ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AB257219.1| Phragmites australis PhaHAK4 mRNA for potassium ... 301 2e-78
2dbj|AB257218.1| Phragmites australis PhaHAK4 mRNA for potassium ... 301 2e-78
3ref|XM_450750.1| Oryza sativa (japonica cultivar-group), mRNA 260 6e-66
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 260 6e-66
5dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic D... 260 6e-66
6dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic D... 260 6e-66
7dbj|AK099766.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 6e-66
8dbj|AK070831.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 6e-66
9gb|AY106754.1| Zea mays PCO067360 mRNA sequence 244 4e-61
10dbj|AB257217.1| Phragmites australis PhaHAK4 mRNA for potassium ... 80 1e-11
11gb|AY111302.1| Zea mays CL24961_1 mRNA sequence 70 1e-08
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-06
13dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-06
14dbj|AK106582.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 3e-06
15dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-06
16gb|AC007569.22| Homo sapiens 12 BAC RP11-689B22 (Roswell Park Ca... 44 0.69
17gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 44 0.69
18gb|AY485619.1| Cryphonectria parasitica DNA-dependent RNA polyme... 42 2.7
19gb|AC158661.7| Mus musculus 6 BAC RP23-31E23 (Roswell Park Cance... 42 2.7
20gb|AC116703.10| Mus musculus chromosome 6, clone RP23-16O17, com... 42 2.7

>dbj|AB257219.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete
            cds, strain: Enchi
          Length = 2786

 Score =  301 bits (152), Expect = 2e-78
 Identities = 302/352 (85%)
 Strand = Plus / Minus

                                                                        
Query: 245  cgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttcaaggt 304
            ||||||||||||||| ||||| || |||||||||||||| |||||||| | |||||  ||
Sbjct: 2588 cgatcagaccatgtatgtcataccgacacgcatgatgtttgagtgaggaaccttcagtgt 2529

                                                                        
Query: 305  tgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatgaactt 364
            ||| |||||||||||||| |||||||| ||||| || ||||| ||||||||||| |||||
Sbjct: 2528 tgcagtgccagccctgcaattcctcctgaggaatgcatagaagtagttgatgataaactt 2469

                                                                        
Query: 365  ctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatatgtgaa 424
            |||  ||||||  |||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2468 cttcatgaagagcgattccttcctcgccctcacatcgccatgggccaagagatatgtgaa 2409

                                                                        
Query: 425  cccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtcttcttc 484
            |||||||||||||||||| ||||  || || |||||||||||||| |  |||||||||||
Sbjct: 2408 cccagatgccatggcttctctcaaagctgccagctcgtactctaaaccagggtcttcttc 2349

                                                                        
Query: 485  tgcagacatggagctagagggtagcaaaggaacgctgccttccatgcccagcatttcatt 544
            ||| ||||||||||| || || ||||| ||| | || |||||| ||   | ||||  |||
Sbjct: 2348 tgcggacatggagctggatggaagcaatggagcactaccttccgtgttgaacattctatt 2289

                                                                
Query: 545  gtcatcacccggtctctgatcagaaagcagtggagtgtgcagatcctcagca 596
            ||||||| ||  ||||||||||||||||||||||  |||||||||| |||||
Sbjct: 2288 gtcatcaaccaatctctgatcagaaagcagtggaacgtgcagatccccagca 2237



 Score =  186 bits (94), Expect = 8e-44
 Identities = 133/146 (91%)
 Strand = Plus / Minus

                                                                        
Query: 642  tcacgctctgcctccattgcgctcacctcaagcgcgagttcctgggcttccctcctcaga 701
            ||||||||||||||||||| |||| |||| ||||||| |||||||||||||||||||| |
Sbjct: 2194 tcacgctctgcctccattgtgctcgcctcgagcgcgatttcctgggcttccctcctcata 2135

