ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags39g18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483236.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2800 Score = 206 bits (104), Expect = 7e-50 Identities = 272/328 (82%) Strand = Plus / Minus Query: 320 aaggtggagcgctcttgtcgaacagggacgccaggggcgagtccaggtcatctagatcgt 379 |||| |||||||| ||||||| ||||| || ||||| || ||||||||||| ||||| | Sbjct: 2374 aaggcggagcgcttttgtcgataagggatgcgaggggagaatccaggtcatccagatcat 2315 Query: 380 cgtcgctggtgtaccctctcctctgtaccattgaggccctcctgtccagcttcgcgctgc 439 | || |||||||| ||||||||||| |||||||| || |||||||| ||||| || ||| Sbjct: 2314 catcactggtgtatcctctcctctggaccattgacgctctcctgtctagctttgcattgc 2255 Query: 440 ctccggctaccgacactttctcctccacatccagttgggaaggggagcggtacgcgatag 499 | || | ||| ||||||||| ||||||||||| |||| || | ||||||| | | || Sbjct: 2254 caccagtgtccgccactttctctgccacatccagtagggatggagggcggtacacaacag 2195 Query: 500 gagcagcgatgcacgggaatgcgctgatcgcacgttttgcggtgtcacgatccagcaagc 559 |||||||||| || || ||||||||| | |||| ||| ||||| || |||||||| | Sbjct: 2194 gagcagcgatacatggaaatgcgctggttgcacttttgtcggtgcatcgctccagcaaac 2135 Query: 560 tctcagaatacagctcctctaggactatgctagggaccggatcggggcagaactcgtcag 619 ||||||||| |||||||||||||||||||||||| || ||||| || |||||||| |||| Sbjct: 2134 tctcagaattcagctcctctaggactatgctaggaacaggatcaggacagaactcatcag 2075 Query: 620 gggtgaagttgcacaggattcttgttac 647 | ||||||||||| |||||||||||||| Sbjct: 2074 gagtgaagttgcataggattcttgttac 2047
>dbj|AK067190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094E14, full insert sequence Length = 2799 Score = 206 bits (104), Expect = 7e-50 Identities = 272/328 (82%) Strand = Plus / Minus Query: 320 aaggtggagcgctcttgtcgaacagggacgccaggggcgagtccaggtcatctagatcgt 379 |||| |||||||| ||||||| ||||| || ||||| || ||||||||||| ||||| | Sbjct: 2373 aaggcggagcgcttttgtcgataagggatgcgaggggagaatccaggtcatccagatcat 2314 Query: 380 cgtcgctggtgtaccctctcctctgtaccattgaggccctcctgtccagcttcgcgctgc 439 | || |||||||| ||||||||||| |||||||| || |||||||| ||||| || ||| Sbjct: 2313 catcactggtgtatcctctcctctggaccattgacgctctcctgtctagctttgcattgc 2254 Query: 440 ctccggctaccgacactttctcctccacatccagttgggaaggggagcggtacgcgatag 499 | || | ||| ||||||||| ||||||||||| |||| || | ||||||| | | || Sbjct: 2253 caccagtgtccgccactttctctgccacatccagtagggatggagggcggtacacaacag 2194 Query: 500 gagcagcgatgcacgggaatgcgctgatcgcacgttttgcggtgtcacgatccagcaagc 559 |||||||||| || || ||||||||| | |||| ||| ||||| || |||||||| | Sbjct: 2193 gagcagcgatacatggaaatgcgctggttgcacttttgtcggtgcatcgctccagcaaac 2134 Query: 560 tctcagaatacagctcctctaggactatgctagggaccggatcggggcagaactcgtcag 619 ||||||||| |||||||||||||||||||||||| || ||||| || |||||||| |||| Sbjct: 2133 tctcagaattcagctcctctaggactatgctaggaacaggatcaggacagaactcatcag 2074 Query: 620 gggtgaagttgcacaggattcttgttac 647 | ||||||||||| |||||||||||||| Sbjct: 2073 gagtgaagttgcataggattcttgttac 2046
>gb|BT016588.1| Zea mays clone Contig421 mRNA sequence Length = 1579 Score = 113 bits (57), Expect = 8e-22 Identities = 102/117 (87%) Strand = Plus / Minus Query: 320 aaggtggagcgctcttgtcgaacagggacgccaggggcgagtccaggtcatctagatcgt 379 ||||||| |||||| |||||| ||||| || ||||| || |||||||| || || |||| Sbjct: 1207 aaggtggggcgctcctgtcgattagggatgcgaggggagaatccaggtcgtcaaggtcgt 1148 Query: 380 cgtcgctggtgtaccctctcctctgtaccattgaggccctcctgtccagcttcgcgc 436 |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 1147 cgtcactggtgtaccctctcctctgcaccattgaggctttcctgtccagcttcgcgc 1091 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 550 tccagcaagctctcagaatacagctcctctaggactatgctagggaccggatcggggcag 609 |||||||||||||| |||| |||||| |||| ||| |||| || |||||||| ||||| Sbjct: 977 tccagcaagctctcggaattcagctcttctaagaccgtgcttggaaccggatcagggcaa 918 Query: 610 aactcgtcaggggtgaagttgcacaggat 638 ||||| || |||||||||||||||||||| Sbjct: 917 aactcatctggggtgaagttgcacaggat 889
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 561 ctcagaatacagctcctctaggactatgctagggaccggatcggggcagaactcgtcagg 620 |||||||| |||||||||||||||||||||||| || ||||| || |||||||| ||||| Sbjct: 24982403 ctcagaattcagctcctctaggactatgctaggaacaggatcaggacagaactcatcagg 24982344 Query: 621 ggtgaagttgcacaggattcttgttac 647 ||||||||||| |||||||||||||| Sbjct: 24982343 agtgaagttgcataggattcttgttac 24982317 Score = 107 bits (54), Expect = 5e-20 Identities = 168/206 (81%) Strand = Plus / Minus Query: 320 aaggtggagcgctcttgtcgaacagggacgccaggggcgagtccaggtcatctagatcgt 379 |||| |||||||| ||||||| ||||| || ||||| || ||||||||||| ||||| | Sbjct: 24982757 aaggcggagcgcttttgtcgataagggatgcgaggggagaatccaggtcatccagatcat 24982698 Query: 380 cgtcgctggtgtaccctctcctctgtaccattgaggccctcctgtccagcttcgcgctgc 439 | || |||||||| ||||||||||| |||||||| || |||||||| ||||| || ||| Sbjct: 24982697 catcactggtgtatcctctcctctggaccattgacgctctcctgtctagctttgcattgc 24982638 Query: 440 ctccggctaccgacactttctcctccacatccagttgggaaggggagcggtacgcgatag 499 | || | ||| ||||||||| ||||||||||| |||| || | ||||||| | | || Sbjct: 24982637 caccagtgtccgccactttctctgccacatccagtagggatggagggcggtacacaacag 24982578 Query: 500 gagcagcgatgcacgggaatgcgctg 525 |||||||||| || || ||||||||| Sbjct: 24982577 gagcagcgatacatggaaatgcgctg 24982552 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atacactactacagaaaaga 37 |||||||||||||||||||| Sbjct: 9995059 atacactactacagaaaaga 9995078
>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0025J22 Length = 175355 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 561 ctcagaatacagctcctctaggactatgctagggaccggatcggggcagaactcgtcagg 620 |||||||| |||||||||||||||||||||||| || ||||| || |||||||| ||||| Sbjct: 38519 ctcagaattcagctcctctaggactatgctaggaacaggatcaggacagaactcatcagg 38460 Query: 621 ggtgaagttgcacaggattcttgttac 647 ||||||||||| |||||||||||||| Sbjct: 38459 agtgaagttgcataggattcttgttac 38433 Score = 107 bits (54), Expect = 5e-20 Identities = 168/206 (81%) Strand = Plus / Minus Query: 320 aaggtggagcgctcttgtcgaacagggacgccaggggcgagtccaggtcatctagatcgt 379 |||| |||||||| ||||||| ||||| || ||||| || ||||||||||| ||||| | Sbjct: 38873 aaggcggagcgcttttgtcgataagggatgcgaggggagaatccaggtcatccagatcat 38814 Query: 380 cgtcgctggtgtaccctctcctctgtaccattgaggccctcctgtccagcttcgcgctgc 439 | || |||||||| ||||||||||| |||||||| || |||||||| ||||| || ||| Sbjct: 38813 catcactggtgtatcctctcctctggaccattgacgctctcctgtctagctttgcattgc 38754 Query: 440 ctccggctaccgacactttctcctccacatccagttgggaaggggagcggtacgcgatag 499 | || | ||| ||||||||| ||||||||||| |||| || | ||||||| | | || Sbjct: 38753 caccagtgtccgccactttctctgccacatccagtagggatggagggcggtacacaacag 38694 Query: 500 gagcagcgatgcacgggaatgcgctg 525 |||||||||| || || ||||||||| Sbjct: 38693 gagcagcgatacatggaaatgcgctg 38668
