 56360
>gb|AC137923.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0066C04, complete sequence Length = 133944 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 17584 ccctctctctcctccgtcgc 17603
>gb|AC135957.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0037P02 map E61794SA, complete sequence Length = 131645 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 100304 ccctctctctcctccgtcgc 100323
>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0086N07 map S790A, complete sequence Length = 178523 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 158570 ccctctctctcctccgtcgc 158551
>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0095J10 map near S6115, complete sequence Length = 123717 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 97407 ccctctctctcctccgtcgc 97426
>gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072N24 map C61883S, complete sequence Length = 163337 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 11223 ccctctctctcctccgtcgc 11204
>gb|AC120528.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014L17 map C996B, complete sequence Length = 78835 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 5154 ccctctctctcctccgtcgc 5173
>gb|AC121517.7| Mus musculus chromosome 15, clone RP23-120A12, complete sequence Length = 222681 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 384 ctctcctccgtcgctctccttcctccct 411 ||||||||| || ||||||||||||||| Sbjct: 199261 ctctcctccatccctctccttcctccct 199288
>gb|AC136228.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0672D07, complete sequence Length = 136465 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 50092 ccctctctctcctccgtcgc 50111
>gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0018H09, complete sequence Length = 155329 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 105075 ccctctctctcctccgtcgc 105094
>gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genomic sequence, complete sequence Length = 137220 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 25882 ccctctctctcctccgtcgc 25901
>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete sequence Length = 112892 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 atcacccctctctctcctcc 392 |||||||||||||||||||| Sbjct: 60358 atcacccctctctctcctcc 60377
>gb|AC137622.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0118N20, complete sequence Length = 146139 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 3229 ccctctctctcctccgtcgc 3248
>gb|AC132003.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091D07, complete sequence Length = 144652 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 107857 ccctctctctcctccgtcgc 107838
>gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0409G01, complete sequence Length = 143263 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 108216 ccctctctctcctccgtcgc 108235
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 65207 ccctctctctcctccgtcgc 65226
>gb|AC137607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0006O14, complete sequence Length = 142764 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 80744 ccctctctctcctccgtcgc 80763
>gb|AC135923.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0479C09, complete sequence Length = 156776 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 126605 ccctctctctcctccgtcgc 126586
>gb|AC135919.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0014F09, complete sequence Length = 151345 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 22252 ccctctctctcctccgtcgc 22233
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 atcacccctctctctcctcc 392 |||||||||||||||||||| Sbjct: 29789103 atcacccctctctctcctcc 29789084 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 17303505 ccctctctctcctccgtcgc 17303524
>gb|AC163107.3| Mus musculus BAC clone RP23-156A21 from chromosome 16, complete sequence Length = 221691 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 tctccttttcagcttcttca 466 |||||||||||||||||||| Sbjct: 175055 tctccttttcagcttcttca 175074
>gb|AY262256.1| Danio rerio delta opioid receptor (or4) mRNA, complete cds Length = 2364 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 31 tgtttacaaaaggaagcacatcgctgac 58 ||||| |||||||||| ||||||||||| Sbjct: 1845 tgttttcaaaaggaagaacatcgctgac 1818
>gb|AC144509.3| Mus musculus BAC clone RP23-394G5 from chromosome 5, complete sequence Length = 181316 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 377 cccctctctctcctccgtcgctctccttcctc 408 |||||||||||||||| || ||||| |||||| Sbjct: 88399 cccctctctctcctccctctctctctttcctc 88430
>gb|AC126427.4| Mus musculus BAC clone RP24-365B12 from chromosome 15, complete sequence Length = 151506 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ctccttttcagcttcttcaa 467 |||||||||||||||||||| Sbjct: 3839 ctccttttcagcttcttcaa 3858