                                                                        
Query: 702  aatttctctaggctttcaaccaagagatgctcaaatgagccatggtcctctttcctgaca 761
            |||||||| |||||||||||||| || ||||||||  ||||||| ||||||||||| |||
Sbjct: 2134 aatttctcgaggctttcaaccaaaagttgctcaaagaagccatgatcctctttcctaaca 2075

                                      
Query: 762  tccttgtaaccataccgtgcaacaca 787
            ||||| ||||||||||||||||||||
Sbjct: 2074 tccttataaccataccgtgcaacaca 2049



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 151  gtacaatccctaaactacctgctggtgtagcattccatccaagatg 196
            ||||||||||||||||||| ||||||| || || ||||||||||||
Sbjct: 2664 gtacaatccctaaactaccagctggtgcagtatcccatccaagatg 2619



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>dbj|AB257218.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete
            cds, strain: Nanpi
          Length = 2794

 Score =  301 bits (152), Expect = 2e-78
 Identities = 302/352 (85%)
 Strand = Plus / Minus

                                                                        
Query: 245  cgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttcaaggt 304
            ||||||||||||||| ||||| || |||||||||||||| |||||||| | |||||  ||
Sbjct: 2588 cgatcagaccatgtatgtcataccgacacgcatgatgtttgagtgaggaaccttcagtgt 2529

                                                                        
Query: 305  tgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatgaactt 364
            ||| |||||||||||||| |||||||| ||||| || ||||| ||||||||||| |||||
Sbjct: 2528 tgcagtgccagccctgcaattcctcctgaggaatgcatagaagtagttgatgataaactt 2469

                                                                        
Query: 365  ctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatatgtgaa 424
            |||  ||||||  |||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2468 cttcatgaagagcgattccttcctcgccctcacatcgccatgggccaagagatatgtgaa 2409

                                                                        
Query: 425  cccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtcttcttc 484
            |||||||||||||||||| ||||  || || |||||||||||||| |  |||||||||||
Sbjct: 2408 cccagatgccatggcttctctcaaagctgccagctcgtactctaaaccagggtcttcttc 2349

                                                                        
Query: 485  tgcagacatggagctagagggtagcaaaggaacgctgccttccatgcccagcatttcatt 544
            ||| ||||||||||| || || ||||| ||| | || |||||| ||   | ||||  |||
Sbjct: 2348 tgcggacatggagctggatggaagcaatggagcactaccttccgtgttgaacattctatt 2289

                                                                
Query: 545  gtcatcacccggtctctgatcagaaagcagtggagtgtgcagatcctcagca 596
            ||||||| ||  ||||||||||||||||||||||  |||||||||| |||||
Sbjct: 2288 gtcatcaaccaatctctgatcagaaagcagtggaacgtgcagatccccagca 2237



 Score =  186 bits (94), Expect = 8e-44
 Identities = 133/146 (91%)
 Strand = Plus / Minus

                                                                        
Query: 642  tcacgctctgcctccattgcgctcacctcaagcgcgagttcctgggcttccctcctcaga 701
            ||||||||||||||||||| |||| |||| ||||||| |||||||||||||||||||| |
Sbjct: 2194 tcacgctctgcctccattgtgctcgcctcgagcgcgatttcctgggcttccctcctcata 2135

                                                                        
Query: 702  aatttctctaggctttcaaccaagagatgctcaaatgagccatggtcctctttcctgaca 761
            |||||||| |||||||||||||| || ||||||||  ||||||| ||||||||||| |||
Sbjct: 2134 aatttctcgaggctttcaaccaaaagttgctcaaagaagccatgatcctctttcctaaca 2075

                                      
Query: 762  tccttgtaaccataccgtgcaacaca 787
            ||||| ||||||||||||||||||||
Sbjct: 2074 tccttataaccataccgtgcaacaca 2049



