>ODO1_HAEIN (P45303) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)|
           (Alpha-ketoglutarate dehydrogenase)
          Length = 935

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 19/62 (30%), Positives = 36/62 (58%)
 Frame = -1

Query: 519 VLRKQALQMKKRPVLAIGRNNVITGVAKTIRTHFKKHPLAVVNIKNRADGTPVQQLISEL 340
           +LR+Q+L+  +RP++AI   +++            +HPLAV ++    +GT  Q +I E+
Sbjct: 763 MLRRQSLRKMRRPLIAISPKSLL------------RHPLAVSSLDELINGT-FQTVIGEI 809

Query: 339 EE 334
           +E
Sbjct: 810 DE 811

>CINA_STRR6 (Q7ZAK3) Putative competence-damage protein|
          Length = 418

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
 Frame = -1

Query: 489 KRPVLAIGRNNVITGVAKTIRTHFKKHPLAVVNIK---NRADGTPVQQLISELEEATGSV 319
           K  ++A+G   ++TG        F    LA + +      A G    +L+S LE      
Sbjct: 2   KAEIIAVG-TEILTGQIVNTNAQFLSEKLAEIGVDVYFQTAVGDNEVRLLSLLE------ 54

Query: 318 LVSREPNKVILYRGWGADATQTSSREDSTYVGEKEVISPQLLEAIRLECGLHP 160
           + S+  + VIL  G GA     + +  + ++G+  V  PQ  E + +   L P
Sbjct: 55  IASQRSSLVILTGGLGATEDDLTKQTLAKFLGKALVFDPQAQEKLDIFFALRP 107

>STRO_STRGR (P29785) Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)|
           (dTDP-glucose synthase)
          Length = 259

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = -1

Query: 390 IKNRADGTPVQQLISELEEATGSVLVSREPNKVILYRGWGADATQTSSR 244
           +++++DG+PV +    +E+A  +VL +  P   +L    G+  T++S R
Sbjct: 32  VRHKSDGSPVSEADLAVEKALLAVLAAERPGDAVLTEESGSLGTRSSRR 80

>CPSM_HUMAN (P31327) Carbamoyl-phosphate synthase [ammonia], mitochondrial|
           precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase
           I) (CPSase I)
          Length = 1500

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 20/75 (26%), Positives = 34/75 (45%)
 Frame = -1

Query: 567 PRLPSKAAPLSNRERLVLRKQALQMKKRPVLAIGRNNVITGVAKTIRTHFKKHPLAVVNI 388
           P  P+ A PL    R +L       +K P+  I   N+ITG+A   +T+        +++
Sbjct: 265 PGNPALAEPLIQNVRKILESD----RKEPLFGISTGNLITGLAAGAKTY-------KMSM 313

Query: 387 KNRADGTPVQQLISE 343
            NR    PV  + ++
Sbjct: 314 ANRGQNQPVLNITNK 328

>LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A chain)|
          Length = 3084

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 16/65 (24%), Positives = 24/65 (36%)
 Frame = -3

Query: 484 ASTCHWEE*CHHRSCENNTDTLQKASSCCCEY*EQSRWNSSSTADIRTRGGNRIGSCVAR 305
           AS+C W+E      C+   +T  ++   CC    Q  W   + +      GN    C   
Sbjct: 283 ASSCPWDEEAKQLQCQCEHNTCGESCDRCCPGYHQQPWRPGTIS-----SGNECEECNCH 337

Query: 304 TKQSD 290
            K  D
Sbjct: 338 NKAKD 342

>LAMA1_HUMAN (P25391) Laminin alpha-1 chain precursor (Laminin A chain)|
          Length = 3075

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 16/65 (24%), Positives = 26/65 (40%)
 Frame = -3

Query: 484 ASTCHWEE*CHHRSCENNTDTLQKASSCCCEY*EQSRWNSSSTADIRTRGGNRIGSCVAR 305
           AS+C W+E      C+   +T  ++ + CC    Q  W   + +      GN   +C   
Sbjct: 276 ASSCPWDETTKKLQCQCEHNTCGESCNRCCPGYHQQPWRPGTVS-----SGNTCEACNCH 330

Query: 304 TKQSD 290
            K  D
Sbjct: 331 NKAKD 335

>ENO_MESCR (Q43130) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)|
           (2-phospho-D-glycerate hydro-lyase)
          Length = 444

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -1

Query: 390 IKNRADGTPVQQLISELEEATGSVLVSREPNKVILYRGWGADATQTSSREDSTYVGEKEV 211
           +K   D  P   L+ ++ +  GSV  S E  K+    GWG  A+  S   + T++ +  V
Sbjct: 337 VKKAIDENPCNALLLKVNQI-GSVTESIEAVKMSKKAGWGVMASHRSGETEDTFIADLSV 395

>PHC1_MOUSE (Q64028) Polyhomeotic-like protein 1 (mPH1) (Early development|
           regulatory protein 1) (RAE-28)
          Length = 1012

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/71 (22%), Positives = 31/71 (43%)
 Frame = -1

Query: 561 LPSKAAPLSNRERLVLRKQALQMKKRPVLAIGRNNVITGVAKTIRTHFKKHPLAVVNIKN 382
           LP+KA+P +   +++  K +L  K  PV ++  N   + +     T     P   +  + 
Sbjct: 667 LPTKASPAAESPKVIEEKNSLGEKAEPVASLNANPPNSDLVALAPTPSAPPPTLALVSRQ 726

Query: 381 RADGTPVQQLI 349
             D  P Q ++
Sbjct: 727 MGDSKPPQAIV 737

>Y1728_DEIRA (Q9RTN2) UPF0085 protein DR1728|
          Length = 277

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -1

Query: 486 RPVLAIGRNNVITG--VAKTIRTHFKKHPLAVVNIKNRADGTPVQQLISELEEATGS 322
           RPV  +  +  +T   +A+ + THF   PL  +     +D    Q ++SE+E    S
Sbjct: 8   RPVFIVSDHTGLTAENIARALLTHFPGQPLRYLRRPFTSDAQAAQAVVSEVEALAAS 64

>CCD13_HUMAN (Q8IYE1) Coiled-coil domain-containing protein 13|
          Length = 715

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = -1

Query: 528 ERLVLRKQALQMKKRPVLAIGRNNVITGVAKTIRTHFKKHPLAVVNIKNRADGTPVQQL- 352
           ER VL+++  ++KK+      RN +++   KT+     K  +  + +K R D   +  L 
Sbjct: 334 ERDVLQRELEELKKKFEGMRSRNKLLSSEMKTL-----KSQMGTLVVKGRHDDELIDALM 388

Query: 351 --ISELEEATGSVLVSREPNKV 292
             + +L+E  GS+ +  E  +V
Sbjct: 389 DQLKQLQEILGSLSLQEEKTRV 410


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,640,282
Number of Sequences: 219361
Number of extensions: 2317888
Number of successful extensions: 7424
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7417
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)