>ref|XM_650149.1| Entamoeba histolytica HM-1:IMSS calreticulin (33.t00005) partial mRNA Length = 1170 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 572 gcttttacctgccaaacttcaattccaatata 603 ||||| || |||||||| |||||||||||||| Sbjct: 947 gctttaacttgccaaacatcaattccaatata 916
>gb|AC124134.8| Mus musculus chromosome 12, clone RP23-235G12, complete sequence Length = 220574 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ctctccttcctcccttgctt 416 |||||||||||||||||||| Sbjct: 182513 ctctccttcctcccttgctt 182494
>gb|AC146310.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1082A06, complete sequence Length = 135774 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 42440 ccctctctctcctccgtcgc 42459
>emb|AL389915.19| Human DNA sequence from clone RP11-438P9 on chromosome 9 Contains a ribosomal protein S16 (RPS16) pseudogene, a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene and a CpG island, complete sequence Length = 199601 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 431 tcttctctagctttcctctccttt 454 |||||||| ||||||||||||||| Sbjct: 149231 tcttctcttgctttcctctccttt 149254
>emb|AL353146.9| Human DNA sequence from clone RP11-168O10 on chromosome 10 Contains the IFIT1 gene for interferon-induced protein with tetratricopeptide repeats 1, the 5' end of a variant of the LIPA gene for lipase A lysosomal acid cholesterol esterase (Wolman disease), the gene for retinoic acid- and interferon-inducible protein (58kD) (RI58), a novel gene, the gene for a novel protein similar to monocarboxylate, the 3' end of a novel gene and a CpG island, complete sequence Length = 126887 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tccttcctcccttgcttgtt 419 |||||||||||||||||||| Sbjct: 121628 tccttcctcccttgcttgtt 121609
>emb|AL158070.11| Human DNA sequence from clone RP11-235C23 on chromosome 9q31.1-31.3 Contains part of a pseudogene similar to KIAA1272, KIAA0884, Drosophila CG5521 and rat Tulip 1 and 2 proteins, the 3' end of the CSDUFD1 gene for cystatin and DUF19 domain containing 1, a novel gene, the FCMD gene for Fukuyama type congenital muscular dystrophy protein, the TAL2 gene for T-cell acute lymphocytic leukemia 2 protein and two CpG islands, complete sequence Length = 167005 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 gctctccttcctcccttgct 415 |||||||||||||||||||| Sbjct: 135525 gctctccttcctcccttgct 135544
>gb|AC098022.5| Rattus norvegicus 7 BAC CH230-53D11 (Children's Hospital Oakland Research Institute) complete sequence Length = 233080 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 624 ataaatctggatcatcctca 643 |||||||||||||||||||| Sbjct: 162172 ataaatctggatcatcctca 162191
>gb|AC116546.1| Homo sapiens 3 BAC RP11-312H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160421 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 gaggtttcagtacatataaa 628 |||||||||||||||||||| Sbjct: 77368 gaggtttcagtacatataaa 77349
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 138579 ccctctctctcctccgtcgc 138560
>emb|AL662941.3|OSJN00147 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074B10, complete sequence Length = 165400 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 63176 ccctctctctcctccgtcgc 63157
>emb|CR626868.8| Zebrafish DNA sequence from clone DKEY-164P4 in linkage group 14, complete sequence Length = 75430 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 ttcaattccaatatacttca 608 |||||||||||||||||||| Sbjct: 74305 ttcaattccaatatacttca 74324
>emb|BX511257.16| Zebrafish DNA sequence from clone DKEY-280E21 in linkage group 14, complete sequence Length = 166973 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 ttcaattccaatatacttca 608 |||||||||||||||||||| Sbjct: 875 ttcaattccaatatacttca 894
>gb|AC131961.1| Drosophila pseudoobscura FOSMID DPSF1-548A3 (Children's Hospital Oakland Research Institute Drosophila pseudoobscura FOSMID Library) complete sequence Length = 39990 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 gaacacttcaattattggcagcaa 224 ||||||||||||| |||||||||| Sbjct: 38135 gaacacttcaatttttggcagcaa 38112
>gb|AC117395.5| Homo sapiens 3 BAC RP11-651P23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172715 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 421 agcttccttatc--ttctctagctttcctct 449 |||||||||||| ||||||||||||||||| Sbjct: 137391 agcttccttatcacttctctagctttcctct 137361
>gb|AC114795.5| Homo sapiens BAC clone RP11-681A4 from 4, complete sequence Length = 8360 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 452 ttttcagcttcttcaaaagcctcctttt 479 ||||||| |||||| ||||||||||||| Sbjct: 7254 ttttcagattcttctaaagcctcctttt 7227
>dbj|AB198868.1| Salicornia europaea SeFLA mRNA for putative fasciclin-like arabinogalactan protein, complete cds Length = 1765 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ctctctctcctccgtcgctc 399 |||||||||||||||||||| Sbjct: 1338 ctctctctcctccgtcgctc 1319