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 151  gtacaatccctaaactacctgctggtgtagcattccatccaagatg 196
            ||||||||||||||||||| ||||||| || || ||||||||||||
Sbjct: 2664 gtacaatccctaaactaccagctggtgcagtatcccatccaagatg 2619



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>ref|XM_450750.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3085

 Score =  260 bits (131), Expect = 6e-66
 Identities = 218/247 (88%)
 Strand = Plus / Minus

                                                                        
Query: 240  agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 299
            |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 2749 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 2690

                                                                        
Query: 300  aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 359
            ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 2689 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 2630

                                                                        
Query: 360  aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatat 419
            |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| |||
Sbjct: 2629 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagaggtat 2570

                                                                        
Query: 420  gtgaacccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtct 479
            ||||| ||||| || |||||||| ||||||| | | ||||| ||||| ||||||||||||
Sbjct: 2569 gtgaatccagaagctatggcttctctcagtgactccagctcatactccaagctggggtct 2510

                   
Query: 480  tcttctg 486
            |||||||
Sbjct: 2509 tcttctg 2503



 Score =  147 bits (74), Expect = 6e-32
 Identities = 137/158 (86%)
 Strand = Plus / Minus

                                                                        
Query: 631  cagacacatcatcacgctctgcctccattgcgctcacctcaagcgcgagttcctgggctt 690
            |||| ||||| ||||||||| |  ||||||||||  | ||||| || | |||||||| ||
Sbjct: 2364 cagaaacatcgtcacgctctactgccattgcgcttgcttcaagtgccatttcctgggatt 2305

                                                                        
Query: 691  ccctcctcagaaatttctctaggctttcaaccaagagatgctcaaatgagccatggtcct 750
            || |||||| ||||||||| ||| |||||||||| || ||||||||  ||||||| ||||
Sbjct: 2304 ccttcctcaaaaatttctccagggtttcaaccaaaagctgctcaaagaagccatgttcct 2245

                                                  
Query: 751  ctttcctgacatccttgtaaccataccgtgcaacacaa 788
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 2244 ctttcctgacatccttgtaaccataccgtgcaacacaa 2207



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 547  catcacccggtctctgatcagaaagcagtgga 578
            |||||||| | |||||||||||||||||||||
Sbjct: 2445 catcacccagcctctgatcagaaagcagtgga 2414



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  260 bits (131), Expect = 6e-66
 Identities = 218/247 (88%)
 Strand = Plus / Plus

                                                                            
Query: 240      agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 299
                |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 12609409 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 12609468

                                                                            
Query: 300      aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 359
                ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 12609469 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 12609528

                                                                            
Query: 360      aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatat 419
                |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| |||
Sbjct: 12609529 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagaggtat 12609588

                                                                            
Query: 420      gtgaacccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtct 479
                ||||| ||||| || |||||||| ||||||| | | ||||| ||||| ||||||||||||
Sbjct: 12609589 gtgaatccagaagctatggcttctctcagtgactccagctcatactccaagctggggtct 12609648

                       
Query: 480      tcttctg 486
                |||||||
Sbjct: 12609649 tcttctg 12609655



 Score =  147 bits (74), Expect = 6e-32
 Identities = 137/158 (86%)
 Strand = Plus / Plus

                                                                            
Query: 631      cagacacatcatcacgctctgcctccattgcgctcacctcaagcgcgagttcctgggctt 690
                |||| ||||| ||||||||| |  ||||||||||  | ||||| || | |||||||| ||
Sbjct: 12609794 cagaaacatcgtcacgctctactgccattgcgcttgcttcaagtgccatttcctgggatt 12609853

                                                                            
Query: 691      ccctcctcagaaatttctctaggctttcaaccaagagatgctcaaatgagccatggtcct 750
                || |||||| ||||||||| ||| |||||||||| || ||||||||  ||||||| ||||
Sbjct: 12609854 ccttcctcaaaaatttctccagggtttcaaccaaaagctgctcaaagaagccatgttcct 12609913