>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_H03 Length = 135914 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 561 ctcagaatacagctcctctaggactatgctagggaccggatcggggcagaactcgtcagg 620 |||||||| |||||||||||||||||||||||| || ||||| || |||||||| ||||| Sbjct: 84118 ctcagaattcagctcctctaggactatgctaggaacaggatcaggacagaactcatcagg 84059 Query: 621 ggtgaagttgcacaggattcttgttac 647 ||||||||||| |||||||||||||| Sbjct: 84058 agtgaagttgcataggattcttgttac 84032 Score = 107 bits (54), Expect = 5e-20 Identities = 168/206 (81%) Strand = Plus / Minus Query: 320 aaggtggagcgctcttgtcgaacagggacgccaggggcgagtccaggtcatctagatcgt 379 |||| |||||||| ||||||| ||||| || ||||| || ||||||||||| ||||| | Sbjct: 84472 aaggcggagcgcttttgtcgataagggatgcgaggggagaatccaggtcatccagatcat 84413 Query: 380 cgtcgctggtgtaccctctcctctgtaccattgaggccctcctgtccagcttcgcgctgc 439 | || |||||||| ||||||||||| |||||||| || |||||||| ||||| || ||| Sbjct: 84412 catcactggtgtatcctctcctctggaccattgacgctctcctgtctagctttgcattgc 84353 Query: 440 ctccggctaccgacactttctcctccacatccagttgggaaggggagcggtacgcgatag 499 | || | ||| ||||||||| ||||||||||| |||| || | ||||||| | | || Sbjct: 84352 caccagtgtccgccactttctctgccacatccagtagggatggagggcggtacacaacag 84293 Query: 500 gagcagcgatgcacgggaatgcgctg 525 |||||||||| || || ||||||||| Sbjct: 84292 gagcagcgatacatggaaatgcgctg 84267
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 101 bits (51), Expect = 3e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 322 ggtggagcgctcttgtcgaacagggacgccaggggcgagtccaggtcatctagatcgtcg 381 ||||||| |||| ||||| |||||||||||||||| | ||||||| || || |||||| Sbjct: 12209 ggtggagagctcctgtcgtacagggacgccagggggttgcccaggtcgtccaggtcgtcg 12268 Query: 382 tcgctggtgtaccctctcctctgtaccattgaggccctc 420 ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 12269 tcgctggtgtaccctctcctctgcaccatggaggccctc 12307 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 607 cagaactcgtcaggggtgaagttgcacaggattcttgttacaagtggaa 655 |||||||||||||| ||||||||||| || || |||||||| ||||||| Sbjct: 12648 cagaactcgtcaggagtgaagttgcagagtatccttgttaccagtggaa 12696
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 101 bits (51), Expect = 3e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 322 ggtggagcgctcttgtcgaacagggacgccaggggcgagtccaggtcatctagatcgtcg 381 ||||||| |||| ||||| |||||||||||||||| | ||||||| || || |||||| Sbjct: 18614336 ggtggagagctcctgtcgtacagggacgccagggggttgcccaggtcgtccaggtcgtcg 18614395 Query: 382 tcgctggtgtaccctctcctctgtaccattgaggccctc 420 ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 18614396 tcgctggtgtaccctctcctctgcaccatggaggccctc 18614434 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 607 cagaactcgtcaggggtgaagttgcacaggattcttgttacaagtggaa 655 |||||||||||||| ||||||||||| || || |||||||| ||||||| Sbjct: 18614775 cagaactcgtcaggagtgaagttgcagagtatccttgttaccagtggaa 18614823
>dbj|AK070460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048I06, full insert sequence Length = 2875 Score = 101 bits (51), Expect = 3e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 322 ggtggagcgctcttgtcgaacagggacgccaggggcgagtccaggtcatctagatcgtcg 381 ||||||| |||| ||||| |||||||||||||||| | ||||||| || || |||||| Sbjct: 2583 ggtggagagctcctgtcgtacagggacgccagggggttgcccaggtcgtccaggtcgtcg 2524 Query: 382 tcgctggtgtaccctctcctctgtaccattgaggccctc 420 ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 2523 tcgctggtgtaccctctcctctgcaccatggaggccctc 2485 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 550 tccagcaagctctcagaatacagctcctctaggactatgctagggaccggatcggggcag 609 |||||||||||||| | || ||||||||||| || || | ||| || || || || ||| Sbjct: 2355 tccagcaagctctcggcattcagctcctctaaaaccattccaggaacaggttcaggacag 2296 Query: 610 aactcgtcaggggtgaagttgcacaggattcttgttacaagtggaa 655 ||||||||||| ||||||||||| || || |||||||| ||||||| Sbjct: 2295 aactcgtcaggagtgaagttgcagagtatccttgttaccagtggaa 2250
>gb|AY109660.1| Zea mays CL11031_1 mRNA sequence Length = 1000 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 550 tccagcaagctctcagaatacagctcctctaggactatgctagggaccggatcggggcag 609 |||||||||||||| |||| |||||| |||| ||| |||| || |||||||| ||||| Sbjct: 594 tccagcaagctctccgaattcagctcttctaagaccgtgcttggaaccggatcagggcaa 653 Query: 610 aactcgtcaggggtgaagttgcacaggat 638 ||||| || |||||||||||||||||||| Sbjct: 654 aactcatctggggtgaagttgcacaggat 682 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 385 ctggtgtaccctctcctctgtaccattgaggccctcctgtccagcttcgcgc 436 |||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 429 ctggtgtaccctctcctctgcaccattgaggctttcctgtccagcttcgcgc 480
>gb|AC102311.10| Mus musculus chromosome 1, clone RP24-426M1, complete sequence Length = 175758 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacagta 51 |||||||||||||||||||||| Sbjct: 69884 agaaaagaaaaaagaaacagta 69905
>gb|AC125055.3| Mus musculus BAC clone RP23-397L11 from chromosome 7, complete sequence Length = 209066 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 actacagaaaagaaaaaagaaa 46 |||||||||||||||||||||| Sbjct: 154079 actacagaaaagaaaaaagaaa 154058
>gb|AC147158.3| Pan troglodytes BAC clone CH251-137M10 from Y, complete sequence Length = 167138 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacagta 51 |||||||||||||||||||||| Sbjct: 103655 agaaaagaaaaaagaaacagta 103676
>dbj|BS000641.4| Pan troglodytes chromosome Y clone: PTB-094I22, complete sequence Length = 190308 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacagta 51 |||||||||||||||||||||| Sbjct: 42512 agaaaagaaaaaagaaacagta 42491
