| Clone Name | rbags39h13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U26545.1|HVU26545 Hordeum vulgare Mg-chelatase subunit (Xantha-h) mRNA, partial cds Length = 1141 Score = 1092 bits (551), Expect = 0.0 Identities = 595/605 (98%), Gaps = 6/605 (0%) Strand = Plus / Minus Query: 8 cgctcggtaacactgttttctatacaatgaagaatatagtttgataaaggatgaatcgcc 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1139 cgctcggtaacactgttttctatacaatgaagaatatagtttgataaaggatgaatcgcc 1080 Query: 68 aaaggttactataaaagtttacagccgaacaaaaagcctcctgccttactttgtggcaga 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1079 aaaggttactataaaagtttacagccgaacaaaaagcctcctgccttactttgtggcaga 1020 Query: 128 gaaacatttacctcgagaacaatctagccaaagacttcatagaacttctcaactacaagc 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1019 gaaacatttacctcgagaacaatctagccaaagacttcatagaacttctcaactacaagc 960 Query: 188 aagcccgagtcgattgattcgagcgggtctttacggagccgatgcctcaaa-cagttggg 246 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 959 aagcccgagtcgattgattcgagcgggtctttacggagccgatgcctcaaaacagt-ggg 901 Query: 247 aatcacagtggcaatgtcctccactgtcacgacgtcccttcctttcaagggcagccaacg 306 ||||||||||| ||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 900 aatcacagtggaaatgtcctccactgtcacgacgtccttccctttcaagg-cagccaacg 842 Query: 307 ccttggca---gccctgttagtgacaatgtctcctctgagtccatccacattcagctcgg 363 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 ccttggcataggccctgttagtgacaatgtctcctctgagtccatccacattcagctcgg 782 Query: 364 aacacacctgggatatcttaacccggagatcatggtcgagctgcacagaaccgaggttgc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 aacacacctgggatatcttaacccggagatcatggtcgagctgcacagaaccgaggttgc 722 Query: 424 tccgagcggatgtgatctgctcctggagcttatcttgctcctccaagtaggactgccgga 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 tccgagcggatgtgatctgctcctggagcttatcttgctcctccaagtaggactgccgga 662 Query: 484 acgttttcgggtccctgtcgaaccgagccctctcctccacaatcttcaccctcagctcgg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 acgttttcgggtccctgtcgaaccgagccctctcctccacaatcttcaccctcagctcgg 602 Query: 544 cgtccctgacggtgccaacctgcgcgtgcatcccgaaccggtccagcagctgcggccgga 603 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 601 cgtccctgacggtgccaacctgcgcgtgcatcccgaaccggtccaggagctgcggccgga 542 Query: 604 gctcg 608 ||||| Sbjct: 541 gctcg 537
>gb|DQ084026.1| Zea mays magnesium chelatase subunit I precursor (ChlI) gene, ChlI-W22 allele, partial cds Length = 1455 Score = 406 bits (205), Expect = e-110 Identities = 395/457 (86%), Gaps = 1/457 (0%) Strand = Plus / Minus Query: 151 ctagccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgag 210 ||||| |||||||||||| |||||||||| ||||| || |||||||| || ||||| || Sbjct: 1455 ctagctaaagacttcataaaacttctcaatgacaagtaaacccgagtcaatggattcaag 1396 Query: 211 cgggtctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccac 270 ||| || || ||||||||||||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 1395 cggatccttgcggagccgatgcctcaagcagtttggaatgacagtagcaatgtcctccac 1336 Query: 271 tgtcacgacgtcccttcctttcaagggcagccaacgccttggcagccctgttagtgacaa 330 || ||| ||||||||||||||| | |||||| ||||||||||||||||||||| |||| Sbjct: 1335 ggtgacgctgtcccttcctttcaacg-cagccagcgccttggcagccctgttagtcacaa 1277 Query: 331 tgtctcctctgagtccatccacattcagctcggaacacacctgggatatcttaacccgga 390 |||| |||||||||||||| || |||| ||| || ||||||| ||||||||| || |||| Sbjct: 1276 tgtcacctctgagtccatcaacgttcaactcagagcacaccttggatatcttgacacgga 1217 Query: 391 gatcatggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctgga 450 | |||||||| | |||||||| || ||||| ||||| || |||| ||||||| ||||| Sbjct: 1216 ggtcatggtcaatctgcacagcgccaaggttactccgtgcagatgatatctgctgctgga 1157 Query: 451 gcttatcttgctcctccaagtaggactgccggaacgttttcgggtccctgtcgaaccgag 510 |||| || ||||| || ||| |||| |||||||| ||||| ||||||||||| |||| Sbjct: 1156 gcttctcctgctcgtcatggtacgactcacggaacgtcttcggatccctgtcgaaacgag 1097 Query: 511 ccctctcctccacaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgt 570 ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 1096 ccctctcctccacgatcttcaccctgagctcggcgtccctgacggtaccaacctgcgcgt 1037 Query: 571 gcatcccgaaccggtccagcagctgcggccggagctc 607 ||||||||||||||||||||||||| |||| |||||| Sbjct: 1036 gcatcccgaaccggtccagcagctggggcctgagctc 1000
>gb|DQ084025.1| Zea mays magnesium chelatase subunit I precursor (ChlI) mRNA, ChlI-W22 allele, complete cds Length = 1248 Score = 406 bits (205), Expect = e-110 Identities = 395/457 (86%), Gaps = 1/457 (0%) Strand = Plus / Minus Query: 151 ctagccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgag 210 ||||| |||||||||||| |||||||||| ||||| || |||||||| || ||||| || Sbjct: 1248 ctagctaaagacttcataaaacttctcaatgacaagtaaacccgagtcaatggattcaag 1189 Query: 211 cgggtctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccac 270 ||| || || ||||||||||||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 1188 cggatccttgcggagccgatgcctcaagcagtttggaatgacagtagcaatgtcctccac 1129 Query: 271 tgtcacgacgtcccttcctttcaagggcagccaacgccttggcagccctgttagtgacaa 330 || ||| ||||||||||||||| | |||||| ||||||||||||||||||||| |||| Sbjct: 1128 ggtgacgctgtcccttcctttcaacg-cagccagcgccttggcagccctgttagtcacaa 1070 Query: 331 tgtctcctctgagtccatccacattcagctcggaacacacctgggatatcttaacccgga 390 |||| |||||||||||||| || |||| ||| || ||||||| ||||||||| || |||| Sbjct: 1069 tgtcacctctgagtccatcaacgttcaactcagagcacaccttggatatcttgacacgga 1010 Query: 391 gatcatggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctgga 450 | |||||||| | |||||||| || ||||| ||||| || |||| ||||||| ||||| Sbjct: 1009 ggtcatggtcaatctgcacagcgccaaggttactccgtgcagatgatatctgctgctgga 950 Query: 451 gcttatcttgctcctccaagtaggactgccggaacgttttcgggtccctgtcgaaccgag 510 |||| || ||||| || ||| |||| |||||||| ||||| ||||||||||| |||| Sbjct: 949 gcttctcctgctcgtcatggtacgactcacggaacgtcttcggatccctgtcgaaacgag 890 Query: 511 ccctctcctccacaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgt 570 ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 889 ccctctcctccacgatcttcaccctgagctcggcgtccctgacggtaccaacctgcgcgt 830 Query: 571 gcatcccgaaccggtccagcagctgcggccggagctc 607 ||||||||||||||||||||||||| |||| |||||| Sbjct: 829 gcatcccgaaccggtccagcagctggggcctgagctc 793
>gb|AC084767.11| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0057P11 map R606A, complete sequence Length = 163580 Score = 335 bits (169), Expect = 1e-88 Identities = 428/513 (83%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 76103 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 76044 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 76043 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 75984 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || ||||||||||||||||| || || Sbjct: 75983 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcctctacagtg 75924 Query: 275 acgacgtcccttcctttcaagggcagccaacgccttggcagccctgttagtgacaatgtc 334 || |||||| ||||| | | || |||||||||||||||||||||||||| |||||||| Sbjct: 75923 acagtgtccctgcctttga-gtgctgccaacgccttggcagccctgttagtcacaatgtc 75865 Query: 335 tcctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatc 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || ||||| Sbjct: 75864 ccctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatc 75805 Query: 395 atggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctt 454 |||||| | |||||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 75804 atggtcaatctgcacagcaccaaggttactccgagcagatgaaatctgctgctggagctt 75745 Query: 455 atcttgctcctccaagtaggactgccggaacgttttcgggtccctgtcgaaccgagccct 514 ||||| |||||||||||||||| ||||||| || || ||||||||||||||||| || Sbjct: 75744 gtcttgttcctccaagtaggactcacggaacgcctttggatccctgtcgaaccgagctct 75685 Query: 515 ctcctccacaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcat 574 ||| || ||||| |||||||| || || || |||||||| || ||||||||||||||||| Sbjct: 75684 ctcttcaacaattttcaccctgagttcagcatccctgacagtaccaacctgcgcgtgcat 75625 Query: 575 cccgaaccggtccagcagctgcggccggagctc 607 || |||||||| |||||||| ||||||||||| Sbjct: 75624 gccaaaccggtcaagcagctgtggccggagctc 75592
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 335 bits (169), Expect = 1e-88 Identities = 428/513 (83%), Gaps = 1/513 (0%) Strand = Plus / Plus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 20055910 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 20055969 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 20055970 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 20056029 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || ||||||||||||||||| || || Sbjct: 20056030 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcctctacagtg 20056089 Query: 275 acgacgtcccttcctttcaagggcagccaacgccttggcagccctgttagtgacaatgtc 334 || |||||| ||||| | | || |||||||||||||||||||||||||| |||||||| Sbjct: 20056090 acagtgtccctgcctttga-gtgctgccaacgccttggcagccctgttagtcacaatgtc 20056148 Query: 335 tcctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatc 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || ||||| Sbjct: 20056149 ccctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatc 20056208 Query: 395 atggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctt 454 |||||| | |||||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 20056209 atggtcaatctgcacagcaccaaggttactccgagcagatgaaatctgctgctggagctt 20056268 Query: 455 atcttgctcctccaagtaggactgccggaacgttttcgggtccctgtcgaaccgagccct 514 ||||| |||||||||||||||| ||||||| || || ||||||||||||||||| || Sbjct: 20056269 gtcttgttcctccaagtaggactcacggaacgcctttggatccctgtcgaaccgagctct 20056328 Query: 515 ctcctccacaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcat 574 ||| || ||||| |||||||| || || || |||||||| || ||||||||||||||||| Sbjct: 20056329 ctcttcaacaattttcaccctgagttcagcatccctgacagtaccaacctgcgcgtgcat 20056388 Query: 575 cccgaaccggtccagcagctgcggccggagctc 607 || |||||||| |||||||| ||||||||||| Sbjct: 20056389 gccaaaccggtcaagcagctgtggccggagctc 20056421
