Clone Name	rbags39h09
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_472639.1| Oryza sativa (japonica cultivar-group), predic...	157	2e-35
2	emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4,...	157	2e-35
3	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	157	2e-35
4	dbj|AK064788.1| Oryza sativa (japonica cultivar-group) cDNA clon...	157	2e-35
5	dbj|AK061617.1| Oryza sativa (japonica cultivar-group) cDNA clon...	157	2e-35
6	gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone ...	157	2e-35
7	emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4,...	157	2e-35
8	ref|XM_463019.1| Oryza sativa (japonica cultivar-group), OSJNBa0...	145	8e-32
9	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	145	8e-32
10	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	145	8e-32
11	gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome...	145	8e-32
12	gb|AY104783.1| Zea mays PCO142662 mRNA sequence	137	2e-29
13	dbj|AB070260.1| Oryza sativa (japonica cultivar-group) OsRPN6 mR...	125	8e-26
14	ref|NM_102656.2| Arabidopsis thaliana ATS9 (19S PROTEOSOME SUBUN...	74	3e-10
15	gb|AY230837.1| Arabidopsis thaliana 26S proteasome subunit RPN6a...	74	3e-10
16	gb|AY230836.1| Arabidopsis thaliana 26S proteasome subunit RPN6a...	74	3e-10
17	gb|AY230835.1| Arabidopsis thaliana 26S proteasome subunit RPN6a...	74	3e-10
18	gb|AY230834.1| Arabidopsis thaliana 26S proteasome subunit RPN6a...	74	3e-10
19	gb|AY056311.1| Arabidopsis thaliana putative 19S proteosome subu...	74	3e-10
20	gb|AF370203.1| Arabidopsis thaliana putative 19S proteosome subu...	74	3e-10
21	emb|BX815665.1|CNS0ABJI Arabidopsis thaliana Full-length cDNA Co...	74	3e-10
22	gb|AY089157.1| Arabidopsis thaliana clone 39755 mRNA, complete s...	74	3e-10
23	gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28...	74	3e-10
24	gb|AF083890.1|AF083890 Arabidopsis thaliana 19S proteosome subun...	74	3e-10
25	emb|BX012998.1|CNS08I6Y Single read from an extremity of a full-...	62	1e-06
26	ref|XM_321691.2| Anopheles gambiae str. PEST ENSANGP00000015227 ...	62	1e-06
27	gb|AY440999.1| Armigeres subalbatus ASAP ID: 40603 19S proteasom...	54	2e-04
28	ref|NM_166065.1| Drosophila melanogaster Proteasome p44.5 subuni...	44	0.22
29	ref|NM_058126.3| Drosophila melanogaster Proteasome p44.5 subuni...	44	0.22
30	gb|AC007580.6| Drosophila melanogaster, chromosome 2R, region 50...	44	0.22
31	gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome 2R, r...	44	0.22
32	gb|AF145309.1|AF145309 Drosophila melanogaster 26S proteasome re...	44	0.22
33	gb|AF160939.1|AF160939 Drosophila melanogaster clone LD18931 BcD...	44	0.22
34	gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37...	44	0.22
35	emb|AL117338.15|HSA490O24 Human DNA sequence from clone RP11-490...	42	0.89
36	dbj|AB225611.1| Aspergillus oryzae cDNA, contig sequence: AoEST2466	42	0.89
37	dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001	42	0.89
38	ref|XM_951414.1| Neurospora crassa OR74A hypothetical protein ( ...	40	3.5
39	ref|XM_328034.1| Neurospora crassa OR74A hypothetical protein ( ...	40	3.5
40	ref|XM_380482.1| Gibberella zeae PH-1 chromosome 1 conserved hyp...	40	3.5
41	emb|AL355930.2|NCB2O8 Neurospora crassa DNA linkage group II BAC...	40	3.5

---

>ref|XM_472639.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1278

 Score =  157 bits (79), Expect = 2e-35
 Identities = 203/246 (82%), Gaps = 1/246 (0%)
 Strand = Plus / Minus

                                                                        
Query: 25   aagccatgatcttggccgacgctcatgtaaaggctctcgacaaccttncctacattcgaa 84
            |||||||||||||||| ||| ||||||||||| || ||||| ||||| || ||||| |||
Sbjct: 1276 aagccatgatcttggcagac-ctcatgtaaagactgtcgacgaccttcccaacatttgaa 1218

                                                                        
Query: 85   attgttnccagcntagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgagg 144
            || ||| | ||  ||||||||||||| ||||| |||||||  || || || || ||||||
Sbjct: 1217 atagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgagg 1158