>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic sequence, complete sequence Length = 147289 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 42729 ccctctctctcctccgtcgc 42710
>gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0082N11, from chromosome 10, complete sequence Length = 183345 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 39226 ccctctctctcctccgtcgc 39207
>gb|AC147845.3| Saimiri boliviensis boliviensis clone CH254-335K11, complete sequence Length = 222317 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tttcctctccttttcagctt 461 |||||||||||||||||||| Sbjct: 157587 tttcctctccttttcagctt 157606
>emb|CR386602.1| Gallus gallus finished cDNA, clone ChEST293j21 Length = 1156 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 587 acttcaattccaatatacttcaga 610 |||||||||||||||| ||||||| Sbjct: 364 acttcaattccaatatccttcaga 341
>gb|AC146883.3| Callithrix jacchus clone CH259-225J7, complete sequence Length = 216802 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tttcctctccttttcagctt 461 |||||||||||||||||||| Sbjct: 164636 tttcctctccttttcagctt 164655
>tpg|BK000358.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M78 transposase gene, complete cds Length = 14306 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 11583 ccctctctctcctccgtcgc 11564
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 16331924 ccctctctctcctccgtcgc 16331905 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 10342531 ccctctctctcctccgtcgc 10342550 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 9279147 ccctctctctcctccgtcgc 9279128 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 9180553 ccctctctctcctccgtcgc 9180534 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 8629092 ccctctctctcctccgtcgc 8629073 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 8614494 ccctctctctcctccgtcgc 8614475 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 3158737 ccctctctctcctccgtcgc 3158718
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 14418459 ccctctctctcctccgtcgc 14418478 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 13764906 ccctctctctcctccgtcgc 13764925 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 13756036 ccctctctctcctccgtcgc 13756055 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 10921043 ccctctctctcctccgtcgc 10921062 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 5930015 ccctctctctcctccgtcgc 5930034
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 11588505 ccctctctctcctccgtcgc 11588524 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 7405362 ccctctctctcctccgtcgc 7405343
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 25185007 ccctctctctcctccgtcgc 25184988 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 14022829 ccctctctctcctccgtcgc 14022810 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 13636978 ccctctctctcctccgtcgc 13636997 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 13084617 ccctctctctcctccgtcgc 13084598 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 13075475 ccctctctctcctccgtcgc 13075456 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 12486959 ccctctctctcctccgtcgc 12486940
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 15099666 ccctctctctcctccgtcgc 15099685 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 14915058 ccctctctctcctccgtcgc 14915077 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 10697475 ccctctctctcctccgtcgc 10697494
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 atcacccctctctctcctcc 392 |||||||||||||||||||| Sbjct: 29880525 atcacccctctctctcctcc 29880506 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 17297046 ccctctctctcctccgtcgc 17297065
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 28054447 ccctctctctcctccgtcgc 28054428 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 19792466 ccctctctctcctccgtcgc 19792485 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 3884183 ccctctctctcctccgtcgc 3884202
>emb|BX842602.1|OSJN00295 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1234D02, complete sequence Length = 134041 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 21795 ccctctctctcctccgtcgc 21814
>emb|AL731578.2|OSJN00229 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017P10, complete sequence Length = 175563 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 166750 ccctctctctcctccgtcgc 166769
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 tttcctctccttttcagcttcttc 465 ||||||| |||||||||||||||| Sbjct: 234685 tttcctcgccttttcagcttcttc 234662
>gb|AC096652.1| Homo sapiens BAC clone RP11-16N2 from 4, complete sequence Length = 93274 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 452 ttttcagcttcttcaaaagcctcctttt 479 ||||||| |||||| ||||||||||||| Sbjct: 894 ttttcagattcttctaaagcctcctttt 867
>gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome 13, complete sequence Length = 204294 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ctctccttttcagcttcttc 465 |||||||||||||||||||| Sbjct: 92299 ctctccttttcagcttcttc 92280
>gb|AC151729.6| Mus musculus BAC clone RP24-74F2 from chromosome 9, complete sequence Length = 224139 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ggtgtcgatcacccctctctctcc 389 ||||||||||||||||||| |||| Sbjct: 46080 ggtgtcgatcacccctctccctcc 46103
>dbj|AP004360.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1166B08 Length = 147667 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 80434 ccctctctctcctccgtcgc 80415
>dbj|AP003681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158C05 Length = 145514 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 11933 ccctctctctcctccgtcgc 11914
>gb|AC012443.8| Homo sapiens BAC clone RP11-17G11 from 2, complete sequence Length = 153610 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 439 agctttcctctccttttcagcttc 462 ||||||||||||||||| |||||| Sbjct: 86530 agctttcctctccttttgagcttc 86553
>gb|AC092836.4| Homo sapiens BAC clone RP11-50B16 from 2, complete sequence Length = 165768 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 380 ctctctctcctccgtcgctctccttcctccct 411 |||||| |||||| |||||||||||| ||||| Sbjct: 116768 ctctctttcctccctcgctctccttcttccct 116799
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446B05 Length = 149145 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 80586 ccctctctctcctccgtcgc 80605
>gb|AC125041.2| Mus musculus BAC clone RP23-337J19 from chromosome 12, complete sequence Length = 202288 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ctctccttcctcccttgctt 416 |||||||||||||||||||| Sbjct: 136731 ctctccttcctcccttgctt 136750
>dbj|AP005189.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474B11 Length = 141702 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 140139 ccctctctctcctccgtcgc 140158
>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455H03 Length = 175947 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 122000 ccctctctctcctccgtcgc 121981
>dbj|AP006236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0029L04 Length = 117192 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 63946 ccctctctctcctccgtcgc 63927 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 35189 ccctctctctcctccgtcgc 35208
>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_A08 Length = 119304 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 98109 ccctctctctcctccgtcgc 98090
>dbj|AP003220.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0035I14 Length = 117919 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 80898 ccctctctctcctccgtcgc 80879
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416G11 Length = 138858 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 75271 ccctctctctcctccgtcgc 75252
>dbj|AP005818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0009H03 Length = 151685 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 146249 ccctctctctcctccgtcgc 146230 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 139242 ccctctctctcctccgtcgc 139223
>dbj|AP005562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1190_B07 Length = 140200 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 103632 ccctctctctcctccgtcgc 103613 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 96625 ccctctctctcctccgtcgc 96606
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 145739 ccctctctctcctccgtcgc 145758
>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0479H10 Length = 139874 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 73607 ccctctctctcctccgtcgc 73588
>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0677B10 Length = 134423 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 28516 ccctctctctcctccgtcgc 28535
>dbj|AP005916.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0066M12 Length = 162198 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 128635 ccctctctctcctccgtcgc 128654
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G07 Length = 149119 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 101017 ccctctctctcctccgtcgc 101036
>dbj|AP005725.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0025H18 Length = 176201 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 32046 ccctctctctcctccgtcgc 32065
>dbj|AP005444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H01 Length = 165634 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 105570 ccctctctctcctccgtcgc 105589
>dbj|AP005260.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0557D09 Length = 135315 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 26921 ccctctctctcctccgtcgc 26940