>dbj|BS000634.2| Pan troglodytes chromosome Y clone: PTB-592K24, complete sequence Length = 170276 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacagta 51 |||||||||||||||||||||| Sbjct: 133047 agaaaagaaaaaagaaacagta 133026
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacagta 51 |||||||||||||||||||||| Sbjct: 17363947 agaaaagaaaaaagaaacagta 17363968
>gb|AC004772.2|AC004772 Homo sapiens chromosome Y, clone hCIT.144_J_1, complete sequence Length = 112999 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacagta 51 |||||||||||||||||||||| Sbjct: 105933 agaaaagaaaaaagaaacagta 105954
>gb|AC084456.1|AC084456 Caenorhabditis briggsae cosmid CB029P18, complete sequence Length = 87408 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacagta 51 |||||||||||||||||||||| Sbjct: 8405 agaaaagaaaaaagaaacagta 8426
>gb|AC153890.8| Mus musculus BAC RP23-403C13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202932 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 27 tacagaaaagaaaaaagaaacagtat 52 |||||||||||||| ||||||||||| Sbjct: 199895 tacagaaaagaaaatagaaacagtat 199920
>gb|AC093478.9| Mus musculus chromosome 10, clone RP23-58C12, complete sequence Length = 242324 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 27 tacagaaaagaaaaaagaaacagtat 52 |||||||||||||| ||||||||||| Sbjct: 195003 tacagaaaagaaaatagaaacagtat 194978
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 493 gcgataggagcagcgatgcacggga 517 |||||||| |||||||||||||||| Sbjct: 177801 gcgataggtgcagcgatgcacggga 177777
>gb|AC159436.1| Trypanosoma brucei chromosome 5 clone RPCI93-29K2, complete sequence Length = 135147 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 493 gcgataggagcagcgatgcacggga 517 |||||||| |||||||||||||||| Sbjct: 115675 gcgataggtgcagcgatgcacggga 115651
>gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L1) gene, complete cds Length = 660392 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacagtatatatgt 58 |||||||||||||||||||| | |||||| Sbjct: 517541 agaaaagaaaaaagaaacagaaaatatgt 517569
>emb|AJ131112.2|SSC131112 Sus scrofa MHC class I SLA genes, haplotype H01, clone BAC 490B10 Length = 154782 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 acagaaaagaaaaaagaaaca 48 ||||||||||||||||||||| Sbjct: 27480 acagaaaagaaaaaagaaaca 27460
>ref|XM_819370.1| Trypanosoma brucei TREU927 clone RPCI93-29K2 hypothetical protein (Tb927.5.570) partial mRNA Length = 6384 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 493 gcgataggagcagcgatgcacggga 517 |||||||| |||||||||||||||| Sbjct: 4238 gcgataggtgcagcgatgcacggga 4262
>gb|AC125481.23| Medicago truncatula clone mth2-15n13, complete sequence Length = 121953 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 cctagttctgctgcaaaagca 109 ||||||||||||||||||||| Sbjct: 64043 cctagttctgctgcaaaagca 64063
>emb|Z71255.1|SCCHRXVI S.cerevisiae chromosome XVI 165536 bp sequence, cen rightwards Length = 165536 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacagt 50 ||||||||||||||||||||| Sbjct: 150609 agaaaagaaaaaagaaacagt 150629
>emb|Z49219.1|SC9499X S.cerevisiae chromosome XVI cosmid 9499 Length = 43776 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacagt 50 ||||||||||||||||||||| Sbjct: 28849 agaaaagaaaaaagaaacagt 28869
>emb|X60458.1|SCROX1R S.cerevisiae ROX1 gene for ROX1 repressor Length = 2150 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacagt 50 ||||||||||||||||||||| Sbjct: 1847 agaaaagaaaaaagaaacagt 1867
>gb|AC096751.3| Homo sapiens BAC clone RP11-440I14 from 4, complete sequence Length = 174642 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaaagaaacagtat 52 ||||||||||||||||||||| Sbjct: 14039 aaaagaaaaaagaaacagtat 14059
>gb|AC020556.7| Homo sapiens BAC clone RP11-507B10 from 4, complete sequence Length = 186092 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 acagaaaagaaaaaagaaaca 48 ||||||||||||||||||||| Sbjct: 152222 acagaaaagaaaaaagaaaca 152242
>gb|AC148683.1| Macaca mulatta Major Histocompatibility Complex BAC MMU162B17, complete sequence Length = 181079 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 acagaaaagaaaaaagaaaca 48 ||||||||||||||||||||| Sbjct: 54766 acagaaaagaaaaaagaaaca 54786
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 cactactacagaaaagaaaaa 41 ||||||||||||||||||||| Sbjct: 25229820 cactactacagaaaagaaaaa 25229840 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaaaaagaaacagtatatat 56 |||||||||||||||||||| Sbjct: 9934974 aaaaaagaaacagtatatat 9934993
>gb|AC129935.8| Mus musculus chromosome 15, clone RP23-269P8, complete sequence Length = 183894 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacagt 50 ||||||||||||||||||||| Sbjct: 134197 agaaaagaaaaaagaaacagt 134177
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 acagaaaagaaaaaagaaaca 48 ||||||||||||||||||||| Sbjct: 2167368 acagaaaagaaaaaagaaaca 2167348
>gb|AC108476.5| Homo sapiens BAC clone RP11-1413K20 from 2, complete sequence Length = 139342 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctacagaaaagaaaaaagaaa 46 ||||||||||||||||||||| Sbjct: 127557 ctacagaaaagaaaaaagaaa 127577
>emb|BX322555.7| Zebrafish DNA sequence from clone DKEY-19D21 in linkage group 15, complete sequence Length = 209310 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacagt 50 ||||||||||||||||||||| Sbjct: 103184 agaaaagaaaaaagaaacagt 103164
>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1469H02 Length = 136602 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 cactactacagaaaagaaaaa 41 ||||||||||||||||||||| Sbjct: 130213 cactactacagaaaagaaaaa 130233
>emb|AL122013.5|CNS01DSU Human chromosome 14 DNA sequence BAC R-204K16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173010 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacagtatatatgt 58 |||||||||||||||||||| | |||||| Sbjct: 123788 agaaaagaaaaaagaaacagaaaatatgt 123760