                                                                        
Query: 145  cagcccgcgccctgatccanagtccctgccaatttcttgtccaggatcatctgngacagc 204
            ||||| || || ||||||| ||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 1157 cagccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagc 1098

                                                                        
Query: 205  ttcttctncacatgctcgattgncaactcgatcatctctgntacgtgtgcaatctncacc 264
            |||||||  ||||| || | || |||||| |||||||| |  |  |||||||||| ||||
Sbjct: 1097 ttcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccacc 1038

                  
Query: 265  cttgag 270
            ||||||
Sbjct: 1037 cttgag 1032

---

>emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058G03,
             complete sequence
          Length = 46422

 Score =  157 bits (79), Expect = 2e-35
 Identities = 203/246 (82%), Gaps = 1/246 (0%)
 Strand = Plus / Minus

                                                                         
Query: 25    aagccatgatcttggccgacgctcatgtaaaggctctcgacaaccttncctacattcgaa 84
             |||||||||||||||| ||| ||||||||||| || ||||| ||||| || ||||| |||
Sbjct: 44867 aagccatgatcttggcagac-ctcatgtaaagactgtcgacgaccttcccaacatttgaa 44809

                                                                         
Query: 85    attgttnccagcntagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgagg 144
             || ||| | ||  ||||||||||||| ||||| |||||||  || || || || ||||||
Sbjct: 44808 atagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgagg 44749

                                                                         
Query: 145   cagcccgcgccctgatccanagtccctgccaatttcttgtccaggatcatctgngacagc 204
             ||||| || || ||||||| ||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 44748 cagccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagc 44689

                                                                         
Query: 205   ttcttctncacatgctcgattgncaactcgatcatctctgntacgtgtgcaatctncacc 264
             |||||||  ||||| || | || |||||| |||||||| |  |  |||||||||| ||||
Sbjct: 44688 ttcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccacc 44629

                   
Query: 265   cttgag 270
             ||||||
Sbjct: 44628 cttgag 44623

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  157 bits (79), Expect = 2e-35
 Identities = 203/246 (82%), Gaps = 1/246 (0%)
 Strand = Plus / Minus

                                                                            
Query: 25       aagccatgatcttggccgacgctcatgtaaaggctctcgacaaccttncctacattcgaa 84
                |||||||||||||||| ||| ||||||||||| || ||||| ||||| || ||||| |||
Sbjct: 22146386 aagccatgatcttggcagac-ctcatgtaaagactgtcgacgaccttcccaacatttgaa 22146328

                                                                            
Query: 85       attgttnccagcntagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgagg 144
                || ||| | ||  ||||||||||||| ||||| |||||||  || || || || ||||||
Sbjct: 22146327 atagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgagg 22146268

                                                                            
Query: 145      cagcccgcgccctgatccanagtccctgccaatttcttgtccaggatcatctgngacagc 204
                ||||| || || ||||||| ||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 22146267 cagccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagc 22146208

                                                                            
Query: 205      ttcttctncacatgctcgattgncaactcgatcatctctgntacgtgtgcaatctncacc 264
                |||||||  ||||| || | || |||||| |||||||| |  |  |||||||||| ||||
Sbjct: 22146207 ttcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccacc 22146148

                      
Query: 265      cttgag 270
                ||||||
Sbjct: 22146147 cttgag 22146142

---

>dbj|AK064788.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B21, full
            insert sequence
          Length = 1524

 Score =  157 bits (79), Expect = 2e-35
 Identities = 203/246 (82%), Gaps = 1/246 (0%)
 Strand = Plus / Minus

                                                                        
Query: 25   aagccatgatcttggccgacgctcatgtaaaggctctcgacaaccttncctacattcgaa 84
            |||||||||||||||| ||| ||||||||||| || ||||| ||||| || ||||| |||
Sbjct: 1407 aagccatgatcttggcagac-ctcatgtaaagactgtcgacgaccttcccaacatttgaa 1349

                                                                        
Query: 85   attgttnccagcntagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgagg 144
            || ||| | ||  ||||||||||||| ||||| |||||||  || || || || ||||||
Sbjct: 1348 atagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgagg 1289

                                                                        
Query: 145  cagcccgcgccctgatccanagtccctgccaatttcttgtccaggatcatctgngacagc 204
            ||||| || || ||||||| ||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 1288 cagccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagc 1229