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 335 bits (169), Expect = 1e-88 Identities = 428/513 (83%), Gaps = 1/513 (0%) Strand = Plus / Plus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 20048938 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 20048997 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 20048998 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 20049057 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || ||||||||||||||||| || || Sbjct: 20049058 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcctctacagtg 20049117 Query: 275 acgacgtcccttcctttcaagggcagccaacgccttggcagccctgttagtgacaatgtc 334 || |||||| ||||| | | || |||||||||||||||||||||||||| |||||||| Sbjct: 20049118 acagtgtccctgcctttga-gtgctgccaacgccttggcagccctgttagtcacaatgtc 20049176 Query: 335 tcctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatc 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || ||||| Sbjct: 20049177 ccctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatc 20049236 Query: 395 atggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctt 454 |||||| | |||||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 20049237 atggtcaatctgcacagcaccaaggttactccgagcagatgaaatctgctgctggagctt 20049296 Query: 455 atcttgctcctccaagtaggactgccggaacgttttcgggtccctgtcgaaccgagccct 514 ||||| |||||||||||||||| ||||||| || || ||||||||||||||||| || Sbjct: 20049297 gtcttgttcctccaagtaggactcacggaacgcctttggatccctgtcgaaccgagctct 20049356 Query: 515 ctcctccacaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcat 574 ||| || ||||| |||||||| || || || |||||||| || ||||||||||||||||| Sbjct: 20049357 ctcttcaacaattttcaccctgagttcagcatccctgacagtaccaacctgcgcgtgcat 20049416 Query: 575 cccgaaccggtccagcagctgcggccggagctc 607 || |||||||| |||||||| ||||||||||| Sbjct: 20049417 gccaaaccggtcaagcagctgtggccggagctc 20049449
>dbj|AK104435.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D12, full insert sequence Length = 1504 Score = 335 bits (169), Expect = 1e-88 Identities = 428/513 (83%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 1324 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 1265 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 1264 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 1205 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || ||||||||||||||||| || || Sbjct: 1204 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcctctacagtg 1145 Query: 275 acgacgtcccttcctttcaagggcagccaacgccttggcagccctgttagtgacaatgtc 334 || |||||| ||||| | | || |||||||||||||||||||||||||| |||||||| Sbjct: 1144 acagtgtccctgcctttga-gtgctgccaacgccttggcagccctgttagtcacaatgtc 1086 Query: 335 tcctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatc 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || ||||| Sbjct: 1085 ccctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatc 1026 Query: 395 atggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctt 454 |||||| | |||||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 1025 atggtcaatctgcacagcaccaaggttactccgagcagatgaaatctgctgctggagctt 966 Query: 455 atcttgctcctccaagtaggactgccggaacgttttcgggtccctgtcgaaccgagccct 514 ||||| |||||||||||||||| ||||||| || || ||||||||||||||||| || Sbjct: 965 gtcttgttcctccaagtaggactcacggaacgcctttggatccctgtcgaaccgagctct 906 Query: 515 ctcctccacaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcat 574 ||| || ||||| |||||||| || || || |||||||| || ||||||||||||||||| Sbjct: 905 ctcttcaacaattttcaccctgagttcagcatccctgacagtaccaacctgcgcgtgcat 846 Query: 575 cccgaaccggtccagcagctgcggccggagctc 607 || |||||||| |||||||| ||||||||||| Sbjct: 845 gccaaaccggtcaagcagctgtggccggagctc 813
>dbj|AK060389.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-H01, full insert sequence Length = 1481 Score = 335 bits (169), Expect = 1e-88 Identities = 428/513 (83%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 1363 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 1304 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 1303 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 1244 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || ||||||||||||||||| || || Sbjct: 1243 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcctctacagtg 1184 Query: 275 acgacgtcccttcctttcaagggcagccaacgccttggcagccctgttagtgacaatgtc 334 || |||||| ||||| | | || |||||||||||||||||||||||||| |||||||| Sbjct: 1183 acagtgtccctgcctttga-gtgctgccaacgccttggcagccctgttagtcacaatgtc 1125 Query: 335 tcctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatc 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || ||||| Sbjct: 1124 ccctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatc 1065 Query: 395 atggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctt 454 |||||| | |||||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 1064 atggtcaatctgcacagcaccaaggttactccgagcagatgaaatctgctgctggagctt 1005 Query: 455 atcttgctcctccaagtaggactgccggaacgttttcgggtccctgtcgaaccgagccct 514 ||||| |||||||||||||||| ||||||| || || ||||||||||||||||| || Sbjct: 1004 gtcttgttcctccaagtaggactcacggaacgcctttggatccctgtcgaaccgagctct 945 Query: 515 ctcctccacaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcat 574 ||| || ||||| |||||||| || || || |||||||| || ||||||||||||||||| Sbjct: 944 ctcttcaacaattttcaccctgagttcagcatccctgacagtaccaacctgcgcgtgcat 885 Query: 575 cccgaaccggtccagcagctgcggccggagctc 607 || |||||||| |||||||| ||||||||||| Sbjct: 884 gccaaaccggtcaagcagctgtggccggagctc 852