                                                      
Query: 751      ctttcctgacatccttgtaaccataccgtgcaacacaa 788
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 12609914 ctttcctgacatccttgtaaccataccgtgcaacacaa 12609951



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 547      catcacccggtctctgatcagaaagcagtgga 578
                |||||||| | |||||||||||||||||||||
Sbjct: 12609713 catcacccagcctctgatcagaaagcagtgga 12609744



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>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0041C07
          Length = 179047

 Score =  260 bits (131), Expect = 6e-66
 Identities = 218/247 (88%)
 Strand = Plus / Plus

                                                                         
Query: 240   agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 299
             |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 75347 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 75406

                                                                         
Query: 300   aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 359
             ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 75407 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 75466

                                                                         
Query: 360   aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatat 419
             |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| |||
Sbjct: 75467 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagaggtat 75526

                                                                         
Query: 420   gtgaacccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtct 479
             ||||| ||||| || |||||||| ||||||| | | ||||| ||||| ||||||||||||
Sbjct: 75527 gtgaatccagaagctatggcttctctcagtgactccagctcatactccaagctggggtct 75586

                    
Query: 480   tcttctg 486
             |||||||
Sbjct: 75587 tcttctg 75593



 Score =  147 bits (74), Expect = 6e-32
 Identities = 137/158 (86%)
 Strand = Plus / Plus

                                                                         
Query: 631   cagacacatcatcacgctctgcctccattgcgctcacctcaagcgcgagttcctgggctt 690
             |||| ||||| ||||||||| |  ||||||||||  | ||||| || | |||||||| ||
Sbjct: 75732 cagaaacatcgtcacgctctactgccattgcgcttgcttcaagtgccatttcctgggatt 75791

                                                                         
Query: 691   ccctcctcagaaatttctctaggctttcaaccaagagatgctcaaatgagccatggtcct 750
             || |||||| ||||||||| ||| |||||||||| || ||||||||  ||||||| ||||
Sbjct: 75792 ccttcctcaaaaatttctccagggtttcaaccaaaagctgctcaaagaagccatgttcct 75851

                                                   
Query: 751   ctttcctgacatccttgtaaccataccgtgcaacacaa 788
             ||||||||||||||||||||||||||||||||||||||
Sbjct: 75852 ctttcctgacatccttgtaaccataccgtgcaacacaa 75889



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 547   catcacccggtctctgatcagaaagcagtgga 578
             |||||||| | |||||||||||||||||||||
Sbjct: 75651 catcacccagcctctgatcagaaagcagtgga 75682



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>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0711A01
          Length = 162400

 Score =  260 bits (131), Expect = 6e-66
 Identities = 218/247 (88%)
 Strand = Plus / Plus

                                                                          
Query: 240    agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 299
              |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 124736 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 124795

                                                                          
Query: 300    aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 359
              ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 124796 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 124855

                                                                          
Query: 360    aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatat 419
              |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| |||
Sbjct: 124856 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagaggtat 124915

                                                                          
Query: 420    gtgaacccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtct 479
              ||||| ||||| || |||||||| ||||||| | | ||||| ||||| ||||||||||||
Sbjct: 124916 gtgaatccagaagctatggcttctctcagtgactccagctcatactccaagctggggtct 124975

                     
Query: 480    tcttctg 486
              |||||||
Sbjct: 124976 tcttctg 124982



 Score =  147 bits (74), Expect = 6e-32
 Identities = 137/158 (86%)
 Strand = Plus / Plus

                                                                          
Query: 631    cagacacatcatcacgctctgcctccattgcgctcacctcaagcgcgagttcctgggctt 690
              |||| ||||| ||||||||| |  ||||||||||  | ||||| || | |||||||| ||
Sbjct: 125121 cagaaacatcgtcacgctctactgccattgcgcttgcttcaagtgccatttcctgggatt 125180