                                                                        
Query: 205  ttcttctncacatgctcgattgncaactcgatcatctctgntacgtgtgcaatctncacc 264
            |||||||  ||||| || | || |||||| |||||||| |  |  |||||||||| ||||
Sbjct: 1228 ttcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccacc 1169

                  
Query: 265  cttgag 270
            ||||||
Sbjct: 1168 cttgag 1163

---

>dbj|AK061617.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-C10, full
           insert sequence
          Length = 540

 Score =  157 bits (79), Expect = 2e-35
 Identities = 203/246 (82%), Gaps = 1/246 (0%)
 Strand = Plus / Minus

                                                                       
Query: 25  aagccatgatcttggccgacgctcatgtaaaggctctcgacaaccttncctacattcgaa 84
           |||||||||||||||| ||| ||||||||||| || ||||| ||||| || ||||| |||
Sbjct: 423 aagccatgatcttggcagac-ctcatgtaaagactgtcgacgaccttcccaacatttgaa 365

                                                                       
Query: 85  attgttnccagcntagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgagg 144
           || ||| | ||  ||||||||||||| ||||| |||||||  || || || || ||||||
Sbjct: 364 atagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgagg 305

                                                                       
Query: 145 cagcccgcgccctgatccanagtccctgccaatttcttgtccaggatcatctgngacagc 204
           ||||| || || ||||||| ||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 304 cagccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagc 245

                                                                       
Query: 205 ttcttctncacatgctcgattgncaactcgatcatctctgntacgtgtgcaatctncacc 264
           |||||||  ||||| || | || |||||| |||||||| |  |  |||||||||| ||||
Sbjct: 244 ttcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccacc 185

                 
Query: 265 cttgag 270
           ||||||
Sbjct: 184 cttgag 179

---

>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from
             chromosome 4, complete sequence
          Length = 90825

 Score =  157 bits (79), Expect = 2e-35
 Identities = 203/246 (82%), Gaps = 1/246 (0%)
 Strand = Plus / Minus

                                                                         
Query: 25    aagccatgatcttggccgacgctcatgtaaaggctctcgacaaccttncctacattcgaa 84
             |||||||||||||||| ||| ||||||||||| || ||||| ||||| || ||||| |||
Sbjct: 70892 aagccatgatcttggcagac-ctcatgtaaagactgtcgacgaccttcccaacatttgaa 70834

                                                                         
Query: 85    attgttnccagcntagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgagg 144
             || ||| | ||  ||||||||||||| ||||| |||||||  || || || || ||||||
Sbjct: 70833 atagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgagg 70774

                                                                         
Query: 145   cagcccgcgccctgatccanagtccctgccaatttcttgtccaggatcatctgngacagc 204
             ||||| || || ||||||| ||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 70773 cagccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagc 70714

                                                                         
Query: 205   ttcttctncacatgctcgattgncaactcgatcatctctgntacgtgtgcaatctncacc 264
             |||||||  ||||| || | || |||||| |||||||| |  |  |||||||||| ||||
Sbjct: 70713 ttcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccacc 70654

                   
Query: 265   cttgag 270
             ||||||
Sbjct: 70653 cttgag 70648

---

>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08,
             complete sequence
          Length = 118959

 Score =  157 bits (79), Expect = 2e-35
 Identities = 203/246 (82%), Gaps = 1/246 (0%)
 Strand = Plus / Minus

                                                                         
Query: 25    aagccatgatcttggccgacgctcatgtaaaggctctcgacaaccttncctacattcgaa 84
             |||||||||||||||| ||| ||||||||||| || ||||| ||||| || ||||| |||
Sbjct: 16247 aagccatgatcttggcagac-ctcatgtaaagactgtcgacgaccttcccaacatttgaa 16189

                                                                         
Query: 85    attgttnccagcntagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgagg 144
             || ||| | ||  ||||||||||||| ||||| |||||||  || || || || ||||||
Sbjct: 16188 atagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgagg 16129

                                                                         
Query: 145   cagcccgcgccctgatccanagtccctgccaatttcttgtccaggatcatctgngacagc 204
             ||||| || || ||||||| ||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 16128 cagccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagc 16069

                                                                         
Query: 205   ttcttctncacatgctcgattgncaactcgatcatctctgntacgtgtgcaatctncacc 264
             |||||||  ||||| || | || |||||| |||||||| |  |  |||||||||| ||||
Sbjct: 16068 ttcttctcaacatgatcaactggcaactcaatcatctccgcaatatgtgcaatctccacc 16009

                   
Query: 265   cttgag 270
             ||||||
Sbjct: 16008 cttgag 16003

---

>ref|XM_463019.1| Oryza sativa (japonica cultivar-group), OSJNBa0008D12.8 mRNA
          Length = 1846