>dbj|AP006159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1157F01 Length = 181639 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 55228 ccctctctctcctccgtcgc 55247
>dbj|AP005447.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0035G02 Length = 159802 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 154663 ccctctctctcctccgtcgc 154682
>dbj|AP005407.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0019N02 Length = 152373 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 94424 ccctctctctcctccgtcgc 94443
>emb|AL935071.4|CNS08CCN Oryza sativa chromosome 12, . BAC OSJNBb0016C24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 87778 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 28213 ccctctctctcctccgtcgc 28232 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 19342 ccctctctctcctccgtcgc 19361
>emb|AL713910.2|CNS07YQB Oryza sativa chromosome 12, . BAC OSJNBa0042B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145118 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 98507 ccctctctctcctccgtcgc 98526 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 89637 ccctctctctcctccgtcgc 89656
>dbj|AP004041.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1115_A07 Length = 165126 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 90988 ccctctctctcctccgtcgc 90969
>dbj|AP006481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone: B1100F03 Length = 139217 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 65137 ccctctctctcctccgtcgc 65118 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 55995 ccctctctctcctccgtcgc 55976
>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_A06 Length = 176062 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 140515 ccctctctctcctccgtcgc 140534
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 82654 ccctctctctcctccgtcgc 82673
>dbj|AP005892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0011D16 Length = 177329 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 140373 ccctctctctcctccgtcgc 140354
>dbj|BS000015.1| Pan troglodytes chromosome 22 clone:PTB-017F24, map 22, complete sequences Length = 117746 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 622 atataaatctggatcatcctcaaa 645 |||||||||||||||||| ||||| Sbjct: 34825 atataaatctggatcatcttcaaa 34802
>dbj|AB016877.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLF18 Length = 74842 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 cttctccttcgaataatggaagat 278 ||||||||||||||||||| |||| Sbjct: 37043 cttctccttcgaataatggtagat 37020
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1168A08 Length = 138135 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 50130 ccctctctctcctccgtcgc 50111
>dbj|AP005254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0064I19 Length = 111644 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 89182 ccctctctctcctccgtcgc 89163
>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1717_A09 Length = 203132 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 44094 ccctctctctcctccgtcgc 44075
>dbj|AP004661.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048E12 Length = 152543 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 54720 ccctctctctcctccgtcgc 54701
>gb|AF222684.1|AF222684 Homo sapiens chromosome 21 BAC B194B7 map 21q11.2, complete sequence Length = 116459 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 622 atataaatctggatcatcctcaaa 645 |||||||||||||||||| ||||| Sbjct: 61648 atataaatctggatcatcttcaaa 61625
>emb|AM050264.1| Cercopis vulnerata mRNA for putative H3K9 methyltransferase (su(var)3-9 gene) Length = 1980 Score = 40.1 bits (20), Expect = 9.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 441 ctttcctctccttttcagcttcttcaaa 468 |||||||||| ||||||||||||||||| Sbjct: 1377 ctttcctctc-ttttcagcttcttcaaa 1351
>emb|AL163208.2|HS21C008 Homo sapiens chromosome 21 segment HS21C008 Length = 340000 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 622 atataaatctggatcatcctcaaa 645 |||||||||||||||||| ||||| Sbjct: 133325 atataaatctggatcatcttcaaa 133302
>dbj|AK062628.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-C05, full insert sequence Length = 705 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 atcacccctctctctcctcc 392 |||||||||||||||||||| Sbjct: 23 atcacccctctctctcctcc 42
>gb|AC117771.17| Mus musculus chromosome 1, clone RP24-512A5, complete sequence Length = 161292 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 ctgctgtcacataggaatgatctt 162 |||||||||| ||||||||||||| Sbjct: 87661 ctgctgtcacttaggaatgatctt 87684
>gb|AC151487.3| Aotus nancymaae clone CH258-321B24, complete sequence Length = 167396 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tttcctctccttttcagctt 461 |||||||||||||||||||| Sbjct: 18053 tttcctctccttttcagctt 18072