>ref|NM_129794.1| Arabidopsis thaliana unknown protein AT2G42320 transcript variant AT2G42320.1 mRNA, complete cds Length = 2145 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 607 cagaactcgtcaggggtgaagttgcacaggattctt 642 |||||||| ||||| ||||||||||| || |||||| Sbjct: 1679 cagaactcatcaggagtgaagttgcagagtattctt 1644
>ref|NM_001036454.1| Arabidopsis thaliana unknown protein AT2G42320 transcript variant AT2G42320.2 mRNA, complete cds Length = 2284 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 607 cagaactcgtcaggggtgaagttgcacaggattctt 642 |||||||| ||||| ||||||||||| || |||||| Sbjct: 1818 cagaactcatcaggagtgaagttgcagagtattctt 1783
>ref|NM_180364.2| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> AT3G53570 (AFC1) transcript variant AT3G53570.1 mRNA, complete cds Length = 1887 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 1782 agaaaagaaaaaagaaacag 1801
>ref|NM_202696.1| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> AT3G53570 (AFC1) transcript variant AT3G53570.3 mRNA, complete cds Length = 1659 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 1554 agaaaagaaaaaagaaacag 1573
>ref|NM_115217.1| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> AT3G53570 (AFC1) transcript variant AT3G53570.2 mRNA, complete cds Length = 1732 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 1580 agaaaagaaaaaagaaacag 1599
>ref|NM_001035776.1| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> AT3G53570 (AFC1) transcript variant AT3G53570.4 mRNA, complete cds Length = 1847 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 1581 agaaaagaaaaaagaaacag 1600
>gb|AC164878.2| Mus musculus BAC clone RP23-364G24 from chromosome 13, complete sequence Length = 181893 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acagaaaagaaaaaagaaac 47 |||||||||||||||||||| Sbjct: 151761 acagaaaagaaaaaagaaac 151780
>gb|AC165367.5| Mus musculus BAC clone RP23-23P3 from chromosome 5, complete sequence Length = 234584 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaaagaaacagta 51 |||||||||||||||||||| Sbjct: 223764 aaaagaaaaaagaaacagta 223783
>gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section 6 of 9 of the complete sequence Length = 250421 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 50650 agaaaagaaaaaagaaacag 50669
>gb|AC109283.8| Mus musculus chromosome 1, clone RP24-156F3, complete sequence Length = 133845 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaaagaaacagta 51 |||||||||||||||||||| Sbjct: 14640 aaaagaaaaaagaaacagta 14621
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cagaaaagaaaaaagaaaca 48 |||||||||||||||||||| Sbjct: 2551139 cagaaaagaaaaaagaaaca 2551158
>gb|AC113987.11| Mus musculus chromosome 9, clone RP24-106M14, complete sequence Length = 170828 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 115088 agaaaagaaaaaagaaacag 115069
>gb|AY356129.1| Canis familiaris isolate cOR52L3 olfactory receptor family 52 subfamily L-like gene, partial sequence Length = 513 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acagaaaagaaaaaagaaac 47 |||||||||||||||||||| Sbjct: 25 acagaaaagaaaaaagaaac 6
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gctcgaacctcgcgttctcc 267 |||||||||||||||||||| Sbjct: 8032787 gctcgaacctcgcgttctcc 8032806
>gb|AC125326.4| Mus musculus BAC clone RP23-320H13 from chromosome 5, complete sequence Length = 216667 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaaagaaacagta 51 |||||||||||||||||||| Sbjct: 171095 aaaagaaaaaagaaacagta 171076
>gb|AC141926.3| Mus musculus BAC clone RP23-299D9 from chromosome 5, complete sequence Length = 204518 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaaagaaacagta 51 |||||||||||||||||||| Sbjct: 6299 aaaagaaaaaagaaacagta 6280
>emb|CT025868.1| Human DNA sequence from clone XX-HCC1954_31O13, complete sequence Length = 84064 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 31314 agaaaagaaaaaagaaacag 31333
>gb|AC127363.3| Mus musculus BAC clone RP23-1D23 from chromosome 8, complete sequence Length = 180977 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cagaaaagaaaaaagaaaca 48 |||||||||||||||||||| Sbjct: 10874 cagaaaagaaaaaagaaaca 10855
>gb|AC125057.5| Mus musculus BAC clone RP23-399K1 from chromosome 12, complete sequence Length = 182276 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tacagaaaagaaaaaagaaa 46 |||||||||||||||||||| Sbjct: 112689 tacagaaaagaaaaaagaaa 112708
>emb|CR361555.8| Zebrafish DNA sequence from clone CH211-215D20 in linkage group 11, complete sequence Length = 202951 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 aaaagaaaaaagaaacagtatata 55 ||||||||||||||||| |||||| Sbjct: 190664 aaaagaaaaaagaaacattatata 190641 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 aaaagaaaaaagaaacagtatata 55 ||||||||||||||||| |||||| Sbjct: 182485 aaaagaaaaaagaaacattatata 182462
>gb|AC130891.4| Homo sapiens 12 BAC RP11-97F22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 32143 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 31623 agaaaagaaaaaagaaacag 31604
>gb|AC124533.4| Mus musculus BAC clone RP23-316F7 from chromosome 5, complete sequence Length = 175666 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaaagaaacagta 51 |||||||||||||||||||| Sbjct: 43496 aaaagaaaaaagaaacagta 43477
>gb|AC122836.4| Mus musculus BAC clone RP23-188B13 from 7, complete sequence Length = 222390 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 136223 agaaaagaaaaaagaaacag 136204
>emb|AL713986.10| Mouse DNA sequence from clone RP23-142G13 on chromosome X, complete sequence Length = 204903 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 aaaagagtagtaactataga 183 |||||||||||||||||||| Sbjct: 169209 aaaagagtagtaactataga 169190
>gb|AC104073.3| Homo sapiens BAC clone RP11-328P23 from 7, complete sequence Length = 178670 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 84952 agaaaagaaaaaagaaacag 84933
>gb|AC109214.6| Mus musculus chromosome 10, clone RP23-352E22, complete sequence Length = 175569 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 tatatatgtagagatgtacaaaga 73 |||||||||||||| ||||||||| Sbjct: 22334 tatatatgtagagaagtacaaaga 22357