                                                                          
Query: 691    ccctcctcagaaatttctctaggctttcaaccaagagatgctcaaatgagccatggtcct 750
              || |||||| ||||||||| ||| |||||||||| || ||||||||  ||||||| ||||
Sbjct: 125181 ccttcctcaaaaatttctccagggtttcaaccaaaagctgctcaaagaagccatgttcct 125240

                                                    
Query: 751    ctttcctgacatccttgtaaccataccgtgcaacacaa 788
              ||||||||||||||||||||||||||||||||||||||
Sbjct: 125241 ctttcctgacatccttgtaaccataccgtgcaacacaa 125278



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 547    catcacccggtctctgatcagaaagcagtgga 578
              |||||||| | |||||||||||||||||||||
Sbjct: 125040 catcacccagcctctgatcagaaagcagtgga 125071



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>dbj|AK099766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095A12, full
            insert sequence
          Length = 4054

 Score =  260 bits (131), Expect = 6e-66
 Identities = 218/247 (88%)
 Strand = Plus / Minus

                                                                        
Query: 240  agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 299
            |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 3748 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 3689

                                                                        
Query: 300  aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 359
            ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 3688 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 3629

                                                                        
Query: 360  aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatat 419
            |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| |||
Sbjct: 3628 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagaggtat 3569

                                                                        
Query: 420  gtgaacccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtct 479
            ||||| ||||| || |||||||| ||||||| | | ||||| ||||| ||||||||||||
Sbjct: 3568 gtgaatccagaagctatggcttctctcagtgactccagctcatactccaagctggggtct 3509

                   
Query: 480  tcttctg 486
            |||||||
Sbjct: 3508 tcttctg 3502



 Score =  147 bits (74), Expect = 6e-32
 Identities = 137/158 (86%)
 Strand = Plus / Minus

                                                                        
Query: 631  cagacacatcatcacgctctgcctccattgcgctcacctcaagcgcgagttcctgggctt 690
            |||| ||||| ||||||||| |  ||||||||||  | ||||| || | |||||||| ||
Sbjct: 3363 cagaaacatcgtcacgctctactgccattgcgcttgcttcaagtgccatttcctgggatt 3304

                                                                        
Query: 691  ccctcctcagaaatttctctaggctttcaaccaagagatgctcaaatgagccatggtcct 750
            || |||||| ||||||||| ||| |||||||||| || ||||||||  ||||||| ||||
Sbjct: 3303 ccttcctcaaaaatttctccagggtttcaaccaaaagctgctcaaagaagccatgttcct 3244

                                                  
Query: 751  ctttcctgacatccttgtaaccataccgtgcaacacaa 788
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 3243 ctttcctgacatccttgtaaccataccgtgcaacacaa 3206



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 547  catcacccggtctctgatcagaaagcagtgga 578
            |||||||| | |||||||||||||||||||||
Sbjct: 3444 catcacccagcctctgatcagaaagcagtgga 3413



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>dbj|AK070831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063B21, full
            insert sequence
          Length = 3081

 Score =  260 bits (131), Expect = 6e-66
 Identities = 218/247 (88%)
 Strand = Plus / Minus

                                                                        
Query: 240  agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 299
            |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 2745 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 2686

                                                                        
Query: 300  aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 359
            ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 2685 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 2626

                                                                        
Query: 360  aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatat 419
            |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| |||
Sbjct: 2625 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagaggtat 2566

                                                                        
Query: 420  gtgaacccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtct 479
            ||||| ||||| || |||||||| ||||||| | | ||||| ||||| ||||||||||||
Sbjct: 2565 gtgaatccagaagctatggcttctctcagtgactccagctcatactccaagctggggtct 2506

                   
Query: 480  tcttctg 486
            |||||||
Sbjct: 2505 tcttctg 2499



 Score =  147 bits (74), Expect = 6e-32
 Identities = 137/158 (86%)
 Strand = Plus / Minus