>ref|XM_462936.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1286 Score = 333 bits (168), Expect = 4e-88 Identities = 400/476 (84%), Gaps = 1/476 (0%) Strand = Plus / Minus Query: 132 catttacctcgagaacaatctagccaaagacttcatagaacttctcaactacaagcaagc 191 |||||||||| |||| ||| ||| ||||||||||| ||||||||||| || ||||| | Sbjct: 1267 catttacctccagaataatttaggtgaagacttcataaaacttctcaaccacgagcaatc 1208 Query: 192 ccgagtcgattgattcgagcgggtctttacggagccgatgcctcaaacagttgggaatca 251 | ||||| |||||||| || ||||| || || |||||||||||||| |||||||| || | Sbjct: 1207 ctgagtcaattgattcaagtgggtccttccgaagccgatgcctcaagcagttggggataa 1148 Query: 252 cagtggcaatgtcctccactgtcacgacgtcccttcctttcaagggcagccaacgccttg 311 |||||||||||||||| || || || |||||| ||||| | | || |||||||||||| Sbjct: 1147 cagtggcaatgtcctctacagtgacagtgtccctgcctttga-gtgctgccaacgccttg 1089 Query: 312 gcagccctgttagtgacaatgtctcctctgagtccatccacattcagctcggaacacacc 371 |||||||||||||| |||||||| ||||| | |||||| ||||||| ||| | |||||| Sbjct: 1088 gcagccctgttagtcacaatgtcccctcttaatccatcaacattcaactctgcacacact 1029 Query: 372 tgggatatcttaacccggagatcatggtcgagctgcacagaaccgaggttgctccgagcg 431 | || |||||||| || ||||||||||| | |||||||| ||| ||||| |||||||| Sbjct: 1028 ttagaaatcttaacacgaagatcatggtcaatctgcacagcaccaaggttactccgagca 969 Query: 432 gatgtgatctgctcctggagcttatcttgctcctccaagtaggactgccggaacgttttc 491 |||| ||||||| ||||||||| ||||| |||||||||||||||| ||||||| || Sbjct: 968 gatgaaatctgctgctggagcttgtcttgttcctccaagtaggactcacggaacgccttt 909 Query: 492 gggtccctgtcgaaccgagccctctcctccacaatcttcaccctcagctcggcgtccctg 551 || ||||||||||||||||| ||||| || ||||| |||||||| || || || |||||| Sbjct: 908 ggatccctgtcgaaccgagctctctcttcaacaattttcaccctgagttcagcatccctg 849 Query: 552 acggtgccaacctgcgcgtgcatcccgaaccggtccagcagctgcggccggagctc 607 || || ||||||||||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 848 acagtaccaacctgcgcgtgcatgccaaaccggtcaagcagctgtggccggagctc 793
>dbj|AK071134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K03, full insert sequence Length = 1576 Score = 327 bits (165), Expect = 2e-86 Identities = 427/513 (83%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 1346 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 1287 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 1286 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 1227 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || ||||||||||||||||| || || Sbjct: 1226 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcctctacagtg 1167 Query: 275 acgacgtcccttcctttcaagggcagccaacgccttggcagccctgttagtgacaatgtc 334 || |||||| ||||| | | || |||||||||||||||||||||||||| |||||||| Sbjct: 1166 acagtgtccctgcctttga-gtgctgccaacgccttggcagccctgttagtcacaatgtc 1108 Query: 335 tcctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatc 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || ||||| Sbjct: 1107 ccctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatc 1048 Query: 395 atggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctt 454 |||||| | || ||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 1047 atggtcaatcttcacagcaccaaggttactccgagcagatgaaatctgctgctggagctt 988 Query: 455 atcttgctcctccaagtaggactgccggaacgttttcgggtccctgtcgaaccgagccct 514 ||||| |||||||||||||||| ||||||| || || ||||||||||||||||| || Sbjct: 987 gtcttgttcctccaagtaggactcacggaacgcctttggatccctgtcgaaccgagctct 928 Query: 515 ctcctccacaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcat 574 ||| || ||||| |||||||| || || || |||||||| || ||||||||||||||||| Sbjct: 927 ctcttcaacaattttcaccctgagttcagcatccctgacagtaccaacctgcgcgtgcat 868 Query: 575 cccgaaccggtccagcagctgcggccggagctc 607 || |||||||| |||||||| ||||||||||| Sbjct: 867 gccaaaccggtcaagcagctgtggccggagctc 835
>dbj|AK070720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056M13, full insert sequence Length = 2111 Score = 327 bits (165), Expect = 2e-86 Identities = 427/513 (83%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 95 aacaaaaagcctcctgccttactttgtggcagagaaacatttacctcgagaacaatctag 154 ||||||| ||||||||| ||||| || ||| || |||||||||| |||| ||| ||| Sbjct: 1341 aacaaaagccctcctgccgaactttctgatagaaaaccatttacctccagaataatttag 1282 Query: 155 ccaaagacttcatagaacttctcaactacaagcaagcccgagtcgattgattcgagcggg 214 ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct: 1281 gtgaagacttcataaaacttctcaaccacgagcaatcctgagtcaattgattcaagtggg 1222 Query: 215 tctttacggagccgatgcctcaaacagttgggaatcacagtggcaatgtcctccactgtc 274 || || || |||||||||||||| |||||||| || |||||||||||||| || || || Sbjct: 1221 tccttccgaagccgatgcctcaagcagttggggataacagtggcaatgtcttctacagtg 1162 Query: 275 acgacgtcccttcctttcaagggcagccaacgccttggcagccctgttagtgacaatgtc 334 || |||||| ||||| | | || |||||||||||||||||||||||||| |||||||| Sbjct: 1161 