>emb|Z82201.1|HS345P10 Human DNA sequence from clone RP3-345P10 on chromosome 22, complete sequence Length = 137785 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 18218 agaaaagaaaaaagaaacag 18237
>emb|AL592426.9| Human DNA sequence from clone RP11-360D14 on chromosome 6 Contains the gene for a novel protein similar to GNDF family receptor alpha 4 (GFRA4), complete sequence Length = 107647 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaaagaaacagta 51 |||||||||||||||||||| Sbjct: 89323 aaaagaaaaaagaaacagta 89342
>emb|AL590670.12| Human DNA sequence from clone RP13-231E15 on chromosome 6, complete sequence Length = 38152 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ctactacagaaaagaaaaaagaaa 46 ||||||||||||| |||||||||| Sbjct: 18483 ctactacagaaaataaaaaagaaa 18506
>emb|AL451136.11| Human DNA sequence from clone RP11-291L19 on chromosome 1 Contains the 5' end of the TESK2 gene for testis-specific kinase 2, a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene, a novel gene, a novel gene (DKFZP564I122) and the 3' end of the PRDX1 gene for peroxiredoxin 1, complete sequence Length = 137143 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acagaaaagaaaaaagaaac 47 |||||||||||||||||||| Sbjct: 77933 acagaaaagaaaaaagaaac 77952
>emb|AL355332.8| Human DNA sequence from clone RP11-390F23 on chromosome 10 Contains a CpG island, complete sequence Length = 182997 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gaaaagaaaaaagaaacagt 50 |||||||||||||||||||| Sbjct: 107112 gaaaagaaaaaagaaacagt 107093
>gb|AC119619.5| Homo sapiens X BAC RP11-1J4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 94158 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 gaaaaaagaaacagtatatatgta 59 ||||||||||||| |||||||||| Sbjct: 30687 gaaaaaagaaacattatatatgta 30664
>emb|AL049569.13|HSDJ37C10 Human DNA sequence from clone RP1-37C10 on chromosome 1p35.2-35.21 Contains the 3' end of the CROCC gene for ciliary rootlet coiled-coil rootletin (KIAA0445), the MFAP2 gene for microfibrillar-associated protein 2, a novel gene, the gene for a novel protein, the SDHB gene for succinate dehydrogenase complex subunit B iron sulfur (Ip), the PADI2 gene for type II peptidyl arginine deiminase, complete sequence Length = 216497 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 94903 agaaaagaaaaaagaaacag 94922
>emb|AL030996.1|HS1189B24 Human DNA sequence from clone RP5-1189B24 on chromosome Xq25-26.3 Contains the 3' end of the THOC2 gene for THO complex 2, a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa (NDUFA4) pseudogene, a tubulin beta 4 (TUBB4) pseudogene and a fer (fps/fes related) tyrosine kinase (phosphoprotein NCP94) (FER) pseudogene, complete sequence Length = 114784 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 aaaagaaaaaagaaacagtatata 55 ||||||||||||||||||| |||| Sbjct: 91802 aaaagaaaaaagaaacagtctata 91825
>gb|AC090496.28| Mus musculus strain C57BL/6J clone rp23-469n6 map 14, complete sequence Length = 180338 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 22793 agaaaagaaaaaagaaacag 22812
>emb|CR954268.1| Human DNA sequence from clone XX-HCC1954_40B13, complete sequence Length = 107537 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 73107 agaaaagaaaaaagaaacag 73088
>gb|AC016931.21| Homo sapiens 3 BAC RP11-22E12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169032 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctagttctgctgcaaaag 107 |||||||||||||||||||| Sbjct: 87405 ccctagttctgctgcaaaag 87424
>gb|AC155168.3| Mus musculus BAC clone RP23-208M17 from chromosome 10, complete sequence Length = 174112 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 161917 agaaaagaaaaaagaaacag 161898
>gb|BC034228.1| Homo sapiens IQ motif containing F1, mRNA (cDNA clone IMAGE:5266078), complete cds Length = 3424 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 2465 agaaaagaaaaaagaaacag 2484
>gb|AC140121.4| Homo sapiens 12 BAC RP13-86N24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 39373 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 7336 agaaaagaaaaaagaaacag 7355
>gb|AC141002.8| Homo sapiens 3 BAC RP11-572O6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 138981 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 56690 agaaaagaaaaaagaaacag 56709
>gb|AC159460.9| Mus musculus chromosome 15, clone RP24-306N20, complete sequence Length = 184875 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tatacactactacagaaaag 36 |||||||||||||||||||| Sbjct: 179378 tatacactactacagaaaag 179359
>emb|CR938745.1| Human DNA sequence from clone XX-HCC1954_32J13, complete sequence Length = 164033 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 48828 agaaaagaaaaaagaaacag 48809
>emb|CR936885.1| Human DNA sequence from clone XX-HCC1954_35K12, complete sequence Length = 175639 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 76295 agaaaagaaaaaagaaacag 76276
>emb|CR936851.1| Human DNA sequence from clone XX-HCC1954_35H09, complete sequence Length = 138165 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 74386 agaaaagaaaaaagaaacag 74405
>emb|BX927122.16| Zebrafish DNA sequence from clone DKEY-105I14 in linkage group 8, complete sequence Length = 173668 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 aaaagaaaaaagaaacagtatata 55 ||||||||||||||||| |||||| Sbjct: 30556 aaaagaaaaaagaaacattatata 30533
>emb|AL731658.20| Mouse DNA sequence from clone RP23-329P17 on chromosome 11 Contains the Lif gene for leukemia inhibitory factor, two novel genes, the 3' end of a novel gene and a CpG island, complete sequence Length = 137519 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tacagaaaagaaaaaagaaa 46 |||||||||||||||||||| Sbjct: 14549 tacagaaaagaaaaaagaaa 14530
>gb|AC018898.17| Homo sapiens 3 BAC RP11-178K17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170606 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ctttcttttatgtaaaaaga 169 |||||||||||||||||||| Sbjct: 56579 ctttcttttatgtaaaaaga 56560