                                                                        
Query: 631  cagacacatcatcacgctctgcctccattgcgctcacctcaagcgcgagttcctgggctt 690
            |||| ||||| ||||||||| |  ||||||||||  | ||||| || | |||||||| ||
Sbjct: 2360 cagaaacatcgtcacgctctactgccattgcgcttgcttcaagtgccatttcctgggatt 2301

                                                                        
Query: 691  ccctcctcagaaatttctctaggctttcaaccaagagatgctcaaatgagccatggtcct 750
            || |||||| ||||||||| ||| |||||||||| || ||||||||  ||||||| ||||
Sbjct: 2300 ccttcctcaaaaatttctccagggtttcaaccaaaagctgctcaaagaagccatgttcct 2241

                                                  
Query: 751  ctttcctgacatccttgtaaccataccgtgcaacacaa 788
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 2240 ctttcctgacatccttgtaaccataccgtgcaacacaa 2203



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 547  catcacccggtctctgatcagaaagcagtgga 578
            |||||||| | |||||||||||||||||||||
Sbjct: 2441 catcacccagcctctgatcagaaagcagtgga 2410



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>gb|AY106754.1| Zea mays PCO067360 mRNA sequence
          Length = 1181

 Score =  244 bits (123), Expect = 4e-61
 Identities = 228/263 (86%)
 Strand = Plus / Minus

                                                                       
Query: 248 tcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttcaaggttgc 307
           |||||||||||||||||| || ||||||||||||||||| || || | ||||| ||||||
Sbjct: 884 tcagaccatgtacgtcataccaacacgcatgatgttcgaatgggggaccttcagggttgc 825

                                                                       
Query: 308 ggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatgaacttctt 367
            ||||| ||||||||||||||||| ||||| || |||||||||||||||| |||||||||
Sbjct: 824 agtgcccgccctgcagttcctcctgaggaacgcatagaaatagttgatgacgaacttctt 765

                                                                       
Query: 368 tgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatatgtgaaccc 427
            ||||||| ||||| |||||||||||||||||| || ||||| | |||||| || |||||
Sbjct: 764 cgtgaagactgattccttcctcgccctcacatctccgtgtgctaggagatacgtaaaccc 705

                                                                       
Query: 428 agatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtcttcttctgc 487
           ||| ||||||||||| ||||| || |  ||||||||||||||||  || |||||||||  
Sbjct: 704 agaggccatggcttctctcagagcagacagctcgtactctaagccaggatcttcttctaa 645

                                  
Query: 488 agacatggagctagagggtagca 510
           |||||||||||| ||||| ||||
Sbjct: 644 agacatggagctggaggggagca 622



 Score =  151 bits (76), Expect = 4e-33
 Identities = 130/148 (87%)
 Strand = Plus / Minus

                                                                       
Query: 639 tcatcacgctctgcctccattgcgctcacctcaagcgcgagttcctgggcttccctcctc 698
           |||||||||||||||||||||| |||| |||| ||||| | |||||||||||||||||| 
Sbjct: 496 tcatcacgctctgcctccattgtgctcgcctccagcgcaatttcctgggcttccctcctg 437

                                                                       
Query: 699 agaaatttctctaggctttcaaccaagagatgctcaaatgagccatggtcctctttcctg 758
           |||||||| || ||||| |||||||  || ||||||||  |||||||||| |||||||| 
Sbjct: 436 agaaatttttccaggctctcaaccagaagttgctcaaagaagccatggtcttctttccta 377

                                       
Query: 759 acatccttgtaaccataccgtgcaacac 786
           || |||||||||||||| ||||||||||
Sbjct: 376 acgtccttgtaaccatagcgtgcaacac 349



 Score = 44.1 bits (22), Expect = 0.69
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 557 tctctgatcagaaagcagtggagtgtgcag 586
           |||||| ||||||||||||||||| |||||
Sbjct: 575 tctctggtcagaaagcagtggagtttgcag 546