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 456 cagcttcttcaaaagcctcctttt 479 |||||||||||||| ||||||||| Sbjct: 1413678 cagcttcttcaaaatcctcctttt 1413655
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 11594945 ccctctctctcctccgtcgc 11594964 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 7409561 ccctctctctcctccgtcgc 7409542
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 14372743 ccctctctctcctccgtcgc 14372762 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 13719186 ccctctctctcctccgtcgc 13719205 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 13710316 ccctctctctcctccgtcgc 13710335 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 10920742 ccctctctctcctccgtcgc 10920761 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 5930008 ccctctctctcctccgtcgc 5930027
>emb|AL954152.5|CNS08CCQ Oryza sativa chromosome 12, . BAC OSJNBb0034E16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124204 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 70106 ccctctctctcctccgtcgc 70125
>emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065B15, complete sequence Length = 150007 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 89535 ccctctctctcctccgtcgc 89516 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 74937 ccctctctctcctccgtcgc 74918
>emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb0090H23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134370 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 125666 ccctctctctcctccgtcgc 125685
>emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062B06, complete sequence Length = 187154 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 176836 ccctctctctcctccgtcgc 176817
>emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618_C05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 169662 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 125660 ccctctctctcctccgtcgc 125679
>emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118101 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 98833 ccctctctctcctccgtcgc 98814
>emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G11 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155451 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 80565 ccctctctctcctccgtcgc 80584 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctctctctcctccgtcgc 397 |||||||||||||||||||| Sbjct: 71695 ccctctctctcctccgtcgc 71714
>gb|AC140202.3| Mus musculus BAC clone RP24-330O15 from 9, complete sequence Length = 136977 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ggtgtcgatcacccctctctctcc 389 ||||||||||||||||||| |||| Sbjct: 70430 ggtgtcgatcacccctctccctcc 70453
>gb|AC141482.4| Mus musculus BAC clone RP23-159C3 from 16, complete sequence Length = 180832 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 tctccttttcagcttcttca 466 |||||||||||||||||||| Sbjct: 108556 tctccttttcagcttcttca 108537
>gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, complete sequence Length = 214005 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctctccttttcagcttcttca 466 ||||||||| |||||||||||||| Sbjct: 170499 ttcctctccctttcagcttcttca 170522
>emb|AL844193.6| Zebrafish DNA sequence from clone DKEY-28J3, complete sequence Length = 210900 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 aaaatctctttatttgtatt 22 |||||||||||||||||||| Sbjct: 160432 aaaatctctttatttgtatt 160413
>gb|AC158363.2| Mus musculus BAC clone RP23-214J3 from chromosome 15, complete sequence Length = 228138 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ctccttttcagcttcttcaa 467 |||||||||||||||||||| Sbjct: 149542 ctccttttcagcttcttcaa 149561
>emb|AL928795.6| Mouse DNA sequence from clone RP23-38B1 on chromosome 2, complete sequence Length = 28716 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ctccttttcagcttcttcaa 467 |||||||||||||||||||| Sbjct: 20362 ctccttttcagcttcttcaa 20381
>ref|NM_212755.1| Danio rerio wu:fb12g05 (wu:fb12g05), mRNA Length = 2364 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 31 tgtttacaaaaggaagcacatcgctgac 58 ||||| |||||||||| ||||||||||| Sbjct: 1845 tgttttcaaaaggaagaacatcgctgac 1818 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,286,153 Number of Sequences: 3902068 Number of extensions: 7286153 Number of successful extensions: 160892 Number of sequences better than 10.0: 211 Number of HSP's better than 10.0 without gapping: 235 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 156642 Number of HSP's gapped (non-prelim): 4242 length of query: 696 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 673 effective length of database: 17,143,297,704 effective search space: 11537439354792 effective search space used: 11537439354792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