>gb|AC090844.7| Homo sapiens chromosome 17, clone RP11-387H17, complete sequence Length = 227857 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 91335 agaaaagaaaaaagaaacag 91316
>gb|AC102076.9| Mus musculus chromosome 7, clone RP23-401P12, complete sequence Length = 199219 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 152952 agaaaagaaaaaagaaacag 152971
>gb|BC046633.1| Homo sapiens cDNA clone IMAGE:5288977 Length = 2029 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gaaaagaaaaaagaaacagt 50 |||||||||||||||||||| Sbjct: 485 gaaaagaaaaaagaaacagt 504
>gb|BC066978.1| Homo sapiens cDNA clone IMAGE:4797014 Length = 2024 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gaaaagaaaaaagaaacagt 50 |||||||||||||||||||| Sbjct: 480 gaaaagaaaaaagaaacagt 499
>gb|AC026904.7| Homo sapiens chromosome 8, clone RP11-567J20, complete sequence Length = 175369 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 tggcgaaggtggagcgctct 334 |||||||||||||||||||| Sbjct: 101134 tggcgaaggtggagcgctct 101115
>gb|AY206984.1| Oryza sativa (japonica cultivar-group) serine/threonine protein kinase (DPK4) mRNA, complete cds Length = 1906 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tacagaaaagaaaaaagaaa 46 |||||||||||||||||||| Sbjct: 1533 tacagaaaagaaaaaagaaa 1552
>gb|AC138593.14| Mus musculus chromosome 8, clone RP24-280K15, complete sequence Length = 169176 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 aaagaaacagtatatatgta 59 |||||||||||||||||||| Sbjct: 83868 aaagaaacagtatatatgta 83849
>emb|CR626892.9| Human DNA sequence from clone XX-HCC1954_8D20, complete sequence Length = 61303 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 60694 agaaaagaaaaaagaaacag 60675
>gb|AC104452.2| Homo sapiens chromosome 3 clone RP11-949J7, complete sequence Length = 186563 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 aaaagaaaaaagaaacagtatata 55 ||||||||||||||||| |||||| Sbjct: 123761 aaaagaaaaaagaaacaatatata 123784
>emb|CR589878.6| Human DNA sequence from clone XX-HCC1954_10P22, complete sequence Length = 87071 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 13818 agaaaagaaaaaagaaacag 13799
>gb|AC097636.2| Homo sapiens chromosome 3 clone RP11-314A5, complete sequence Length = 214687 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 24760 agaaaagaaaaaagaaacag 24741
>gb|AC109810.7| Homo sapiens chromosome 11, clone CTD-2537L20, complete sequence Length = 196235 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 132905 agaaaagaaaaaagaaacag 132886
>gb|AC144658.33| Medicago truncatula clone mth2-31g20, complete sequence Length = 119041 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 agatgtacaaagatatcata 80 |||||||||||||||||||| Sbjct: 101026 agatgtacaaagatatcata 101007
>gb|AC097625.11| Homo sapiens X BAC RP11-478H11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194492 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cagaaaagaaaaaagaaaca 48 |||||||||||||||||||| Sbjct: 29423 cagaaaagaaaaaagaaaca 29404
>gb|AC161015.4| Pan troglodytes BAC clone CH251-489I22 from chromosome unknown, complete sequence Length = 186290 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 aaaagaaaaaagaaacagtatata 55 ||||||||||||||||||| |||| Sbjct: 7396 aaaagaaaaaagaaacagtctata 7419
>gb|AC021642.14| Mus musculus chromosome 10 clone RP23-113O5, containing myf5 and myf6, complete sequence Length = 203839 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 138505 agaaaagaaaaaagaaacag 138524
>gb|AC116663.1| Rattus norvegicus, clone RP31-109I17, complete sequence Length = 165658 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tacagaaaagaaaaaagaaa 46 |||||||||||||||||||| Sbjct: 34651 tacagaaaagaaaaaagaaa 34670
>gb|AC005956.4| Arabidopsis thaliana chromosome 2 clone MHK10 map EG05C12, complete sequence Length = 85835 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 607 cagaactcgtcaggggtgaagttgcacaggattctt 642 |||||||| ||||| ||||||||||| || |||||| Sbjct: 13493 cagaactcatcaggagtgaagttgcagagtattctt 13458
>gb|AC002083.2| Human Cosmid g1940a188 from 7q31.3, complete sequence Length = 39608 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaaagaaacagta 51 |||||||||||||||||||| Sbjct: 20378 aaaagaaaaaagaaacagta 20397
>gb|AC079239.6| Homo sapiens BAC clone RP11-722M1 from 4, complete sequence Length = 182406 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tacagaaaagaaaaaagaaa 46 |||||||||||||||||||| Sbjct: 99298 tacagaaaagaaaaaagaaa 99317
>gb|AC018795.10| Homo sapiens chromosome 11, clone RP11-699C18, complete sequence Length = 187836 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacagtata 53 ||||| |||||||||||||||||| Sbjct: 30811 agaaaggaaaaaagaaacagtata 30788
>dbj|AK220684.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-85-G09 Length = 3032 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 607 cagaactcgtcaggggtgaagttgcacaggattctt 642 |||||||| ||||| ||||||||||| || |||||| Sbjct: 2596 cagaactcatcaggagtgaagttgcagagtattctt 2561
>emb|AJ549502.2|HSA549502 Homo sapiens peptidylarginine deiminase gene locus (PADI12346 genes) Length = 355060 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 8638 agaaaagaaaaaagaaacag 8619
>gb|AF214658.1|AF214658 Mus musculus alpha(1,2)fucosyltransferase SEC1 (Sec1) gene, complete cds Length = 5357 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 164 agaaaagaaaaaagaaacag 183
>gb|AF214657.1|AF214657 Mus musculus strain 129/Ola alpha(1,2)fucosyltransferase SEC1 (Sec1) gene, complete cds Length = 4705 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 104 agaaaagaaaaaagaaacag 123
>emb|BX640584.10| Zebrafish DNA sequence from clone DKEY-78O7 in linkage group 14, complete sequence Length = 265520 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 aaaagaaaaaagaaacagtatata 55 ||||||||||||||||| |||||| Sbjct: 44506 aaaagaaaaaagaaacattatata 44529 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 aaaagaaaaaagaaacagtatata 55 ||||||||||||||||| |||||| Sbjct: 35806 aaaagaaaaaagaaacattatata 35829
