ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39h06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZYG1_CAEEL (Q9GT24) Probable serine/threonine-protein kinase zyg... 28 6.7

>ZYG1_CAEEL (Q9GT24) Probable serine/threonine-protein kinase zyg-1 (EC|
           2.7.11.1) (Zygote defective protein 1)
          Length = 706

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = -2

Query: 157 DHSLEGHRSRL-QPVRAPREDRSR 89
           +HS +G R R  +PVR+ R+DRSR
Sbjct: 263 EHSRDGRRQRSREPVRSSRDDRSR 286


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,554,964
Number of Sequences: 219361
Number of extensions: 307577
Number of successful extensions: 940
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 80,573,946
effective HSP length: 39
effective length of database: 72,018,867
effective search space used: 1728452808
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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