acagtgtccctgcctttga-gtgctgccaacgccttggcagccctgttagtcacaatgtc 1103 Query: 335 tcctctgagtccatccacattcagctcggaacacacctgggatatcttaacccggagatc 394 ||||| | |||||| ||||||| ||| | |||||| | || |||||||| || ||||| Sbjct: 1102 ccctcttaatccatcaacattcaactctgcacacactttagaaatcttaacacgaagatc 1043 Query: 395 atggtcgagctgcacagaaccgaggttgctccgagcggatgtgatctgctcctggagctt 454 |||||| | |||||||| ||| ||||| |||||||| |||| ||||||| ||||||||| Sbjct: 1042 atggtcaatctgcacagcaccaaggttactccgagcagatgaaatctgctgctggagctt 983 Query: 455 atcttgctcctccaagtaggactgccggaacgttttcgggtccctgtcgaaccgagccct 514 ||||| |||||||||||||||| ||||||| || || ||||||||||||||||| || Sbjct: 982 gtcttgttcctccaagtaggactcacggaacgcctttggatccctgtcgaaccgagctct 923 Query: 515 ctcctccacaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcat 574 ||| || ||||| |||||||| || || || |||||||| || ||||||||||||||||| Sbjct: 922 ctcttcaacaattttcaccctgagttcagcatccctgacagtaccaacctgcgcgtgcat 863 Query: 575 cccgaaccggtccagcagctgcggccggagctc 607 || |||||||| |||||||| ||||||||||| Sbjct: 862 gccaaaccggtcaagcagctgtggccggagctc 830
>gb|AY109514.1| Zea mays CL865_1 mRNA sequence Length = 1376 Score = 258 bits (130), Expect = 2e-65 Identities = 245/282 (86%), Gaps = 1/282 (0%) Strand = Plus / Minus Query: 130 aacatttacctcgagaacaatctagccaaagacttcatagaacttctcaactacaagcaa 189 |||||||||||| ||||||||||||| |||||||||||| |||||||||| ||||| || Sbjct: 1286 aacatttacctcaagaacaatctagctaaagacttcataaaacttctcaatgacaagtaa 1227 Query: 190 gcccgagtcgattgattcgagcgggtctttacggagccgatgcctcaaacagttgggaat 249 |||||||| || ||||| ||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 1226 acccgagtcaatggattcaagcggatccttgcggagccgatgcctcaagcagtttggaat 1167 Query: 250 cacagtggcaatgtcctccactgtcacgacgtcccttcctttcaagggcagccaacgcct 309 ||||| |||||||||||||| || ||| ||||||||||||||| ||||||| ||||| Sbjct: 1166 gacagtagcaatgtcctccacggtgacgctgtcccttcctttcaa-cgcagccagcgcct 1108 Query: 310 tggcagccctgttagtgacaatgtctcctctgagtccatccacattcagctcggaacaca 369 |||||||||||||||| |||||||| |||||||||||||| || |||| ||| || |||| Sbjct: 1107 tggcagccctgttagtcacaatgtcacctctgagtccatcaacgttcaactcagagcaca 1048 Query: 370 cctgggatatcttaacccggagatcatggtcgagctgcacag 411 ||| ||||||||| || ||||| |||||||| | |||||||| Sbjct: 1047 ccttggatatcttgacacggaggtcatggtcaatctgcacag 1006 Score = 190 bits (96), Expect = 4e-45 Identities = 120/128 (93%) Strand = Plus / Minus Query: 480 cggaacgttttcgggtccctgtcgaaccgagccctctcctccacaatcttcaccctcagc 539 |||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 937 cggaacgtcttcggatccctgtcgaaacgagccctctcctccacgatcttcaccctgagc 878 Query: 540 tcggcgtccctgacggtgccaacctgcgcgtgcatcccgaaccggtccagcagctgcggc 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 877 tcggcgtccctgacggtaccaacctgcgcgtgcatcccgaaccggtccagcagctggggc 818 Query: 600 cggagctc 607 | |||||| Sbjct: 817 ctgagctc 810
>dbj|AK066270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062C16, full insert sequence Length = 2780 Score = 123 bits (62), Expect = 7e-25 Identities = 122/142 (85%) Strand = Plus / Minus Query: 466 ccaagtaggactgccggaacgttttcgggtccctgtcgaaccgagccctctcctccacaa 525 |||||||||||| ||||||| || || ||||||||||||||||| ||||| || |||| Sbjct: 970 ccaagtaggactcacggaacgcctttggatccctgtcgaaccgagctctctcttcaacaa 911 Query: 526 tcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcatcccgaaccggt 585 | |||||||| || || || |||||||| || ||||||||||||||||| || ||||||| Sbjct: 910 ttttcaccctgagttcagcatccctgacagtaccaacctgcgcgtgcatgccaaaccggt 851 Query: 586 ccagcagctgcggccggagctc 607 | |||||||| ||||||||||| Sbjct: 850 caagcagctgtggccggagctc 829
>dbj|D45857.1|SOYCHLI Soybean mRNA for Mg chelatase subunit (46 kD), complete cds Length = 1953 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 513 ctctcctccacaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgc 572 |||||||||||||||||||| || ||||| || ||||| || || ||||| || || ||| Sbjct: 1474 ctctcctccacaatcttcactctgagctcagcatccctaacagttccaacttgagcatgc 1415 Query: 573 atcccgaaccggtccagcagctgcggccggagctc 607 || || |||| || |||||||||||||||||||| Sbjct: 1414 attccaaacctatctagcagctgcggccggagctc 1380 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 330 atgtctcctctgagtccatccacattcagctcggaacacacct 372 ||||||||||| | |||||||||||||| ||| | |||||||| Sbjct: 1657 atgtctcctcttaatccatccacattcaactcagcacacacct 1615
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 291 tcaagggcagccaacgccttggcagccctgttagtgacaatgtctcctctgagtccatcc 350 |||| ||| ||||| |||||||| || | |||||||||||||||||| | || || ||| Sbjct: 1580165 tcaaaggccgccaaggccttggccgcgcggttagtgacaatgtctccccgcaggccgtcc 1580224 Query: 351 acattcagctcggaacacacctggga 376 |||| |||||| | |||||| ||||| Sbjct: 1580225 acatccagctcagcacacacttggga 1580250
>gb|DQ468113.1| Arthrospira platensis magnesium chelatas ChlI subunit gene, partial cds Length = 1002 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 290 ttcaagggcagccaacgccttggcagccctgttagtgacaatgtctcctctgagtccatc 349 ||||| |||||| || ||||| || ||||||||||||||||| ||||| | |||||||| Sbjct: 843 ttcaaaggcagctaaagccttcgccgccctgttagtgacaatatctccccgcagtccatc 784 Query: 350 cacat 354 |||| Sbjct: 783 tacat 779