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cagaaaagaaaaaagaaaca 48 |||||||||||||||||||| Sbjct: 13503257 cagaaaagaaaaaagaaaca 13503238
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tacagaaaagaaaaaagaaa 46 |||||||||||||||||||| Sbjct: 27002717 tacagaaaagaaaaaagaaa 27002736
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gctcgaacctcgcgttctcc 267 |||||||||||||||||||| Sbjct: 8030622 gctcgaacctcgcgttctcc 8030641
>ref|XM_623925.1| PREDICTED: Apis mellifera similar to CG5931-PA (LOC551530), mRNA Length = 5892 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 453 agaaaagaaaaaagaaacag 472
>gb|AC084214.19|AC084214 Mus musculus X BAC RP23-382J5 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 56321 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tacagaaaagaaaaaagaaa 46 |||||||||||||||||||| Sbjct: 18364 tacagaaaagaaaaaagaaa 18383
>gb|AC084277.3| Homo sapiens BAC clone RP11-68O1 from 4, complete sequence Length = 150705 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 aaccctttcttttatgtaaaaaga 169 |||||| ||||||||||||||||| Sbjct: 92353 aaccctctcttttatgtaaaaaga 92330
>gb|AC109614.9| Mus musculus chromosome 5, clone RP23-107M21, complete sequence Length = 194308 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tacagaaaagaaaaaagaaa 46 |||||||||||||||||||| Sbjct: 44734 tacagaaaagaaaaaagaaa 44715
>gb|AC154307.2| Mus musculus BAC clone RP23-377C12 from chromosome 9, complete sequence Length = 186985 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acagaaaagaaaaaagaaac 47 |||||||||||||||||||| Sbjct: 112318 acagaaaagaaaaaagaaac 112337
>gb|AC011518.6|AC011518 Homo sapiens chromosome 19 clone LLNLF-189G12, complete sequence Length = 39344 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 19608 agaaaagaaaaaagaaacag 19627
>gb|AC084457.1|AC084457 Caenorhabditis briggsae cosmid CB032B18, complete sequence Length = 72221 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cagaaaagaaaaaagaaaca 48 |||||||||||||||||||| Sbjct: 16783 cagaaaagaaaaaagaaaca 16802
>ref|NM_031631.2| Rattus norvegicus vesicle-associated membrane protein, associated protein a (Vapa), mRNA Length = 1618 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 1019 agaaaagaaaaaagaaacag 1000
>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10, complete sequence Length = 143298 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gctcgaacctcgcgttctcc 267 |||||||||||||||||||| Sbjct: 100150 gctcgaacctcgcgttctcc 100169
>gb|AE014844.1| Plasmodium falciparum 3D7 chromosome 12, section 1 of 9 of the complete sequence Length = 251551 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 32 aaaagaaaaaagaaacagtatatatgta 59 ||||||||||||||| | |||||||||| Sbjct: 209415 aaaagaaaaaagaaaaaatatatatgta 209388
>gb|AC090962.33| Mus musculus strain C57BL/6J chromosome 14 clone rp23-124m15, complete sequence Length = 171568 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 11354 agaaaagaaaaaagaaacag 11335
>gb|AC092408.3| Papio anubis clone RP41-446H8, complete sequence Length = 184036 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acagaaaagaaaaaagaaac 47 |||||||||||||||||||| Sbjct: 19481 acagaaaagaaaaaagaaac 19462
>gb|AY085040.1| Arabidopsis thaliana clone 125386 mRNA, complete sequence Length = 732 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 607 cagaactcgtcaggggtgaagttgcacaggattctt 642 |||||||| ||||| ||||||||||| || |||||| Sbjct: 263 cagaactcatcaggagtgaagttgcagagtattctt 228
>gb|AC010636.6|AC010636 Homo sapiens chromosome 19 clone CTD-2332E11, complete sequence Length = 179393 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ctactacagaaaagaaaaaagaaa 46 ||||||||||||| |||||||||| Sbjct: 100599 ctactacagaaaaaaaaaaagaaa 100622
>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0521F09 Length = 164823 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaaaaagaaacagtatatat 56 |||||||||||||||||||| Sbjct: 115936 aaaaaagaaacagtatatat 115955
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tacagaaaagaaaaaagaaa 46 |||||||||||||||||||| Sbjct: 126478 tacagaaaagaaaaaagaaa 126497
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cagaaaagaaaaaagaaaca 48 |||||||||||||||||||| Sbjct: 82940 cagaaaagaaaaaagaaaca 82921
>gb|BC061875.1| Rattus norvegicus vesicle-associated membrane protein, associated protein a, mRNA (cDNA clone MGC:72396 IMAGE:5598274), complete cds Length = 1618 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 1019 agaaaagaaaaaagaaacag 1000
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaaaaagaaacagtatatat 56 |||||||||||||||||||| Sbjct: 9667 aaaaaagaaacagtatatat 9686
>emb|AL670220.8| Mouse DNA sequence from clone RP23-260P9 on chromosome X, complete sequence Length = 180488 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aaaaaagaaacagtatatat 56 |||||||||||||||||||| Sbjct: 58958 aaaaaagaaacagtatatat 58939
>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1127C04 Length = 121441 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atacactactacagaaaaga 37 |||||||||||||||||||| Sbjct: 34961 atacactactacagaaaaga 34980
>dbj|AK121201.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087I11, full insert sequence Length = 2085 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tacagaaaagaaaaaagaaa 46 |||||||||||||||||||| Sbjct: 1597 tacagaaaagaaaaaagaaa 1616
>dbj|AK112024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B08, full insert sequence Length = 715 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tacagaaaagaaaaaagaaa 46 |||||||||||||||||||| Sbjct: 317 tacagaaaagaaaaaagaaa 336
>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0005C03 Length = 166423 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 atacactactacagaaaaga 37 |||||||||||||||||||| Sbjct: 142306 atacactactacagaaaaga 142325
>gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 sequence, complete sequence Length = 141984 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaaagaaacagta 51 |||||||||||||||||||| Sbjct: 67348 aaaagaaaaaagaaacagta 67367