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>dbj|AB257217.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete
            cds, strain: Utsunomiya
          Length = 2484

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                        
Query: 724  agagatgctcaaatgagccatggtcctctttcctgacatccttgtaaccataccgtgcaa 783
            |||| ||||||||  ||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct: 2159 agagttgctcaaagaagccatgatcctctttcctaacatccttataaccataccgtgcaa 2100

                
Query: 784  caca 787
            ||||
Sbjct: 2099 caca 2096



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 246  gatcagaccatgtacgtcatccctacacgcatgatgttcgagtgagg 292
            |||||||||||||| ||||| || |||||||||||||| ||||||||
Sbjct: 2213 gatcagaccatgtatgtcataccgacacgcatgatgtttgagtgagg 2167



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 151  gtacaatccctaaactacctgctggtgtagcattccatccaagatg 196
            ||||||||||||||||||| |||||||||| || ||| ||||||||
Sbjct: 2290 gtacaatccctaaactaccagctggtgtagtatcccacccaagatg 2245



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>gb|AY111302.1| Zea mays CL24961_1 mRNA sequence
          Length = 637

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                  
Query: 317 cctgcagttcctcctcaggaaagcgtagaaatagttgat 355
           |||||||||||||||||||||||| ||||||||||||||
Sbjct: 292 cctgcagttcctcctcaggaaagcatagaaatagttgat 330



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 317      cctgcagttcctcctcaggaaagcgtagaaatagttgat 355
                ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 19325595 cctgcagttcctcctcaagaaggcgtagaaatagttgat 19325633



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>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0409B11
          Length = 168354

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                    
Query: 317   cctgcagttcctcctcaggaaagcgtagaaatagttgat 355
             ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 15133 cctgcagttcctcctcaagaaggcgtagaaatagttgat 15171



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>dbj|AK106582.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-E03, full
            insert sequence
          Length = 1549

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 317  cctgcagttcctcctcaggaaagcgtagaaatagttgat 355
            ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 1255 cctgcagttcctcctcaagaaggcgtagaaatagttgat 1217



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>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1163_G04
          Length = 106253

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                     
Query: 317    cctgcagttcctcctcaggaaagcgtagaaatagttgat 355
              ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 101821 cctgcagttcctcctcaagaaggcgtagaaatagttgat 101859



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>gb|AC007569.22| Homo sapiens 12 BAC RP11-689B22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 111074

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 747   tcctctttcctgacatccttgt 768
             ||||||||||||||||||||||
Sbjct: 61255 tcctctttcctgacatccttgt 61234



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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 594     gcaggagcagcaggcgattgaa 615
               ||||||||||||||||||||||
Sbjct: 4188659 gcaggagcagcaggcgattgaa 4188680



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>gb|AY485619.1| Cryphonectria parasitica DNA-dependent RNA polymerase II second
           largest subunit gene, partial cds
          Length = 2889

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 229 aggcgcagccgagccccgatc 249
           |||||||||||||||||||||
Sbjct: 63  aggcgcagccgagccccgatc 83



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>gb|AC158661.7| Mus musculus 6 BAC RP23-31E23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 181763

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 48     gaaaatgttggcaagaataca 68
              |||||||||||||||||||||
Sbjct: 164192 gaaaatgttggcaagaataca 164212



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>gb|AC116703.10| Mus musculus chromosome 6, clone RP23-16O17, complete sequence
          Length = 202915

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    gaaaatgttggcaagaataca 68
             |||||||||||||||||||||
Sbjct: 10599 gaaaatgttggcaagaataca 10619


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,519,977
Number of Sequences: 3902068
Number of extensions: 6519977
Number of successful extensions: 122591
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122412
Number of HSP's gapped (non-prelim): 177
length of query: 788
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 765
effective length of database: 17,143,297,704
effective search space: 13114622743560
effective search space used: 13114622743560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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