 Score =  145 bits (73), Expect = 8e-32
 Identities = 200/244 (81%), Gaps = 1/244 (0%)
 Strand = Plus / Minus

                                                                        
Query: 25   aagccatgatcttggccgacgctcatgtaaaggctctcgacaaccttncctacattcgaa 84
            |||||||||||||||| ||| ||||||||||| || || || ||||| || |||||||||
Sbjct: 1563 aagccatgatcttggcagac-ctcatgtaaagactgtcaacgaccttcccaacattcgaa 1505

                                                                        
Query: 85   attgttnccagcntagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgagg 144
            || ||| | ||  ||||||||||||| ||||| |||||||  || || || || ||||||
Sbjct: 1504 atagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgagg 1445

                                                                        
Query: 145  cagcccgcgccctgatccanagtccctgccaatttcttgtccaggatcatctgngacagc 204
            ||||| || || ||||| | ||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 1444 cagccagcaccttgatcgagagttcctgcaaacttcttgtcaaggatcatctgcgacagc 1385

                                                                        
Query: 205  ttcttctncacatgctcgattgncaactcgatcatctctgntacgtgtgcaatctncacc 264
            |||||||  ||||| || | || |||||| |||||||| |  |  |||||||||| ||||
Sbjct: 1384 ttcttctcaacatgatcaactggcaactcaatcatctccgcgatatgtgcaatctccacc 1325

                
Query: 265  cttg 268
            ||||
Sbjct: 1324 cttg 1321

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  145 bits (73), Expect = 8e-32
 Identities = 200/244 (81%), Gaps = 1/244 (0%)
 Strand = Plus / Minus

                                                                            
Query: 25       aagccatgatcttggccgacgctcatgtaaaggctctcgacaaccttncctacattcgaa 84
                |||||||||||||||| ||| ||||||||||| || || || ||||| || |||||||||
Sbjct: 20887970 aagccatgatcttggcagac-ctcatgtaaagactgtcaacgaccttcccaacattcgaa 20887912

                                                                            
Query: 85       attgttnccagcntagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgagg 144
                || ||| | ||  ||||||||||||| ||||| |||||||  || || || || ||||||
Sbjct: 20887911 atagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgagg 20887852

                                                                            
Query: 145      cagcccgcgccctgatccanagtccctgccaatttcttgtccaggatcatctgngacagc 204
                ||||| || || ||||| | ||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 20887851 cagccagcaccttgatcgagagttcctgcaaacttcttgtcaaggatcatctgcgacagc 20887792

                                                                            
Query: 205      ttcttctncacatgctcgattgncaactcgatcatctctgntacgtgtgcaatctncacc 264
                |||||||  ||||| || | || |||||| |||||||| |  |  |||||||||| ||||
Sbjct: 20887791 ttcttctcaacatgatcaactggcaactcaatcatctccgcgatatgtgcaatctccacc 20887732

                    
Query: 265      cttg 268
                ||||
Sbjct: 20887731 cttg 20887728

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  145 bits (73), Expect = 8e-32
 Identities = 200/244 (81%), Gaps = 1/244 (0%)
 Strand = Plus / Minus

                                                                            
Query: 25       aagccatgatcttggccgacgctcatgtaaaggctctcgacaaccttncctacattcgaa 84
                |||||||||||||||| ||| ||||||||||| || || || ||||| || |||||||||
Sbjct: 20880999 aagccatgatcttggcagac-ctcatgtaaagactgtcaacgaccttcccaacattcgaa 20880941

                                                                            
Query: 85       attgttnccagcntagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgagg 144
                || ||| | ||  ||||||||||||| ||||| |||||||  || || || || ||||||
Sbjct: 20880940 atagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgagg 20880881

                                                                            
Query: 145      cagcccgcgccctgatccanagtccctgccaatttcttgtccaggatcatctgngacagc 204
                ||||| || || ||||| | ||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 20880880 cagccagcaccttgatcgagagttcctgcaaacttcttgtcaaggatcatctgcgacagc 20880821

                                                                            
Query: 205      ttcttctncacatgctcgattgncaactcgatcatctctgntacgtgtgcaatctncacc 264
                |||||||  ||||| || | || |||||| |||||||| |  |  |||||||||| ||||
Sbjct: 20880820 ttcttctcaacatgatcaactggcaactcaatcatctccgcgatatgtgcaatctccacc 20880761