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 575 cccgaaccggtccagcagctgcgg 598 |||||||||||||||||||||||| Sbjct: 3153766 cccgaaccggtccagcagctgcgg 3153789
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 575 cccgaaccggtccagcagctgcgg 598 |||||||||||||||||||||||| Sbjct: 298570 cccgaaccggtccagcagctgcgg 298593
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 575 cccgaaccggtccagcagctgcgg 598 |||||||||||||||||||||||| Sbjct: 40517 cccgaaccggtccagcagctgcgg 40540
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 306 gccttggcagccctgttagtgacaatgtctcc 337 ||||||||||||| ||| |||||||||||||| Sbjct: 122738 gccttggcagcccggttggtgacaatgtctcc 122707
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 575 cccgaaccggtccagcagctgcgg 598 |||||||||||||||||||||||| Sbjct: 3252694 cccgaaccggtccagcagctgcgg 3252717
>gb|AC104833.6| Mus Musculus Strain C57BL6/J Chromosome 15 BAC, RP23-319B16, Complete Sequence, complete sequence Length = 171061 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 511 ccctctcctccacaatcttcaccctca 537 |||||||||||||||||||| |||||| Sbjct: 70602 ccctctcctccacaatcttccccctca 70576 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 513 ctctcctccacaatcttcaccctca 537 |||||||||||||||||| |||||| Sbjct: 70726 ctctcctccacaatcttccccctca 70702
>gb|AF343974.1|AF343974 Chlamydomonas reinhardtii magnesium-chelatase subunit I (chlI) mRNA, complete cds Length = 2139 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 545 gtccctgacggtgccaacctgcgcgtgcatcccgaaccggtccagcagctg 595 |||| |||||||||| | ||| |||||||| ||||| || ||||||||||| Sbjct: 876 gtccttgacggtgccgatctgggcgtgcatgccgaagcgatccagcagctg 826
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 189 agcccgagtcgattgattcgagcgggtcttt 219 ||||||||||||| ||||||||||| ||||| Sbjct: 1824801 agcccgagtcgatcgattcgagcggatcttt 1824771
>ref|NM_123961.2| Arabidopsis thaliana CHLI2; magnesium chelatase AT5G45930 (CHLI2) mRNA, complete cds Length = 1460 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Minus Query: 522 acaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcatcccgaac 581 |||||||| || |||||||||||||| || || || || || ||||||||||| || ||| Sbjct: 975 acaatcttaactctcagctcggcgtctctaaccgtccctacttgcgcgtgcataccaaac 916 Query: 582 cggtccagcagctg 595 | ||| || ||||| Sbjct: 915 ctgtcaagaagctg 902
>ref|NM_123962.2| Arabidopsis thaliana hydrolase AT5G45940 mRNA, complete cds Length = 1342 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Plus Query: 522 acaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcatcccgaac 581 |||||||| || |||||||||||||| || || || || || ||||||||||| || ||| Sbjct: 1199 acaatcttaactctcagctcggcgtctctaaccgtccctacttgcgcgtgcataccaaac 1258 Query: 582 cggtccagcagctg 595 | ||| || ||||| Sbjct: 1259 ctgtcaagaagctg 1272
>gb|BT015783.1| Arabidopsis thaliana At5g45930 mRNA, complete cds Length = 1257 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Minus Query: 522 acaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcatcccgaac 581 |||||||| || |||||||||||||| || || || || || ||||||||||| || ||| Sbjct: 887 acaatcttaactctcagctcggcgtctctaaccgtccctacttgcgcgtgcataccaaac 828 Query: 582 cggtccagcagctg 595 | ||| || ||||| Sbjct: 827 ctgtcaagaagctg 814
>gb|AY140022.1| Arabidopsis thaliana magnesium chelatase subunit of protochlorophyllide reductase (At5g45930) mRNA, complete cds Length = 1424 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Minus Query: 522 acaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcatcccgaac 581 |||||||| || |||||||||||||| || || || || || ||||||||||| || ||| Sbjct: 975 acaatcttaactctcagctcggcgtctctaaccgtccctacttgcgcgtgcataccaaac 916 Query: 582 cggtccagcagctg 595 | ||| || ||||| Sbjct: 915 ctgtcaagaagctg 902
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 575 cccgaaccggtccagcagctgcggccggagctcg 608 |||||||||||| ||||||||||| || |||||| Sbjct: 2681092 cccgaaccggtcgagcagctgcggacgcagctcg 2681125
>emb|BX831184.1|CNS09ZFF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS66ZF02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1367 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Minus Query: 522 acaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcatcccgaac 581 |||||||| || |||||||||||||| || || || || || ||||||||||| || ||| Sbjct: 960 acaatcttaactctcagctcggcgtctctaaccgtccctacttgcgcgtgcataccaaac 901 Query: 582 cggtccagcagctg 595 | ||| || ||||| Sbjct: 900 ctgtcaagaagctg 887
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 575 cccgaaccggtccagcagctgcggccggagctcg 608 |||||||||||| |||| ||||||||| |||||| Sbjct: 7690192 cccgaaccggtcgagcaactgcggccgcagctcg 7690225
>dbj|AB016870.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15I22 Length = 59648 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Minus Query: 522 acaatcttcaccctcagctcggcgtccctgacggtgccaacctgcgcgtgcatcccgaac 581 |||||||| || |||||||||||||| || || || || || ||||||||||| || ||| Sbjct: 46519 acaatcttaactctcagctcggcgtctctaaccgtccctacttgcgcgtgcataccaaac 46460 Query: 582 cggtccagcagctg 595 | ||| || ||||| Sbjct: 46459 ctgtcaagaagctg 46446