>emb|AL049872.3|CNS0000R Human chromosome 14 DNA sequence BAC R-529H20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 172674 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 129298 agaaaagaaaaaagaaacag 129279
>gb|AC083910.9| Mus musculus 1 BAC RP23-337F12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208408 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 134345 agaaaagaaaaaagaaacag 134364
>gb|AC025500.8| Mus musculus chromosome 9, clone RP23-47M24, complete sequence Length = 112924 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 101518 agaaaagaaaaaagaaacag 101537
>dbj|AP003421.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-951E24, complete sequence Length = 114999 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acagaaaagaaaaaagaaac 47 |||||||||||||||||||| Sbjct: 55365 acagaaaagaaaaaagaaac 55346
>gb|AC100386.29| Mus musculus chromosome 10, clone RP23-132J19, complete sequence Length = 216928 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaaagaaacagta 51 |||||||||||||||||||| Sbjct: 122575 aaaagaaaaaagaaacagta 122556
>gb|AC103378.21| Mus musculus chromosome 8, clone RP24-231N10, complete sequence Length = 191479 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 aaagaaacagtatatatgta 59 |||||||||||||||||||| Sbjct: 173056 aaagaaacagtatatatgta 173037
>emb|AL806514.8| Mouse DNA sequence from clone RP23-18D24 on chromosome 2, complete sequence Length = 206358 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tatgtagagatgtacaaaga 73 |||||||||||||||||||| Sbjct: 114242 tatgtagagatgtacaaaga 114223
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 102115 agaaaagaaaaaagaaacag 102096
>emb|AL805900.10| Mouse DNA sequence from clone RP23-85B14 on chromosome 4, complete sequence Length = 103933 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 64495 agaaaagaaaaaagaaacag 64476
>emb|CT030641.11| Mouse DNA sequence from clone RP23-32M15 on chromosome 16, complete sequence Length = 224292 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 97110 agaaaagaaaaaagaaacag 97129
>gb|AC130213.3| Mus musculus BAC clone RP24-68J20 from 8, complete sequence Length = 188287 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cagaaaagaaaaaagaaaca 48 |||||||||||||||||||| Sbjct: 12727 cagaaaagaaaaaagaaaca 12746
>gb|AC113317.8| Mus musculus chromosome 5, clone RP23-442G8, complete sequence Length = 193961 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 aaagaaaaaagaaacagtatatat 56 |||||||||| ||||||||||||| Sbjct: 87201 aaagaaaaaaaaaacagtatatat 87224
>gb|AC149327.2| Phakopsora pachyrhizi clone JGIAFNA-13C15, complete sequence Length = 42593 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 1339 agaaaagaaaaaagaaacag 1320
>emb|AL772342.12| Mouse DNA sequence from clone RP23-105D19 on chromosome 2, complete sequence Length = 206806 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 91537 agaaaagaaaaaagaaacag 91518
>dbj|AP006427.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45A23, TM0318, complete sequence Length = 117676 Score = 40.1 bits (20), Expect = 9.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 598 ggatcggggcagaactcgtcaggggtgaagttgcacagga 637 ||||| || |||||||| || |||||||||||||| |||| Sbjct: 9223 ggatctggacagaactcatccggggtgaagttgcagagga 9184
>emb|AL354805.23| Mouse DNA sequence from clone RP21-544J17 on chromosome 5, complete sequence Length = 103922 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tacagaaaagaaaaaagaaa 46 |||||||||||||||||||| Sbjct: 77236 tacagaaaagaaaaaagaaa 77217
>gb|AC155337.1| Brassica rapa subsp. pekinensis clone KBrH117N09, complete sequence Length = 125390 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 607 cagaactcgtcaggggtgaagttgcacaggattctt 642 |||||||| ||||| ||||||||||| || |||||| Sbjct: 87988 cagaactcatcaggagtgaagttgcatagtattctt 87953
>emb|AL604023.12| Mouse DNA sequence from clone RP23-468D17 on chromosome 11, complete sequence Length = 225399 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctgctgcaaaagcaactt 113 |||||||||||||||||||| Sbjct: 6461 ttctgctgcaaaagcaactt 6480
>gb|U16176.1|ATU16176 Arabidopsis thaliana protein kinase (AFC1) mRNA, complete cds Length = 1732 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 1580 agaaaagaaaaaagaaacag 1599
>dbj|D45354.1|ATHPKAME2B Arabidopsis thaliana AME2 mRNA for protein kinase, complete cds Length = 1716 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agaaaagaaaaaagaaacag 49 |||||||||||||||||||| Sbjct: 1560 agaaaagaaaaaagaaacag 1579
>emb|AL731727.18| Mouse DNA sequence from clone RP23-147K15 on chromosome X, complete sequence Length = 64392 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tacagaaaagaaaaaagaaa 46 |||||||||||||||||||| Sbjct: 39758 tacagaaaagaaaaaagaaa 39739
>emb|AL772406.4| Mouse DNA sequence from clone RP23-321K16 on chromosome 4, complete sequence Length = 151744 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 18 atacactactacagaaaagaaaaaagaa 45 ||||||||||||| |||| ||||||||| Sbjct: 105340 atacactactacaaaaaaaaaaaaagaa 105313
>emb|AL627185.10| Mouse DNA sequence from clone RP23-332E2 on chromosome 4, complete sequence Length = 120180 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 actactacagaaaagaaaaaagaa 45 |||||||| ||||||||||||||| Sbjct: 92488 actactactgaaaagaaaaaagaa 92465 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,090,299 Number of Sequences: 3902068 Number of extensions: 7090299 Number of successful extensions: 235564 Number of sequences better than 10.0: 164 Number of HSP's better than 10.0 without gapping: 166 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 234086 Number of HSP's gapped (non-prelim): 1470 length of query: 660 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 637 effective length of database: 17,143,297,704 effective search space: 10920280637448 effective search space used: 10920280637448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