                    
Query: 265      cttg 268
                ||||
Sbjct: 20880760 cttg 20880757

---

>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12
             map MAP_LOC, complete sequence
          Length = 167323

 Score =  145 bits (73), Expect = 8e-32
 Identities = 200/244 (81%), Gaps = 1/244 (0%)
 Strand = Plus / Plus

                                                                         
Query: 25    aagccatgatcttggccgacgctcatgtaaaggctctcgacaaccttncctacattcgaa 84
             |||||||||||||||| ||| ||||||||||| || || || ||||| || |||||||||
Sbjct: 34542 aagccatgatcttggcagac-ctcatgtaaagactgtcaacgaccttcccaacattcgaa 34600

                                                                         
Query: 85    attgttnccagcntagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgagg 144
             || ||| | ||  ||||||||||||| ||||| |||||||  || || || || ||||||
Sbjct: 34601 atagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgagg 34660

                                                                         
Query: 145   cagcccgcgccctgatccanagtccctgccaatttcttgtccaggatcatctgngacagc 204
             ||||| || || ||||| | ||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 34661 cagccagcaccttgatcgagagttcctgcaaacttcttgtcaaggatcatctgcgacagc 34720

                                                                         
Query: 205   ttcttctncacatgctcgattgncaactcgatcatctctgntacgtgtgcaatctncacc 264
             |||||||  ||||| || | || |||||| |||||||| |  |  |||||||||| ||||
Sbjct: 34721 ttcttctcaacatgatcaactggcaactcaatcatctccgcgatatgtgcaatctccacc 34780

                 
Query: 265   cttg 268
             ||||
Sbjct: 34781 cttg 34784

---

>gb|AY104783.1| Zea mays PCO142662 mRNA sequence
          Length = 1868

 Score =  137 bits (69), Expect = 2e-29
 Identities = 202/248 (81%), Gaps = 1/248 (0%)
 Strand = Plus / Minus

                                                                        
Query: 23   tcaagccatgatcttggccgacgctcatgtaaaggctctcgacaaccttncctacattcg 82
            |||||||||||||||||||||| ||||  |||||||| || |||||||| || |||||||
Sbjct: 1624 tcaagccatgatcttggccgac-ctcacataaaggctgtccacaaccttcccgacattcg 1566

                                                                        
Query: 83   aaattgttnccagcntagcagggaagatcgcctccgtcttggcgtcttcgaatatgatga 142
            |||| ||| | ||  | |||||||||||  |||| ||||| |  || || || || ||||
Sbjct: 1565 aaatggtttcgagagtggcagggaagatttcctcggtcttagaatcctcaaagataatga 1506

                                                                        
Query: 143  ggcagcccgcgccctgatccanagtccctgccaatttcttgtccaggatcatctgngaca 202
            ||||||| || || ||||| |  ||||| || ||||||||||| ||||||||||| ||||
Sbjct: 1505 ggcagccagcaccttgatctagtgtcccagcaaatttcttgtcaaggatcatctgcgaca 1446

                                                                        
Query: 203  gcttcttctncacatgctcgattgncaactcgatcatctctgntacgtgtgcaatctnca 262
            |||||||||  ||||| || || | ||| || |||||||| | ||  |||||||||| ||
Sbjct: 1445 gcttcttctcaacatggtcaatcggcaattcaatcatctccgctatatgtgcaatctcca 1386

                    
Query: 263  cccttgag 270
            ||||||||
Sbjct: 1385 cccttgag 1378

---

>dbj|AB070260.1| Oryza sativa (japonica cultivar-group) OsRPN6 mRNA for 26S
           proteasome regulatory particle non-ATPase subunit6,
           partial cds
          Length = 385

 Score =  125 bits (63), Expect = 8e-26
 Identities = 152/182 (83%), Gaps = 1/182 (0%)
 Strand = Plus / Minus

                                                                       
Query: 25  aagccatgatcttggccgacgctcatgtaaaggctctcgacaaccttncctacattcgaa 84
           |||||||||||||||| ||| ||||||||||| || ||||| ||||| || ||||| |||
Sbjct: 181 aagccatgatcttggcagac-ctcatgtaaagactgtcgacgaccttcccaacatttgaa 123

                                                                       
Query: 85  attgttnccagcntagcagggaagatcgcctccgtcttggcgtcttcgaatatgatgagg 144
           || ||| | ||  ||||||||||||| ||||| |||||||  || || || || ||||||
Sbjct: 122 atagtttcaagtgtagcagggaagattgcctcggtcttgggatcctcaaagataatgagg 63