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 576 ccgaaccggtccagcagctgcggccggagctcg 608 |||||||||||||| |||||||| || |||||| Sbjct: 1998079 ccgaaccggtccagaagctgcgggcgcagctcg 1998047
>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence Length = 203478 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 cagttgggaatcacagtggca 259 ||||||||||||||||||||| Sbjct: 172042 cagttgggaatcacagtggca 172022
>emb|BX927153.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 6/10 Length = 349584 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 576 ccgaaccggtccagcagctgcggccggagctcg 608 ||||| ||||||||||||||||| || |||||| Sbjct: 334371 ccgaaacggtccagcagctgcgggcgcagctcg 334403
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 576 ccgaaccggtccagcagctgcggccggagctcg 608 ||||||||||| |||| ||||||||| |||||| Sbjct: 163640 ccgaaccggtcgagcaactgcggccgcagctcg 163608
>emb|AJ010302.1|RSP010302 Rhodobacter sphaeroides photosynthetic gene cluster Length = 40707 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 576 ccgaaccggtccagcagctgcggccggagctcg 608 |||||||||||||| |||||||| || |||||| Sbjct: 23070 ccgaaccggtccagaagctgcgggcgcagctcg 23102
>gb|AF195122.1| Rhodobacter sphaeroides photosynthetic gene cluster, partial sequence Length = 66280 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 576 ccgaaccggtccagcagctgcggccggagctcg 608 |||||||||||||| |||||||| || |||||| Sbjct: 48176 ccgaaccggtccagaagctgcgggcgcagctcg 48208
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 tgatctgctcctggagcttat 456 ||||||||||||||||||||| Sbjct: 382569 tgatctgctcctggagcttat 382589
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 576 ccgaaccggtccagcagctgcggccggagctcg 608 ||||| ||||||||||||||||| || |||||| Sbjct: 2109762 ccgaaacggtccagcagctgcgggcgcagctcg 2109794
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 576 ccgaaccggtccagcagctgcggccggagctcg 608 ||||| ||||||||||||||||| || |||||| Sbjct: 4235270 ccgaaacggtccagcagctgcggacgcagctcg 4235302
>ref|NM_209271.1| Eremothecium gossypii ADL178Wp (ADL178W), mRNA Length = 789 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 tgatctgctcctggagcttat 456 ||||||||||||||||||||| Sbjct: 24 tgatctgctcctggagcttat 44
>gb|AF017642.1|AF017642 Rhodobacter sphaeroides magnesium chelatase subunits BchI (bchI) and BchD (bchD) genes, complete cds; and BchO (bchO) gene, partial cds Length = 3154 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 576 ccgaaccggtccagcagctgcggccggagctcg 608 |||||||||||||| |||||||| || |||||| Sbjct: 581 ccgaaccggtccagaagctgcgggcgcagctcg 549
>ref|NM_201215.1| Danio rerio zgc:56248 (zgc:56248), mRNA Length = 2022 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 cctccacaatcttcaccctc 536 |||||||||||||||||||| Sbjct: 222 cctccacaatcttcaccctc 203
>ref|NM_025807.1| Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 9 (Slc16a9), mRNA Length = 3565 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 cagcagctgcggccggagct 606 |||||||||||||||||||| Sbjct: 52 cagcagctgcggccggagct 71
>gb|BC034205.1| Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 9, mRNA (cDNA clone IMAGE:4987055), containing frame-shift errors Length = 2750 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 cagcagctgcggccggagct 606 |||||||||||||||||||| Sbjct: 6 cagcagctgcggccggagct 25
>gb|AC163207.6| Mus musculus chromosome 1, clone RP24-137J11, complete sequence Length = 169102 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gttactataaaagtttacag 91 |||||||||||||||||||| Sbjct: 44071 gttactataaaagtttacag 44090
>gb|AC164303.2| Mus musculus BAC clone RP24-530J21 from chromosome 14, complete sequence Length = 164905 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 ctcctccacaatcttcaccc 534 |||||||||||||||||||| Sbjct: 96301 ctcctccacaatcttcaccc 96320
>gb|AC101831.7| Mus musculus chromosome 15, clone RP24-491D12, complete sequence Length = 129818 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aaaggttactataaaagttt 87 |||||||||||||||||||| Sbjct: 92402 aaaggttactataaaagttt 92421
>gb|BC055839.1| Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 9, mRNA (cDNA clone MGC:67847 IMAGE:4237811), complete cds Length = 2568 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 cagcagctgcggccggagct 606 |||||||||||||||||||| Sbjct: 9 cagcagctgcggccggagct 28
>gb|BC046023.1| Danio rerio zgc:56248, mRNA (cDNA clone MGC:56248 IMAGE:5601671), complete cds Length = 2022 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 cctccacaatcttcaccctc 536 |||||||||||||||||||| Sbjct: 222 cctccacaatcttcaccctc 203
>gb|BT012789.1| Lycopersicon esculentum clone 113783F, mRNA sequence Length = 1564 Score = 40.1 bits (20), Expect = 8.3 Identities = 65/80 (81%) Strand = Plus / Minus Query: 318 ctgttagtgacaatgtctcctctgagtccatccacattcagctcggaacacacctgggat 377 ||||||||||| || || ||||| | |||||| |||||||| || | ||| |||| || Sbjct: 1160 ctgttagtgactatatcacctctcaatccatcgacattcagttctgcacagaccttagag 1101 Query: 378 atcttaacccggagatcatg 397 || ||||| ||||||||||| Sbjct: 1100 attttaacgcggagatcatg 1081