                                                                       
Query: 145 cagcccgcgccctgatccanagtccctgccaatttcttgtccaggatcatctgngacagc 204
           ||||| || || ||||||| ||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 62  cagccagcaccttgatccagagttcctgcaaacttcttgtcaaggatcatctgcgacagc 3

             
Query: 205 tt 206
           ||
Sbjct: 2   tt 1

---

>ref|NM_102656.2| Arabidopsis thaliana ATS9 (19S PROTEOSOME SUBUNIT 9) AT1G29150 (ATS9)
            mRNA, complete cds
          Length = 1569

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 126  gtcttcgaatatgatgaggcagcccgcgccctgatccanagtccctgccaatttcttgtc 185
            ||||||||| ||||||||||| || || || |||||||  || ||||| |||||||||||
Sbjct: 1263 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1204

                                                  
Query: 186  caggatcatctgngacagcttcttctncacatgctcga 223
             || |||||||| || |||||||| | |||||| ||||
Sbjct: 1203 gagtatcatctgagatagcttcttttccacatggtcga 1166

---

>gb|AY230837.1| Arabidopsis thaliana 26S proteasome subunit RPN6a (RPN6a) mRNA,
            RPN6a-4 allele, partial cds
          Length = 1333

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 126  gtcttcgaatatgatgaggcagcccgcgccctgatccanagtccctgccaatttcttgtc 185
            ||||||||| ||||||||||| || || || |||||||  || ||||| |||||||||||
Sbjct: 1098 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1039

                                                  
Query: 186  caggatcatctgngacagcttcttctncacatgctcga 223
             || |||||||| || |||||||| | |||||| ||||
Sbjct: 1038 gagtatcatctgagatagcttcttttccacatggtcga 1001

---

>gb|AY230836.1| Arabidopsis thaliana 26S proteasome subunit RPN6a (RPN6a) mRNA,
            RPN6a-3 allele, complete cds
          Length = 1530

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 126  gtcttcgaatatgatgaggcagcccgcgccctgatccanagtccctgccaatttcttgtc 185
            ||||||||| ||||||||||| || || || |||||||  || ||||| |||||||||||
Sbjct: 1255 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1196

                                                  
Query: 186  caggatcatctgngacagcttcttctncacatgctcga 223
             || |||||||| || |||||||| | |||||| ||||
Sbjct: 1195 gagtatcatctgagatagcttcttttccacatggtcga 1158

---

>gb|AY230835.1| Arabidopsis thaliana 26S proteasome subunit RPN6a (RPN6a) mRNA,
            RPN6a-2 allele, complete cds
          Length = 1522

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 126  gtcttcgaatatgatgaggcagcccgcgccctgatccanagtccctgccaatttcttgtc 185
            ||||||||| ||||||||||| || || || |||||||  || ||||| |||||||||||
Sbjct: 1220 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1161

                                                  
Query: 186  caggatcatctgngacagcttcttctncacatgctcga 223
             || |||||||| || |||||||| | |||||| ||||
Sbjct: 1160 gagtatcatctgagatagcttcttttccacatggtcga 1123

---

>gb|AY230834.1| Arabidopsis thaliana 26S proteasome subunit RPN6a (RPN6a) mRNA,
            RPN6a-1 allele, complete cds
          Length = 1502

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 126  gtcttcgaatatgatgaggcagcccgcgccctgatccanagtccctgccaatttcttgtc 185
            ||||||||| ||||||||||| || || || |||||||  || ||||| |||||||||||
Sbjct: 1226 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1167

                                                  
Query: 186  caggatcatctgngacagcttcttctncacatgctcga 223
             || |||||||| || |||||||| | |||||| ||||
Sbjct: 1166 gagtatcatctgagatagcttcttttccacatggtcga 1129

---

>gb|AY056311.1| Arabidopsis thaliana putative 19S proteosome subunit 9 (At1g29150)
            mRNA, complete cds
          Length = 1291

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 126  gtcttcgaatatgatgaggcagcccgcgccctgatccanagtccctgccaatttcttgtc 185
            ||||||||| ||||||||||| || || || |||||||  || ||||| |||||||||||
Sbjct: 1158 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1099

                                                  
Query: 186  caggatcatctgngacagcttcttctncacatgctcga 223
             || |||||||| || |||||||| | |||||| ||||
Sbjct: 1098 gagtatcatctgagatagcttcttttccacatggtcga 1061

---

>gb|AF370203.1| Arabidopsis thaliana putative 19S proteosome subunit 9 (At1g29150)
            mRNA, complete cds
          Length = 1537

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 126  gtcttcgaatatgatgaggcagcccgcgccctgatccanagtccctgccaatttcttgtc 185
            ||||||||| ||||||||||| || || || |||||||  || ||||| |||||||||||
Sbjct: 1261 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1202

                                                  
Query: 186  caggatcatctgngacagcttcttctncacatgctcga 223
             || |||||||| || |||||||| | |||||| ||||
Sbjct: 1201 gagtatcatctgagatagcttcttttccacatggtcga 1164

---

>emb|BX815665.1|CNS0ABJI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS81ZD02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1405

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 126  gtcttcgaatatgatgaggcagcccgcgccctgatccanagtccctgccaatttcttgtc 185
            ||||||||| ||||||||||| || || || |||||||  || ||||| |||||||||||
Sbjct: 1232 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1173

                                                  
Query: 186  caggatcatctgngacagcttcttctncacatgctcga 223
             || |||||||| || |||||||| | |||||| ||||
Sbjct: 1172 gagtatcatctgagatagcttcttttccacatggtcga 1135

---

>gb|AY089157.1| Arabidopsis thaliana clone 39755 mRNA, complete sequence
          Length = 1521

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 126  gtcttcgaatatgatgaggcagcccgcgccctgatccanagtccctgccaatttcttgtc 185
            ||||||||| ||||||||||| || || || |||||||  || ||||| |||||||||||
Sbjct: 1261 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1202

                                                  
Query: 186  caggatcatctgngacagcttcttctncacatgctcga 223
             || |||||||| || |||||||| | |||||| ||||
Sbjct: 1201 gagtatcatctgagatagcttcttttccacatggtcga 1164

---

>gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28N24 genomic sequence, complete
             sequence
          Length = 154716

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                         
Query: 126   gtcttcgaatatgatgaggcagcccgcgccctgatccanagtccctgccaatttcttgtc 185
             ||||||||| ||||||||||| || || || |||||||  || ||||| |||||||||||
Sbjct: 80993 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 81052

                                                   
Query: 186   caggatcatctgngacagcttcttctncacatgctcga 223
              || |||||||| || |||||||| | |||||| ||||
Sbjct: 81053 gagtatcatctgagatagcttcttttccacatggtcga 81090

---

>gb|AF083890.1|AF083890 Arabidopsis thaliana 19S proteosome subunit 9 mRNA, complete cds
          Length = 1527

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 126  gtcttcgaatatgatgaggcagcccgcgccctgatccanagtccctgccaatttcttgtc 185
            ||||||||| ||||||||||| || || || |||||||  || ||||| |||||||||||
Sbjct: 1268 gtcttcgaagatgatgaggcatccagctccttgatccaaggtacctgcaaatttcttgtc 1209

                                                  
Query: 186  caggatcatctgngacagcttcttctncacatgctcga 223
             || |||||||| || |||||||| | |||||| ||||
Sbjct: 1208 gagtatcatctgagatagcttcttttccacatggtcga 1171

---

>emb|BX012998.1|CNS08I6Y Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA2CC11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 285

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 178 ttcttgtccaggatcatctgngacagcttcttct 211
           |||||||||||||||||||| |||||||||||||
Sbjct: 220 ttcttgtccaggatcatctgtgacagcttcttct 253

---

>ref|XM_321691.2| Anopheles gambiae str. PEST ENSANGP00000015227 (ENSANGG00000012738),
            mRNA
          Length = 2136

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 178  ttcttgtccaggatcatctgngacagcttcttct 211
            |||||||||||||||||||| |||||||||||||
Sbjct: 1374 ttcttgtccaggatcatctgtgacagcttcttct 1341

---

>gb|AY440999.1| Armigeres subalbatus ASAP ID: 40603 19S proteasome regulatory
           particle, lid subcomplex p44.5 subunit mRNA sequence
          Length = 726

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 178 ttcttgtccaggatcatctgngacagcttcttct 211
           |||||||||||||||||||| ||||| |||||||
Sbjct: 250 ttcttgtccaggatcatctgcgacagtttcttct 217

---

>ref|NM_166065.1| Drosophila melanogaster Proteasome p44.5 subunit CG10149-RA,
            transcript variant A (Rpn6), mRNA
          Length = 1729

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 181  ttgtccaggatcatctgngacagcttctt 209
            |||||||||||||| || |||||||||||
Sbjct: 1240 ttgtccaggatcatttgggacagcttctt 1212

---

>ref|NM_058126.3| Drosophila melanogaster Proteasome p44.5 subunit CG10149-RB,
            transcript variant B (Rpn6), mRNA
          Length = 1889