>gb|AC121858.3| Mus musculus BAC clone RP24-104B23 from chromosome 8, complete sequence Length = 177226 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 cacattcagctcggaacaca 369 |||||||||||||||||||| Sbjct: 62590 cacattcagctcggaacaca 62609
>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence Length = 242112 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 cagcagctgcggccggagct 606 |||||||||||||||||||| Sbjct: 139389 cagcagctgcggccggagct 139370
>emb|CR391986.5| Zebrafish DNA sequence from clone CH211-195O20 in linkage group 17, complete sequence Length = 131805 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 cctccacaatcttcaccctc 536 |||||||||||||||||||| Sbjct: 78258 cctccacaatcttcaccctc 78239
>emb|AL359173.15| Human DNA sequence from clone RP11-769K12 on chromosome 6 Contains STSs and GSSs, complete sequence Length = 167904 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cttctcaactacaagcaagc 191 |||||||||||||||||||| Sbjct: 144462 cttctcaactacaagcaagc 144443
>gb|AC118290.7| Rattus norvegicus 2 BAC CH230-366D18 (Children's Hospital Oakland Research Institute) complete sequence Length = 210896 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ttctatacaatgaagaatat 44 |||||||||||||||||||| Sbjct: 1765 ttctatacaatgaagaatat 1784
>gb|AC122587.5| Rattus norvegicus BAC CH230-173H6 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 202972 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ttctatacaatgaagaatat 44 |||||||||||||||||||| Sbjct: 164155 ttctatacaatgaagaatat 164174
>gb|AC159979.5| Mus musculus chromosome 15, clone RP24-262D18, complete sequence Length = 166004 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 aaaggttactataaaagttt 87 |||||||||||||||||||| Sbjct: 159830 aaaggttactataaaagttt 159811
>dbj|AK004684.2| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200010B04 product:hypothetical protein, full insert sequence Length = 2653 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 cagcagctgcggccggagct 606 |||||||||||||||||||| Sbjct: 109 cagcagctgcggccggagct 128
>dbj|AK004599.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200004H04 product:hypothetical protein, full insert sequence Length = 2927 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 cagcagctgcggccggagct 606 |||||||||||||||||||| Sbjct: 230 cagcagctgcggccggagct 249
>dbj|AK004556.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200003C15 product:hypothetical protein, full insert sequence Length = 3565 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 cagcagctgcggccggagct 606 |||||||||||||||||||| Sbjct: 52 cagcagctgcggccggagct 71
>gb|AC105922.5| Homo sapiens BAC clone RP11-548K13 from 2, complete sequence Length = 115915 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ttttctatacaatgaagaat 42 |||||||||||||||||||| Sbjct: 83048 ttttctatacaatgaagaat 83067
>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome Length = 164921 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 314 agccctgttagtgacaatgtctcctctgagtccatc 349 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 109936 agccctgttggtgactatatctcctctgagaccatc 109971
>emb|BX005392.12| Zebrafish DNA sequence from clone DKEY-117J14 in linkage group 24, complete sequence Length = 178765 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tatacaatgaagaatatagt 47 |||||||||||||||||||| Sbjct: 69925 tatacaatgaagaatatagt 69906
>gb|AC132613.4| Mus musculus BAC clone RP23-285C21 from 6, complete sequence Length = 221317 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 acaatctagccaaagacttc 165 |||||||||||||||||||| Sbjct: 131959 acaatctagccaaagacttc 131940
>emb|AL590988.11| Mouse DNA sequence from clone RP23-46C18 on chromosome 8, complete sequence Length = 183975 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 cacattcagctcggaacaca 369 |||||||||||||||||||| Sbjct: 172006 cacattcagctcggaacaca 172025
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaatgtcctccactgtcac 276 |||||||||||||||||||| Sbjct: 2797845 gcaatgtcctccactgtcac 2797826
>emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chromosome X, complete sequence Length = 175057 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 ctccacaatcttcaccctcagctc 541 ||||||| |||||||||||||||| Sbjct: 16678 ctccacactcttcaccctcagctc 16655 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,544,519 Number of Sequences: 3902068 Number of extensions: 4544519 Number of successful extensions: 79866 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79345 Number of HSP's gapped (non-prelim): 513 length of query: 608 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 585 effective length of database: 17,143,297,704 effective search space: 10028829156840 effective search space used: 10028829156840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)