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 181  ttgtccaggatcatctgngacagcttctt 209
            |||||||||||||| || |||||||||||
Sbjct: 1400 ttgtccaggatcatttgggacagcttctt 1372

---

>gb|AC007580.6| Drosophila melanogaster, chromosome 2R, region 50F-51C, BAC clone
              BACR07P02, complete sequence
          Length = 160920

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 181    ttgtccaggatcatctgngacagcttctt 209
              |||||||||||||| || |||||||||||
Sbjct: 149576 ttgtccaggatcatttgggacagcttctt 149604

---

>gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome 2R, region 51B-51C, BAC clone
             BACR03K23, complete sequence
          Length = 160346

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 181   ttgtccaggatcatctgngacagcttctt 209
             |||||||||||||| || |||||||||||
Sbjct: 27245 ttgtccaggatcatttgggacagcttctt 27273

---

>gb|AF145309.1|AF145309 Drosophila melanogaster 26S proteasome regulatory complex subunit
            p42B mRNA, complete cds
          Length = 1269

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 181  ttgtccaggatcatctgngacagcttctt 209
            |||||||||||||| || |||||||||||
Sbjct: 1115 ttgtccaggatcatttgggacagcttctt 1087

---

>gb|AF160939.1|AF160939 Drosophila melanogaster clone LD18931 BcDNA.LD18931 (BcDNA.LD18931)
            mRNA, complete cds
          Length = 1816

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 181  ttgtccaggatcatctgngacagcttctt 209
            |||||||||||||| || |||||||||||
Sbjct: 1323 ttgtccaggatcatttgggacagcttctt 1295

---

>gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37 of 73 of the complete
              sequence
          Length = 266851

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 181    ttgtccaggatcatctgngacagcttctt 209
              |||||||||||||| || |||||||||||
Sbjct: 119588 ttgtccaggatcatttgggacagcttctt 119616

---

>emb|AL117338.15|HSA490O24 Human DNA sequence from clone RP11-490O24 on chromosome 10 Contains a 60S
              ribosomal protein L23 (RPL23) pseudogene and a novel gene,
              complete sequence
          Length = 168778

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      ctggagaacaaaacatctcct 23
              |||||||||||||||||||||
Sbjct: 135374 ctggagaacaaaacatctcct 135394

---

>dbj|AB225611.1| Aspergillus oryzae cDNA, contig sequence: AoEST2466
          Length = 1491

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 184  tccaggatcatctgngacagcttc 207
            |||||||||||||| |||||||||
Sbjct: 1256 tccaggatcatctgcgacagcttc 1233

---

>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 184     tccaggatcatctgngacagcttc 207
               |||||||||||||| |||||||||
Sbjct: 1055114 tccaggatcatctgcgacagcttc 1055137

---

>ref|XM_951414.1| Neurospora crassa OR74A hypothetical protein ( probable 26s
            proteasome p44.5 protein [imported] - Neurospora crassa
            OR74A emb|CAD01126.1| (AL355930) pro> (NCU01596.1)
            partial mRNA
          Length = 1275

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 184  tccaggatcatctgngacagctt 206
            |||||||||||||| ||||||||
Sbjct: 1115 tccaggatcatctgcgacagctt 1093

---

>ref|XM_328034.1| Neurospora crassa OR74A hypothetical protein ( probable 26s
            proteasome p44.5 protein [imported] - Neurospora crassa
            OR74A emb|CAD01126.1| (AL355930) probable> (NCU01596.1)
            partial mRNA
          Length = 1275

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 184  tccaggatcatctgngacagctt 206
            |||||||||||||| ||||||||
Sbjct: 1115 tccaggatcatctgcgacagctt 1093

---

>ref|XM_380482.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein
            (FG00306.1) partial mRNA
          Length = 1272

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 180  cttgtccaggatcatctgngacagctt 206
            |||||||||||||||||| || |||||
Sbjct: 1116 cttgtccaggatcatctgggagagctt 1090

---

>emb|AL355930.2|NCB2O8 Neurospora crassa DNA linkage group II BAC clone B2O8
          Length = 162671

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 184   tccaggatcatctgngacagctt 206
             |||||||||||||| ||||||||
Sbjct: 81132 tccaggatcatctgcgacagctt 81154


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,249,529
Number of Sequences: 3902068
Number of extensions: 1249529
Number of successful extensions: 17475
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17396
Number of HSP's gapped (non-prelim): 65
length of query: 270
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 248
effective length of database: 17,147,199,772
effective search space: 4252505543456
effective search space used: 4252505543456
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---